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Journal of Bacteriology, October 2001, p. 5571-5579, Vol. 183, No. 19
Centro Nacional de Biotecnología del
Consejo Superior de Investigaciones Científicas, Campus de
Cantoblanco, 28049 Madrid, Spain
Received 25 April 2001/Accepted 11 July 2001
We have isolated a recombinant phage antibody (Phab) that binds a
distinct epitope of the subclass of the
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.19.5571-5579.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Monitoring Intracellular Levels of XylR in Pseudomonas
putida with a Single-Chain Antibody Specific for
Aromatic-Responsive Enhancer-Binding Proteins
54-dependent
prokaryotic enhancer-binding proteins that respond directly to aromatic
effectors, e.g., those that activate biodegradative operons of
Pseudomonas spp. The DNA segments encoding the
variable (V) domains of the immunoglobulins expressed by mice immunized with the C-terminal half of TouR (TouR
A) of
Pseudomonas stutzeri OX1 were amplified and rearranged
in vitro as single-chain Fv (scFv) genes. An scFv library was thereby
constructed, expressed in an M13 display system, and subjected to a
panning procedure with TouR. One clone (named B7) was selected with
high affinity for TouR and XylR (the regulator of the upper TOL operon
of the pWW0 plasmid). The epitope recognized by this Phab was mapped to
the peptide TPRAQATLLRVL, which seems to be
characteristic of the group of enhancer-binding proteins to
which TouR and XylR belong and which is located adjacent to the Walker
B motif of the proteins. The Phab B7 was instrumental in measuring
directly the intracellular levels of XylR expressed from its natural
promoter in monocopy gene dosage in Pseudomonas putida
under various conditions. Growth stage, the physical form of the
protein produced (XylR or XylR
A), and the presence or absence
of aromatic inducers in the medium influenced the intracellular pool of
these molecules. XylR oscillated from a minimum of ~30 molecules
(monomers) per cell during exponential phase to ~140 molecules per
cell at stationary phase. Activation of XylR by aromatic inducers
decreased the intracellular concentration of the regulator. The levels
of the constitutively active variant of XylR named XylR
A were
higher, fluctuating between ~90 and ~570 molecules per cell,
depending on the growth stage. These results are compatible with the
present model of transcriptional autoregulation of XylR and
suggest the existence of mechanisms controlling the stability of XylR
protein in vivo.
*
Corresponding author. Mailing address: Centro Nacional
de Biotecnología
CSIC, Campus de Cantoblanco, Madrid 28049, Spain. Phone: 34 91 585 45 36. Fax: 34 91 585 45 06. E-mail:
vdlorenzo{at}cnb.uam.es.
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