J Bacteriol. 1981 March; 145(3): 1365-1373
Rapid procedure for detection and isolation of large and small plasmids.
C I Kado and
S T Liu
ABSTRACT
Procedures are described for the detection and isolation of plasmids of various sizes (2.6 to 350 megadaltons) that are harbored in species of Agrobacterium, Rhizobium, Escherichia, Salmonella, Erwinia, Pseudomonas, and Xanthomonas. The method utilized the molecular characteristics of covalently closed circular deoxyribonucleic acid (DNA) that is released from cells under conditions that denature chromosomal DNA by using alkaline sodium dodecyl sulfate (pH 12.6) at elevated temperatures. Proteins and cell debris were removed by extraction with phenol-chloroform. Under these conditions chromosomal DNA concentrations were reduced or eliminated. The clarified extract was used directly for electrophoretic analysis. These procedures also permitted the selective isolation of plasmid DNA that can be used directly in nick translation, restriction endonuclease analysis, transformation, and DNA cloning experiments.
J Bacteriol. 1981 March; 145(3): 1365-1373
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(2004). Acquisition of an Agrobacterium Ri Plasmid and Pathogenicity by Other {alpha}-Proteobacteria in Cucumber and Tomato Crops Affected by Root Mat. Appl. Environ. Microbiol.
70: 2779-2785
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Eckert, C., Gautier, V., Saladin-Allard, M., Hidri, N., Verdet, C., Ould-Hocine, Z., Barnaud, G., Delisle, F., Rossier, A., Lambert, T., Philippon, A., Arlet, G.
(2004). Dissemination of CTX-M-Type {beta}-Lactamases among Clinical Isolates of Enterobacteriaceae in Paris, France. Antimicrob. Agents Chemother.
48: 1249-1255
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Chang, L.-L., Chen, H.-F., Chang, C.-Y., Lee, T.-M., Wu, W.-J.
(2004). Contribution of integrons, and SmeABC and SmeDEF efflux pumps to multidrug resistance in clinical isolates of Stenotrophomonas maltophilia. J Antimicrob Chemother
53: 518-521
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Doi, Y., Yokoyama, K., Yamane, K., Wachino, J.-i., Shibata, N., Yagi, T., Shibayama, K., Kato, H., Arakawa, Y.
(2004). Plasmid-Mediated 16S rRNA Methylase in Serratia marcescens Conferring High-Level Resistance to Aminoglycosides. Antimicrob. Agents Chemother.
48: 491-496
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Walckenaer, E., Poirel, L., Leflon-Guibout, V., Nordmann, P., Nicolas-Chanoine, M.-H.
(2004). Genetic and Biochemical Characterization of the Chromosomal Class A {beta}-Lactamases of Raoultella (formerly Klebsiella) planticola and Raoultella ornithinolytica. Antimicrob. Agents Chemother.
48: 305-312
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Broker, D., Arenskotter, M., Legatzki, A., Nies, D. H., Steinbuchel, A.
(2004). Characterization of the 101-Kilobase-Pair Megaplasmid pKB1, Isolated from the Rubber-Degrading Bacterium Gordonia westfalica Kb1. J. Bacteriol.
186: 212-225
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Nagano, N., Shibata, N., Saitou, Y., Nagano, Y., Arakawa, Y.
(2003). Nosocomial Outbreak of Infections by Proteus mirabilis That Produces Extended-Spectrum CTX-M-2 Type {beta}-Lactamase. J. Clin. Microbiol.
41: 5530-5536
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Miko, A., Pries, K., Schroeter, A., Helmuth, R.
(2003). Multiple-Drug Resistance in D-Tartrate-Positive Salmonella enterica Serovar Paratyphi B Isolates from Poultry Is Mediated by Class 2 Integrons Inserted into the Bacterial Chromosome. Antimicrob. Agents Chemother.
47: 3640-3643
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Talukder, K. A., Islam, M. A., Khajanchi, B. K., Dutta, D. K., Islam, Z., Safa, A., Alam, K., Hossain, A., Nair, G. B., Sack, D. A.
(2003). Temporal Shifts in the Dominance of Serotypes of Shigella dysenteriae from 1999 to 2002 in Dhaka, Bangladesh. J. Clin. Microbiol.
41: 5053-5058
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Wu, T.-L., Chia, J.-H., Su, L.-H., Kuo, A.-J., Chu, C., Chiu, C.-H.
(2003). Dissemination of Extended-Spectrum {beta}-Lactamase-Producing Enterobacteriaceae in Pediatric Intensive Care Units. J. Clin. Microbiol.
41: 4836-4838
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Capilla, S., Goni, P., Rubio, M. C., Castillo, J., Millan, L., Cerda, P., Sahagun, J., Pitart, C., Beltran, A., Gomez-Lus, R.
(2003). Epidemiological Study of Resistance to Nalidixic Acid and Other Antibiotics in Clinical Yersinia enterocolitica O:3 Isolates. J. Clin. Microbiol.
41: 4876-4878
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Strauch, E., Goelz, G., Knabner, D., Konietzny, A., Lanka, E., Appel, B.
(2003). A cryptic plasmid of Yersinia enterocolitica encodes a conjugative transfer system related to the regions of CloDF13 Mob and IncX Pil. Microbiology
149: 2829-2845
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Wain, J., Diem Nga, L. T., Kidgell, C., James, K., Fortune, S., Song Diep, T., Ali, T., O Gaora, P., Parry, C., Parkhill, J., Farrar, J., White, N. J., Dougan, G.
(2003). Molecular Analysis of incHI1 Antimicrobial Resistance Plasmids from Salmonella Serovar Typhi Strains Associated with Typhoid Fever. Antimicrob. Agents Chemother.
47: 2732-2739
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Furushita, M., Shiba, T., Maeda, T., Yahata, M., Kaneoka, A., Takahashi, Y., Torii, K., Hasegawa, T., Ohta, M.
(2003). Similarity of Tetracycline Resistance Genes Isolated from Fish Farm Bacteria to Those from Clinical Isolates. Appl. Environ. Microbiol.
69: 5336-5342
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Kristiansen, M. A. M., Sandvang, D., Rasmussen, T. B.
(2003). In Vivo Development of Quinolone Resistance in Salmonella enterica Serotype Typhimurium DT104. J. Clin. Microbiol.
41: 4462-4464
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Morris, D., O'Hare, C., Glennon, M., Maher, M., Corbett-Feeney, G., Cormican, M.
(2003). Extended-Spectrum {beta}-Lactamases in Ireland, Including a Novel Enzyme, TEM-102. Antimicrob. Agents Chemother.
47: 2572-2578
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Beauchef-Havard, A., Arlet, G., Gautier, V., Labia, R., Grimont, P., Philippon, A.
(2003). Molecular and Biochemical Characterization of a Novel Class A {beta}-Lactamase (HER-1) from Escherichia hermannii. Antimicrob. Agents Chemother.
47: 2669-2673
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Siu, L. K., Lu, P.-L., Chen, J.-Y., Lin, F. M., Chang, S.-C.
(2003). High-Level Expression of AmpC {beta}-Lactamase Due to Insertion of Nucleotides between -10 and -35 Promoter Sequences in Escherichia coli Clinical Isolates: Cases Not Responsive to Extended-Spectrum-Cephalosporin Treatment. Antimicrob. Agents Chemother.
47: 2138-2144
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Preston, K. E., Graffunder, E. M., Evans, A. M., Venezia, R. A.
(2003). Survey of Plasmid-Associated Genetic Markers in Enterobacteriaceae with Reduced Susceptibilities to Cephalosporins. Antimicrob. Agents Chemother.
47: 2179-2185
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