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Journal of Bacteriology, January 2001, p. 637-643, Vol. 183, No. 2
Ruhr-Universität Bochum, Fakultät
für Biologie, Lehrstuhl für Biologie der Mikroorganismen,
D-44780 Bochum, Germany,1 and Department
of Biology, Washington University, St. Louis, Missouri
631302
Received 26 July 2000/Accepted 26 October 2000
The phototrophic nonsulfur purple bacterium
Rhodobacter capsulatus can use urea as a sole
source of nitrogen. Three transposon Tn5-induced mutations
(Xan-9, Xan-10, and Xan-19), which led to a Ure
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.2.637-643.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Urea Utilization in the Phototrophic Bacterium
Rhodobacter capsulatus Is Regulated by the
Transcriptional Activator NtrC
phenotype, were mapped to the ureF and ureC
genes, whereas two other Tn5 insertions (Xan-20 and Xan-22)
were located within the ntrC and ntrB genes,
respectively. As in Klebsiella aerogenes and other
bacteria, the genes encoding urease (ureABC) and the genes
required for assembly of the nickel metallocenter (ureD and
ureEFG) are clustered in R. capsulatus
(ureDABC-orf136-ureEFG). No
homologues of Orf136 were found in the databases, and mutational analysis demonstrated that orf136 is not essential for
urease activity or growth on urea. Analysis of a
ureDA-lacZ fusion showed that maximum
expression of the ure genes occurred under
nitrogen-limiting conditions (e.g., serine or urea as the sole nitrogen
source), but ure gene expression was not substrate (urea)
inducible. Expression of the ure genes was strictly
dependent on NtrC, whereas
54 was not essential for
urease activity. Expression of the ure genes was lower (by
a factor of 3.5) in the presence of ammonium than under
nitrogen-limiting conditions, but significant transcription was also
observed in the presence of ammonium, approximately 10-fold higher than
in an ntrC mutant background. Thus, ure gene
expression in the presence of ammonium also requires NtrC. Footprint
analyses demonstrated binding of NtrC to tandem binding sites upstream of the ureD promoter. Phosphorylation of NtrC increased DNA
binding by at least eightfold. Although urea is effectively used as a nitrogen source in an NtrC-dependent manner, nitrogenase activity was
not repressed by urea.
*
Corresponding author. Mailing address:
Ruhr-Universität Bochum, Fakultät für Biologie,
Lehrstuhl für Biologie der Mikroorganismen, D-44780
Bochum, Germany. Phone: 49 (234) 32-23100. Fax: 49 (234) 32-14620. E-mail: werner.klipp{at}ruhr-uni-bochum.de.
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