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Journal of Bacteriology, April 1999, p. 2148-2157, Vol. 181, No. 7
Graduate Program in Cellular and Molecular
Biology1 and Department of Microbiology
and Immunology,2 University of Michigan, Ann
Arbor, Michigan 48109-0620
Received 8 January 1998/Accepted 14 January 1999
The small, stable RNA molecule encoded by ssrA, known
as tmRNA or 10Sa RNA, is required for the growth of certain hybrid
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Analysis of the Role of
trans-Translation in the Requirement of tmRNA for
immP22 Growth in Escherichia
coli
immP22 phages in Escherichia
coli. tmRNA has been shown to tag partially synthesized proteins
for degradation in vivo by attaching a short peptide sequence, encoded
by tmRNA, to the carboxyl termini of these proteins. This tag sequence
contains, at its C terminus, an amino acid sequence that is recognized
by cellular proteases and leads to degradation of tagged proteins. A
model describing this function of tmRNA, the
trans-translation model (K. C. Keiler, P. R. Waller, and R. T. Sauer, Science 271:990-993, 1996), proposes that tmRNA acts first as a tRNA and then as a mRNA, resulting in
release of the original mRNA template from the ribosome and translocation of the nascent peptide to tmRNA. Previous work from this
laboratory suggested that tmRNA may also interact specifically with
DNA-binding proteins, modulating their activity. However, more recent
results indicate that interactions between tmRNA and DNA-binding
proteins are likely nonspecific. In light of this new information, we
examine the effects on
immP22 growth of
mutations eliminating activities postulated to be important for two
different steps in the trans-translation model, alanine charging of tmRNA and degradation of tagged proteins. This mutational analysis suggests that, while charging of tmRNA with alanine is essential for
immP22 growth in E. coli, degradation of proteins tagged by tmRNA is required only to
achieve optimal levels of phage growth. Based on these results, we
propose that trans-translation may have two roles, the
primary role being the release of stalled ribosomes from their mRNA
template and the secondary role being the tagging of truncated proteins
for degradation.
*
Corresponding author. Mailing address: Department of
Microbiology and Immunology, University of Michigan, Ann Arbor, MI
48109-0620. Phone: (734) 763-3142. Fax: (734) 764-3562. E-mail:
davidfri{at}umich.edu.
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