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J Bacteriol, June 1998, p. 2895-2900, Vol. 180, No. 11
0021-9193/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Nonnative Proteins Induce Expression of the Bacillus
subtilis CIRCE Regulon
Axel
Mogk,1
Andrea
Völker,2
Susanne
Engelmann,3
Michael
Hecker,3
Wolfgang
Schumann,1 and
Uwe
Völker2,*
Institut für Genetik, Universität
Bayreuth, 95440 Bayreuth,1
Laboratorium
für Mikrobiologie, Philipps-Universität, and MPI
für terrestrische Mikrobiologie, 35043 Marburg,2 and
Institut für
Mikrobiologie and Molekularbiologie and
Ernst-Moritz-Arndt-Universität, 17487 Greifswald,3 Germany
Received 23 December 1997/Accepted 24 March 1998
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ABSTRACT |
The chaperone-encoding groESL and dnaK
operons constitute the CIRCE regulon of Bacillus subtilis.
Both operons are under negative control of the repressor protein HrcA,
which interacts with the CIRCE operator and whose activity is modulated
by the GroESL chaperone machine. In this report, we demonstrate that
induction of the CIRCE regulon can also be accomplished by ethanol
stress and puromycin. Introduction of the hrcA gene and a
transcriptional fusion under the control of the CIRCE operator into
Escherichia coli allowed induction of this fusion by heat
shock, ethanol stress, and overproduction of GroESL substrates. The
expression level of this hrcA-bgaB fusion inversely
correlated with the amount of GroE machinery present in the cells.
Therefore, all inducing conditions seem to lead to induction via
titration of the GroE chaperonins by the increased level of nonnative
proteins formed. Puromycin treatment failed to induce the
B-dependent general stress regulon, indicating that
nonnative proteins in general do not trigger this response.
Reconstitution of HrcA-dependent heat shock regulation of B. subtilis in E. coli and complementation of E. coli groESL mutants by B. subtilis groESL indicate
that the GroE chaperonin systems of the two bacterial species are
functionally exchangeable.
 |
INTRODUCTION |
Molecular chaperones such as those
represented by the DnaK and GroE machines are induced by heat shock in
all organisms from bacteria to humans. Regulation of this heat shock
response has been extensively analyzed in Escherichia coli,
where induction of one class of heat shock proteins including the
molecular chaperones is triggered by the accumulation of nonnative
proteins in the cytoplasm and governed by the alternative sigma factor
32 (4, 22, 33-35). Increasing the level of
active
32 due to stabilization of the protein and
enhanced translation of its mRNA following thermal upshock is
responsible for the induction of this heat shock regulon (8, 35,
37). The activity of
32 is modulated by the DnaK
chaperone system which sequesters most of the
32
molecules under physiological conditions and most probably presents them to a protease such as FtsH (7, 16, 38). Upon
accumulation of nonnative proteins within the cytoplasm, the DnaK
system is titrated by these substrates, and thereby the amount of
active
32 increases transiently. Since chaperones
perform important functions in preventing aggregation of nonnative
proteins, they are induced by not only heat shock but also by other
stimuli such as ethanol, puromycin, viral infection, nalidixic acid,
heavy metals such as cadmium chloride, glucose starvation, and osmotic
or oxidative stress (13, 19, 22). Induction of these
conserved heat shock proteins by a variety of different stimuli is
common in bacteria and higher organisms (23).
In Bacillus subtilis, at least four classes of heat shock
genes can be distinguished. Class I, which comprises the
groESL and dnaK operons, also designated the
CIRCE regulon, is transcribed from vegetative promoters and subject to
negative control by the HrcA repressor, which acts at the
transcriptional level by interacting with an operator, the CIRCE
element, located immediately downstream of the start point of
transcription (30, 42, 43). Since purified HrcA repressor
aggregates in vitro, it was postulated that GroE proteins are required
to maintain HrcA in an active state (21). Members of class
II absolutely require the alternative sigma factor
B for
their induction by heat and other stresses (10). Class III
currently comprises clpC, clpP, and
clpE, and heat and stress induction is mediated by the
repressor CtsR (class III stress gene repressor [5]).
Heat shock genes, such as trxA, lon,
ftsH, htpG, and ahpCF, not
belonging to classes I through III are currently grouped in class IV,
but the mechanisms which are responsible for heat induction of these
genes have not been characterized (2, 10, 26, 31). In
contrast to the other classes and the induction profile in other
bacteria, class I heat shock genes seem to be subject to a
heat-specific induction in B. subtilis (10, 11,
39).
We now show that this class of genes is induced not only by heat shock
but also by a group of related stimuli including ethanol stress,
treatment with puromycin, and production of inclusion bodies which
probably all share the increased formation of nonnative proteins.
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MATERIALS AND METHODS |
Bacterial strains, plasmids, and growth conditions.
The
bacterial strains and plasmids used during this study are listed in
Table 1. The B. subtilis and
E. coli strains were cultivated under vigorous agitation in
LB (25) at 37 and 30°C, respectively. Stresses were
imposed during exponential growth according to the following scheme:
heat shock (transfer of the culture to 50°C [B.
subtilis] or 42°C [E. coli]); salt stress (addition of NaCl to a final concentration of 4% [wt/vol]); ethanol (addition of ethanol to a final concentration of 4 or 5% [vol/vol]); and puromycin (addition of the inhibitor to a final concentration of 20 µg/ml). Cultures were exposed to the different stimuli for the times
indicated in the corresponding figures and figure legends.
RNA isolation and analysis of transcription.
Total RNA was
prepared by a modification (39) of the acid-phenol method of
Majumdar et al. (17). For slot blot analysis, serial
dilutions of the RNA were transferred onto a positively charged nylon
membrane by slot blotting and hybridized with digoxygenin-labeled RNA
probes synthesized in vitro from linearized plasmids as instructed by
the manufacturer (Boehringer Mannheim). The fluorescence of the Vistra
ECF substrate was quantified with the Storm860 system from Molecular
Dynamics, using RNA dilutions with a signal strength in the linear
range of the instrument. Induction ratios were calculated by setting
the value of the corresponding control (nontreated or exponentially
growing culture) to 1. For the preparation of the digoxigenin-labeled
RNA probes, a DNA fragment encompassing the four downstream genes of
the sigB operon was amplified from chromosomal DNA of the
wild-type strain 168 by using the synthetic oligonucleotides sigBF
(5'-CGCAGGAAATGGTCAAAAAC) and sigBR
(5'-AATAAATCAGCCAATCTCCCTC). The PCR fragment was cloned
into pBluescript II KS
digested with EcoRV.
The resulting plasmid, pKSMsigB was digested with
ClaI and religated, yielding plasmid pKSMsigBC.
After digestion of pKSMsigBC with HindIII and
BamHI, filling in the ends with Klenow polymerase, and
religation of the larger fragment, pKSMB52 was obtained. Synthesis of
RNA in vitro with T3 RNA polymerase after linearization of pKSMB52 with
SacI can be used for the production of a digoxigenin-labeled
RNA probe specific for sigB. A suitable fragment for the
preparation of a groEL-specific probe was generated by
cloning an 800-bp HindIII-EcoRI fragment from
pASG145 (27) encoding groEL of B. subtilis into pSPT18. The resulting plasmid, pSEG247, can be used
for the preparation of digoxigenin-labeled, groEL-specific
RNA probe with T7 RNA polymerase after linearization with
HindIII.
Construction of plasmids.
To allow regulated expression of
GroEL substrates, plasmids pREP9-tst, pREP9-lucI,
and pREP9-cbbM were constructed. For the construction of
pREP9-tst, a DNA fragment encoding the rat tst gene was isolated by BamHI-HindIII digestion
of pQE40-tst and cloned into pREP9 digested with
BamHI and HindIII. To obtain
pREP9-lucI, the lucI gene was amplified from
pDS12-Placwt-9A-lucI by using the synthetic
oligonucleotides LUCI-1 (5'-GGCCATGGATCCATGGAAGACGCCAAAAACATAAAGA) and LUCI-2 (5'-GGCCATAAGCTTTTACAATTTGGGCTTTCCGCCCTT).
The PCR fragment was cloned into pREP9 digested with
BamHI and HindIII. To construct
pREP9-cbbM, the cbbM gene was amplified from
chromosomal DNA of Rhodobacter capsulatus by using the
synthetic oligonucleotides RubisCo-3
(5'-GGCCATGTCGACATGGATCAGTCTAACCGTTACGCCC) and RubisCo-2 (5'-GGCCATAAGCTTTCAGTTCACGCCCAGAGCAACGCG). The PCR product
was cloned into pREP9 digested with SalI and
HindIII. To allow overproduction of the GroE chaperone
machine from E. coli or B. subtilis,
pBAD33-groESL and pREP9-groESL were constructed.
For the construction of pBAD33-groESL, the groES
and groEL genes of E. coli were amplified from
chromosomal DNA by using the synthetic oligonucleotides ECES
(5'-GGCCATGAGCTCAAAGGAGAGTTATCAATGAATATTCGT) and ECEL
(5'-GGCCATAAGCTTTTACATCATGCCGCCCATGCCACC). The PCR fragment was cloned into pBAD33 digested with SacI and
HindIII. To obtain pREP9-groESL, the
groES and groEL genes of B. subtilis
were amplified from chromosomal DNA by using the synthetic
oligonucleotides PP1 (5'-GGCCATGGATCCATGTTAAAGCCATTAGGTGATCGC)
and EL-B2 5'-GGCCATGGATCCTTACATCATTCCACCCATACCGCC). The PCR fragment was cloned into pREP9 digested with
BamHI. To replace the kanamycin resistance gene of pAM101
with a tetracycline resistance gene, tet was isolated from
pBgaB-tet by XbaI-NotI digestion and
cloned into pAM101 digested with XbaI and NotI, yielding plasmid pAM103.
Fractionation of E. coli proteins.
Bacterial
cultures (10-ml aliquots) were rapidly cooled to 0°C in an ice water
bath and harvested by centrifugation (10 min, 4°C, 5,000 × g). Pellets were resuspended in 10× lysis buffer (100 mM
Tris-Cl [pH 7.5], 100 mM KCl, 2 mM EDTA, 15% [wt/vol] sucrose, 1 mg of lysozyme per ml) according to optical density (50 µl of lysis
buffer for a 10-ml culture with an optical density at 600 nm of 1) and
frozen at
20°C. After thawing at 0°C, addition of 10 volumes of
ice-cold water, and mixing, the viscous, turbid solution was sonicated
with a Branson Cell Disruptor B15 (microtip, level 6, 50% duty cycle,
eight strokes) while cooling. Insoluble material was pelleted by
centrifugation at 25,000 × g for 30 min at 4°C.
Supernatants were removed and subjected to precipitation with
trichloracetic acid (TCA; 10%, final concentration), and pellets were
resuspended in sample buffer. Equal aliquots of soluble and insoluble
fractions were analyzed by sodium dodecyl sulfate-polyacrylamide gel
electrophoresis (SDS-PAGE) followed by immunoblotting or staining with
Coomassie brilliant blue.
Two-dimensional protein gel electrophoresis.
Protein
extracts were prepared by passage through a French press after cells
had been harvested on ice. Equal amounts of protein (400 µg) were
loaded. Proteins were separated with IPG strips (pH 4 to 8) in the
first dimension on the Multiphor apparatus supplied by Pharmacia,
equilibrated, loaded onto 12.5% polyacrylamide gels, and separated
according to molecular mass with the Investigator electrophoresis
system of ESA Inc. Proteins were visualized by staining with Phastgel
Blue R (Pharmacia Biotech).
General methods.
SDS-PAGE and Western blot analysis were
performed as described previously (40). B. subtilis transformation was carried out as described by Yasbin et
al. (41), and transformants were selected on agar containing
kanamycin (20 µg/ml) or chloramphenicol (20 µg/ml). All DNA
manipulations and E. coli transformations were carried out
according to standard protocols (25).
-Galactosidase activities were determined as described elsewhere (20).
 |
RESULTS AND DISCUSSION |
Ethanol and puromycin trigger induction of the CIRCE regulon in
B. subtilis.
In an effort to identify additional
stress proteins of B. subtilis, exponentially growing
wild-type bacteria were challenged with different stress factors, and
their protein patterns were analyzed by two-dimensional protein gel
electrophoresis (1). These analyses revealed that the amount
of GroES increased not only after heat shock but also after exposure to
ethanol stress (Fig. 1A) but not after
salt stress or glucose limitation (data not shown). A similar induction
pattern was also observed for GroEL and DnaK (data not shown). To
quantitate these observations, the kinetics of expression of DnaK and
GroEL after heat shock, ethanol, and salt stress were measured by
Western blot analysis. Crude extracts were prepared from exponentially
growing B. subtilis PY22, harvested immediately before (time
zero) and at different times after stress treatment; the proteins were
separated by SDS-PAGE, transferred to nitrocellulose membranes, and
finally probed with antibodies prepared against GroEL, DnaK, and RsbW.
Whereas heat shock triggered a rapid increase in the level of GroEL and
DnaK as previously reported, ethanol treatment resulted in a slow but continuous accumulation of both proteins (Fig. 1B); salt shock did not
influence the level of the chaperones. In contrast, all three stimuli
resulted in a rapid increase of the level of RsbW, a class II
B-dependent heat shock protein.

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FIG. 1.
Influence of heat shock, ethanol, and salt stress on
levels of GroEL, DnaK, and RsbW. B. subtilis PY22 was grown
in LB, and stresses were imposed during exponential growth by
transferring the culture from 37 to 48°C or by adding ethanol (EtOH)
or NaCl to a final concentration of 4% (vol/vol or wt/vol,
respectively). (A) Sections of Coomassie blue R-350-stained
two-dimensional protein gels prepared from crude extracts of growing
cells (co) or cells harvested 90 min after imposition of stress.
Besides GroES, the B-dependent stress protein YkzA and a
vegetative protein are labeled. (B) Equal amounts of crude protein
extracts (50 µg per lane) prepared from bacteria harvested at the
time points (minutes) indicated were separated by SDS-PAGE. After
transfer to a nitrocellulose membrane, levels of GroEL, DnaK, and RsbW
were determined with specific antibodies raised against the
corresponding proteins as described previously (3, 29,
32).
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To determine whether accumulation of the chaperones was due to an
increase in their amount of transcript, the level of groESL mRNA was determined by slot blot analysis. Heat shock triggered a rapid
increase in the level of groESL mRNA as expected, but ethanol caused a slower but continuous increase in the amount of
groESL mRNA (Fig. 2). To
confirm these results by a different approach, B. subtilis
1012 carrying an hrcA-bgaB transcriptional fusion
(20) was subjected to stress treatment. When a strain carrying this fusion was shifted from 37 to 50°C,
-galactosidase activity increased eightfold within 15 min, whereas treatment with 5%
(vol/vol) ethanol caused a slow gradual increase, resulting in a
fivefold induction after 60 min (Table
2). Addition of 4% (wt/vol) NaCl did not
result in any increase in the expression of the hrcA-bgaB
transcriptional fusion. Significant increases in the groESL
mRNA level were also observed after treatment with puromycin (20 µg/ml, final concentration) (Fig. 2). For sigB, which is
itself a member of class II heat shock genes, the slot blot analysis
revealed strong induction as quickly as 3 min after heat shock,
ethanol, or salt stress (Fig. 2) but no induction after addition of
puromycin (Fig. 2). Although class I and class II heat shock genes
share some inducers such as heat shock and ethanol, the intracellular
signals which trigger induction seem to differ since both classes
display different induction kinetics and different induction profiles.
For example, ethanol treatment results in a fast induction of class II
but slow accumulation of class I heat shock proteins, and class II is
not induced by puromycin, whereas class I does not respond to salt
stress or starvation for glucose.

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FIG. 2.
Levels of groEL and sigB mRNA in
B. subtilis after challenge with heat, ethanol, or salt
stress and puromycin. Serial dilutions of total RNA prepared from
B. subtilis PY22 before (co) and at 5, 10, 15, 20, 40, and
60 min after exposure to stress were bound to a positively charged
nylon membrane and hybridized with the digoxigenin-labeled antisense
RNA probes specific for groEL and sigB (18,
39). The hybridization signals were quantified with a
fluorimager. The mRNA level in the control prior to stress was set to
1, and the induction ratios are shown. Stresses were triggered as
described in Materials and Methods. , 50°C; , 4% ethanol; ,
4% NaCl; , 20 µg of puromycin per ml.
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Induction of an hrcA-bgaB transcriptional fusion in
E. coli by heat, ethanol, and overproduction of GroESL
substrates.
Recently, the GroE chaperonin machine has been shown
to be a major modulator of the regulation of the genes of the CIRCE
regulon (21). The heat shock regulation of
hrcA-bgaB and groE-bgaB transcriptional fusions
both carrying the CIRCE element could be reconstituted in E. coli by supplying the HrcA repressor under control of a constitutive promoter (21, 42). Heat shock, ethanol stress, and treatment with puromycin most probably produce nonnative proteins and thereby titrate the GroE chaperonin system. This in turn may lead
to an accumulation of inactive HrcA repressor and induction of the
CIRCE regulon (21). We asked whether this mechanism might also trigger induction of an hrcA-bgaB fusion in E. coli. To test this hypothesis, E. coli DH10B harboring
plasmid pAM101 (21), which synthesizes HrcA from a
constitutive promoter and carries a transcriptional fusion between the
CIRCE-controlled hrcA promoter and bgaB, was
challenged with different stress regimens. In agreement with previous
data,
-galactosidase activity increased rapidly within 15 min when
this strain was grown in LB at 30°C and shifted to 42°C (Table 2
and reference 21). Treatment of DH10B with 5%
(vol/vol) ethanol was as effective as the heat shock in induction, whereas 4% NaCl failed to induce expression of hrcA-bgaB
(Table 2).
If indeed nonnative proteins are the signal for induction of class I
genes in E. coli as assumed for B. subtilis, then
overproduction of GroE substrates should induce the
hrcA-bgaB fusion indirectly by titrating GroEL.
E. coli DH10B was transformed with plasmid pREP9
(15) or recombinant derivatives carrying either
tst, lucI, or cbbM under the control
of an isopropyl-
-D-thiogalactopyranoside (IPTG)-inducible promoter. Growth in the presence of IPTG
caused overproduction of chloramphenicol acetyltransferase,
rhodanese, luciferase, and RubisCO (Fig.
3A). Chloramphenicol
acetyltransferase accumulated to levels at least as high
as those for the other three proteins (Fig. 3A) and remained almost
completely in the soluble fraction (Fig. 3B and C). In contrast,
overexpression of rhodanese, luciferase, and RubisCO resulted in the
accumulation of considerable amounts of the proteins in the insoluble
fraction, with luciferase occurring almost exclusively in this fraction (Fig. 3B and C). This formation of inclusion bodies was accompanied by
a low but reproducible induction of the hrcA-bgaB fusion in E. coli (Table 3). Since
overproduction of chloramphenicol acetyltransferase, which is not a
substrate of the GroE system (6, 14), did not induce the
hrcA-bgaB fusion (Table 3), overproduction of a protein per
se cannot be the signal for the induction of CIRCE-regulated genes.
Rather, overproduction of substrates of the GroESL chaperonin system,
such as rhodanese which requires multiple GroE-driven reaction cycles
for proper folding (6), might lead to a titration of GroEL
and cause the increased expression of the hrcA-bgaB fusion.

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FIG. 3.
Overproduction and localization of chloramphenicol
acetyltransferase and GroEL substrates in E. coli. E. coli DH10B transformed with pREP9, pREP9-tst,
pREP9-lucI, or pREP9-cbbM, permitting
overproduction of chloramphenicol acetyltransferase (cat),
rhodanese (tst), luciferase (lucI), or RubisCO
(cbbM), respectively, were grown to mid-exponential phase
and induced with 1 mM IPTG. (A) Whole-cell fractions corresponding to
identical amounts of cell culture were collected before ( ) or 2 h after (+) the addition of IPTG and resolved by SDS-PAGE. Molecular
masses (in kilodaltons) of marker proteins (M) are given; arrowheads
indicate localization of the overproduced proteins. (B) Soluble (s) and
insoluble (i) fractions of an extract prepared from a culture induced
for 2 h with IPTG were prepared as described in Materials and
Methods. Aliquots corresponding to identical amounts of cell culture
were loaded onto all lanes. (C) Samples identical to those in panel B
were resolved by SDS-PAGE and transferred to nitrocellulose. The
membranes were probed with anti-chloramphenicol acetyltransferase,
antirhodanese, antiluciferase, or anti-RubisCO antibodies and developed
by a colorimetric assay.
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Variations of the level of GroEL in E. coli influence
the expression of an hrcA-bgaB fusion.
Because
overproduction of heterologous proteins acts most likely indirectly by
sequestering the GroE chaperonin, varying the level of GroESL in
E. coli should affect expression of class I genes in a way
similar to that described for B. subtilis (21). To test this assumption, we examined whether depletion of the GroE
proteins in E. coli would result in induction of an
hrcA-bgaB transcriptional fusion. To this end, E. coli A190 in which the chromosomal groEL gene has been
replaced by a kanamycin resistance cassette and which carries the
groEL gene on a plasmid under the control of the
PBAD promoter (12) was transformed with pAM103, a tetracycline-resistant derivative of pAM101 carrying an
hrcA-bgaB operon fusion (21). This strain was
then grown in the presence of different arabinose concentrations, and
-galactosidase activities were measured. The lowest enzymatic
activity was measured in the presence of 0.2% arabinose (Fig.
4). Decreasing the sugar concentration reduced the level of GroEL as determined by immunoblotting (data not
shown) and simultaneously increased expression of the
hrcA-bgaB fusion. Addition of the anti-inducer glucose
increased the level of
-galactosidase even further (Fig. 4).

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FIG. 4.
Depletion of GroEL induces an hrcA-bgaB
transcriptional fusion in E. coli. E. coli A190
carrying the two plasmids pAM103 and pBAD33-groESL
(expressing the E. coli groESL genes) was grown in the
presence of 0.2% arabinose in LB overnight. The cells were then washed
to remove the inducer arabinose and resuspended in LB medium either in
the absence or in the presence of the indicated arabinose
concentrations or in the presence of 0.5% glucose as anti-inducer.
Expression of the hrcA-bgaB transcriptional fusion expressed
from pAM103 was assayed 4 h after the resuspension. A, 0.2%
arabinose; B, 0.06% arabinose; C, 0.02% arabinose; D, no arabinose;
E, 0.5% glucose.
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In contrast to the latter results, preloading the cells with E. coli GroESL proteins should reduce a later heat shock induction of
the hrcA-bgaB fusion if the E. coli GroE
chaperone machine can fully substitute for GroESL of B. subtilis in this regulation. Addition of 0.2% arabinose to the
growth medium of E. coli DH10B carrying pAM101 and
pBAD33-groESL resulted in overproduction of GroESL proteins
during exponential growth (as visualized by SDS-PAGE and Coomassie blue
staining [data not shown]) and indeed significantly reduced the heat
inducibility of the hrcA-bgaB fusion (Table
4). Arabinose had no effect on the heat
induction in cells containing only the empty vector pBAD33. To support
the notion that the GroESL chaperonins of E. coli and
B. subtilis are functionally exchangeable, the B. subtilis groESL operon was inserted into the vector pREP9. This
recombinant plasmid, pREP9-groESL, complemented E. coli groES30 and groEL100 temperature-sensitive mutants
for growth at the nonpermissive temperature (data not shown) as
previously described for the groE operon of Bacillus
stearothermophilus (28).
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TABLE 4.
Overproduction of E. coli GroESL causes
reduced heat induction of an hrcA-bgaB transcriptional
fusion in E. coli DH10Ba
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In summary, our results clearly show that besides heat shock, other
stimuli such as ethanol and puromycin can induce the heat shock genes
of the CIRCE regulon of B. subtilis. In contrast to class II
heat shock genes, which are induced by entirely different signals,
induction of the CIRCE regulon remains confined to a group of related
stimuli which all most likely produce enhanced amounts of nonnative
proteins. The same signal seems to be responsible for the induction of
these genes after their transfer into E. coli.
There are bacterial species inheriting both the
32 and
the HrcA-CIRCE mechanisms (21). In both cases, negative
autoregulation is guaranteed. Regulation of chaperone expression by
different mechanisms also allows specific induction of the
groE operon when increased amounts of GroE proteins are
specifically needed, e.g., in R. capsulatus and in
Synechococcus spp. RubisCO is a substrate for GroEL, and
synthesis of RubisCO is accompanied by an increase in the amount of
GroE proteins (36).
We propose that titration of the GroE chaperonin by increased levels of
nonnative proteins presumably prevents (re)activation of the HrcA
repressor and therefore might permit increased expression of class I
heat shock genes. This proposed mechanism of negative autoregulation
might ensure a rapid activation and deactivation of the genes of the
CIRCE regulon. In addition, this kind of regulation permits precise
fine adjustments, to ensure the adequate production of molecular
chaperones depending on the growth temperature and other physiological
conditions.
 |
ACKNOWLEDGMENTS |
A. Mogk and A. Völker contributed equally to this work.
We thank A. Harang for excellent technical assistance, B. Bukau for
pDS12-Placwt-9A-lucI and the antibodies against
luciferase and chloramphenicol acetyltransferase, M. Ehrmann for
pBAD33, U. Hartl for the antibody against rhodanese, G. Klug for
chromosomal DNA of R. capsulatus, T. Langer for plasmid
pQE40-tst, P. Lund for E. coli A190, and F. R. Tabita for the antibody against RubisCO.
This work was supported by grants from the Deutsche
Forschungsgemeinschaft (He 1887/2-4 to M. Hecker, Schu 414/9-4 to W. Schumann, and Vö 629/2-2 to U. Völker) and the Fonds der
Chemischen Industrie to M. Hecker, W. Schumann, and U. Völker.
 |
FOOTNOTES |
*
Corresponding author. Mailing address:
Philipps-Universität, Laboratorium für Mikrobiologie,
Karl-von-Frisch-Strasse, 35043 Marburg, Germany. Phone: 49 6421 283478. Fax: 49 6421 288979. E-mail:
voelker{at}su1701.biologie.uni-marburg.de.
 |
REFERENCES |
| 1.
|
Antelmann, H.,
J. Bernhardt,
R. Schmid,
H. Mach,
U. Völker, and M. Hecker.
1997.
First steps from a two-dimensional protein index towards a response-regulation map for Bacillus subtilis.
Electrophoresis
18:1451-1463[Medline].
|
| 2.
|
Antelmann, H.,
S. Engelmann,
R. Schmid, and M. Hecker.
1996.
General and oxidative stress responses in Bacillus subtilis: cloning, expression, and mutation of the alkyl hydroperoxide reductase operon.
J. Bacteriol.
178:6571-6578[Abstract/Free Full Text].
|
| 3.
|
Benson, A. K., and W. G. Haldenwang.
1993.
Bacillus subtilis B is regulated by a binding protein (RsbW) that blocks its association with core RNA polymerase.
Proc. Natl. Acad. Sci. USA
90:2330-2334[Abstract/Free Full Text].
|
| 4.
|
Craig, E. A., and C. A. Gross.
1991.
Is hsp70 the cellular thermometer?
Trends Biochem. Sci.
16:135-140[Medline].
|
| 5.
|
Derre, I., and T. Msadek.
1997.
In
Presented at the 9th International Conference on Bacilli, Lausanne, Switzerland
.
|
| 6.
|
Ewalt, K. L.,
J. P. Hendrick,
W. A. Houry, and F. U. Hartl.
1997.
In vivo observation of polypeptide flux through the bacterial chaperonin system.
Cell
90:491-500[Medline].
|
| 7.
|
Gamer, J.,
G. Multhaup,
T. Tomoyasu,
J. S. McCarty,
S. Rudiger,
H. J. Schonfeld,
C. Schirra,
H. Bujard, and B. Bukau.
1996.
A cycle of binding and release of the DnaK, DnaJ and GrpE chaperones regulates activity of the Escherichia coli heat shock transcription factor 32.
EMBO J.
15:607-617[Medline].
|
| 8.
|
Grossman, A. D.,
D. B. Straus,
W. A. Walter, and C. A. Gross.
1987.
32 synthesis can regulate the synthesis of heat shock proteins in Escherichia coli.
Genes Dev.
1:179-184[Abstract/Free Full Text].
|
| 9.
|
Guzman, L. M.,
D. Belin,
M. J. Carson, and J. Beckwith.
1995.
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter.
J. Bacteriol.
177:4121-4130[Abstract/Free Full Text].
|
| 10.
|
Hecker, M.,
W. Schumann, and U. Völker.
1996.
Heat-shock and general stress response in Bacillus subtilis.
Mol. Microbiol.
19:417-428[Medline].
|
| 11.
|
Hecker, M., and U. Völker.
1990.
General stress proteins in Bacillus subtilis.
FEMS Microbiol. Ecol.
74:197-213.
|
| 12.
|
Ivic, A.,
D. Olden,
E. J. Wallington, and P. A. Lund.
1997.
Deletion of Escherichia coli groEL is complemented by a Rhizobium leguminosarum groEL homologue at 37°C but not at 43°C.
Gene
194:1-8[Medline].
|
| 13.
|
Jenkins, D. E.,
E. A. Auger, and A. Matin.
1991.
Role of RpoH, a heat shock regulator protein, in Escherichia coli carbon starvation protein synthesis and survival.
J. Bacteriol.
173:1992-1996[Abstract/Free Full Text].
|
| 14.
|
Kim, H. B., and C. Kang.
1991.
Activity of chloramphenicol acetyltransferase overproduced in E. coli with wild type and mutant GroEL.
Biochem. Int.
25:381-386[Medline].
|
| 15.
|
LeGrice, S. F.
1990.
Regulated promoter for high-level expression of heterologous genes in Bacillus subtilis, p. 201-214.
In
D. V. Goeddel (ed.), Gene expression technology. Academic Press, London, England.
|
| 16.
|
Liberek, K., and C. Georgopoulos.
1993.
Autoregulation of the Escherichia coli heat shock response by the DnaK and DnaJ heat shock proteins.
Proc. Natl. Acad. Sci. USA
90:11019-11023[Abstract/Free Full Text].
|
| 17.
|
Majumdar, D.,
Y. J. Avissar, and J. H. Wyche.
1991.
Simultaneous and rapid isolation of bacterial and eukaryotic DNA and RNA a new approach for isolating DNA.
BioTechniques
11:94-101.
[Medline] |
| 18.
|
Maul, B.,
U. Völker,
S. Riethdorf,
S. Engelmann, and M. Hecker.
1995.
B-dependent regulation of gsiB in response to multiple stimuli in Bacillus subtilis.
Mol. Gen. Genet.
248:114-120[Medline].
|
| 19.
|
Meury, J., and M. Kohiyama.
1991.
Role of heat shock protein DnaK in osmotic adaptation of Escherichia coli.
J. Bacteriol.
173:4404-4410[Abstract/Free Full Text].
|
| 20.
|
Mogk, A.,
R. Hayward, and W. Schumann.
1996.
Integrative vectors for constructing single-copy transcriptional fusions between Bacillus subtilis promoters and various reporter genes encoding heat-stable enzymes.
Gene
182:33-36[Medline].
|
| 21.
|
Mogk, A.,
G. Homuth,
C. Scholz,
L. Kim,
F. X. Schmid, and W. Schumann.
1997.
The groE chaperonin machine is a major modulator of the CIRCE heat shock regulon of Bacillus subtilis.
EMBO J.
16:4579-4590[Medline].
|
| 22.
|
Neidhardt, F. C., and R. A. VanBogelen.
1987.
Heat shock response, p. 1334-1345.
In
F. Neidhardt, J. Ingraham, K. Low, B. Magasanik, M. Schaechter, and H. Umbarger (ed.), Escherichia coli and Salmonella typhimurium: cellular and molecular biology. American Society for Microbiology, Washington, D.C.
|
| 23.
|
Nover, L.
1991.
Inducers of Hsp synthesis: heat shock and chemical stressors, p. 5-40.
In
L. Nover (ed.), Heat shock response. CRC Press, Boca Raton, Fla.
|
| 24.
|
Saito, H.,
T. Sibata, and T. Ando.
1979.
Mapping of genes determining nonpermissiveness and host-specific restriction to bacteriophages in Bacillus subtilis Marburg.
Mol. Gen. Genet.
170:117-122[Medline].
|
| 25.
|
Sambrook, J.,
J. Fritsch, and T. Maniatis.
1989.
In
Molecular cloning: a laboratory manual, 2nd ed.
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
|
| 26.
|
Scharf, C.,
S. Riethdorf,
H. Ernst,
S. Engelmann,
U. Völker, and M. Hecker.
1998.
Thioredoxin is an essential protein induced by multiple stresses in Bacillus subtilis.
J. Bacteriol.
180:1869-1877[Abstract/Free Full Text].
|
| 27.
|
Schmidt, A.,
M. Schiesswohl,
U. Völker,
M. Hecker, and W. Schumann.
1992.
Cloning, sequencing, mapping, and transcriptional analysis of the groESL operon from Bacillus subtilis.
J. Bacteriol.
174:3993-3999[Abstract/Free Full Text].
|
| 28.
|
Schon, U., and W. Schumann.
1995.
Overproduction, purification and characterization of GroES and GroEL from thermophilic Bacillus stearothermophilus.
FEMS Microbiol. Lett.
134:183-188[Medline].
|
| 29.
|
Schön, U., and W. Schumann.
1994.
Construction of His6-tagging vectors allowing single-step purification of GroES and other polypeptides produced in Bacillus subtilis.
Gene
147:91-94[Medline].
|
| 30.
|
Schulz, A., and W. Schumann.
1996.
hrcA, the first gene of the Bacillus subtilis dnaK operon, encodes a negative regulator of class I heat shock genes.
J. Bacteriol.
178:1088-1093[Abstract/Free Full Text].
|
| 31.
|
Schulz, A.,
S. Schwab,
G. Homuth,
S. Versteeg, and W. Schumann.
1997.
The htpG gene of Bacillus subtilis belongs to class III heat shock genes and is under negative control.
J. Bacteriol.
179:3103-3109[Abstract/Free Full Text].
|
| 32.
|
Schulz, A.,
B. Tzschaschel, and W. Schumann.
1995.
Isolation and analysis of mutants of the dnaK operon of Bacillus subtilis.
Mol. Microbiol.
15:421-429[Medline].
|
| 33.
|
Skelly, S.,
T. Coleman,
C. F. Fu,
N. Brot, and H. Weissbach.
1987.
Correlation between the 32-kDa factor levels and in vitro expression of Escherichia coli heat shock genes.
Proc. Natl. Acad. Sci. USA
84:8365-8369[Abstract/Free Full Text].
|
| 34.
|
Straus, D.,
W. Walter, and C. A. Gross.
1990.
DnaK, DnaJ, and GrpE heat shock proteins negatively regulate heat shock gene expression by controlling the synthesis and stability of 32.
Genes Dev.
4:2202-2209[Abstract/Free Full Text].
|
| 35.
|
Straus, D. B.,
W. A. Walter, and C. A. Gross.
1987.
The heat shock response of Escherichia coli is regulated by changes in the concentration of 32.
Nature
329:348-351[Medline].
|
| 36.
|
Terlesky, K. C., and F. R. Tabita.
1991.
Purification and characterization of the chaperonin 10 and chaperonin 60 proteins from Rhodobacter sphaeroides.
Biochemistry
30:8181-8186[Medline].
|
| 37.
|
Tilly, K.,
J. Spence, and C. Georgopoulos.
1989.
Modulation of stability of the Escherichia coli heat shock regulatory factor 32.
J. Bacteriol.
171:1585-1589[Abstract/Free Full Text].
|
| 38.
|
Tomoyasu, T.,
J. Gamer,
B. Bukau,
M. Kanemori,
H. Mori,
A. J. Rutman,
A. B. Oppenheim,
T. Yura,
K. Yamanaka,
H. Niki,
S. Hiraga, and T. Ogura.
1995.
Escherichia coli FtsH is a membrane-bound, ATP-dependent protease which degrades the heat-shock transcription factor 32.
EMBO J.
14:2551-2560[Medline].
|
| 39.
|
Völker, U.,
S. Engelmann,
B. Maul,
S. Riethdorf,
A. Völker,
R. Schmid,
H. Mach, and M. Hecker.
1994.
Analysis of the induction of general stress proteins of Bacillus subtilis.
Microbiology
140:741-752[Abstract].
|
| 40.
|
Völker, U.,
A. Völker,
B. Maul,
M. Hecker,
A. Dufour, and W. G. Haldenwang.
1995.
Separate mechanisms activate B of Bacillus subtilis in response to environmental and metabolic stresses.
J. Bacteriol.
177:3771-3780[Abstract/Free Full Text].
|
| 41.
|
Yasbin, R. E.,
G. A. Wilson, and T. E. Young.
1973.
Transformation and transfection of lysogenic strains of Bacillus subtilis 168.
J. Bacteriol.
113:540-548[Abstract/Free Full Text].
|
| 42.
|
Yuan, G., and S. L. Wong.
1995.
Isolation and characterization of Bacillus subtilis groE regulatory mutants: evidence for orf39 in the dnaK operon as a repressor gene in regulating the expression of both groE and dnaK.
J. Bacteriol.
177:6462-6468[Abstract/Free Full Text].
|
| 43.
|
Zuber, U., and W. Schumann.
1994.
CIRCE, a novel heat shock element involved in regulation of the heat shock operon dnaK of Bacillus subtilis.
J. Bacteriol.
176:1359-1363[Abstract/Free Full Text].
|
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