Previous Article | Next Article 
Journal of Bacteriology, October 1998, p. 5344-5350, Vol. 180, No. 20
0021-9193/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Nitrogen and Oxygen Regulation of Bacillus
subtilis nasDEF Encoding NADH-Dependent Nitrite Reductase by
TnrA and ResDE
Michiko M.
Nakano,1,*
Tamara
Hoffmann,2,3
Yi
Zhu,1,
and
Dieter
Jahn2
Department of Biochemistry and Molecular
Biology, Louisiana State University Medical Center, Shreveport,
Louisiana 71130-3932,1 and
Institut
für Organische Chemie und Biochemie,
Albert-Ludwigs-Universität Freiburg, 79104 Freiburg,2 and
Max-Planck-Institut
für Terrestrische Mikrobiologie, 35043 Marburg,3 Germany
Received 29 May 1998/Accepted 11 August 1998
The nitrate and nitrite reductases of Bacillus subtilis
have two different physiological functions. Under conditions of
nitrogen limitation, these enzymes catalyze the reduction of nitrate
via nitrite to ammonia for the anabolic incorporation of nitrogen into
biomolecules. They also function catabolically in anaerobic respiration, which involves the use of nitrate and nitrite as terminal
electron acceptors. Two distinct nitrate reductases, encoded by
narGHI and nasBC, function in anabolic and
catabolic nitrogen metabolism, respectively. However, as reported
herein, a single NADH-dependent, soluble nitrite reductase encoded by the nasDE genes is required for both catabolic and anabolic
processes. The nasDE genes, together with nasBC
(encoding assimilatory nitrate reductase) and nasF
(required for nitrite reductase siroheme cofactor formation),
constitute the nas operon. Data presented show that transcription of nasDEF is driven not only by the
previously characterized nas operon promoter but also from
an internal promoter residing between the nasC and
nasD genes. Transcription from both promoters is activated
by nitrogen limitation during aerobic growth by the nitrogen
regulator, TnrA. However, under conditions of oxygen limitation,
nasDEF expression and nitrite reductase activity were significantly induced. Anaerobic induction of nasDEF
required the ResDE two-component regulatory system and the presence of nitrite, indicating partial coregulation of NasDEF with the respiratory nitrate reductase NarGHI during nitrate respiration.
*
Corresponding author. Present address: Department of
Biochemistry and Molecular Biology, Oregon Graduate Institute of
Science and Technology, P.O. Box 91000, Portland, OR 97291-1000. Phone: (503) 748-1070. Fax: (503) 748-1464. E-mail:
mnakano{at}bmb.ogi.edu.
Present address: Department of Biochemistry and Molecular Biology,
Oregon Graduate Institute of Science and Technology, Portland, OR
97291-1000.
Journal of Bacteriology, October 1998, p. 5344-5350, Vol. 180, No. 20
0021-9193/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Kayumov, A., Heinrich, A., Sharipova, M., Iljinskaya, O., Forchhammer, K.
(2008). Inactivation of the general transcription factor TnrA in Bacillus subtilis by proteolysis. Microbiology
154: 2348-2355
[Abstract]
[Full Text]
-
Geng, H., Zhu, Y., Mullen, K., Zuber, C. S., Nakano, M. M.
(2007). Characterization of ResDE-Dependent fnr Transcription in Bacillus subtilis. J. Bacteriol.
189: 1745-1755
[Abstract]
[Full Text]
-
Di Giacomo, M., Paolino, M., Silvestro, D., Vigliotta, G., Imperi, F., Visca, P., Alifano, P., Parente, D.
(2007). Microbial Community Structure and Dynamics of Dark Fire-Cured Tobacco Fermentation. Appl. Environ. Microbiol.
73: 825-837
[Abstract]
[Full Text]
-
Thomaides, H. B., Davison, E. J., Burston, L., Johnson, H., Brown, D. R., Hunt, A. C., Errington, J., Czaplewski, L.
(2007). Essential Bacterial Functions Encoded by Gene Pairs. J. Bacteriol.
189: 591-602
[Abstract]
[Full Text]
-
Wray, L. V. Jr., Fisher, S. H.
(2007). Functional Analysis of the Carboxy-Terminal Region of Bacillus subtilis TnrA, a MerR Family Protein. J. Bacteriol.
189: 20-27
[Abstract]
[Full Text]
-
Heinrich, A., Woyda, K., Brauburger, K., Meiss, G., Detsch, C., Stulke, J., Forchhammer, K.
(2006). Interaction of the Membrane-bound GlnK-AmtB Complex with the Master Regulator of Nitrogen Metabolism TnrA in Bacillus subtilis. J. Biol. Chem.
281: 34909-34917
[Abstract]
[Full Text]
-
Kloosterman, T. G., Hendriksen, W. T., Bijlsma, J. J. E., Bootsma, H. J., van Hijum, S. A. F. T., Kok, J., Hermans, P. W. M., Kuipers, O. P.
(2006). Regulation of Glutamine and Glutamate Metabolism by GlnR and GlnA in Streptococcus pneumoniae. J. Biol. Chem.
281: 25097-25109
[Abstract]
[Full Text]
-
Hartig, E., Hartmann, A., Schatzle, M., Albertini, A. M., Jahn, D.
(2006). The Bacillus subtilis nrdEF Genes, Encoding a Class Ib Ribonucleotide Reductase, Are Essential for Aerobic and Anaerobic Growth. Appl. Environ. Microbiol.
72: 5260-5265
[Abstract]
[Full Text]
-
Nakano, M. M., Geng, H., Nakano, S., Kobayashi, K.
(2006). The Nitric Oxide-Responsive Regulator NsrR Controls ResDE-Dependent Gene Expression.. J. Bacteriol.
188: 5878-5887
[Abstract]
[Full Text]
-
Larsen, R., Kloosterman, T. G., Kok, J., Kuipers, O. P.
(2006). GlnR-Mediated Regulation of Nitrogen Metabolism in Lactococcus lactis. J. Bacteriol.
188: 4978-4982
[Abstract]
[Full Text]
-
Zalieckas, J. M., Wray, L. V. Jr., Fisher, S. H.
(2006). Cross-Regulation of the Bacillus subtilis glnRA and tnrA Genes Provides Evidence for DNA Binding Site Discrimination by GlnR and TnrA.. J. Bacteriol.
188: 2578-2585
[Abstract]
[Full Text]
-
Hartig, E., Geng, H., Hartmann, A., Hubacek, A., Munch, R., Ye, R. W., Jahn, D., Nakano, M. M.
(2004). Bacillus subtilis ResD Induces Expression of the Potential Regulatory Genes yclJK upon Oxygen Limitation. J. Bacteriol.
186: 6477-6484
[Abstract]
[Full Text]
-
Schau, M., Chen, Y., Hulett, F. M.
(2004). Bacillus subtilis YdiH Is a Direct Negative Regulator of the cydABCD Operon. J. Bacteriol.
186: 4585-4595
[Abstract]
[Full Text]
-
Geng, H., Nakano, S., Nakano, M. M.
(2004). Transcriptional Activation by Bacillus subtilis ResD: Tandem Binding to Target Elements and Phosphorylation-Dependent and -Independent Transcriptional Activation. J. Bacteriol.
186: 2028-2037
[Abstract]
[Full Text]
-
Nakano, M. M.
(2002). Induction of ResDE-Dependent Gene Expression in Bacillus subtilis in Response to Nitric Oxide and Nitrosative Stress. J. Bacteriol.
184: 1783-1787
[Abstract]
[Full Text]
-
Marino, M., Ramos, H. C., Hoffmann, T., Glaser, P., Jahn, D.
(2001). Modulation of Anaerobic Energy Metabolism of Bacillus subtilis by arfM (ywiD). J. Bacteriol.
183: 6815-6821
[Abstract]
[Full Text]
-
Nakano, M. M., Zhu, Y.
(2001). Involvement of ResE Phosphatase Activity in Down-Regulation of ResD-Controlled Genes in Bacillus subtilis during Aerobic Growth. J. Bacteriol.
183: 1938-1944
[Abstract]
[Full Text]
-
Koretke, K. K., Lupas, A. N., Warren, P. V., Rosenberg, M., Brown, J. R.
(2000). Evolution of Two-Component Signal Transduction. Mol Biol Evol
17: 1956-1970
[Abstract]
[Full Text]
-
Belitsky, B. R., Wray, L. V. Jr., Fisher, S. H., Bohannon, D. E., Sonenshein, A. L.
(2000). Role of TnrA in Nitrogen Source-Dependent Repression of Bacillus subtilis Glutamate Synthase Gene Expression. J. Bacteriol.
182: 5939-5947
[Abstract]
[Full Text]
-
Ye, R. W., Tao, W., Bedzyk, L., Young, T., Chen, M., Li, L.
(2000). Global Gene Expression Profiles of Bacillus subtilis Grown under Anaerobic Conditions. J. Bacteriol.
182: 4458-4465
[Abstract]
[Full Text]
-
Cruz Ramos, H., Hoffmann, T., Marino, M., Nedjari, H., Presecan-Siedel, E., Dreesen, O., Glaser, P., Jahn, D.
(2000). Fermentative Metabolism of Bacillus subtilis: Physiology and Regulation of Gene Expression. J. Bacteriol.
182: 3072-3080
[Abstract]
[Full Text]
-
Zheng, G., Hehn, R., Zuber, P.
(2000). Mutational Analysis of the sbo-alb Locus of Bacillus subtilis: Identification of Genes Required for Subtilosin Production and Immunity. J. Bacteriol.
182: 3266-3273
[Abstract]
[Full Text]
-
Nakano, M. M., Zheng, G., Zuber, P.
(2000). Dual Control of sbo-alb Operon Expression by the Spo0 and ResDE Systems of Signal Transduction under Anaerobic Conditions in Bacillus subtilis. J. Bacteriol.
182: 3274-3277
[Abstract]
[Full Text]
-
Robichon, D., Arnaud, M., Gardan, R., Pragai, Z., O'Reilly, M., Rapoport, G., Débarbouillé, M.
(2000). Expression of a New Operon from Bacillus subtilis, ykzB-ykoL, under the Control of the TnrA and PhoP-PhoR Global Regulators. J. Bacteriol.
182: 1226-1231
[Abstract]
[Full Text]
-
Marino, M., Hoffmann, T., Schmid, R., Möbitz, H., Jahn, D.
(2000). Changes in protein synthesis during the adaptation of Bacillus subtilis to anaerobic growth conditions. Microbiology
146: 97-105
[Abstract]
[Full Text]
-
Nakano, M. M., Zhu, Y., Haga, K., Yoshikawa, H., Sonenshein, A. L., Zuber, P.
(1999). A Mutation in the 3-Phosphoglycerate Kinase Gene Allows Anaerobic Growth of Bacillus subtilis in the Absence of ResE Kinase. J. Bacteriol.
181: 7087-7097
[Abstract]
[Full Text]
-
Moreno-Vivián, C., Cabello, P., Martínez-Luque, M., Blasco, R., Castillo, F.
(1999). Prokaryotic Nitrate Reduction: Molecular Properties and Functional Distinction among Bacterial Nitrate Reductases. J. Bacteriol.
181: 6573-6584
[Full Text]
-
Homuth, G., Rompf, A., Schumann, W., Jahn, D.
(1999). Transcriptional Control of Bacillus subtilis hemN and hemZ. J. Bacteriol.
181: 5922-5929
[Abstract]
[Full Text]