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J Bacteriol, April 1998, p. 1895-1903, Vol. 180, No. 7
0021-9193/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
A Nine-Residue Synthetic Propeptide Enhances
Secretion Efficiency of Heterologous Proteins in
Lactococcus lactis
Y.
Le
Loir,1,*
A.
Gruss,1
S. D.
Ehrlich,2 and
P.
Langella1
Laboratoire de Génétique
Appliquée-URLEA,1 and
Laboratoire de
Génétique Microbienne,2 Institut
National de la Recherche Agronomique, Domaine de Vilvert, 78352 Jouy en
Josas Cedex, France
Received 1 December 1997/Accepted 29 January 1998
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ABSTRACT |
Lactococcus lactis, a gram-positive organism widely
used in the food industry, is a potential candidate for the secretion of biologically useful proteins. We examined the secretion efficiency and capacity of L. lactis by using the Staphylococcus
aureus nuclease (Nuc) as a heterologous model protein. When
expressed in L. lactis from an efficient lactococcal
promoter and its native signal peptide, only ~60% of total Nuc was
present in a secreted form at ~5 mg per liter. The remaining 40% was
found in a cell-associated precursor form. The secretion efficiency was
reduced further to ~30% by the deletion of 17 residues of the Nuc
native propeptide (resulting in NucT). We identified a modification
which improved secretion efficiency of both native Nuc and NucT. A
9-residue synthetic propeptide, LEISSTCDA, which adds two negative
charges at the +2 and +8 positions, was fused immediately after the
signal peptide cleavage site. In the case of Nuc, secretion efficiency
was increased to ~80% by LEISSTCDA insertion without altering the
signal peptide cleavage site, and the yield was increased two- to
fourfold (up to ~20 mg per liter). The improvement of NucT secretion
efficiency was even more marked and rose from 30 to 90%. Similarly,
the secretion efficiency of a third protein, the
-amylase of
Bacillus stearothermophilus, was also improved by
LEISSTCDA. These data indicate that the LEISSTCDA synthetic propeptide
improves secretion of different heterologous proteins in L. lactis.
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INTRODUCTION |
The information necessary for a
protein to direct its export from the cell cytoplasm across a membrane
has been extensively studied in both prokaryotes and eukaryotes
(26, 34, 41, 46). Export generally requires a particular
N-terminal sequence (called a signal peptide) which directs the
precursor to the secretion machinery and is cleaved during successful
export of the mature protein (58). While the signal peptide
is necessary for export, it is not sufficient, as not all proteins are
secreted even if they do bear this sequence (3, 6, 35, 60).
This suggests that information in the mature region of a secreted
protein is also important for export. Indeed, alterations in the
N-terminal end of the mature protein can drastically impair maturation
(18, 21, 50, 59). It was also shown that positive charges
block export when introduced directly after the signal peptide of
exported proteins, while alterations which maintain a neutral or
negative charge have little effect on maturation. In all these studies, the wild-type proteins were efficiently exported; only modifications which impair secretion were identified.
Some secreted bacterial proteins are translocated as preproproteins
(5, 44, 46). The propeptide, which is processed after
translocation, may improve translocation efficiency. Long propeptides
(60 to 200 residues), found in most bacterial exoproteases, are
autocatalytically cleaved and have an intramolecular chaperone activity
(5, 13, 61). Short propeptides (with fewer than 60 residues)
are found in different secreted enzymes from gram-positive bacteria,
including Bacillus subtilis
-amylase (51),
Bacillus cereus
-lactamase (Bla) (22), and
Staphylococcus aureus nuclease (Nuc) (7). These
propeptides are cleaved by unknown proteases, and their roles in
secretion, folding, or stability of the mature protein are uncertain
(39). Recent results show that the Nuc propeptide enhances
Nuc secretion efficiency in Escherichia coli; it was
proposed that the propeptide has Nuc-specific chaperone activity
(49).
Here we examine the secretion capacity of Lactococcus
lactis, a well-characterized lactic acid bacterium. Several
properties of L. lactis make it an attractive host for the
secretion of biologically useful proteins in fermentors or directly in
food: L. lactis is a food-grade organism and is extensively
used in dairy fermentations. Furthermore, a plasmidless strain of
L. lactis does not secrete proteases, nor almost anything
else, in quantity. A single secreted protein, Usp45, of unknown
function (53), can be systematically identified by sodium
dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), while
other secreted proteins are present in trace amounts. This feature
could simplify analyses of secreted proteins.
To date, numerous heterologous proteins have been secreted in L. lactis using host-specific or nonnative signal peptides
(29, 31, 40, 43, 46, 48, 54; for a review, see
reference 8). However, in most of these studies,
secretion efficiency (i.e., the proportion of total protein which is
present in mature secreted form) was not determined.
In this study, we use staphylococcal Nuc as a model protein to
determine whether secretion of heterologous proteins can be efficient
in L. lactis. Among the desirable features of Nuc are that
it is small, stable, and resistant to denaturation and that its
activity can be detected on petri plates as well as in PAGE zymograms.
The pre-Nuc reportedly contains an unusually long, 60-residue signal
peptide (15). Two active forms of secreted Nuc are detected;
the B form includes a 19-residue N-terminal propeptide (Fig.
1). In vivo, this propeptide is removed
by proteolytic cleavage, resulting in the A form (7). The
nuc gene has already been cloned (42), and Nuc is
secreted from numerous gram-positive bacteria, including L. lactis subsp. cremoris, L. lactis subsp. lactis, Streptococcus salivarius subsp.
thermophilus (17), B. subtilis
(15), Corynebacterium glutamicum (19),
and Lactobacillus sake (25). In addition, fusions
to the N-terminal end of the mature protein do not abolish enzymatic
activity (17, 24, 28, 32, 33, 37). In this study we examine
different parameters which affect the secretion efficiency of Nuc in
L. lactis. We have observed that the absence of the Nuc
propeptide results in a marked decrease of secretion efficiency.
However, this can be overcome by introducing a 9-residue synthetic
propeptide, LEISSTCDA, just after the signal peptide cleavage site.
LEISSTCDA also improved the secretion efficiencies of native Nuc and of
the
-amylase of B. stearothermophilus (AmyS)
(27). While most previous studies on secretion have
introduced modifications which impaired export, in this study we show
that N-terminal insertion of a specific synthetic peptide can improve
export.

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FIG. 1.
Signal peptidase and secondary cleavage sites used by
S. aureus, B. subtilis, L. lactis, and
C. glutamicum for processing of Nuc. Arrows represent main
processing sites, and dashed arrows represent minor processing sites as
described in references 7, 19, and
23. The N termini of NucB and NucA of S. aureus Foggie are indicated.
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MATERIALS AND METHODS |
Bacterial strains, plasmids, and media.
E. coli TG1
(11) and L. lactis MG1363 (10) were
used as hosts. Plasmids used are described in Fig.
2 and listed in Table 1. E. coli was grown on
Luria-Bertani (LB) medium (38) and incubated at 37°C.
L. lactis was grown on M17 medium (52) in which
lactose was replaced by 0.5% glucose (M17-Glu) or on brain heart
infusion (Difco) and incubated at 30°C. Chemically defined medium
(CDM) (36) was used to grow L. lactis for
pulse-chase experiments. The following antibiotics were added at the
indicated concentrations: erythromycin, 5 µg/ml for L. lactis or 150 µg/ml for E. coli; and ampicillin, 100 µg/ml for E. coli.

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FIG. 2.
Schematic structures of proteins encoded by the
indicated plasmids. For details of plasmid construction, see the text
and Table 1. The amino acid sequence of the region deleted from NucT is
shown in Fig. 4. Black arrowhead, promoter of the native nuc
gene (Pstaf) or lactococcal strong promoter
(P59); RBS, ribosome binding site of the
nuc gene; SP-Nuc, Nuc signal peptide coding region; gray
bar, Nuc propeptide coding region; black bar, sequence encoding the
LEISSTCDA synthetic propeptide; open bar, NucA or mature AmyS coding
sequence (not to scale).
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Nuc and AmyS plate activity assays.
Nuc plate assays were
performed as previously described (17). AmyS activity was
detected by growing cells on LB or M17-Glu agar plates containing 0.2%
starch and, after 48 h, covering the colonies with Lugol solution
(Sigma).
DNA manipulations.
Plasmid DNA was isolated essentially as
described previously (4) except that for L. lactis, TES buffer (25% sucrose, 1 mM EDTA, 50 mM Tris-HCl; pH 8)
containing lysozyme (10 mg/ml) was used for 10 min at 37°C to prepare
protoplasts. Enzymes were used as recommended by the suppliers. General
procedures for DNA manipulations were performed as described elsewhere
(38). Electroporation of L. lactis was performed
as described elsewhere (16), and transformants were plated
on M17-Glu agar plates containing the required antibiotic.
Amplification by PCR and oligonucleotide synthesis.
PCRs
were performed with a Perkin-Elmer Cetus (Norwalk, Conn.) apparatus
using Taq DNA polymerase (Promega) as recommended by the
manufacturer. Oligonucleotides were synthesized with a DNA synthesizer
(Applied Biosystems, San Jose, Calif.). A 762-bp fragment was PCR
amplified from the pBS:Pstafnuc matrix (17) (Table 1), which contains the nuc gene
devoid of the promoter. The oligonucleotides used were
5'-GGAATTCAAAAGAAAGAGGTGTTAGTTATG-3' (oligo 1) for the
coding strand and 5'-GGAATTCCGATCTAAAAATTATAAAAGT-3' (oligo
2) for the complementary strand. This DNA fragment was then cloned on
pBluescript (pBS) vector in E. coli TG1, resulting in
pBS:nuc.
The N-terminal-truncated form of Nuc (NucT) was obtained by PCR
amplification of a 560-bp fragment (nucT) from
pBS:nuc. The oligonucleotides used were
5'-TGGATGCATCACAAGCAACTTCAACTAAAAAA-3' (oligo 3)
(the underlined sequence corresponds to an inserted NsiI
site) for the coding strand and oligo 2 for the complementary strand.
An NsiI site was introduced at the 5' end of this fragment to allow fusions directly after the encoded Nuc signal peptide. The
PCR-amplified nucT fragment was cloned into
SmaI-cut pBS vector in E. coli TG1, resulting in
pBS:nucT.
The mature part of AmyS was obtained by PCR amplification of a 1,655-bp
fragment from pNZ10
5 (54). The oligonucleotides used were
5'-ATGCATCCGCACCGTTTAACGGC-3' (oligo 4) (an
NsiI site is underlined) for the coding strand and
5'-TACGTAGAAGTTGAAGCAAGCAA-3' (oligo 5) for the
complementary strand. The inserted NsiI site results in an
alteration of the neutral amino acid residue at position +1 from
alanine to serine. The PCR-amplified amyS fragment was then
cloned into SmaI-cut pBS vector in E. coli TG1,
resulting in pAmy1.
Plasmid constructions.
Plasmid constructions are summarized
in Fig. 2. Plasmids pNuc6, pNuc7, pNuc9, and pNuc10 were obtained
directly in L. lactis. To construct pNuc6, a
BamHI/SalI nuc fragment isolated from
pBS:nuc was inserted into
BamHI/SalI-cut pJDC9:P59,
downstream of the strong lactococcal promoter
P59. pJDC9:P59 nuc was
established in E. coli TG1. The P59
nuc cassette cut by KpnI/BspXI and treated
with mung bean nuclease was inserted into XbaI-filled-in
pVE3556, resulting in pNuc6.
pNuc7 was obtained by replacement of a SpeI/EcoRI
nuc fragment of pNuc6 by a SpeI/EcoRI
LEISSTCDAnuc fragment isolated from pBS:PstafLEISSTCDAnuc
(17) (this fragment is referred to as pBS:nucmcs)
that encodes the Nuc signal peptide followed by LEISSTCDA and NucB. In
pNuc6, an NsiI site separates the encoded signal peptide
from mature Nuc sequences. In pNuc7, the NsiI site is
present just after the encoded LEISSTCDA sequence. Whole-cell lysates
and Northern analysis of strains containing pNuc6 and pNuc7 showed that
plasmid copy numbers and the quantities of nuc-specific mRNA
were equivalent in these strains and thus allowed us to make a direct
comparison of Nuc production.
pNuc9 and pNuc10 were obtained by replacement of the
NsiI/SacI nuc fragment of pNuc6 or
pNuc7, respectively, by the NsiI/SacI nucT fragment purified from pBS:nucT.
Plasmids pAmy1, pAmy2, pAmy3, pAmy4, and pAmy5 were constructed in
E. coli; pAmy4 and pAmy5 were then introduced in L. lactis. pAmy2 and pAmy3 were obtained by replacement of the
NsiI/XbaI nuc fragment of
pBS:P59nuc or
pBS:P59LEISSTCDAnuc, respectively, by
the NsiI/XbaI amyS fragment of pAmy1.
Insertion of XbaI-cut pIL252 into XbaI-cut pAmy2
and pAmy3 resulted in pAmy4 and pAmy5, respectively. All constructions
were confirmed by sequencing using the dideoxynucleotide chain
termination method.
Protein analysis, immunoblotting, and zymograms.
SDS-PAGE,
electroblotting onto polyvinylidene difluoride membranes (Millipore),
and immunoblotting were performed as described previously
(38) or according to manufacturer recommendations. Antibodies against Nuc, Usp45 and AmyS, raised in rabbits, were kindly
provided by J. R. Miller (anti-Nuc) and W. M. de Vos
(anti-Usp45 and anti-AmyS). Immunodetection was performed with protein
G-horseradish peroxidase conjugate (Bio-Rad) and an enhanced
chemiluminescence kit (Dupont-NEN) as recommended by the suppliers. To
compare Nuc distribution or to quantitate Nuc secretion, three to six
independent samples were prepared (see below). Samples to be compared
were prepared at the same time and loaded on the same gel. After
enhanced chemiluminescence detection, different nonsaturated film
exposures were scanned with a Scanjet II scanner (Hewlett-Packard)
using Deskscan II and ImageQuant programs to get average values. For quantitation, signals were compared to those of known amounts of a
commercial NucA control. B and A forms of Nuc were taken into account
in these estimations. Nuc enzyme activity was evaluated on zymograms of
SDS-PAGE, after removal of the SDS, as described previously
(19).
Preparation of cellular and supernatant fractions of L. lactis and N-terminal microsequencing.
For cell
fractionation, 2 ml of L. lactis cultures at a given optical
density at 600 nm (OD600) were harvested by a 5-min centrifugation at 4°C and 8,000 rpm (Sigma 1K15). The supernatant and
cells were processed separately. To compare the amounts of secreted and
cell-associated proteins, both cell and supernatant fractions were
concentrated. Sample concentration was calculated as follows. The
equivalent of 1 ml of 1 OD600 unit of culture (cell or
supernatant) was concentrated in a 100-µl final volume as described
below, and 10 µl was loaded for SDS-PAGE. Supernatants were filtered
on 0.2-µm-pore-size filters (low protein retention; Millisar NML
Sartorius, Göttingen, Germany) and trichloroacetic acid (TCA)
(15% final concentration) was added to the filtrate. The resulting
pellet was dissolved in 1/20 volume of 50 mM NaOH. Cell pellets were
washed once with 1 ml of ice-cold TES, resuspended in TES, and
precipitated with TCA (10% final concentration). Cell pellets were
then washed once with 1 ml of cold acetone, dried, and resuspended in
70 µl of TES containing lysozyme (1 mg/ml). After 30 min of
incubation at 37°C, cells were lysed with 30 µl of 20% SDS. Equal
volumes of 2× loading buffer were added to all samples. Bands on the
polyvinylidene difluoride membrane corresponding to NucA, NucB, and
LEISSTCDA-Nuc forms were cut and subjected to N-terminal
microsequencing performed on a gas-phase sequencer (model 477A/HPLC
120A; Perkin-Elmer).
Pulse-chase conditions.
An overnight culture of the
appropriate L. lactis strain grown on CDM was used at 2% to
inoculate 20 ml of CDM. The culture was incubated at 30°C to an
OD600 of 0.45, and 10 ml of this culture was centrifuged.
The cell pellet was washed in CDM without methionine, resuspended in
CDM without Met, and incubated at 30°C for 5 min. Cultures were pulse
labelled for 2 min (a 1-min pulse gave similar results) by the addition
of 8 µl of [35S]Met (10 mCi/ml) to 8 ml of Met-depleted
culture. A total of 700 µl of 5% Met (2,500-fold excess) was added
(chase), and 1-ml samples were taken at given intervals. Samples were
precipitated with TCA (20% final concentration) and washed with
ice-cold acetone. The pellet was resuspended in 120 µl of NET (150 mM
NaCl, 2 mM EDTA, 20 mM Tris; pH 7.8) plus 0.2% lysozyme and incubated
at 37°C for 30 min. The samples were treated with 1.2 µl of 10%
SDS for cell lysis, vortexed, and incubated at 95°C for 5 min.
Samples were diluted twofold by the addition of NET plus 2% Triton
X-100. Immunoprecipitation was performed as described previously
(23).
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RESULTS |
nuc gene expression and Nuc secretion efficiency in
L. lactis.
The nuc gene with natural expression
signals was previously cloned (17) on pIL253, a
high-copy-number plasmid (45), resulting in plasmid pNuc3
(Table 1 and Fig. 2). To determine secretion efficiency, cell
supernatants and lysates were analyzed by Western blot experiments
after SDS-PAGE, using polyclonal antiserum for Nuc detection: secretion
efficiency was about 70%, and the remaining 30% was present as a
cell-associated precursor (pre-Nuc) (Fig. 3A). This low secretion efficiency is in
contrast with that observed for the native protein Usp45 (over 95%
secreted) (data not shown) and could be due to the atypical structure
of the Nuc signal peptide. When dilutions of commercially purified Nuc
were used as a concentration standard, the yield of secreted Nuc was
determined to be about 0.5 mg per liter in overnight cultures. To raise
expression levels, plasmid pNuc6, in which the nuc promoter
was replaced by P59, a strong lactococcal
promoter (55), was constructed (Table 1 and Fig. 2).
Secreted Nuc levels were about 5 mg per liter of overnight culture, a
10-fold increase compared to expression from pNuc3 (Fig. 3A). In this
experiment, secretion efficiency was ~60%. The amount of secreted
Nuc was slightly greater in stationary-phase than in exponential-phase
cultures (Fig. 3B), as expected if Nuc accumulates during growth. Taken
together, these results show that Nuc is secreted in substantial
amounts but inefficiently from L. lactis. Since (i)
secretion efficiency of Nuc was not markedly affected by changing
promoter strength (Fig. 3A) and (ii) secretion of Usp45 was not
affected in any Nuc-secreting L. lactis strain (data not
shown), we think that high Nuc production by pNuc6 does not saturate
the secretion capacity of the strain but rather that the pre-Nuc is
poorly recognized by L. lactis secretion machinery.

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FIG. 3.
(A) Nuc distribution at low and high expression levels
in L. lactis. Proportions of secreted Nuc and accumulated
pre-Nuc (prec) were analyzed in overnight cultures in M17-Glu of MG1363
containing pNuc3 or pNuc6 (which produce low and high levels of Nuc,
respectively). Western blot experiments of TCA-treated samples are
shown. Ten microliters of cells, the equivalent of 0.1 OD600 unit of cells, or culture supernatants thereof was
deposited per well. Left panel, low Nuc expression (from pNuc3); center
panel, high Nuc expression (from pNuc6); right panel, commercially
purified NucA (5 µg/ml; Sigma). (B) Nuc distribution as a function of
growth phase. Culture samples of strain MG1363 containing plasmid pNuc6
grown in M17-Glu were taken in exponential phase (EXP)
(OD600 = 0.6), early stationary phase (STAT)
(OD600 = 2.3), and after overnight growth (ON)
(OD600 = 1.9). Western blot experiments were performed on
cell lysates and filtered supernatants of each sample, after treatment
with 10 and 15% TCA, respectively. Migration positions of precursor
(prec) or mature forms of both NucA and NucB (abbreviated as A and B,
respectively) are indicated by arrows. C, cell lysates; S, supernatant
fractions.
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Pre-Nuc is enzymatically inactive.
The strain producing high
levels of Nuc (from pNuc6) and a nonproducing strain (containing
cloning vector only) have similar growth characteristics, indicating
that intracellular accumulation of pre-Nuc is not toxic. This
observation suggests that pre-Nuc is inactive in the cytoplasm. Note
that mature Nuc is devoid of cysteines and thus should not be affected
by intracellular reducing conditions. Pre-Nuc inactivity could be due
either to nonoptimal intracellular conditions for enzyme activity, to
aggregation, or to the antifolding activity of the Nuc signal peptide
(20, 33). SDS-PAGE of cell lysate and supernatant extracts
of the L. lactis strain containing pNuc6 was analyzed by
zymogram. Both NucA (detected in both cell lysate and supernatant) and
NucB (in supernatant) were enzymatically active. Despite the
accumulation of ample amounts of pre-Nuc as shown by Western blot
experiments, no enzymatic activity was detected at the expected
migration position of pre-Nuc on the zymogram. Subsequent analyses of
Nuc distribution were therefore performed by immunological assays
rather than activity tests. This result indicates that inactivity of
the pre-Nuc form is due at least in part to the antifolding activity of
the signal peptide.
N-terminal microsequencing of secreted Nuc forms.
Nuc has two
mature active forms, B and A (7). The A form results from
proteolytic cleavage of B (predominantly at position +19) in S. aureus (7). The predominant mature form in L. lactis, unlike S. aureus, is NucB (Fig. 1). Inefficient
cleavage to the NucA form may be due to a scarcity of L. lactis proteases. Both NucB and NucA appear to be stable, as no
degradation products were detected by Western blot experiments.
N-terminal microsequencing of the secreted forms B and A was
performed to determine the cleavage sites of pre-Nuc in L. lactis (Fig. 1). Signal peptide cleavage is conserved and occurred
just after the ANA motif, as predicted from von Heijne rules
(56). The A form, however, initiated 2 amino acids
downstream (+21) of the N-terminal end reported for S. aureus and is identical to the cleavage site found in B. subtilis (23). Cleavage to the NucA form thus appears
to involve host proteases. These results show that processing of
pre-Nuc in L. lactis is accurate and can result in the
export of significant amounts of Nuc which remain stable.
Deletion of 17 residues of the Nuc propeptide results in impaired
secretion efficiency in L. lactis.
In L. lactis,
the 21-residue Nuc propeptide interferes with neither activity nor cell
localization since both B and A forms are active and located in the
supernatant. As in C. glutamicum, only trace amounts of NucA
are found to be cell associated (Fig. 4)
(19). To test the involvement of the Nuc propeptide in the secretion process, we fused the Nuc signal peptide to NucT, an N-terminal truncation of Nuc. In NucT, residues +3 through +19 of the
21-residue propeptide are deleted (Fig. 4A). The first 10 amino acid
residues of this mature protein, SQATSTKKLH, have a net charge of +3
(Table 2). As would be expected for a
protein with a positively charged mature N-terminal end
(57), the secretion efficiency of NucT was very low (30%)
(Fig. 4B).

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FIG. 4.
Deletion of 17 amino acid residues of the Nuc propeptide
results in impaired secretion efficiency of Nuc in L. lactis. (A) The three last amino acid residues of Nuc signal
peptide and the N termini of native NucB and NucT are given. The amino
acids deleted in NucT are underlined. Signal peptide cleavage sites
(resulting in NucB and NucT) and secondary processing site found in
L. lactis (resulting in NucA) are indicated by arrows. (B)
MG1363 containing either pNuc6 (encoding Nuc) or pNuc9 (encoding NucT)
were grown overnight. Western blot experiments were performed on cell
lysates and filtered supernatants of each sample, after treatment with
10 and 15% TCA, respectively. Migration positions of the precursor
(prec) or mature (B, A, and T) forms of Nuc are indicated by arrows. C,
cell lysates; S, supernatant fractions.
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Nuc and NucT secretion efficiency is improved by insertion of a
synthetic propeptide (LEISSTCDA) at the N terminus of the mature
sequence.
Studies of E. coli indicate that the presence
of positively charged amino acids just after the signal peptide
cleavage site can result in precursor accumulation (18). We
considered Nuc and NucT to be good models to test the converse, i.e.,
whether the introduction of negative charges at the N terminus of the mature moiety could improve secretion efficiency. For this experiment, we used an oligonucleotide linker which was originally designed to
introduce restriction sites for cloning immediately downstream of the
sequence encoding the Nuc signal peptide (17) (Table 2 and
Fig. 2). The oligonucleotide was designed to avoid codons for
positively charged amino acids (17). The synthetic
propeptide, LEISSTCDA, adds two negative charges at positions +2
(commonly found in the mature moiety of secreted proteins
[57]) and +8. The LEISSTCDA-Nuc fusion is
enzymatically active, as judged from PAGE zymograms of culture
supernatants (data not shown). The secretion efficiencies of Nuc and
LEISSTCDA-Nuc (encoded by pNuc6 and pNuc7, respectively) and those of
NucT and LEISSTCDA-NucT (encoded by pNuc9 and pNuc10,
respectively) were examined (Fig.
5A and B).

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FIG. 5.
(A) Nuc distribution is altered by insertion of the
LEISSTCDA peptide between the signal peptide and mature Nuc. MG1363
containing either pNuc6 (encoding Nuc) or pNuc7 (encoding
LEISSTCDA-Nuc) was grown overnight. Western blotting was performed on
cell lysates (C) and filtered supernatants (S) of each sample, after
treatment with 10 and 15% TCA, respectively. Migration positions of
precursor (prec) or mature forms of both NucA and NucB (abbreviated A
and B, respectively) and LEISSTCDA-Nuc (LEISSTCDA-B) are indicated by
arrows. (B) NucT secretion efficiency is improved by insertion of the
LEISSTCDA peptide just after the Nuc signal peptide. MG1363 containing
either pNuc9 (encoding NucT), at left, or pNuc10 (encoding
LEISSTCDA-NucT), at right, were grown overnight. Western blotting was
performed on cell lysates and filtered supernatants of each culture
after treatment with 10 and 15% TCA, respectively. Prec, precursor; T,
NucT; LEISSTCDA-T, LEISSTCDA-NucT; C, cell lysates; S, supernatant
fractions. (C) Quantitation of Nuc. Supernatants of overnight cultures
of MG1363 containing either pNuc6 (encoding Nuc) (center panel) or
pNuc7 (encoding LEISSTCDA-Nuc) (right panel) were examined by Western
blotting without any TCA precipitation. Amounts of secreted Nuc were
determined by scanning blots and comparing signals with those of known
amounts of commercially supplied NucA (left panel). Ten microliters was
loaded per well. Values given above the lanes indicate NucA
concentrations per milliliter. LEISSTCDA-B, LEISSTCDA-Nuc; B, NucB; A,
NucA.
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Secretion efficiency of LEISSTCDA-Nuc was reproducibly improved
compared to that observed for Nuc (~80% for LEISSTCDA-Nuc compared
to ~60% for Nuc in supernatants). We also observed an increase of
mature LEISSTCDA-Nuc protein in the supernatant compared to Nuc,
resulting in yields of 10 to 20 mg per liter of culture (Fig. 5C).
Furthermore, N-terminal microsequencing of the LEISSTCDA-Nuc secreted
product shows that the signal peptide cleavage site is conserved in the
LEISSTCDA-Nuc fusion. An even greater effect of LEISSTCDA was observed
for NucT (Fig. 5B); secretion efficiency increased from about 30 to
90%. These results show that secretion efficiency is significantly
improved by the presence of LEISSTCDA just after the Nuc signal peptide
cleavage site, even if different sequences follow.
LEISSTCDA-Nuc precursor is more efficiently processed than pre-Nuc
in L. lactis.
Processing of the pre-Nuc and of the
pre-LEISSTCDA-Nuc was analyzed by pulse-chase labelling experiments
using [35S]Met (Fig. 6).
The effect of LEISSTCDA on secretion efficiency was found to be
comparable in CDM, medium used for pulse-chase labelling, with that
observed in rich medium (data not shown). Pulse-labelled pre-Nuc
expressed from pNuc6 was present for at least 1 min after the chase. In
contrast, no pre-LEISSTCDA-Nuc expressed from pNuc7 was detected, even
at time zero (just after the pulse). These results are consistent with
the conclusion that pre-LEISSTCDA-Nuc is processed more efficiently
than pre-Nuc in L. lactis, without altering the native
cleavage site.

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FIG. 6.
Comparison of kinetics of Nuc and LEISSTCDA-Nuc
maturation by pulse-chase experiments. MG1363 containing pNuc6
(encoding Nuc) (lanes on the left side) or pNuc7 (encoding
LEISSTCDA-Nuc) (lanes on the right side) was grown in CDM and
pulse-labelled with [35S]Met for 2 min. Samples were
taken at different times after the pulse as indicated (in minutes). The
time 0 min corresponds to a sample taken just at the end of the pulse.
Positions of migration of different Nuc species were determined by
parallel Western blotting performed on labelled samples. A faint
contaminating band is present in all lanes at the expected position for
LEISSTCDA-Nuc precursor (stippled arrow). As this band is equally
present in samples obtained from Nuc and LEISSTCDA-Nuc producers, we
suppose that it does not correspond to LEISSTCDA-Nuc precursor. A,
NucA; B, NucB; LEISSTCDA-B, LEISSTCDA-Nuc; prec, precursor.
|
|
Heterologous proteins have been reported to be targets of degradation
by proteases such as Lon or OmpT in E. coli (1,
12). In Western blot experiments, degradation products were not
observed. This suggests that both Nuc and LEISSTCDA-Nuc forms are
stable and not degraded by cytoplasmic or membrane proteases.
Furthermore, the increase in mature LEISSTCDA-Nuc protein compared to
mature Nuc protein is consistent with more efficient processing of the precursor, when LEISSTCDA is present.
Insertion of LEISSTCDA peptide improves secretion of AmyS in
L. lactis.
We asked whether LEISSTCDA could improve the
secretion efficiency of a protein not derived from Nuc. We chose the
-amylase of Bacillus stearothermophilus (AmyS)
(27), which has already been expressed in L. lactis (54). The mature region of AmyS was fused to the
Nuc signal peptide, followed or not by LEISSTCDA. The first 10 amino
acid residues of this mature region, SAPFNGTMMQ, have a neutral net
charge, and the insertion of LEISSTCDA adds two negative charges (Table
2). To compare the yields of secretion of AmyS and LEISSTCDA-AmyS, two
plasmids containing these fusions, pAmy4 (no LEISSTCDA) and pAmy5
(encoding the LEISSTCDA-AmyS fusion), were introduced in L. lactis. Activity tests on petri plates showed that significantly
more LEISSTCDA-AmyS than AmyS was secreted in L. lactis
(Fig. 7). Secretion efficiencies of AmyS
and LEISSTCDA-AmyS were also compared by Western blots of supernatants
and cell fractions of L. lactis strains containing pAmy4 and
pAmy5, respectively, with polyclonal antiserum used for AmyS detection
(not shown). Cell lysate fractions could not be precisely evaluated due
to a contaminating band which obscured the precursor, even after preincubation of AmyS antiserum. However, consistent with activity test
results, mature LEISSTCDA-AmyS was readily detected in
supernatants, whereas only trace amounts of mature AmyS were detected
in overexposed blots. These results indicate that LEISSTCDA-AmyS
precursor is more efficiently processed in L. lactis than
AmyS. The ensemble of these results indicates that the secretion
efficiencies of proteins fused to the Nuc signal peptide are improved
by the presence of the LEISSTCDA propeptide.

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|
FIG. 7.
Secretion of AmyS is improved by insertion of the
LEISSTCDA peptide just after the signal peptide. Cultures of MG1363
containing pIL252 (negative control) (streak 1), MG1363 containing
pAmy4 (Nuc signal peptide followed directly by AmyS) (streak 2), and
pAmy5 (Nuc signal peptide followed directly by LEISSTCDA-AmyS fusion)
(streak 3) were streaked on M17-Glu agar plates containing 0.2%
starch. AmyS secretion was visualized by a Lugol overlay.
|
|
 |
DISCUSSION |
Role of native Nuc propeptide for secretion of Nuc.
Numerous
secreted enzymes, including Nuc, are synthesized with an N-terminal
propeptide, which may be subsequently cleaved to generate the mature
protein (26, 46). In many cases (but not for Nuc) enzyme
activity requires processing of the propeptide to mature protein form.
There is evidence that propeptides may also improve secretion
efficiency. Recent studies using E. coli, comparing the
secretions of NucB and NucA fusions to an E. coli-derived signal peptide, indicate that the 19-residue Nuc propeptide improves secretion efficiency and confers SecA-independent secretion of Nuc
(49). Our results show that secretion of the N-terminal truncation of Nuc (NucT) fused to its own signal peptide is also poorly
efficient in L. lactis. The first 10 amino acid residues of
NucT have a net charge of +3 compared to a neutral net charge for Nuc
(Fig. 4 and Table 2). As recently proposed (49), the positive charge at the N-terminal region of NucA may inhibit its secretion efficiency by a possible interaction with the negatively charged heads of the membrane phospholipids. Other studies of E. coli confirm the importance of the mature moiety in secretion efficiency (2, 9, 18, 57, 58). Results with NucT, showing
poor secretion efficiency of a protein containing a positively charged
N terminus, extend these observations to L. lactis.
Alterations in the Nuc mature moiety improve secretion efficiency
of Nuc and recombinant proteins.
In our model system, about 60%
of native Nuc was secreted, while the rest was detected as
cell-associated precursor. This is in contrast to most previous
studies, in which the initial proteins were well processed, so any
enhancement of secretion efficiency would not have been detected. We
exploited pre-Nuc accumulation to show that the peptide LEISSTCDA
improved secretion efficiency to ~80% when inserted just after the
Nuc signal peptide. This improvement was accompanied by a two- to
fourfold increase in the amounts of Nuc-secreted product (up to 20 mg
per liter). Similar experiments in which several synthetic peptides
were inserted just after the signal peptide in a heterologous hybrid
protein in B. subtilis resulted in slightly enhanced
secretion; however, processing occurred at an altered cleavage site
(14). In contrast to the results of those previous studies,
LEISSTCDA-Nuc fusions conserve the original cleavage site. Improved
secretion efficiency by LEISSTCDA insertion was even more dramatic
for the protein devoid of its propeptide (NucT); in this case, the
level of secreted product rose from ~30 to ~90% of the total
protein. Improved secretion efficiency was also shown for AmyS. It thus
appears that the sequence information in the first 10 amino acid
residues of the mature moiety are critical for efficient secretion
driven by the Nuc signal peptide in L. lactis. These results
show that LEISSTCDA acts as efficiently as the native propeptide in
enhancing Nuc secretion. It will be of interest to determine whether,
like the Nuc propeptide in E. coli (49), the
presence of LEISSTCDA obviates the need for SecA in NucT
translocation.
How does LEISSTCDA insertion improve secretion?
LEISSTCDA
alters the N terminus of the mature protein by introducing two negative
charges at the +2 and +8 positions. Insertion of this peptide could
affect precursor conformation and thus facilitate its processing by
cytoplasmic secretory chaperones, or it might optimize the charge
balance around the signal cleavage site to facilitate translocation.
Both of these effects could be involved in improved secretion. The
presence of a negatively charged amino acid residue at position +2 is
particularly common in secreted proteins (57). Studies of
E. coli have led von Heijne to propose the positive-inside
rule, in which the charge at the N terminus of a precursor protein
should be superior to the charge surrounding the cleavage site
(including the N terminus of the mature protein) for efficient
translocation (57). Our results conform to this rule and may
further suggest that negative charges in the mature protein can enhance
export. We propose that peptides like LEISSTCDA could be of particular
interest for the secretion of recombinant proteins.
Secretion of heterologous proteins in L. lactis.
Several gram-positive organisms, including B. subtilis (for
reviews, see references 26 and
46), Streptococcus gordonii, Staphylococcus xylosus, Staphylococcus carnosus,
Listeria monocytogenes, C. glutamicum, and
Lactobacillus plantarum, have been successfully used either
for export of recombinant proteins or for antigen display on the cell
surface. We selected L. lactis as a potential secretion
host, rather than the above-mentioned organisms, because it has the
particularity of being one of the major species used in the food
industry, which ensures that it is nontoxic. L. lactis has
already been successfully tested as a vaccine vector (30). It is also the best characterized of the lactic acid bacteria and will
allow us to examine secretion at the genetic level. The parameters
identified in the present study that affect secretion efficiency will
be helpful in directing a choice of secretion vector. In these studies,
export efficiency in L. lactis was improved by altering the
N-terminal sequence of the mature protein to be exported. These results
should allow us to examine and potentially optimize secretion
efficiency of other fusion proteins in L. lactis.
 |
ACKNOWLEDGMENTS |
We are very grateful to Patricia Anglade for N-terminal
microsequencing analyses of Nuc, Sophie Sourice for DNA sequencing, and
Patrick Régent for photography. We thank James Miller and Willem
de Vos for their generous gifts of antisera against Nuc and against
AmyS and Usp45, respectively. We thank Paul Recsei for discussion of
his own Nuc results, Laurent Brétigny for his technical
contribution, and Jamila Anba and Cathy Schouler for their advice
during this work. We are very grateful to Emmanuelle Maguin,
Jean-Christophe Piard, and Isabelle Poquet for constant discussion
during the course of this work and to I. Poquet for providing her
unpublished data.
This work was financed in part by Biotech program BIOT-CT94-3055.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Laboratoire de
Génétique Appliquée-URLGA, Institut National de la
Recherche Agronomique, Domaine de Vilvert, 78352 Jouy en Josas
Cedex, France. Phone: 33 01 34 65 20 83. Fax: 33 01 34 65 20 65. E-mail: leloir{at}biotec.jouy.inra.fr.
 |
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