Previous Article | Next Article 
Journal of Bacteriology, August 1999, p. 4611-4616, Vol. 181, No. 15
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Functional Analysis of the Carbohydrate-Binding
Domains of Erwinia chrysanthemi Cel5 (Endoglucanase Z) and
an Escherichia coli Putative Chitinase
Helen D.
Simpson and
Frederic
Barras*
Laboratoire de Chimie Bacterienne, Centre
National de la Recherche Scientifique, 13402 Marseille Cedex 20, France
Received 15 March 1999/Accepted 26 May 1999
The Cel5 cellulase (formerly known as endoglucanase Z) from
Erwinia chrysanthemi is a multidomain enzyme consisting of
a catalytic domain, a linker region, and a cellulose binding domain
(CBD). A three-dimensional structure of the CBDCel5 has
previously been obtained by nuclear magnetic resonance. In order to
define the role of individual residues in cellulose binding,
site-directed mutagenesis was performed. The role of three aromatic
residues (Trp18, Trp43, and Tyr44) in cellulose binding was
demonstrated. The exposed potential hydrogen bond donors, residues
Gln22 and Glu27, appeared not to play a role in cellulose binding,
whereas residue Asp17 was found to be important for the stability of
Cel5. A deletion mutant lacking the residues Asp17 to Pro23 bound only weakly to cellulose. The sequence of CBDCel5 exhibits
homology to a series of five repeating domains of a putative large
protein, referred to as Yheb, from Escherichia coli. One of
the repeating domains (Yheb1), consisting of 67 amino acids, was cloned
from the E. coli chromosome and purified by metal chelating
chromatography. While CBDCel5 bound to both cellulose and
chitin, Yheb1 bound well to chitin, but only very poorly to cellulose.
The Yheb protein contains a region that exhibits sequence homology with
the catalytic domain of a chitinase, which is consistent with the
hypothesis that the Yheb protein is a chitinase.
*
Corresponding author. Mailing address: LCB-CNRS, 31 Chemin Joseph Aiguier, 13402 Marseille Cedex 20, France. Phone: (33)
49116-4579. Fax: (33) 49171-8914. E-mail:
barras{at}ibsm.cnrs-mrs.fr.
Journal of Bacteriology, August 1999, p. 4611-4616, Vol. 181, No. 15
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Akagi, K.-i., Watanabe, J., Hara, M., Kezuka, Y., Chikaishi, E., Yamaguchi, T., Akutsu, H., Nonaka, T., Watanabe, T., Ikegami, T.
(2006). Identification of the Substrate Interaction Region of the Chitin-Binding Domain of Streptomyces griseus Chitinase C.. J Biochem
139: 483-493
[Abstract]
[Full Text]
-
Flint, J., Bolam, D. N., Nurizzo, D., Taylor, E. J., Williamson, M. P., Walters, C., Davies, G. J., Gilbert, H. J.
(2005). Probing the Mechanism of Ligand Recognition in Family 29 Carbohydrate-binding Modules. J. Biol. Chem.
280: 23718-23726
[Abstract]
[Full Text]
-
Kojima, M., Yoshikawa, T., Ueda, M., Nonomura, T., Matsuda, Y., Toyoda, H., Miyatake, K., Arai, M., Fukamizo, T.
(2005). Family 19 Chitinase from Aeromonas sp. No.10S-24: Role of Chitin-Binding Domain in the Enzymatic Activity. J Biochem
137: 235-242
[Abstract]
[Full Text]
-
Katouno, F., Taguchi, M., Sakurai, K., Uchiyama, T., Nikaidou, N., Nonaka, T., Sugiyama, J., Watanabe, T.
(2004). Importance of Exposed Aromatic Residues in Chitinase B from Serratia marcescens 2170 for Crystalline Chitin Hydrolysis. J Biochem
136: 163-168
[Abstract]
[Full Text]
-
Cicortas Gunnarsson, L., Nordberg Karlsson, E., Albrekt, A.-S., Andersson, M., Holst, O., Ohlin, M.
(2004). A carbohydrate binding module as a diversity-carrying scaffold. Protein Eng Des Sel
17: 213-221
[Abstract]
[Full Text]
-
Tsujibo, H., Kubota, T., Yamamoto, M., Miyamoto, K., Inamori, Y.
(2003). Characterization of Chitinase Genes from an Alkaliphilic Actinomycete, Nocardiopsis prasina OPC-131. Appl. Environ. Microbiol.
69: 894-900
[Abstract]
[Full Text]
-
McLean, B. W., Bray, M. R., Boraston, A. B., Gilkes, N. R., Haynes, C. A., Kilburn, D. G.
(2000). Analysis of binding of the family 2a carbohydrate-binding module from Cellulomonas fimi xylanase 10A to cellulose: specificity and identification of functionally important amino acid residues. Protein Eng Des Sel
13: 801-809
[Abstract]
[Full Text]
-
Voulhoux, R., Taupiac, M.-P., Czjzek, M., Beaumelle, B., Filloux, A.
(2000). Influence of Deletions within Domain II of Exotoxin A on Its Extracellular Secretion from Pseudomonas aeruginosa. J. Bacteriol.
182: 4051-4058
[Abstract]
[Full Text]
-
van Aalten, D. M. F., Synstad, B., Brurberg, M. B., Hough, E., Riise, B. W., Eijsink, V. G. H., Wierenga, R. K.
(2000). Structure of a two-domain chitotriosidase from Serratia marcescens at 1.9-A resolution. Proc. Natl. Acad. Sci. USA
97: 5842-5847
[Abstract]
[Full Text]
-
Ikegami, T., Okada, T., Hashimoto, M., Seino, S., Watanabe, T., Shirakawa, M.
(2000). Solution Structure of the Chitin-binding Domain of Bacillus circulans WL-12 Chitinase A1. J. Biol. Chem.
275: 13654-13661
[Abstract]
[Full Text]
-
Uchiyama, T., Katouno, F., Nikaidou, N., Nonaka, T., Sugiyama, J., Watanabe, T.
(2001). Roles of the Exposed Aromatic Residues in Crystalline Chitin Hydrolysis by Chitinase A from Serratia marcescens 2170. J. Biol. Chem.
276: 41343-41349
[Abstract]
[Full Text]