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Journal of Bacteriology, November 2001, p. 6184-6196, Vol. 183, No. 21
Unité de Génétique des
Bactéries Intracellulaires, Institut Pasteur, F-75724 Paris Cedex
15, France
Received 19 December 2000/Accepted 16 August 2001
The growth recovery of Escherichia coli K-12 and
Salmonella enterica serovar Typhimurium
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.21.6184-6196.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Comparison of
relA Strains of Escherichia
coli and Salmonella enterica Serovar Typhimurium
Suggests a Role for ppGpp in Attenuation Regulation of Branched-Chain
Amino Acid Biosynthesis
relA
mutants were compared after nutritional downshifts requiring
derepression of the branched-chain amino acid pathways. Because
wild-type E. coli K-12 and S. enterica serovar
Typhimurium LT2 strains are defective in the expression of the genes
encoding the branch point acetohydroxy acid synthetase II
(ilvGM) and III (ilvIH) isozymes,
respectively,
relA derivatives corrected for these
mutations were also examined. Results indicate that reduced expression
of the known global regulatory factors involved in branched-chain amino
acid biosynthesis cannot completely explain the observed growth
recovery defects of the
relA strains. In the E. coli K-12 MG1655
relA background, correction of
the preexisting rph-1 allele which causes pyrimidine
limitations resulted in complete loss of growth recovery. S. enterica serovar Typhimurium LT2
relA strains were
fully complemented by elevated basal ppGpp levels in an S. enterica serovar Typhimurium LT2
relA spoT1 mutant or in a strain harboring an RNA polymerase mutation conferring a
reduced RNA chain elongation rate. The results are best explained by a
dependence on the basal levels of ppGpp, which are determined by
relA-dependent changes in tRNA synthesis
resulting from amino acid starvations. Expression of the branched-chain
amino acid operons is suggested to require changes in the RNA chain
elongation rate of the RNA polymerase, which can be achieved either by
elevation of the basal ppGpp levels or, in the case of the E. coli K-12 MG1655 strain, through pyrimidine limitations which
partially compensate for reduced ppGpp levels. Roles for ppGpp in
branched-chain amino acid biosynthesis are discussed in terms of
effects on the synthesis of known global regulatory proteins and
current models for the control of global RNA synthesis by ppGpp.
*
Corresponding author. Mailing address: Institut
Pasteur, Unité de Génétique des Bactéries
Intracellulaires, 28 Rue du Docteur Roux, F-75724 Paris Cedex, France.
Phone: (033)-01-4061-3164. Fax: (033)-01-4568-8228. E-mail:
ktedin{at}pasteur.fr.
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