Journal of Bacteriology, November 2000, p. 6106-6113, Vol. 182, No. 21
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
- and
-Subunit Conserved Residues Required for Activity In Vivo and
In Vitro



Section of Molecular Genetics and Microbiology, Institute for Cell and Molecular Biology, University of Texas at Austin, Austin, Texas 78712
Received 17 March 2000/Accepted 28 July 2000
The Escherichia coli DNA polymerase III
and
subunits are single-strand DNA-dependent ATPases (the latter requires
the
and
' subunits for significant ATPase activity) involved in loading processivity clamp
. They are homologous to clamp-loading proteins of many organisms from phages to humans. Alignment of 27 prokaryotic
/
homologs and 1 eukaryotic
/
homolog has
refined the sequences of nine previously defined identity and
functional motifs. Mutational analysis has defined highly conserved
residues required for activity in vivo and in vitro. Specifically,
mutations introduced into highly conserved residues within three of
those motifs, the P loop, the DExx region, and the SRC region,
inactivated complementing activity in vivo and clamp loading in vitro
and reduced ATPase catalytic efficiency in vitro. Mutation of a highly conserved residue within a fourth motif, VIc, inactivated clamp-loading activity and reduced ATPase activity in vitro, but the mutant gene, on
a multicopy plasmid, retained complementing activity in vivo and the
mutant gene also supported apparently normal replication and growth as
a haploid, chromosomal allele.
Present address: University of Connecticut School of Dental
Medicine, Farmington, CT 06030.
Present address: University of Texas Medical Branch, Galveston, TX 77555.
§
Present address: Genome Therapeutics Corp., Waltham, MA 02453.
Present address: 1807 Frazier Ave., Austin, TX 78704.
#
Present address: Union Square Family Dentistry, Union
City, CA 94587.
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