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Journal of Bacteriology, March 1999, p. 1530-1536, Vol. 181, No. 5
Department of Biological Sciences, Stanford
University, Stanford, California 94305-5020
Received 3 June 1998/Accepted 17 December 1998
Expression of the degradative tryptophanase (tna)
operon of Escherichia coli is regulated by catabolite
repression and tryptophan-induced transcription antitermination. In
cultures growing in the absence of added tryptophan, transcription of
the structural genes of the tna operon is limited by
Rho-dependent transcription termination in the leader region of the
operon. Tryptophan induction prevents this Rho-dependent termination,
and requires in-frame translation of a 24-residue leader peptide coding
region, tnaC, that contains a single, crucial, Trp codon.
Studies with a lacZ reporter construct lacking the spacer
region between tnaC and the first major structural gene,
tnaA, suggested that tryptophan induction might involve cis action by the TnaC leader peptide on the ribosome
translating the tnaC coding region. The leader peptide was
hypothesized to inhibit ribosome release at the
tnaC stop codon, thereby blocking Rho's access to the
transcript. Regulatory studies with deletion constructs of the
tna operon of Proteus vulgaris supported this interpretation. In the present study the putative role of the tnaC stop codon in tna operon regulation in
E. coli was examined further by replacing the natural
tnaC stop codon, UGA, with UAG or UAA in a
tnaC-stop codon-tnaA'-'lacZ reporter construct.
Basal level expression was reduced to 20 and 50% when the UGA stop
codon was replaced by UAG or UAA, respectively, consistent with the finding that in E. coli translation terminates more
efficiently at UAG and UAA than at UGA. Tryptophan induction was
observed in strains with any of the stop codons. However, when UAG or
UAA replaced UGA, the induced level of expression was also reduced to
15 and 50% of that obtained with UGA as the tnaC stop
codon, respectively. Introduction of a mutant allele encoding a
temperature-sensitive release factor 1, prfA1, increased
basal level expression 60-fold when the tnaC stop codon was
UAG and 3-fold when this stop codon was UAA; basal level expression was
reduced by 50% in the construct with the natural stop codon, UGA. In
strains with any of the three stop codons and the prfA1
mutation, the induced levels of tna operon expression were
virtually identical. The effects of tnaC stop codon
identity on expression were also examined in the absence of Rho action,
using tnaC-stop codon-'lacZ constructs that
lack the tnaC-tnaA spacer region. Expression was low in
the absence of tnaC stop codon suppression. In most
cases, tryptophan addition resulted in about 50% inhibition
of expression when UGA was replaced by UAG or UAA and the appropriate
suppressor was present. Introduction of the prfA1 mutant
allele increased expression of the suppressed construct with the
UAG stop codon; tryptophan addition also resulted in ca. 50%
inhibition. These findings provide additional evidence implicating the
behavior of the ribosome translating tnaC in the regulation
of tna operon expression.
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Role of Ribosome Release in Regulation of
tna Operon Expression in Escherichia
coli
*
Corresponding author. Mailing address: Department of
Biological Sciences, Stanford University, Stanford, CA 94305-5020. Phone: (650) 725-1835. Fax: (650) 725-8221. E-mail:
yanofsky{at}cmgm.stanford.edu.
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