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Journal of Bacteriology, June 2005, p. 3921-3930, Vol. 187, No. 12
0021-9193/05/$08.00+0     doi:10.1128/JB.187.12.3921-3930.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.

Tricksy Business: Transcriptome Analysis Reveals the Involvement of Thioredoxin A in Redox Homeostasis, Oxidative Stress, Sulfur Metabolism, and Cellular Differentiation in Bacillus subtilis{dagger}

Wiep Klaas Smits,1 Jean-Yves F. Dubois,2,{ddagger} Sierd Bron,1 Jan Maarten van Dijl,2,{ddagger} and Oscar P. Kuipers1*

Department of Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands,1 Department of Pharmaceutical Biology, University of Groningen, A. Deusinglaan 1, 9713 AV, Groningen, The Netherlands2

Received 12 January 2005/ Accepted 10 March 2005

Thioredoxins are important thiol-reactive proteins. Most knowledge about this class of proteins is derived from proteome studies, and little is known about the global transcriptional response of cells to various thioredoxin levels. In Bacillus subtilis, thioredoxin A is encoded by trxA and is essential for viability. In this study, we report the effects of minimal induction of a strain carrying an IPTG (isopropyl-ß-D-thiogalactopyranoside)-inducible trxA gene (ItrxA) on transcription levels, as determined by DNA macroarrays. The effective depletion of thioredoxin A leads to the induction of genes involved in the oxidative stress response (but not those dependent on PerR), phage-related functions, and sulfur utilization. Also, several stationary-phase processes, such as sporulation and competence, are affected. The majority of these phenotypes are rescued by a higher induction level of ItrxA, leading to an approximately wild-type level of thioredoxin A protein. A comparison with other studies shows that the effects of thioredoxin depletion are distinct from, but show some similarity to, oxidative stress and disulfide stress. Some of the transcriptional effects may be linked to thioredoxin-interacting proteins. Finally, thioredoxin-linked processes appear to be conserved between prokaryotes and eukaryotes.


* Corresponding author. Mailing address: Department of Genetics, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands. Phone: 31-50-3632093. Fax: 31-50-3632348. E-mail: o.p.kuipers{at}rug.nl.

{dagger} Supplemental material for this article may be found at http://jb.asm.org/.

{ddagger} Present address: Laboratory of Molecular Bacteriology, Department of Medical Microbiology, University Medical Center Groningen and University of Groningen, Hanzeplein 1, P.O. Box 30001, 9700 RB Groningen, The Netherlands.


Journal of Bacteriology, June 2005, p. 3921-3930, Vol. 187, No. 12
0021-9193/05/$08.00+0     doi:10.1128/JB.187.12.3921-3930.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.




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