Journal of Bacteriology, August 1998, p. 3873-3881, Vol. 180, No. 15
0021-9193/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Department of Dairy and Food Science,
Received 24 November 1997/Accepted 28 May 1998
The bacterial heat shock response is characterized by the elevated
expression of a number of chaperone complexes and proteases, including the DnaK-GrpE-DnaJ and the GroELS chaperone complexes. In
order to investigate the importance of the DnaK chaperone complex for growth and heat shock response regulation in Lactococcus
lactis, we have constructed two dnaK mutants with
C-terminal deletions in dnaK. The minor deletion of 65 amino acids in the dnaK DnaK is a bacterial member of the
highly conserved, ubiquitous family of 70-kDa heat-shock-induced
chaperone proteins (Hsp70 proteins). Genes encoding DnaK have been
sequenced from many species, but functional studies have mainly been
carried out with eucaryotes and with the gram-negative bacterium
Escherichia coli. More recently, such studies have also been
conducted with the gram-positive bacterium Bacillus
subtilis (34, 43). Studies with E. coli have shown that DnaK functions as a chaperone in
collaboration with DnaJ and GrpE and that this chaperone complex plays
a significant role in the folding of nascent protein chains during
normal growth conditions and in the refolding of proteins after thermal
damage (5, 6, 8, 36, 44, 53; for reviews, see
references 4 and 17).
Furthermore, the DnaK-DnaJ-GrpE chaperone complex participates in
ATP-dependent proteolysis in the cell (for a review, see reference
31). The eucaryotic DnaK homolog (Hsp70) was shown to contain an amino-terminal ATP binding domain and a substrate binding
domain located immediately after the ATP binding domain. A study of the
binding properties of an internal Hsp70 polypeptide covering amino
acids Ser-384 to Glu-543, located immediately after the ATPase domain,
indicated that the peptide binding domain of Hsp70 is confined within
this fragment (51). The C-terminal fragment from amino acid
546 (9) was found to be involved in neither ATP nor
substrate binding, yet several studies have indicated that the C
terminus is needed for full DnaK activity in eucaryotes (9,
14).
A comparison of the data from E. coli and B. subtilis suggests essential differences between the functions of
DnaK in these two bacterial genera. In E. coli,
dnaK expression is induced by heat as well as by other
stress factors, such as acid stress (19), osmotic stress
(33), and carbon starvation (23), indicating that
DnaK is involved in the general stress response of E. coli. This finding has been confirmed by the phenotypes of isolated dnaK mutants (5, 7, 33, 45). In B. subtilis, DnaK is induced by heat but not by the addition of salt
or by glucose limitation (50), indicating a more
limited role in stress response than that found in E. coli.
This finding is in accordance with the phenotype displayed by a
dnaK insertion mutant (43).
The molecular bases for the regulation of the expression of
dnaK and the major heat shock genes are very different in
E. coli and B. subtilis. In E. coli, transcription of the dnaKJ operon is
stimulated by increased amounts of the heat shock sigma factor In B. subtilis, three classes of heat-induced genes have
been found. The dnaK operon, belonging to class I,
has been shown to be negatively regulated by a repressor. The repressor
is encoded by the hrcA gene, the first gene in the
dnaK operon (42, 55). The hrcA
gene is followed by grpE, dnaK, dnaJ,
and three other genes of unknown function (18, 21, 42). An
hrcA deletion mutation results in high levels of
constitutive expression of both the dnaK operon and
the groESL operon, which is also of class I. The
groESL operon encodes another important chaperone
complex. Inactivation of dnaK in B. subtilis
results in a slight temperature-sensitive phenotype, and no increase in
the expression of other genes in the dnaK and the
groELS operons has been observed (34).
Thus, apparently DnaK is not involved in the regulation of the
expression of general heat shock-induced chaperones in B. subtilis. The operator regions in front of the
dnaK and groELS operons in B. subtilis contain binding sites for the HrcA repressor.
The operator sequences are termed CIRCE, for controlling inverted
repeats for chaperone expression, are preserved in many bacterial
genera, and are found in the corresponding operons
encoding the major heat shock-induced chaperones (18, 38).
The gram-positive bacterium Lactococcus lactis has been
found to elicit a heat shock response similar to that of other bacteria (1, 28, 52), and the temporal induction patterns suggest that the heat shock proteins fall in more than one induction
class. Apparently, DnaK, GroEL, and GroES fall in the same
class, consistent with the finding that both the
hrcA (orf1)-grpE-dnaK
operon and the groESL operon of L. lactis contain CIRCE-like elements in the promoter regions
(13, 29). Also, the dnaJ gene has been shown to
contain the CIRCE element (49). Since dnaK
mutants of E. coli and B. subtilis have
different phenotypes, we wanted to analyze whether the heat shock
response is altered in dnaK mutants of L. lactis.
For this purpose, two C-terminal deletion mutants were
constructed. The most severe mutation removed a major part of the
putative substrate binding site of DnaK. Like the E. coli
dnaK mutants, this mutant was found to be temperature sensitive for growth and to contain elevated levels of other heat shock proteins at 30°C. In contrast to the E. coli
mutants, the lactococcal mutant was able to develop
thermotolerance, although not as efficiently as the wild type.
Possible implications of these results are discussed.
In the second dnaK mutant, only the extreme C-terminal part
of the dnaK gene was deleted. This mutant differed
slightly from the wild type with respect to temperature
sensitivity.
Strains and growth conditions.
Table
1 lists the strains used in the present
study and how they were constructed. The lactococcal strains used are
all derivatives of the plasmid-free prophage-cured strain MG1363
(15). For the growth of L. lactis strains, M17
medium (47) and chemically defined SA medium (24)
supplemented with 0.5% glucose (GM17) and 1% glucose, respectively,
were used. When required, erythromycin was added at a final
concentration of 2 µg/ml. E. coli recombinant strains were grown in LB medium (40) with the addition of
ampicillin at 50 µg/ml.
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ABSTRACT
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Abstract
Introduction
Materials & Methods
Results
Discussion
References
2 mutant resulted in a slight
temperature-sensitive phenotype. BK6, containing the larger deletion of
174 amino acids (dnaK
1), removing the major part of the
inferred substrate binding site of the DnaK protein, exhibited a
pronounced temperature-sensitive phenotype and showed altered
regulation of the heat shock response. The expression of the heat shock
proteins was increased at the normal growth temperature, measured
as both protein synthesis rates and mRNA levels, indicating that DnaK
could be involved in the regulation of the heat shock response in
L. lactis. For Bacillus subtilis, it has been
found (A. Mogk, G. Homuth, C. Scholz, L. Kim, F. X. Schmid, and W. Schumann, EMBO J. 16:4579-4590, 1997) that the activity
of the heat shock repressor HrcA is dependent on the chaperone function
of the GroELS complex and that a dnaK insertion mutant has
no effect on the expression of the heat shock proteins. The present
data from L. lactis suggest that the
DnaK protein could be involved in the maturation of the homologous HrcA
protein in this bacterium.
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INTRODUCTION
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Abstract
Introduction
Materials & Methods
Results
Discussion
References
32 at elevated temperatures. At normal temperatures,
32 is highly unstable and is degraded by the proteolytic
activity of the HflB (FtsH) protease in consort with the DnaK chaperone complex. DnaK is thus a negative factor in the regulation of the heat shock response in E. coli. Elevated growth
temperatures prevent the degradation of
32, presumably
by sequestering the DnaK chaperone complex with misfolded proteins,
thus inhibiting the degradation of
32. In accordance
with this model, mutations in dnaK, dnaJ, and grpE result in increased expression of the heat shock genes,
even in the exponential growth phase, at normal temperatures (46, 48).
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MATERIALS AND METHODS
Top
Abstract
Introduction
Materials & Methods
Results
Discussion
References
TABLE 1.
Strains and plasmids used in this study
Analysis of thermotolerance. At an OD600 of 0.4, cells from exponentially growing cultures in GM17 were harvested and resuspended in the same volume of GM17 with or without erythromycin in glass tubes with a diameter of 1 cm. After 30 min of incubation at 30 or 40°C, the tubes were placed in a 53°C water bath. The number of viable cells was determined as CFU on GM17 agar plates after 0, 15, 30, 45, and 60 min of incubation at 53°C.
DNA manipulations. The plasmids constructed in the present study are listed in Table 1. The plasmids were selected in E. coli XL1-Blue (Stratagene). For plasmid construction, standard E. coli techniques were used (40). Southern analysis was carried out as previously described (30) with lactococcal chromosomal DNA prepared as previously described (25).
PCR amplification was carried out either with purified chromosomal DNA or directly as colony PCR with a smear of a bacterial colony as the substrate under standard conditions. For colony PCR with Lactococcus colonies, the cells were treated with 0.1 M NaOH for 30 min at 97°C, vortexed with glass beads, and neutralized with HCl and Tris (pH 7.5) prior to PCR.Plasmid construction. Plasmid pBK100 was constructed by inserting a ScaI-EcoRI fragment from pFI573, containing part of dnaK, into the SmaI and EcoRI sites of the pBluescriptSKII+ vector. Plasmid pBK102 was constructed by inserting an HpaI-PstI fragment from pFI573 into the PstI and HincII sites of the pBluescriptSKII+ vector. Plasmid pBK104 was constructed by inserting an HaeII-EcoRI fragment from pFI573 into the SmaI and EcoRI sites of the pBluescriptSKII+ vector. The HaeII site had been blunted with T4 DNA polymerase before pFI573 was digested with EcoRI. Plasmids pBK101, pBK103, and pBK105 were constructed by inserting a BamHI fragment containing a functional erm gene from plasmid pUC7erm (10) into the BamHI sites of plasmids pBK100, pBK102, and pBK104, respectively.
Integration of plasmids into the L. lactis chromosome. Competent L. lactis cells were transformed by electroporation essentially as previously described (20). One microgram of plasmid DNA was used in each transformation. Selection of erythromycin-resistant transformants was performed on SR plates (20) containing 2 µg of erythromycin per ml.
Confirmation of plasmid integration. To confirm the site of integration, Southern analysis and PCR analysis were carried out. The chromosomal DNA was digested with PstI; an internal EcoRI-PstI fragment from dnaK was used as a probe. For MG1363, a single fragment larger than 10 kb hybridized to the probe. The integrants BK6, BK8, and BK11 all gave two fragments: one of the same size as that found in MG1363 and the additional fragment having a mobility corresponding to the theoretical size of 4,948, 5,276, or 5,074 bp, respectively. PCR analysis was carried out either with chromosomal DNA or directly as colony PCR. The following PCR primers were used: MKP1 (5'-GCA ACT GCT GAA AGC TAC CTT-3'), which corresponds to a sequence in dnaK before the site of integration; ERM1 (5'-CTA TGA GTC GCT TTT GT-3') and ERM2 (5'-GTT TCC GCC ATT CTT TG-3'), which both correspond to sequences in the erythromycin resistance cassette; and PCK3719 (5'-GTC GCC ATC AAA TGT ATT-3'), which corresponds to a sequence in the C-terminal part of dnaK. When primers MKP1 and ERM1 were used, PCR products corresponding to the theoretical sizes of 1,112 and 1,446 bp were produced from BK6 and BK11, respectively. BK8 gave a PCR product corresponding to the theoretical size of 1,670 bp when primers MKP1 and ERM2 were used.
PCK3719 and MKP1 were used to confirm the absence of intact dnaK in BK6 and BK11. In these experiments, BK8 and MG1363 were used as controls and gave the expected 1,495-bp PCR product, while no PCR product was obtained from BK6 and BK11.Curing of L. lactis strains for the integrated plasmids. Liquid GM17 was inoculated with integrants grown on a GM17 agar plate containing erythromycin, and the culture was incubated overnight. A 1% dilution of the overnight culture in GM17 was subsequently incubated overnight. Cured strains were obtained from this culture by screening for erythromycin-sensitive colonies.
Northern blotting. At an OD600 of 0.4, cells from GM17 cultures were harvested either directly or after incubation for 15 min at 43°C. RNA isolation and Northern blotting were carried out as previously described (1). The following probes were used for hybridization: a 1,704-bp (dnaK) DraI fragment from pFI573 (13), a 576-bp (orf1) HindIII-BstEII fragment from pFI573, a 1,392-bp (ftsH) HindIII fragment from pLN32 (35), and a 726-bp (dnaJ) HindIII fragment from pKS2 (1).
Western blotting. Total cell proteins were extracted essentially as described previously (28) from cells harvested at an OD600 of 0.4. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (PAGE) was carried out on a 12% acrylamide gel (29:1 acrylamide-bisacrylamide; Bio-Rad). The gel was transferred by semidry electroblotting to an Immobilon-P membrane (Millipore) as recommended by the supplier. Chemiluminescence detection of DnaK with rabbit antibodies against DnaK from B. subtilis and horseradish peroxidase-conjugated secondary antibodies was performed with an Amersham ECL Western blotting analysis system.
2D gel analysis. Cells were grown in SA medium with reduced amounts of unlabelled methionine. Labelling with [35S]methionine, harvesting, extraction, and two-dimensional (2D) gel analysis were performed as described previously (28).
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RESULTS |
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Construction of dnaK mutants. The dnaK operon from L. lactis, consisting of hrcA (orf1)-grpE-dnaK, was cloned and sequenced by Eaton et al. (13). Downstream of dnaK a putative transcriptional terminator structure was identified; the structure was followed by an open reading frame (orf4) with no similarity to known protein genes. Transcriptional analysis previously showed that orf4 expression was not induced by heat shock, in contrast to the expression of the dnaK operon, arguing that transcription does not proceed past the terminator structure (1). Therefore, since dnaK is the last gene of the operon, it should be possible to delete different parts of the dnaK gene in L. lactis by insertion mutagenesis without creating polar effects on downstream genes in the operon. We used this strategy to construct two different dnaK deletion mutants of MG1363 by homologous recombination of nonreplicating plasmids carrying internal fragments of the dnaK operon into the chromosome.
Mutant BK6 was obtained by integration of plasmid pBK103, which contains an 873-bp HpaI-PstI internal fragment of dnaK. The resulting C-terminal deletion (dnaK
1) from the PstI site in dnaK is shown in Fig. 1B. Similarly,
mutant BK11 (dnaK
2) was obtained by integration of
pBK105, which contains a 999-bp EcoRI-HaeII fragment of dnaK. The resulting C-terminal deletion from the
HaeII site in dnaK is shown in Fig. 1B. In
order to obtain an erythromycin-resistant control strain for the BK6
and BK11 mutants, we integrated plasmid pBK101 into strain MG1363.
Plasmid pBK101 contains a 1,201-bp EcoRI-ScaI DNA
fragment with most of the dnaK gene, including the
entire C-terminal sequence. The integration event resulted in
strain BK8, which carried no gene disruptions. The correct integration of the plasmids was verified by both PCR and Southern blotting as described in Materials and Methods (data not shown).
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1 mutant BK6, 522 bp of the 3' end of the
dnaK gene is deleted, specifying 174 amino acid residues,
while the vector sequence adds 84 bp to the reading frame before a stop codon is encountered. Thus, a truncated DnaK protein of 49.4 kDa should
be synthesized. In the dnaK
2 mutant BK11, 188 bp (65 amino acids) is deleted, and a truncated DnaK protein of 58.8 kDa
should be synthesized when the addition of five vector-specified codons is taken into account. The full-length DnaK protein has a
calculated molecular mass of 65.0 kDa. We tested if it was possible to
identify the smaller DnaK proteins in the mutant strains by means of
Western blotting with antibodies raised against the purified DnaK
protein from B. subtilis (43). As shown in
Fig. 1D, it was possible to detect mutant proteins with
apparent sizes of 50 and 65 kDa (DnaK
1 and DnaK
2, respectively).
The wild-type DnaK protein had an apparent molecular mass of 70 kDa, as determined previously (28).
Physiological characterization of mutants.
Heat sensitivity is
encountered for all dnaK mutants of both E. coli and B. subtilis. We therefore tested the heat
sensitivity of the lactococcal dnaK mutants by their growth
on GM17 agar at temperatures of 10 to 37°C. At 30°C, which is the
standard growth temperature for L. lactis, colonies
with a 1-mm diameter were formed after 1 day of incubation for both
dnaK+ strains MG1363 and BK8 and the
dnaK
2 mutant BK11, while the dnaK
1 mutant
BK6 required 2 days at 30°C (Table 2).
An equal reduction in the growth rate of BK6, compared to the other
strains, was observed when the strains were grown in liquid GM17 at
30°C (Table 2). When the growth rates of MG1363 and BK8 were
compared, a small negative effect of the addition of erythromycin was
seen. It was also evident that the dnaK
2 mutation in BK11
caused a growth rate slightly lower than that of BK8 containing the
wild-type dnaK allele.
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1 mutation was due to
the deletion in dnaK, the strain was cured of the inserted
plasmid by growth in the absence of erythromycin and screening for
erythromycin-sensitive revertants as described in Materials and
Methods. These revertants, verified by PCR for the loss of the
plasmid, were able to plate at 35 and 37°C, like MG1363, and
showed the same growth rate as MG1363 at 30°C in GM17 (data not
shown). Thus, the temperature-sensitive phenotype of BK6 was indeed due
to the dnaK
1 mutation present in this strain.
The heat sensitivity of the dnaK mutants was further
analyzed by challenging exponentially growing cells at 30°C to the
lethal temperature of 53°C for 60 min and monitoring the
fraction of surviving cells by measuring CFU; the results are shown in
Fig. 2A. The dnaK
1 mutant
BK6 appeared to be more heat sensitive than the control strain, while
no heat-sensitive phenotype could be attributed to the
dnaK
2 mutant BK11.
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1 mutant BK6 was significantly lower than that of the
control strains MG1363 and BK8. From the data in Fig. 2A, however, it
is evident that the mutant strain showed significantly better survival
after pretreatment at 40°C, so the acquisition of thermotolerance by
exposure to sublethal temperatures is possible, even with a severely
damaged DnaK protein. The induction of thermotolerance in the
dnaK
2 mutant BK11 was not significantly different from that in the control strains.
It was previously shown that the heat shock-induced chaperones
DnaK, GroEL, and GroES are induced during salt stress
(28), suggesting a function of the chaperones under this
condition. Therefore, we wanted to determine whether a functional DnaK
protein is required for growth at high salt concentrations. The
addition of 2.5 to 4% NaCl reduced the growth rate of MG1363 in GM17
(data not shown). The growth rate was reduced to the same degree
for both the dnaK mutants BK11 and BK6 and the wild-type
control strain BK8. Thus, neither of the mutants showed altered salt
sensitivity.
Induction of heat shock proteins by the dnaK
1
mutation.
In E. coli, dnaK mutants show
increased synthesis of heat shock-regulated genes, compared to the
wild-type strain, when grown at the normal growth temperature (17,
46, 48). This was not found to be the case for a dnaK
mutant of B. subtilis (43). It was therefore
of considerable interest to test the rate of synthesis of heat
shock-regulated proteins in the dnaK
1 mutant of
L. lactis. The synthesis of both mRNA and proteins was
monitored.
1 mutant BK6 (14-, 7.3-, and 2.3-fold for the three
mRNA species, respectively). In the dnaK
2 mutant BK11,
the mRNA levels were also elevated; however, in this strain they were
only slightly elevated (3.1-, 3.2-, and 1.2-fold, respectively). The
HflB protease, encoded by the hflB gene (35), was
previously inferred to be involved in heat shock regulation in
L. lactis (12). The level of
hflB-specific mRNA was not, however, elevated in either BK6 or BK11 (Table 3).
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1 deletion resulted in the
induction of heat shock proteins when the synthesis rate was visualized by [35S]methionine incorporation (Fig.
3). When the pattern of proteins synthesized in BK8 (dnaK+-erm) during a 15-min
period at 30°C (Fig. 3A) was compared to the pattern in BK6 grown and
labelled under identical conditions (Fig. 3E), most proteins were
labelled at the same relative intensities in the two strains,
indicating that their rates of synthesis were comparable. Some
proteins, however, were much more intensely labelled in BK6, showing
that they were induced in the dnaK mutant. Many of these
induced proteins (GroEL, GroES, Hsp84, Hsp85, and Hsp100) were
identical to the heat stress-induced proteins which were seen when BK8
was subjected to 43°C for 5 min (Fig. 3B) or 30 min (Fig. 3C),
followed by [35S]methionine labelling of the newly
synthesized proteins for 15 min at 43°C. The presence of the
dnaK
1 mutation resulted in a 10-fold increase in both
GroEL and GroES synthesis rates at 30°C (Fig. 3H). The DnaK protein
which was visible in BK8 at both 30 and 43°C was clearly absent in
BK6. However, the truncated DnaK
1 protein which was detected as a
50-kDa protein by Western blotting in Fig. 1D most likely corresponded
to the intensely labelled spot which was located at the position
indicated in Fig. 3E, F, and G and which had no counterpart in Fig. 3A,
B, and C. This position had the coordinates (7 and 80) in the
L. lactis reference gel described elsewhere
(28) from which an apparent molecular mass of 49 kDa and an
isoelectric point of 4.8 could be calculated. These values are in
agreement with the values predicted from the DNA sequence of the
dnaK
1 gene (49.4 kDa; pI, 4.78). The synthesis rate for
this protein was increased fivefold compared to the intensity of the
DnaK spot in Fig. 3A (Fig. 3H).
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1 mutant (Fig. 3H). In the dnaK+ strain, the induction of DnaK exhibited a
peak of synthesis at a 20-fold-elevated level between 5 and 20 min
after subjection to 43°C (Fig. 3D), similar to the heat shock
response in wild-type strain MG1363 (28). In contrast, the
induction of the truncated DnaK
1 protein showed a progressive
increase with time (Fig. 3H), resulting in a modest twofold-elevated
level, but the end-point synthesis level reached for either DnaK
species was about 5% the total synthesis rate. The values for the
incorporation of radioactive methionine in the two proteins could be
directly compared as synthesis rates, since only 1 of the 11 methionine
residues present in DnaK was missing from DnaK
1. The possibility
that the DnaK
1 protein is unstable cannot be ruled out and would
have the effect of underestimating its synthesis rate in Fig. 3H.
Whether the lack of a synthesis peak between 5 and 20 min after heat
shock could be the result of increased degradation during this period
is also not known.
Cell morphology and phage sensitivity of dnaK mutants. For further comparison with the phenotypes of dnaK mutants of E. coli, the lactococcal dnaK mutants were tested for filamentation and propagation of phages. In E. coli, several dnaK mutants have shown filamentous morphology due to defects in cell division (5, 32, 36). Therefore, the cell morphology of MG1363, BK8, BK6, and BK11 was studied after growth at 30°C in GM17 with or without the addition of erythromycin. In exponentially growing (4-h) and overnight (24-h) cultures, MG1363, BK8, and BK11 typically appeared in short chains comprised of 4 to 10 cells in the chain, but in less than 1% of the chains, the chain length was as high as 20 cells. However, in BK6, chains comprised of more than 16 to 20 cells were dominant, and some chains had up to 40 to 60 cells (data not shown). The shape of the individual cells in the chain was not changed.
A dnaK mutant was originally isolated from E. coli as a mutant showing increased phage resistance. It was later shown that DnaK was necessary for the replication of the E. coli phages
and P1 (54, 56) and
for late transcription of the E. coli phage Mu
(41). We therefore tested the dnaK
1 mutant
strain BK6 for sensitivity to lactococcal phages. The lactococcal
phages have been divided into 11 species based on DNA-DNA hybridization (22). We tested lactococcal phages from the two most common groups of phages, namely, the small isometric phages (three phages) and
the prolate phages (one phage), for their ability to form plaques on
BK6. In the plaque assays, we did not see any difference in
plaquing ability or plaque morphology between the mutant strain BK6 and
the wild-type strain MG1363 for the small isometric phages sk1
(37), p2 (26), and
jj50 (27) or the
prolate phage c2 (37).
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DISCUSSION |
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In the present study, we constructed two dnaK
deletion mutants of L. lactis MG1363. The smallest
deletion is found in the dnaK
2 mutant BK11, which
has a deletion of 63 C-terminal amino acids. BK11
differs only slightly from the wild-type strain, but it has one
mutant phenotype; a slight temperature-sensitive phenotype was observed
when cells were plated at 37°C (Table 2). The chain length of growing
BK11 cells is not significantly different from that of the wild-type
cells, indicating that the level of excreted lysozyme is unaltered.
Thermotolerance develops as efficiently in BK11 as in the wild-type
strain, and the mutant was not found to be more susceptible to thermal
killing. This result indicates that the function of DnaK is only
slightly impaired by the dnaK
2 mutation. However, the
existence of a phenotype for this mutant indicates a function of the
distal end of the DnaK protein. A similar deletion mutant of
E. coli showed no phenotype (8).
For the eucaryotic Hsp70 proteins, the amino acids from
Ser-384 to Glu-543 are proposed to constitute the peptide
binding domain (51). Based on alignments, this region
corresponds to amino acids 367 to 510 in the lactococcal DnaK sequence
(data not shown). In the dnaK
1 mutant BK6, the region
from amino acid 432 is deleted. We therefore presume that interactions
with substrates are severely affected in this mutant, but we cannot
exclude the possibility that some residual DnaK activity exists,
especially since the truncated DnaK peptide can be detected, as shown
by Western blotting (Fig. 1D). However, in E. coli it
has been shown that mutants lacking the substrate region have the same
phenotype as mutants lacking the entire protein (36).
BK6 (dnaK
1) is heat sensitive for growth, a
phenotype which is also displayed by both E. coli
and B. subtilis dnaK null mutants. In the E. coli dnaK52 null mutant, elevated temperatures are detrimental, since cells incubated for 2 h at 42°C were found to be incapable of colony formation at 30°C (36) and at 50°C the rate of
killing was found to be much higher for the E. coli
dnaK null mutant than for the wild type (11). The
increased thermosensitivity of the lactococcal dnaK
1
mutant (BK6) is in agreement with the data for the E. coli mutant. BK6 is, however, capable of developing thermotolerance when pretreated at 40°C, although not as efficiently as the wild-type strain (compare BK6 to BK8 in Fig. 2). This acquired thermotolerance was not observed in the E. coli dnaK52
null mutant, which is deficient in the development of both heat- and
starvation-induced thermotolerance (11, 39).
At all temperatures tested (from 10 to 33°C), dnaK
1 BK6
showed reduced growth rates compared to the wild-type strain. This result demonstrates that a functional DnaK protein is needed during normal growth in L. lactis, as has been found for
E. coli mutants. In conclusion, the phenotype of the
lactococcal dnaK
1 mutant resembles the severe effects in
the E. coli mutants more than the modest
temperature-sensitive phenotype of the dnaK mutant isolated
from B. subtilis (43).
A major point of interest in this study was to test how a defective DnaK protein would affect the expression of heat shock-induced chaperones. In E. coli, the DnaK chaperone complex is known to be the sensor of denatured proteins, and the availability of the complex determines the rate of proteolysis of the heat shock sigma factor (16, 46). A dnaK mutant has impaired proteolysis of the sigma factor and therefore contains increased levels of heat shock proteins at the normal growth temperature and shows greatly diminished shutoff of protein synthesis after heat shock. If the availability of the DnaK chaperone complex could also function as a sensor of denatured proteins in HrcA-regulated organisms, then the HrcA heat shock repressor would be expected to be dependent upon the DnaK complex for activity. During heat shock, when the complex is sequestered by denatured proteins, the repressor might not mature properly, leading to increased expression from CIRCE-regulated promoters. Recently, however, it was reported that the GroELS chaperone complex, and not the DnaK complex, is the sensor of denatured proteins in B. subtilis (34). Also, in Bradyrhizobium japonicum, a functional groEL gene product seems to be necessary for the repression of the CIRCE-regulated groELS4 operon at the lower growth temperature (2). For B. subtilis the conclusion was partly based upon the fact that a dnaK null mutation does not result in increased expression of CIRCE-regulated genes, as it should if DnaK were needed for repressor activity.
The orf1 gene in the dnaK operon of
L. lactis has high similarity to
hrcA of B. subtilis. Since L. lactis has an HrcA-like protein and CIRCE regulatory elements just
like B. subtilis, we expected that BK6 would not
overexpress chaperones, but much to our surprise the defect in
the lactococcal dnaK
1 mutant resulted in increased
expression of all of the known CIRCE-containing operons: dnaJ (Table 3), groELS (Fig. 3), and the
dnaK operon itself (Table 3 and Fig. 3). It
therefore appears that the dnaK
1 mutation does influence
HrcA activity in L. lactis. Yet, the activity of HrcA
is not likely to be solely dependent upon the DnaK chaperone complex,
because BK6 can still acquire thermotolerance and can still elicit a
limited heat shock response. The induction of the heat shock proteins
in BK6 is due to the dnaK
1 mutation and is not an
indirect effect of the slow growth rate of this mutant, since
reduced growth rates in purine- and pyrimidine-requiring mutants
do not induce heat shock proteins (27a). It is also unlikely that the effect is due to the presence of the integrated plasmid, e.g.,
by the production of an antisense RNA from a plasmid promoter which
could prevent hrcA, grpE, or dnaK
translation. We did not observe any such RNA species in a
Northern analysis in which a double-stranded DNA fragment was used as
probe (Table 3). Accordingly, no promoter is known to be present
in the plasmid immediately downstream of dnaK.
Concerning the role of the DnaK chaperone complex in HrcA
stabilization, it is noteworthy that the dnaK mutant of
B. subtilis is polar for the expression of the
downstream genes. The downstream genes are, however, constitutively
expressed from a vegetative promoter immediately upstream of
dnaJ, resulting in the expression of dnaJ at a
reduced level (21, 43). Also, the dnaK
52
mutant of E. coli is polar and DnaJ is expressed
constitutively at a lower level from a similar internal promoter. For
the latter, it has been shown that the phenotype of the
dnaK
52 mutant can be complemented by a wild-type
dnaK gene provided by a lambda phage and is thus not due to
the reduced level of DnaJ (5). The same may well be true for
the dnaK mutant of B. subtilis. It would,
however, be important in light of the role of DnaK in L. lactis to observe the phenotype of a nonpolar dnaK
mutant of B. subtilis; in addition, it would be most
interesting to obtain results from nonpolar dnaK mutants of
other CIRCE-containing organisms.
| |
ACKNOWLEDGMENTS |
|---|
The outstanding technical assistance of Tim Evison and Kristina Brandborg Jensen is gratefully acknowledged. We gratefully acknowledge the gift of the antibody against DnaK from B. subtilis from W. Schumann as well as the dnaK plasmid, pFI573, from M. Gasson and the ftsH plasmid, pLN32, from D. Nilsson.
This work was financed by MFF (Danish Dairy Board Research Foundation) and by the FØTEK Program through the Center for Advanced Food Studies.
| |
FOOTNOTES |
|---|
* Corresponding author. Mailing address: Department of Microbiology, Technical University of Denmark, DK-2800 Lyngby, Denmark. Phone: 45 45 25 24 96. Fax: 45 45 88 26 60. E-mail: kh{at}im.dtu.dk.
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