Journal of Bacteriology, August 1999, p. 5051-5059, Vol. 181, No. 16
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
-Ketolase from Pseudomonas
putida, Acetopyruvate Hydrolase
Institute of
Biotechnology1 and Institute of Organic
Chemistry,
Received 13 November 1998/Accepted 25 May 1999
A revised purification of acetopyruvate hydrolase from
orcinol-grown Pseudomonas putida ORC is described. This
carbon-carbon bond hydrolase, which is the last inducible enzyme of the
orcinol catabolic pathway, is monomeric with a molecular size of ~38
kDa; it hydrolyzes acetopyruvate to equimolar quantities of acetate and
pyruvate. We have previously described the aqueous-solution structures
of acetopyruvate at pH 7.5 and several synthesized analogues by
1H-nuclear magnetic resonance (NMR)-Fourier transform (FT)
experiments. Three 1H signals (2.2 to 2.4 ppm) of the
methyl group are assigned unambiguously to the carboxylate anions of
2,4-diketo, 2-enol-4-keto, and 2-hydrate-4-keto forms (40:50:10). A
1H-NMR assay for acetopyruvate hydrolase was used to study
the kinetics and stoichiometries of reactions within a single reaction mixture (0.7 ml) by monitoring the three methyl-group signals of
acetopyruvate and of the products acetate and pyruvate. Examination of
4-tert-butyl-2,4-diketobutanoate hydrolysis by the same
method allowed the conclusion that it is the carboxylate 2-enol form(s) or carbanion(s) that is the actual substrate(s) of hydrolysis. Substrate analogues of 2,4-diketobutanoate with 4-phenyl or 4-benzyl groups are very poor substrates for the enzyme, whereas the
4-cyclohexyl analogue is readily hydrolyzed. In aqueous solution, the
arene analogues do not form a stable 2-enol structure but exist
principally as a delocalized
-electron system in conjugation with
the aromatic ring. The effects of several divalent metal ions on
solution structures were studied, and a tentative conclusion that the
enol forms are coordinated to Mg2+ bound to the enzyme was
made. 1H-2H exchange reactions showed the
complete, fast equilibration of 2H into the C-3 of
acetopyruvate chemically; this accounts for the appearance of
2H in the product pyruvate. The C-3 of the product pyruvate
was similarly labelled, but this exchange was only enzyme catalyzed; the methyl group of acetate did not undergo an exchange reaction. The
unexpected preference for bulky 4-alkyl-group analogues is discussed in
an evolutionary context for carbon-carbon bond hydrolases. Routine
one-dimensional 1H-NMR in normal
1H2O is a new method for rapid, noninvasive
assays of enzymic activities to obtain the kinetics and stoichiometries
of reactions in single reaction mixtures. Assessments of the solution
structures of both substrates and products are also shown.
*
Corresponding author. Mailing address: Institute of
Organic Chemistry, Technical University Graz, Stremayrgasse 16, A-8010 Graz, Austria. Phone: 43-316 873 8240. Fax: 43-316 873 8740. E-mail: sekretariat{at}orgc.tu-graz.ac-at.
This paper is dedicated to Robert McLafferty on the occasion of his
70th birthday.
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