Next Article 
J Bacteriol, February 1998, p. 449-456, Vol. 180, No. 3
0021-9193/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Molecular Mechanism of Peptide-Specific Pheromone
Signaling in Enterococcus faecalis: Functions of Pheromone
Receptor TraA and Pheromone-Binding Protein TraC Encoded by
Plasmid pPD1
Jiro
Nakayama,*
Yuuichiro
Takanami,
Takaaki
Horii,
Shohei
Sakuda, and
Akinori
Suzuki
Department of Applied Biological Chemistry,
Graduate School of Agriculture and Life Sciences, University of
Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113, Japan
Received 18 August 1997/Accepted 24 November 1997
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ABSTRACT |
Conjugative transfer of the Enterococcus faecalis
plasmid pPD1 is activated by cPD1, one of several peptide sex
pheromones secreted by plasmid-free recipient cells, and is blocked by
a donor-produced peptide inhibitor, iPD1. Using a tritiated pheromone, [3H]cPD1, we investigated how pPD1-harboring donor cells
receive these peptide signals. Donor cells rapidly incorporated
[3H]cPD1. The cell extract but not the membrane fraction
of the donor strain exhibited significant
[3H]cPD1-binding activity. On the basis of these data and
those of tracer studies, it was demonstrated that cPD1 was
internalized, where it bound to a high-molecular-weight compound.
The cell extract of a strain carrying the
traA-bearing multicopy plasmid (pDLHH21) also exhibited
high [3H]cPD1-binding activity.
A recombinant TraA exhibited a dissociation constant of 0.49 ± 0.08 nM against [3H]cPD1. iPD1 competitively
inhibited [3H]cPD1 binding to TraA, whereas pheromones
and inhibitors relating to other plasmid systems did not. These results
show that TraA is a specific intracellular receptor for cPD1 and that
iPD1 acts as an antagonist for TraA. A strain carrying the
traC-bearing multicopy plasmid (pDLES23) exhibited
significant [3H]cPD1-binding activity. A strain carrying
traC-disrupted pPD1 (pAM351CM) exhibited lower
[3H]cPD1-binding activity as well as lower sensitivity to
cPD1 than a wild-type donor strain. Some of the other pheromones
and inhibitors inhibited [3H]cPD1 binding to the
traC transformant like cPD1 and iPD1 did. These
results show that TraC, as an extracellular less-specific pheromone-binding protein, supports donor cells to receive cPD1.
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INTRODUCTION |
Enterococcus faecalis
produces a family of peptide signaling molecules designated as sex
pheromones (6, 8, 11). Each pheromone triggers the conjugal
transfer system of a particular plasmid such as the hemolysin plasmid
pAD1, the bacteriocin plasmid pPD1, or the tetracycline resistance
plasmid pCF10 (8, 9). Hosts carrying the plasmid shut off
the activity of that pheromone by two functions encoded on the plasmid
(29). One involves a reduction of the pheromone production,
the so-called pheromone shutdown (1, 29, 36). The other is
the production of a specific inhibitor competitive with the pheromone
(21, 25, 30, 31). When the plasmid-containing donor bacteria
are close to plasmid-free recipients and exposed to the pheromone
secreted from the recipient, the conjugal transfer system encoded on
the plasmid is activated, and a copy of the plasmid is transferred to
the recipient. Synthesis of the aggregation substance is an important
event in the pheromone-inducible conjugation system (13).
The aggregation substance expressed on the donor cell surface leads to
cell clumping between donor and recipient cells and facilitates the
high-frequency transfer of the plasmid in liquid cultures (7, 13,
35). Five pheromones and their inhibitors have been identified as
linear hepta- or octapeptides composed of protein amino acids
(21-25, 28, 30, 31, 40). The pheromone and inhibitor
corresponding to a certain plasmid, pX, are designated cX and iX,
respectively. Pheromones exhibit clumping-inducing activity for donor
strains at concentrations of approximately 0.1 to 0.01 nM. There is no
cross-activity among these pheromones in the clumping-inducing
bioassays. Moreover, the inhibitors specifically inhibited the mating
response to the corresponding plasmid. These results suggest that those
plasmids encode a system for peptide-specific pheromone signaling.
Bacteriocin plasmid pPD1 encodes a response to the octapeptide cPD1. A
region of pPD1 involved in both pheromone response and pheromone
shutdown has been sequenced, and tra genes have been
characterized, as shown in Fig. 1
(12, 34, 36, 44). The traA and traC
genes have been shown to contribute to pheromone sensing. The
traA gene encodes a 38-kDa cytoplasmic protein. A strain
carrying a disruption in traA constitutively clumped and transferred pPD1 without pheromone exposure. Thus, TraA is a negative regulator in the cPD1-inducible conjugation. The traC gene
encodes a 61-kDa protein, TraC, with a putative signal sequence. The
amino acid sequence of TraC is homologous to oligopeptide-binding
proteins of other bacterial species (36), which is a part of
a complex of an oligopeptide permease (Opp) (15, 18, 37,
38). A strain carrying a traC mutation (pAM351CM)
required a fourfold-higher concentration of cPD1 than that needed by
the wild-type strain for induction of sexual aggregation
(36). These results suggest that TraC may contribute to
pheromone sensitivity as a pheromone-binding protein.

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FIG. 1.
Genetic organization of enterococcal plasmids related to
this study. The arrows show the directions of transcription. The
function attributed to each gene is indicated in parentheses above the
gene. The genotype of each plasmid is shown in parentheses after the
plasmid name. pAM351 is a derivative of pPD1 with an insertion of a
tetracycline resistance transposon, Tn916. The insertion of
Tn916 is located in the EcoRI-B fragment (not
shown in this map); this insertion exhibited no effect on the phenotype
relating to pheromone-inducible cell clumping and plasmid transfer.
pDL276 is a multiple-copy E. coli-E. faecalis shuttle vector
(10). The discontinuous region between the two slanted lines
corresponds to a 2-kb segment (12). The vertical dashed
lines indicate the restriction enzyme sites used for cloning, deletion,
or site-directed mutagenesis. The crosses represent lesions of DNA
which cause frameshift nonsense mutations. The discontinuous region
between the two slanted lines represents a deleted region.
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In this report, we describe a biochemical study on how donor cells
receive the peptide-specific pheromone signal. Labeling of cPD1 has
been difficult because modification or amino acid substitution greatly
reduced its bioactivity. Thus, we designed and synthesized a
radiolabeled cPD1 having the same chemical structure as native cPD1
except for replacement of some protons with tritium. Using the
tritiated cPD1, we demonstrated that cPD1 permeates the cell wall with
or without the aid of the pheromone-binding protein TraC and is
internalized, where it binds to a specific receptor, TraA.
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MATERIALS AND METHODS |
Enterococcal plasmids, strains, and media.
The maps of the
enterococcal plasmids used in this study are shown in Fig. 1. All
enterococcal plasmids were expressed in strain OG1X (16)
with the exception that strain 39-5S
was used for the
clumping-inducing bioassay (40). All E. faecalis
strains were grown in Todd-Hewitt broth (Oxoid) at 37°C. pAM351 is a
derivative of pPD1 with an insertion of a tetracycline resistance
transposon, Tn916 (16). OG1X carrying pAM351 had
the same phenotype relating to pheromone-inducible cell clumping and
plasmid transfer as OG1X carrying pPD1. pAM351CM and pAM351AIM are
mutant derivatives of pPD1, generated by site-directed
mutagenesis. pAM351CM has a frameshift mutation proximal to the
translation start site of traC (36). pAM351AIM has a deletion for most of traA and all of
ipd (34). pDLES23 and pDLHH21 are chimeric
plasmids of E. faecalis-Escherichia coli shuttle vector
pDL276 (10) and a fragment containing traC or traA, respectively (34). pDLHH21 was
digested with EcoT22I, blunted with T4 DNA polymerase, and
then self-ligated. The resultant plasmid, designated pDLHH21X, had a
4-bp deletion at the EcoT22I site, generating a nonsense
mutation proximal to the translation start site of traA.
Peptides.
All cold peptides used in this study and a
precursor peptide for [3H]cPD1 were manually synthesized
by the solid-phase method by using the Fmoc
(9-fluorenylmethoxycarbonyl) strategy (Kokku-san peptide synthesis kit;
Kokusan Kagaku) and purified by high-pressure liquid chromatography
(HPLC) on a reverse-phase column (Pegasil octyldecylsilane [ODS];
Senshukagaku, Tokyo, Japan). The precursor, [4,5-dehydro-Leu2,6]cPD1 (1 mg), was dissolved in
methanol and reduced with tritium gas in the presence of palladium
black (10 mg) for 2 h (Tritium Labeling Service, Du Pont, Boston,
Mass.) (14). The tritiated product
([4,5-3H-Leu2,6]cPD1, abbreviated
[3H]cPD1), was purified by using a Pegasil ODS column (1 µg, 0.1% yield; 11.7 TBq/mmol).
Preparation of GST-TraA and rTraA.
The traA gene
was amplified by Taq DNA polymerase by using the pHPEV
plasmid (36) as a template and the following primers: 5'-GAGGATCCTGCATTTAAATGAATTAATG-3' and
5'-GAGAATTCGTTAATCTATTTTTTTGTGG-3'. These primers create
a BamHI site at the 5' end of the gene and an
EcoRI site at the 3' end of the gene. The BamHI
site was chosen to keep the traA gene in frame with the
glutathione S-transferase (GST) gene upon cloning into
pGEX-5X-1. The amplified fragment was cleaved to completion with
EcoRI and BamHI and ligated into the pGEX-5X-1
vector cleaved with the same restriction endonucleases. This construct,
called pGEX-traA, was transformed into E. coli JM109. The transformant was grown under appropriate antibiotic selection in 250 ml of Luria-Bertani broth to an optical density at 600 nm (OD600) of 1.6 at 26.5°C. The cells were induced to express GST-TraA by adding
isopropyl-
-D-thiogalactopyranoside (IPTG) to 0.1 mM and
grown for an additional 3 h at 26.5°C. All subsequent steps for
the preparation of recombinant TraA (rTraA) and GST-TraA were done as
described in the protocol of the Gene Fusion System (Pharmacia
Biotech). rTraA was generated by digestion of GST-TraA bound to
glutathione-Sepharose 4B (Pharmacia Biotech) with factor Xa (Danex
Biotek, Mundelstrup, Denmark).
Preparation of spheroplasts, cell extract, and membrane
fraction.
For the preparation of spheroplasts, the cell extract,
and the membrane fraction, bacteria were grown to mid-log phase
(OD660 = 0.5). For the preparation of spheroplasts, the
cells were harvested by centrifugation, resuspended at 1/10 the
original volume in STE (6.7% sucrose, 50 mM Tris-HCl, 1 mM EDTA [pH
8.0]) containing 1 mg of lysozyme per ml, and incubated for 30 min at
37°C. The spheroplasts obtained were washed once with STE and
resuspended at 1/10 the original cultured volume in STE for the binding
assay. The cell extract and the membrane were obtained by lysis of the protoplasts. For the preparation of protoplasts, the cells were harvested, resuspended at 1/100 of the original volume in STES (25%
sucrose, 1 mM EDTA, 10 mM Tris-HCl, 0.1 N NaCl [pH 8.0]) containing
0.1 mg of lysozyme per ml, 0.25 mg of mutanolysin per ml, and 1 mM
phenylmethylsulfonyl fluoride, and incubated for 30 min at 37°C. The
protoplasts obtained were osmotically lysed by adding 10 times the
volume of 1 mM MgCl2 containing 0.5 mg of DNase per ml.
Unlysed cells were removed by centrifugation with a swing rotor at
780 × g for 20 min. The cell extract, which exhibited
no significant dicyclohexylcarbodiimide-sensitive ATPase activity as a
membrane enzyme marker (41) but significant inorganic pyrophosphatase activity as a cytoplasmic enzyme marker
(17), was obtained by ultracentrifugation of the supernatant
at 125,000 × g for 2 h. The membrane fraction,
which exhibited an inorganic pyrophosphatase activity 1/100 that of the
cell extract but a significant dicyclohexylcarbodiimide-sensitive
ATPase activity, was obtained by washing the pellet with 1 mM
MgCl2. The membrane fraction was resuspended at 1/10 the
original culture volume in STE.
[3H]cPD1 binding assay.
For binding with
intact cells, E. faecalis strains, except OG1X carrying
pDLES23 or pDL276, were grown to mid-log phase
(OD660 = 0.5), harvested by centrifugation, and
resuspended at 1/10 the original volume in fresh medium. Strain OG1X
carrying pDLES23 or pDL276 was grown to late log phase
(OD660 = 1.0), harvested, and resuspended at 1/100 the
original volume in fresh medium. After incubation with
[3H]cPD1 at 37°C, the cells were harvested by
centrifugation at 10,000 × g for 1 min and washed with
an equal volume of fresh medium, and the radioactivity of the cells was
measured. Except for the time course experiment, the incubation time
for experiments was 15 min. For binding to spheroplasts, the
spheroplasts were incubated with [3H]cPD1 for 30 min at
4°C, harvested by centrifugation at 600 × g for 5 min, and washed with an equal volume of STE, and the spheroplast-bound radioactivity was measured. Binding to the cell extract was measured by
the equilibrium dialysis method (19) after incubation with 0.3 nM [3H]cPD1 at 4°C for 24 h. For binding to
the membrane, the membrane fraction was incubated with
[3H]cPD1 for 30 min at 4°C, harvested by
ultracentrifugation at 125,000 × g for 30 min, and
washed with an equal volume of STE, and the radioactivity of the
membrane was measured. Binding to rTraA was determined by use of the
equilibrium dialysis method (19) after incubation of 6.25 nM
rTraA with [3H]cPD1 at 20°C for 48 h.
During competitive inhibition analysis, binding was measured with the
intact cells of OG1X carrying pDLES23, the spheroplasts of OG1X
carrying pAM351, and GST-TraA. The spheroplasts of OG1X carrying pAM351
were prepared as described above. After incubation in STE containing
0.5 nM [3H]cPD1 and various concentrations of cold
peptide for 30 min at 4°C, the spheroplasts were harvested by
centrifugation and washed with an equal volume of STE, and the
spheroplast-bound radioactivity was measured. OG1X carrying pDLES23 was
cultured with 1 mM IPTG for 2 h from mid-log to late log phase.
These cells were harvested by centrifugation and resuspended at 1/100
the original volume in fresh medium. After incubation with 0.5 nM
[3H]cPD1 and various concentrations of cold peptide at
4°C for 30 min, the cells were harvested by centrifugation at
10,000 × g for 1 min and washed with an equal volume
of fresh medium, and the radioactivity of the intact cells was
measured. For binding to GST-TraA, 20 nM GST-TraA and 25 µl of a 75%
slurry of glutathione-Sepharose 4B were added to 0.5 ml of STE
containing 0.2 nM [3H]cPD1 and various concentrations of
cold peptide. After incubation for 90 min at 4°C, the resin was
collected by centrifugation and washed with an equal volume of STE, and
the radioactivity of the resin was measured.
Gel filtration column chromatography.
Gel filtration column
chromatography was done with a gel filtration HPLC column (Shodex
KW-802.5, 6 mm [internal diameter] by 300 mm; Showadenko)
equilibrated with 0.1 M potassium phosphate buffer (pH 7.0) containing
0.2 M NaCl. The elution was performed with the same buffer at a flow
rate of 1 ml/min.
Tracer experiments of incorporated [3H]cPD1.
For the reverse-phase HPLC analysis, spheroplasts from 5 ml of culture
of OG1X carrying pAM351 were incubated with 1.0 nM [3H]cPD1 at 37°C for 90 min. The spheroplasts were
harvested by centrifugation, washed with STE, lysed with 100 µl of
dimethyl sulfoxide, and then centrifuged at 15,000 × g. The supernatant was subjected to reverse-phase HPLC with
the Pegasil ODS column and eluted with a linear gradient of 20 to 50%
acetonitrile in 0.1% trifluoroacetic acid at a flow rate of 1.0 ml/min. For the gel filtration HPLC analysis, intact cells from 5 ml of
culture of OG1X carrying pAM351 were incubated with 0.3 nM
[3H]cPD1 at 37°C for 15 min. The cell extract was
prepared by osmotic lysis after cell wall digestion as described above,
and the lysate was applied to gel filtration HPLC analysis.
Tritium counting.
The tritium count was measured in
scintillation vials containing 5 ml of aqueous counting scintillant
(ACSII; Amersham) with a
-scintillation counter.
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RESULTS |
Synthesis of tritiated cPD1.
A tritiated cPD1,
[3H]cPD1, was obtained by catalytic reduction of a
precursor peptide, [4,5-dehydro-Leu2,6]cPD1, in the
presence of tritium gas. [3H]cPD1 was isolated by
reverse-phase HPLC. [3H]cPD1 was chromatographically
identical to nonradioactive cPD1 and showed clumping-inducing activity
at concentrations higher than 0.1 nM, which was comparable to that of
the nonradioactive peptide. [3H]cPD1 had sufficiently
high specific radioactivity (11.7 TBq/mmol) for the following binding
experiments.
Time course of [3H]cPD1 binding to intact cells.
[3H]cPD1 was incubated with intact cells of E. faecalis, and the radioactivity associated with the cells was
measured at various times (Fig. 2). The
radioactivity of the donor cells increased immediately after the
addition of [3H]cPD1 and reached a maximum within 30 min.
This is not inconsistent with sexual aggregation starting at 30 to 45 min after pheromone exposure. On the other hand, no increase was
detected in the case of the plasmid-free strain. These results implied
that the donor cell specifically bound cPD1. After 45 min, the
radioactivity associated with the donor cells gradually decreased.

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FIG. 2.
Time course of [3H]cPD1 binding.
[3H]cPD1 binding to intact cells of the recipient strain
OG1X and the donor strain OG1X carrying pAM351 is shown. Intact cells
prepared from the bacteria growing at mid-log phase (OD660 = 0.5) were resuspended at 1/10 of the original volume in fresh medium
and incubated with 0.6 nM [3H]cPD1 at 37°C, and the
radioactivity of the cells was then measured. The data represent
average values from two incubations.
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[3H]cPD1 binding to each fraction of donor
cells.
To survey the binding site for cPD1 on the donor cells, we
examined the [3H]cPD1-binding activity to the intact
cells, the spheroplasts, the cell extract, and the membrane fraction
(Fig. 3). Spheroplasts, that is,
lysozyme-treated cells, showed high [3H]cPD1-binding
activity compared to that of intact cells. This implied that the cell
wall is an obstacle to cPD1 approaching the cell membrane. The binding
activity of the cell extract was determined in an assay using the
equilibrium dialysis method with a membrane having a molecular size
cutoff of 12,000 to 14,000 Da. The cell extract showed a binding
activity as high as that of the spheroplasts. On the other hand, the
membrane fraction showed no detectable specific
[3H]cPD1-binding. On the basis of all these data, it was
suggested that cPD1 is internalized into the cell and is then bound to
a high-molecular-weight compound(s) existing in the cytosol.

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FIG. 3.
[3H]cPD1 binding to intact cells,
spheroplasts, cell extract, and membrane fraction of donor strain.
Each sample was prepared from OG1X carrying pAM351 growing at mid-log
phase (OD660 = 0.5) and incubated with 0.3 nM
[3H]cPD1. Specific binding was calculated by subtracting
the nonspecific binding determined in the presence of a 1,000-fold
molar excess of cold cPD1 from the observed total binding. The data
represent average values from two incubations. N.D., not detected
(i.e., the nonspecific binding was higher than the total binding).
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Tracer study of the internalized [3H]cPD1.
To
investigate the fate of the internalized cPD1, we performed two kinds
of tracer studies. One was to investigate proteolytic degradation of
the internalized [3H]cPD1 (Fig.
4A). The donor spheroplasts were
incubated with [3H]cPD1 and lysed with dimethyl
sulfoxide, and the lysate was analyzed by reverse-phase HPLC. Dimethyl
sulfoxide was used to rapidly lyse the spheroplasts. Eighty-eight
percent of the incorporated radioactivity was recovered in a
radioactive peak with the same retention time as that of cPD1. This
result implied that the internalized cPD1 existed mostly in the intact
form. This result did not negate our understanding that the
internalized cPD1 was bound to a high-molecular-weight compound,
because dimethyl sulfoxide and acetonitrile could dissociate cPD1 from
the binding molecule. The other tracer study was to confirm the
understanding that the internalized [3H]cPD1 was bound to
a high-molecular-weight compound existing in the cytosol (Fig. 4B). The
intact donor cells were incubated with [3H]cPD1, treated
with lysozyme and mutanolysin, and osmotically lysed. Then, the cell
extract was analyzed by gel filtration HPLC analysis. As expected, a
radioactive peak was detected in the high-molecular-weight fractions.

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FIG. 4.
Tracer studies of incorporated [3H]cPD1.
(A) The spheroplasts from 5 ml of culture of OG1X carrying pAM351 were
incubated with 1.0 nM [3H]cPD1 at 37°C for 90 min and
then lysed with dimethyl sulfoxide. Ninety-seven percent of the
incorporated radioactivity was recovered in the lysed fraction. The
lysate was subjected to reverse-phase HPLC and eluted with a linear
gradient of 20 to 50% (30 min) acetonitrile in 0.1% trifluoroacetic
acid at a flow rate of 1.0 ml/min. The radioactive peak at 24 min
comprises 88% of the incorporated radioactivity. The arrow indicates
the retention time of cPD1. The dotted line indicates the concentration
of acetonitrile. (B) The intact cells from 5 ml of culture of OG1X
carrying pAM351 were incubated with 0.3 nM [3H]cPD1 at
37°C for 15 min, treated with lysozyme and mutanolysin, and then
osmotically lysed. The cell extract was subjected to gel filtration
HPLC. Fractions were collected at 30-s intervals. Tritium counts were
measured in each fraction.
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Scatchard analysis of [3H]cPD1 binding to donor
spheroplasts.
To characterize the nature of the binding molecule,
Scatchard analysis of [3H]cPD1 binding was performed with
the spheroplasts of the donor cells. The binding of
[3H]cPD1 to the donor spheroplasts was saturable, as
shown in Fig. 5A. Scatchard analysis of
the binding data revealed one class of high-affinity binding sites
(approximately 100 sites per cell), with a dissociation constant
(Kd) of 0.45 ± 0.03 nM (mean ± standard deviation) (Fig. 5B). The Kd value is
close to the minimum concentration (approximately 0.1 nM) required to
induce cell clumping of the donor cells, suggesting that the binding
molecule may function as a sensor for cPD1.

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FIG. 5.
Equilibrium saturation binding (A) and Scatchard plot
(B) of [3H]cPD1 binding to donor spheroplasts. The
spheroplasts were prepared from OG1X carrying pAM351. The samples were
run in duplicate. Specific binding (closed circles) was calculated by
subtraction of the nonspecific binding (line [calculated from
positions of closed triangles] determined for binding in the presence
of a 1,000-fold molar excess of cold cPD1) from total binding (open
circles).
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[3H]cPD1 binding to tra mutants and
tra transformants.
To investigate how the functions of
TraA and TraC relate to cPD1 binding, we examined
[3H]cPD1 binding to traA and traC
mutants and traA and traC transformants (Fig.
6). Neither the intact cells nor
spheroplasts of the strain carrying traA-disrupted pPD1
(pAM351AIM) showed significant binding activity. On the other
hand, both the intact cells and spheroplasts of the strain carrying the
traA-bearing multicopy plasmid (pDLHH21) exhibited
very high binding activities. A frameshift mutation on the 5' end of
traA resulted in loss of the [3H]cPD1-binding
activity, as shown in the strain carrying pDLHH21X. These observations
implied that TraA was the binding molecule for cPD1 in the cytosol.
This finding was confirmed by gel filtration analysis of the cell
extract (Fig. 7). The cell extract was
incubated with [3H]cPD1 and subjected to gel permeation
chromatography. A radioactive peak was found in the
large-molecular-size fractions as large as 40 kDa; traA
encodes a 38-kDa protein. The radioactive peak of the strain carrying
pDLHH21 was higher than that of the pAM351-carrying strain. The
difference would depend on the copy number of the plasmids.

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FIG. 6.
[3H]cPD1 binding to tra mutants
and tra transformants. (A) Intact cells and spheroplasts
prepared from plasmid-carrying OG1X cells growing at mid-log phase
(OD660 = 0.5) were resuspended at 1/10 the original volume
in THB medium and STE, respectively. (B) Intact cells prepared from
plasmid-carrying OG1X cells growing at late log phase
(OD660 = 1.0) were resuspended at 1/100 the original volume
of THB medium. The intact cells and spheroplasts were incubated with
0.3 nM [3H]cPD1. Specific binding was calculated by
subtraction of the nonspecific binding determined in the presence of a
1,000-fold molar excess of cold cPD1 from the observed total binding.
The data represent average values from two incubations. N.D., not
detected (i.e., the nonspecific binding was higher than the total
binding).
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FIG. 7.
Gel filtration analysis of cell extract incubated with
[3H]cPD1. Cell extracts prepared from 1-ml cultures of
strain OG1X (open circles), OG1X carrying pAM351 (closed circles), and
OG1X carrying pDLHH21 (closed triangles) were incubated with 0.3 nM
[3H]cPD1 at 4°C for 5 min and then subjected to gel
filtration HPLC. Fractions were collected at 30-s intervals. Tritium
counts were measured in each fraction.
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TraC is homologous to oligopeptide-binding proteins of other
bacterial species (36); therefore, it was likely that TraC has binding activity to cPD1. However, we could detect no
significant [3H]cPD1 binding to the strain
carrying pAM351AIM (TraA
TraC+).
Therefore, we examined [3H]cPD1 binding to the strain
carrying the traC-bearing multicopy plasmid (pDLES23).
To detect the low binding activity, the cells were suspended at
1/100 of the original volume (i.e., concentrated 10 times more than the
cells whose case is illustrated in Fig. 6A). As a result, the intact
cells of the strain carrying pDLES23 exhibited significant
[3H]cPD1-binding activity, while the intact cells of the
strain carrying the vector (pDL276) exhibited no specific binding (Fig. 6B). This result indicates that TraC has binding ability for cPD1. However, the binding ability was very low compared with that of TraA.
The intact cells of the strain carrying the traC-disrupted pPD1 (pAM351CM) (36) showed a [3H]cPD1-binding
activity lower than that of the wild-type donor cells. On the
other hand, the spheroplasts of the pAM351CM-carrying strain showed
a [3H]cPD1-binding activity as high as that of the
spheroplasts of wild-type donor cells, indicating that TraC did not
contribute to the pheromone binding in spheroplasts.
cPD1-binding activity of TraA.
To elucidate the cPD1-binding
activity of TraA, we prepared a recombinant protein, rTraA, and
performed a Scatchard analysis of the [3H]cPD1 binding to
rTraA (Fig. 8). GST-TraA, a fusion
protein of GST and TraA, was expressed in E. coli, purified
by glutathione-Sepharose affinity column chromatography, and digested
with a site-specific protease, factor Xa. The sequence of the resultant
protein, rTraA, should be the same as the deduced sequence of TraA
except for three N-terminal amino acids. rTraA exhibited specific
binding to [3H]cPD1. The binding of
[3H]cPD1 to rTraA was saturable. The
Kd value of 0.49 ± 0.08 nM is similar to
that of spheroplasts of the donor cells, indicating that TraA is the
binding molecule in the cytosol. The Kd value for maximum binding (0.37 nM) was much lower than the concentration of
rTraA (6.25 nM). This discrepancy may be due to the denaturation of
rTraA during the preparation or the incubation.

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|
FIG. 8.
Equilibrium saturation binding (A) and Scatchard plot
(B) of [3H]cPD1 binding to rTraA. Binding to rTraA was
determined by the equilibrium dialysis method (19) after
incubation of 6.25 nM rTraA with various concentrations of
[3H]cPD1 at 20°C for 48 h. The samples were run in
duplicate. Specific binding (closed circles) was calculated by
subtraction of the nonspecific binding (line determined for binding in
the presence of a 1,000-fold molar excess of cold cPD1) from total
binding (open circles).
|
|
Competitive-inhibition analysis of [3H]cPD1 binding
to TraA and TraC by cold peptides of cPD1, iPD1, and other pheromones
and inhibitors.
There is no significant cross-activity among the
five pheromones and their inhibitors thus far identified. To
investigate the relationship between the peptide-specific pheromone
signaling and the binding functions of TraA and TraC, we examined which of these pheromones and inhibitors could bind to TraA or TraC. The
binding ability was examined by competitive-inhibition analysis of
[3H]cPD1 binding with cold peptides (Table
1).
The binding to TraC was detected on the strain carrying pDLES23 (Fig.
6B). The competitive inhibition of [3H]cPD1 binding to
TraC was examined by measuring the radioactivity of the TraC-expressing
cells after incubation with [3H]cPD1 and the cold
peptide. iPD1 competitively inhibited the binding of
[3H]cPD1 to TraC. The binding to TraC was also inhibited
by cCF10, iCF10, and iOB1 at a concentration as low as that of cPD1,
indicating that the binding function of TraC is not completely specific
to cPD1 and iPD1.
Competitive inhibition of [3H]cPD1 binding to TraA was
examined by the following two methods. One was to measure the
radioactivity of the donor spheroplasts after incubation with
[3H]cPD1 and cold peptide. As shown in Fig. 6A, the
spheroplasts of the traA mutant strain (pAM351AIM) showed no
[3H]cPD1-binding activity, indicating that the binding of
[3H]cPD1 to the donor spheroplasts represents binding to
TraA. The other was to measure the radioactivity bound to GST-TraA
after incubation with [3H]cPD1 and the cold peptide.
GST-TraA exhibited a dissociation constant against cPD1
(Kd = 1.03 ± 0.48 nM, data not shown)
similar to that of rTraA, indicating that GST-TraA was useful for
investigating the binding property of TraA. iPD1 inhibited
[3H]cPD1 binding to both the donor spheroplasts and
GST-TraA at a concentration as low as that of cold cPD1. These results
indicate that iPD1 is internalized into the cell and blocks the cPD1
signal as an antagonist for TraA. Pheromones and inhibitors relating to
other plasmids did not inhibit [3H]cPD1 binding to both
the donor spheroplasts and GST-TraA at concentrations lower than 1 µM. This result implies that the binding function of TraA is
completely specific to the related pheromone and inhibitor, cPD1 and
iPD1.
 |
DISCUSSION |
In this study, we have investigated how a plasmid-harboring cell
senses a pheromone signal by using the synthetic pheromone [3H]cPD1. The recipient bacteria produce 0.5 to 2.5 nM
cPD1 in the culture broth (29, 40), and the minimum
concentration required for the induction of mating aggregate is about
0.1 nM. The synthetic pheromone [3H]cPD1 had a
sufficiently high specific radioactivity for [3H]cPD1
binding to the donor cells to be detected under these physiological concentrations. [3H]cPD1 binding to the donor cells was
observed immediately after exposure to [3H]cPD1 (Fig. 2).
[3H]cPD1-binding activity was detected in the cell
extract from the donor strain (Fig. 3), suggesting the internalization
of cPD1 and the existence of cytoplasmic binding molecules. The tracer study using reverse-phase HPLC (Fig. 4A) revealed that the internalized cPD1 existed mostly in the intact form. The tracer study using gel
filtration chromatography (Fig. 4B) confirmed the finding that the
internalized cPD1 was bound to a high-molecular-weight compound
existing in the cytosol; this was subsequently identified as
intracellular receptor TraA.
[3H]cPD1 binding to intact donor cells was lower than
that to spheroplasts (Fig. 3), suggesting that the cell wall is an
obstacle to cPD1 approaching the cell membrane. The mutation of
traC further reduced the binding to intact cells,
whereas it did not affect the binding ability of the spheroplasts
(Fig. 6A, pAM351CM). It seems that TraC supports cPD1 permeation of the
cell wall and helps donor cells sense the pheromone signal at the low
concentration existing in nature. The binding experiment with the
traC transformant provided direct evidence that TraC acts as
the pheromone-binding protein (Fig. 6B). However, its affinity was very
low compared with that of TraA. On the basis of all these data, it was
suggested that TraC may act as a transporter or a carrier protein and
may allow cPD1 to cross the cell wall. The precise function of TraC requires further investigation at the protein level, such as the localization or higher-order structure of TraC. It is noteworthy that
[3H]cPD1 binding to intact cells or spheroplasts was
observed only if the traA gene was transformed to the
plasmid-free strain (Fig. 6A, pDLHH21). This indicates that cPD1 uptake
requires no pPD1-encoded element other than TraA. Moreover, the
disruption of traC abolished neither the
[3H]cPD1-binding ability nor the pheromone response:
the strain carrying pAM351CM exhibited one-third of the
[3H]cPD1 binding found in the wild-type strain (Fig. 6A)
and to respond to cPD1 required a concentration of it fourfold higher than that needed by the wild-type strain (36). A protein
encoded by a chromosomal element, e.g., OppA (the lower-affinity
peptide-binding protein described by Leonard et al.
[20]), might act as another pheromone-binding protein.
The binding function of TraC was not completely specific to cPD1 and
iPD1. The cold peptides of cCF10, iCF10, and iOB1, as well as those of
cPD1 and iPD1, inhibited [3H]cPD1 binding to the
TraC-expressing cell (Table 1). The pheromone-binding protein encoded
by pCF10 (PrgZ) is highly homologous to TraC, with 86.6% identical
amino acids (12, 36, 39). Especially, the N-terminal half
(residues 1 to 300 of 545 amino acids) is extensively homologous, with
96.7% identical amino acids (95.4% identical nucleotides in the gene
that encodes it). It seems that pPD1 is evolutionarily close to pCF10
in this region and that the pPD1-encoded TraC could bind both cCF10 and
iCF10, which should be recognized by PrgZ. It is strange that there is
less similarity among the structures of cPD1, iPD1, cCF10, and iCF10.
On the other hand, iOB1 is similar to both cPD1 and iPD1; three
leucines of iOB1 are common in iPD1. TraC seems to misrecognize iOB1
because of this structural similarity. In our previous genetic study, the function of pPD1 traC could be complemented by pAD1
traC (42), suggesting that pAD1-encoded TraC
could bind cPD1 (34). However, cAD1 did not inhibit
[3H]cPD1 binding to pPD1-encoded TraC (Table 1),
indicating that cAD1 did not bind to pPD1-encoded TraC. On the
contrary, the function of pPD1 traC could not be
complemented by pCF10 prgZ (33), suggesting that
pCF10-encoded PrgZ could not bind cPD1, although cCF10 can bind
pPD1-encoded TraC.
The mechanism for membrane transport of a pheromone has been described
by Leonard et al., who reported that inactivation of the chromosomal
E. faecalis opp operon abolished the response at
physiological concentrations of cCF10 (20). They proposed a
model showing that cCF10 interacts with either PrgZ or OppA on the
donor cell and is then transported into the cell via the Opp complex,
which consists of two transmembrane proteins (OppB and OppC) and two
membrane-associated cytoplasmic ATPases (OppD and OppF). To investigate
whether cPD1 is imported via the Opp system, we prepared an
oppD-disrupted E. coli and examined the uptake of
[3H]cPD1. Unexpectedly, [3H]cPD1 was taken
up by the oppB-negative E. coli expressed with GST-TraA, as occurred in wild-type E. coli expressed with
GST-TraA (32). This suggests that cPD1 could permeate the
bacterial cell membrane in a manner independent of the Opp system. Like
TraC, the Opp system may help donor cells sense a pheromone at the low concentration existing in nature.
It has been reported that gene disruption of traA resulted
in constitutive clumping and plasmid transfer of the host cells, indicating that TraA functions as a negative regulator in pheromone signaling (34, 44). This study revealed that TraA is the
cytoplasmic cPD1-binding protein as well as the regulatory protein. The
Kd value of rTraA was close to the minimum
concentration needed to induce a mating response. On the basis of these
data together, TraA is concluded to function as the receptor for cPD1.
The Scatchard analysis with the donor spheroplasts (Fig. 5) showed
approximately a hundred binding sites per cell; provided that TraA
binds cPD1 at a ratio of 1:1, 100 molecules of TraA would exist in a
donor cell. The data also showed that fewer than 10 molecules of cPD1 were taken up into the cell and bound to TraA in the presence of the
minimum bioactive concentration (0.1 nM). iPD1 inhibited [3H]cPD1 binding to both GST-TraA and the donor
spheroplasts at a concentration as low as that of cPD1 (Table 1). This
coincides with the fact that iPD1 could inhibit the cPD1 activity at a
pheromone/inhibitor ratio of about 1:1 (25). It was
concluded that iPD1 is internalized into the cell and blocks the cPD1
signal as an antagonist for TraA (32). Pheromones and
inhibitors relating to other plasmid systems did not inhibit
[3H]cPD1 binding, indicating that the binding function of
TraA is completely specific to cPD1 and iPD1. This coincides with the fact that there is a low homology among pPD1-encoded TraA, pAD1-encoded TraA, and pCF10-encoded PrgX. In conclusion, TraA plays a central role
in the peptide-specific pheromone signaling as the specific receptor
for cPD1.
We have found that TraA interacted with a DNA fragment including a
promoter region of ipd, suggesting that TraA might function as a DNA-binding protein (27). A deletion of the promoter
region resulted in the loss of the ability for pheromone response,
suggesting that the induction for the aggregation substance gene
expression requires the ipd region (34). These
findings are coincident with a model of pAD1 where TraA functions as a
DNA-binding protein and negatively regulates transcription of
iad-traE1, which is involved in the positive regulation of
expression of the aggregation substance gene (5, 26, 43).
Recently, studies on pCF10 have shown that RNA molecules carried in the
inhibitor and its proximal regions are involved in the positive
regulation of the aggregation substance gene (2-4, 20).
Considering these findings, TraA may bind a promoter region of
ipd and repress expression of a transcript which might
positively regulate for synthesis of the aggregation substance. When
bound to cPD1, TraA may derepress the expression of the transcript,
which might result in synthesis of the aggregation substance. However,
considering that fewer than 10 molecules of cPD1 were internalized into
the cell at the physiological concentration, it is estimated that more
than 90% of TraA molecules were free-form. The cPD1 signal may be
amplified through the TraA molecules, e.g., by autophosphorylation of
TraA triggered by the cPD1 binding.
 |
ACKNOWLEDGMENTS |
We thank D. B. Clewell for the E. faecalis
strains and his helpful comments on the manuscript, G. M. Dunny
for the shuttle vector pDL276, and H. Kobayashi and F.-S. Che for their
technical advice.
This work was supported in part by a Grant-in-Aid for Scientific
Research (no. 09760112) from the Ministry of Education, Science, and
Culture of Japan, by a grant from the Nissan Science Foundation, by a
grant from the Naito Foundation, and by a grant from the Nougeikagaku
Shoureikai.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Applied Biological Chemistry, Graduate School of Agriculture and Life Sciences, University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113, Japan. Phone: 81-3-3812-2111, ext. 5133. Fax: 81-3-3812-0544. E-mail:
ajiro{at}hongo.ecc.u-tokyo.ac.jp.
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Copyright © 1998, American Society for Microbiology. All rights reserved.
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