Previous Article | Next Article 
Journal of Bacteriology, July 2000, p. 3802-3808, Vol. 182, No. 13
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Fur Positive Regulation of Iron Superoxide Dismutase in
Escherichia coli: Functional Analysis of the
sodB Promoter
Sarah
Dubrac and
Danièle
Touati*
Institut Jacques Monod,
CNRS-Universités Paris 6 et Paris 7, 75251 Paris Cedex 05, France
Received 25 February 2000/Accepted 19 April 2000
In Escherichia coli, the expression of
sodB, which encodes iron superoxide dismutase, has been
suggested to be activated by Fur, the iron-responsive global regulator
initially characterized as a transcriptional repressor. We investigated
sodB regulation by functional analysis of the
sodB promoter using sodB-lac fusions with
various truncated and mutated promoters. Several cis- and trans-acting elements involved in sodB
regulation have been identified. The
-galactosidase activity of
sodB-lacZ reporter fusions and RNA analysis showed
sevenfold iron-dependent, Fur-mediated activation of expression. A
region just downstream from
10, including a large palindromic
sequence encompassing the +1 position followed by a 14-bp AT-rich
motif, is the site of Fur positive regulation, and the integrity of
both sequences was required for full Fur-mediated activation. The life
span of sodB mRNA was three times longer in a
fur+ strain, indicating that Fur-mediated
activation proceeds, at least in part, at the posttranscriptional
level. The H-NS and IHF histone-like factors also affected
sodB expression. IHF slightly repressed sodB
expression independently of Fur regulation. In contrast, H-NS negative
regulation operated only in the absence of Fur. Remarkably,
psodB behaved like a "pure extended -10" promoter. Deletion of the
35 region did not affect expression, whereas expression was totally abolished by a TG-to-CC mutation in the extended
10 sequence TGcTACCCT.
*
Corresponding author. Mailing address: Institut Jacques
Monod, CNRS-Universités Paris 6 et Paris 7, 2 place Jussieu,
75251 Paris Cedex 05, France. Phone: 33 1 44 27 47 19. Fax: 33 1 44 27 76 67. E-mail: touatida{at}ccr.jussieu.fr.
Journal of Bacteriology, July 2000, p. 3802-3808, Vol. 182, No. 13
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Carpenter, B. M., Whitmire, J. M., Merrell, D. S.
(2009). This Is Not Your Mother's Repressor: the Complex Role of Fur in Pathogenesis. Infect. Immun.
77: 2590-2601
[Full Text]
-
Agarwal, S., Sebastian, S., Szmigielski, B., Rice, P. A., Genco, C. A.
(2008). Expression of the Gonococcal Global Regulatory Protein Fur and Genes Encompassing the Fur and Iron Regulon during In Vitro and In Vivo Infection in Women. J. Bacteriol.
190: 3129-3139
[Abstract]
[Full Text]
-
Ellermeier, J. R., Slauch, J. M.
(2008). Fur Regulates Expression of the Salmonella Pathogenicity Island 1 Type III Secretion System through HilD. J. Bacteriol.
190: 476-486
[Abstract]
[Full Text]
-
Abed, N., Bickle, M., Mari, B., Schapira, M., Sanjuan-Espana, R., Robbe Sermesant, K., Moncorge, O., Mouradian-Garcia, S., Barbry, P., Rudkin, B. B., Fauvarque, M.-O., Michaud-Soret, I., Colas, P.
(2007). A Comparative Analysis of Perturbations Caused by a Gene Knock-out, a Dominant Negative Allele, and a Set of Peptide Aptamers. Mol. Cell. Proteomics
6: 2110-2121
[Abstract]
[Full Text]
-
Passalacqua, K. D., Bergman, N. H., Lee, J. Y., Sherman, D. H., Hanna, P. C.
(2007). The Global Transcriptional Responses of Bacillus anthracis Sterne (34F2) and a {Delta}sodA1 Mutant to Paraquat Reveal Metal Ion Homeostasis Imbalances during Endogenous Superoxide Stress. J. Bacteriol.
189: 3996-4013
[Abstract]
[Full Text]
-
Croxen, M. A., Ernst, P. B., Hoffman, P. S.
(2007). Antisense RNA Modulation of Alkyl Hydroperoxide Reductase Levels in Helicobacter pylori Correlates with Organic Peroxide Toxicity but Not Infectivity. J. Bacteriol.
189: 3359-3368
[Abstract]
[Full Text]
-
Lee, H.-J., Bang, S. H., Lee, K.-H., Park, S.-J.
(2007). Positive Regulation of fur Gene Expression via Direct Interaction of Fur in a Pathogenic Bacterium, Vibrio vulnificus. J. Bacteriol.
189: 2629-2636
[Abstract]
[Full Text]
-
Lelong, C., Rolland, M., Louwagie, M., Garin, J., Geiselmann, J.
(2007). Mutual Regulation of Crl and Fur in Escherichia coli W3110. Mol. Cell. Proteomics
6: 660-668
[Abstract]
[Full Text]
-
Maciag, A., Dainese, E., Rodriguez, G. M., Milano, A., Provvedi, R., Pasca, M. R., Smith, I., Palu, G., Riccardi, G., Manganelli, R.
(2007). Global Analysis of the Mycobacterium tuberculosis Zur (FurB) Regulon. J. Bacteriol.
189: 730-740
[Abstract]
[Full Text]
-
Cosgrove, K., Coutts, G., Jonsson, I.-M., Tarkowski, A., Kokai-Kun, J. F., Mond, J. J., Foster, S. J.
(2007). Catalase (KatA) and Alkyl Hydroperoxide Reductase (AhpC) Have Compensatory Roles in Peroxide Stress Resistance and Are Required for Survival, Persistence, and Nasal Colonization in Staphylococcus aureus. J. Bacteriol.
189: 1025-1035
[Abstract]
[Full Text]
-
Shaik, Y. B., Grogan, S., Davey, M., Sebastian, S., Goswami, S., Szmigielski, B., Genco, C. A.
(2007). Expression of the Iron-Activated nspA and secY Genes in Neisseria meningitidis Group B by Fur-Dependent and -Independent Mechanisms. J. Bacteriol.
189: 663-669
[Abstract]
[Full Text]
-
Lymberopoulos, M. H., Houle, S., Daigle, F., Leveille, S., Bree, A., Moulin-Schouleur, M., Johnson, J. R., Dozois, C. M.
(2006). Characterization of Stg Fimbriae from an Avian Pathogenic Escherichia coli O78:K80 Strain and Assessment of Their Contribution to Colonization of the Chicken Respiratory Tract.. J. Bacteriol.
188: 6449-6459
[Abstract]
[Full Text]
-
Alamuri, P., Mehta, N., Burk, A., Maier, R. J.
(2006). Regulation of the Helicobacter pylori Fe-S Cluster Synthesis Protein NifS by Iron, Oxidative Stress Conditions, and Fur.. J. Bacteriol.
188: 5325-5330
[Abstract]
[Full Text]
-
Leveille, S., Caza, M., Johnson, J. R., Clabots, C., Sabri, M., Dozois, C. M.
(2006). Iha from an Escherichia coli Urinary Tract Infection Outbreak Clonal Group A Strain Is Expressed In Vivo in the Mouse Urinary Tract and Functions as a Catecholate Siderophore Receptor.. Infect. Immun.
74: 3427-3436
[Abstract]
[Full Text]
-
Seib, K. L., Wu, H.-J., Kidd, S. P., Apicella, M. A., Jennings, M. P., McEwan, A. G.
(2006). Defenses against Oxidative Stress in Neisseria gonorrhoeae: a System Tailored for a Challenging Environment. Microbiol. Mol. Biol. Rev.
70: 344-361
[Abstract]
[Full Text]
-
Delany, I., Grifantini, R., Bartolini, E., Rappuoli, R., Scarlato, V.
(2006). Effect of Neisseria meningitidis Fur Mutations on Global Control of Gene Transcription.. J. Bacteriol.
188: 2483-2492
[Abstract]
[Full Text]
-
Mey, A. R., Wyckoff, E. E., Kanukurthy, V., Fisher, C. R., Payne, S. M.
(2005). Iron and Fur Regulation in Vibrio cholerae and the Role of Fur in Virulence. Infect. Immun.
73: 8167-8178
[Abstract]
[Full Text]
-
Mey, A. R., Craig, S. A., Payne, S. M.
(2005). Characterization of Vibrio cholerae RyhB: the RyhB Regulon and Role of ryhB in Biofilm Formation. Infect. Immun.
73: 5706-5719
[Abstract]
[Full Text]
-
Agarwal, S., King, C. A., Klein, E. K., Soper, D. E., Rice, P. A., Wetzler, L. M., Genco, C. A.
(2005). The Gonococcal Fur-Regulated tbpA and tbpB Genes Are Expressed during Natural Mucosal Gonococcal Infection. Infect. Immun.
73: 4281-4287
[Abstract]
[Full Text]
-
Davis, B. M., Quinones, M., Pratt, J., Ding, Y., Waldor, M. K.
(2005). Characterization of the Small Untranslated RNA RyhB and Its Regulon in Vibrio cholerae. J. Bacteriol.
187: 4005-4014
[Abstract]
[Full Text]
-
Jacobsen, I., Gerstenberger, J., Gruber, A. D., Bosse, J. T., Langford, P. R., Hennig-Pauka, I., Meens, J., Gerlach, G.-F.
(2005). Deletion of the Ferric Uptake Regulator Fur Impairs the In Vitro Growth and Virulence of Actinobacillus pleuropneumoniae. Infect. Immun.
73: 3740-3744
[Abstract]
[Full Text]
-
Kiryu, H., Oshima, T., Asai, K.
(2005). Extracting relations between promoter sequences and their strengths from microarray data. Bioinformatics
21: 1062-1068
[Abstract]
[Full Text]
-
Martin, P., Makepeace, K., Hill, S. A., Hood, D. W., Moxon, E. R.
(2005). Microsatellite instability regulates transcription factor binding and gene expression. Proc. Natl. Acad. Sci. USA
102: 3800-3804
[Abstract]
[Full Text]
-
Zhang, Z., Gosset, G., Barabote, R., Gonzalez, C. S., Cuevas, W. A., Saier, M. H. Jr.
(2005). Functional Interactions between the Carbon and Iron Utilization Regulators, Crp and Fur, in Escherichia coli. J. Bacteriol.
187: 980-990
[Abstract]
[Full Text]
-
Wilderman, P. J., Sowa, N. A., FitzGerald, D. J., FitzGerald, P. C., Gottesman, S., Ochsner, U. A., Vasil, M. L.
(2004). Identification of tandem duplicate regulatory small RNAs in Pseudomonas aeruginosa involved in iron homeostasis. Proc. Natl. Acad. Sci. USA
101: 9792-9797
[Abstract]
[Full Text]
-
Fuangthong, M., Helmann, J. D.
(2003). Recognition of DNA by Three Ferric Uptake Regulator (Fur) Homologs in Bacillus subtilis. J. Bacteriol.
185: 6348-6357
[Abstract]
[Full Text]
-
Karavolos, M. H., Horsburgh, M. J., Ingham, E., Foster, S. J.
(2003). Role and regulation of the superoxide dismutases of Staphylococcus aureus. Microbiology
149: 2749-2758
[Abstract]
[Full Text]
-
Masse, E., Escorcia, F. E., Gottesman, S.
(2003). Coupled degradation of a small regulatory RNA and its mRNA targets in Escherichia coli. Genes Dev.
17: 2374-2383
[Abstract]
[Full Text]
-
Sala, C., Forti, F., Di Florio, E., Canneva, F., Milano, A., Riccardi, G., Ghisotti, D.
(2003). Mycobacterium tuberculosis FurA Autoregulates Its Own Expression. J. Bacteriol.
185: 5357-5362
[Abstract]
[Full Text]
-
Grifantini, R., Sebastian, S., Frigimelica, E., Draghi, M., Bartolini, E., Muzzi, A., Rappuoli, R., Grandi, G., Genco, C. A.
(2003). Identification of iron-activated and -repressed Fur-dependent genes by transcriptome analysis of Neisseria meningitidis group B. Proc. Natl. Acad. Sci. USA
100: 9542-9547
[Abstract]
[Full Text]
-
Dacanay, A., Johnson, S. C., Bjornsdottir, R., Ebanks, R. O., Ross, N. W., Reith, M., Singh, R. K., Hiu, J., Brown, L. L.
(2003). Molecular Characterization and Quantitative Analysis of Superoxide Dismutases in Virulent and Avirulent Strains of Aeromonas salmonicida subsp. salmonicida. J. Bacteriol.
185: 4336-4344
[Abstract]
[Full Text]
-
Garrido, M. E., Bosch, M., Medina, R., Bigas, A., Llagostera, M., Perez de Rozas, A. M., Badiola, I., Barbe, J.
(2003). fur-independent regulation of the Pasteurella multocida hbpA gene encoding a haemin-binding protein. Microbiology
149: 2273-2281
[Abstract]
[Full Text]
-
D'Autreaux, B., Touati, D., Bersch, B., Latour, J.-M., Michaud-Soret, I.
(2002). Direct inhibition by nitric oxide of the transcriptional ferric uptake regulation protein via nitrosylation of the iron. Proc. Natl. Acad. Sci. USA
99: 16619-16624
[Abstract]
[Full Text]
-
Oram, D. M., Avdalovic, A., Holmes, R. K.
(2002). Construction and Characterization of Transposon Insertion Mutations in Corynebacterium diphtheriae That Affect Expression of the Diphtheria Toxin Repressor (DtxR). J. Bacteriol.
184: 5723-5732
[Abstract]
[Full Text]
-
Master, S. S., Springer, B., Sander, P., Boettger, E. C., Deretic, V., Timmins, G. S.
(2002). Oxidative stress response genes in Mycobacterium tuberculosis: role of ahpC in resistance to peroxynitrite and stage-specific survival in macrophages. Microbiology
148: 3139-3144
[Abstract]
[Full Text]
-
Ricci, S., Janulczyk, R., Bjorck, L.
(2002). The Regulator PerR Is Involved in Oxidative Stress Response and Iron Homeostasis and Is Necessary for Full Virulence of Streptococcus pyogenes. Infect. Immun.
70: 4968-4976
[Abstract]
[Full Text]
-
Stancik, L. M., Stancik, D. M., Schmidt, B., Barnhart, D. M., Yoncheva, Y. N., Slonczewski, J. L.
(2002). pH-Dependent Expression of Periplasmic Proteins and Amino Acid Catabolism in Escherichia coli. J. Bacteriol.
184: 4246-4258
[Abstract]
[Full Text]
-
Sebastian, S., Agarwal, S., Murphy, J. R., Genco, C. A.
(2002). The Gonococcal Fur Regulon: Identification of Additional Genes Involved in Major Catabolic, Recombination, and Secretory Pathways. J. Bacteriol.
184: 3965-3974
[Abstract]
[Full Text]
-
Masse, E., Gottesman, S.
(2002). A small RNA regulates the expression of genes involved in iron metabolism in Escherichiacoli. Proc. Natl. Acad. Sci. USA
99: 4620-4625
[Abstract]
[Full Text]
-
Ohashi, N., Zhi, N., Lin, Q., Rikihisa, Y.
(2002). Characterization and Transcriptional Analysis of Gene Clusters for a Type IV Secretion Machinery in Human Granulocytic and Monocytic Ehrlichiosis Agents. Infect. Immun.
70: 2128-2138
[Abstract]
[Full Text]
-
Campoy, S., Jara, M., Busquets, N., de Rozas, A. M. P., Badiola, I., Barbe, J.
(2002). Intracellular cyclic AMP concentration is decreased in Salmonella typhimurium fur mutants. Microbiology
148: 1039-1048
[Abstract]
[Full Text]
-
Bebien, M., Lagniel, G., Garin, J., Touati, D., Vermeglio, A., Labarre, J.
(2002). Involvement of Superoxide Dismutases in the Response of Escherichia coli to Selenium Oxides. J. Bacteriol.
184: 1556-1564
[Abstract]
[Full Text]
-
Dubrac, S., Touati, D.
(2002). Fur-mediated transcriptional and post-transcriptional regulation of FeSOD expression in Escherichia coli. Microbiology
148: 147-156
[Abstract]
[Full Text]
-
Webb, E. A., Moffett, J. W., Waterbury, J. B.
(2001). Iron Stress in Open-Ocean Cyanobacteria (Synechococcus, Trichodesmium, and Crocosphaera spp.): Identification of the IdiA Protein. Appl. Environ. Microbiol.
67: 5444-5452
[Abstract]
[Full Text]
-
Kirby, A. E., Metzger, D. J., Murphy, E. R., Connell, T. D.
(2001). Heme Utilization in Bordetella avium Is Regulated by RhuI, a Heme-Responsive Extracytoplasmic Function Sigma Factor. Infect. Immun.
69: 6951-6961
[Abstract]
[Full Text]
-
Leclere, V., Chotteau-Lelievre, A., Gancel, F., Imbert, M., Blondeau, R.
(2001). Occurrence of two superoxide dismutases in Aeromonas hydrophila: molecular cloning and differential expression of the sodA and sodB genes. Microbiology
147: 3105-3111
[Abstract]
[Full Text]
-
Delany, I., Pacheco, A. B. F., Spohn, G., Rappuoli, R., Scarlato, V.
(2001). Iron-Dependent Transcription of the frpB Gene of Helicobacter pylori Is Controlled by the Fur Repressor Protein. J. Bacteriol.
183: 4932-4937
[Abstract]
[Full Text]
-
Pomposiello, P. J., Bennik, M. H. J., Demple, B.
(2001). Genome-Wide Transcriptional Profiling of the Escherichia coli Responses to Superoxide Stress and Sodium Salicylate. J. Bacteriol.
183: 3890-3902
[Abstract]
[Full Text]
-
Pradel, E., Locht, C.
(2001). Expression of the Putative Siderophore Receptor Gene bfrZ Is Controlled by the Extracytoplasmic-Function Sigma Factor BupI in Bordetella bronchiseptica. J. Bacteriol.
183: 2910-2917
[Abstract]
[Full Text]
-
Horsburgh, M. J., Ingham, E., Foster, S. J.
(2001). In Staphylococcus aureus, Fur Is an Interactive Regulator with PerR, Contributes to Virulence, and Is Necessary for Oxidative Stress Resistance through Positive Regulation of Catalase and Iron Homeostasis. J. Bacteriol.
183: 468-475
[Abstract]
[Full Text]
-
Bereswill, S., Greiner, S., van Vliet, A. H. M., Waidner, B., Fassbinder, F., Schiltz, E., Kusters, J. G., Kist, M.
(2000). Regulation of Ferritin-Mediated Cytoplasmic Iron Storage by the Ferric Uptake Regulator Homolog (Fur) of Helicobacter pylori. J. Bacteriol.
182: 5948-5953
[Abstract]
[Full Text]
-
Arfin, S. M., Long, A. D., Ito, E. T., Tolleri, L., Riehle, M. M., Paegle, E. S., Hatfield, G. W.
(2000). Global Gene Expression Profiling in Escherichia coli K12. THE EFFECTS OF INTEGRATION HOST FACTOR. J. Biol. Chem.
275: 29672-29684
[Abstract]
[Full Text]
-
Masse, E., Gottesman, S.
(2002). A small RNA regulates the expression of genes involved in iron metabolism in Escherichiacoli. Proc. Natl. Acad. Sci. USA
99: 4620-4625
[Abstract]
[Full Text]