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Journal of Bacteriology, January 1999, p. 63-67, Vol. 181, No. 1
Department of Microbiology and Molecular
Genetics, University of Vermont, Burlington, Vermont 05405
Received 11 June 1998/Accepted 2 October 1998
PCR was used to amplify an internal region of the recA
gene from Streptococcus parasanguis FW213. The PCR fragment
was used as a probe to recover the entire streptococcal
recA gene from an S. parasanguis genomic
library, and the sequence of the gene was determined. The deduced
product of the S. parasanguis recA gene showed a high
degree of amino acid identity with other prokaryotic RecA proteins. The
cloned recA sequence was disrupted in vitro by insertional
mutagenesis, and the mutated allele was then introduced into the
S. parasanguis chromosome by homologous recombination. Results of Southern hybridizations confirmed the replacement of the
wild-type recA gene with the mutated allele. The
recA mutant strain was considerably more sensitive to UV
light than the parental strain, and this phenotype was consistent with
a mutation in recA. The S. parasanguis recA
mutant showed no reduction in its ability to adhere in the in vitro
tooth surface model, saliva-coated hydroxylapatite (SHA), or in its
ability to express the fimbria-associated adhesin Fap1. These results
demonstrate that in vitro attachment of S. parasanguis
FW213 to SHA and expression of Fap1 are recA independent.
The sanguis group of streptococci
are the primary colonizers of the tooth surface in humans and
constitute a major component of dental plaque (16), the
biofilm associated with caries (tooth decay) and periodontal disease.
In addition, when these oral streptococci gain access to the
bloodstream, they can successfully colonize the heart tissue, becoming
a major cause of subacute bacterial endocarditis (3).
Adherence of oral streptococci to host surfaces is a critical first
step in the colonization process, which is facilitated by multiple
adhesins expressed on the bacterial cell surface (17). These
adhesins are considered to be important factors in determining the
success of oral streptococcal colonization and survival within the
human host.
Results of studies on Streptococcus parasanguis FW213
indicate that attachment to the tooth surface is mediated by
peritrichous surface fimbriae (11, 14, 15). Fimbria-specific
polyclonal antiserum inhibits by more than 90% binding of S. parasanguis to an in vitro tooth surface model, i.e.,
saliva-coated hydroxylapatite (SHA) (11). Wild-type,
fimbriated S. parasanguis binds well to SHA, but afimbriated
mutants do not (15). The genes encoding two
fimbria-associated adhesions, FimA and Fap1, have been cloned and
characterized. The fimA gene encodes a 36-kDa lipoprotein that blocks the adherence of S. parasanguis to SHA (13,
22). FimA is an important virulence factor in S. parasanguis endocarditis and may promote adherence to fibrin in
cardiac vegetations (4). The fap1 gene encodes a
high-molecular-weight protein that is involved in adhesion to SHA and
appears to be important in the assembly of fimbriae (31).
The RecA protein of Escherichia coli plays a pivotal role in
both homologous recombination (5) and DNA repair
(29). RecA is required by some pathogenic bacteria for
expression of virulence factors, particularly if a recombination step
is involved in such expression. Some examples in which RecA is required
for expression of virulence traits include adherence and colonization
factors of Vibrio cholerae (19) and the different
pilus types in Neisseria gonorrhoeae (18).
A recombination-deficient strain of S. parasanguis would be
useful for further genetic studies with this organism, e.g., in complementation analyses. Such a mutant also would be useful to assess
the role of homologous recombination in the expression of S. parasanguis adherence factors. For example, the genetic locus
encoding the fimbria-associated adhesin Fap1 contains extensive repeat
regions (GenBank accession no. AF100426), and recombination may play a
role in the expression of Fap1.
Accumulating evidence indicates that the recA gene is
ubiquitous in prokaryotes and that analogous RecA proteins function similarly in different bacterial species (21, 23).
Interspecific complementation of an E. coli recA mutant has
been used to identify the recA genes of many gram-negative
bacteria, but this approach has not been successful with gram-positive
bacteria (8). The PCR has been used successfully to amplify
recA sequences from several gram-positive bacteria and
mycoplasms (7, 9). In the present study, a PCR-amplified DNA
fragment internal to the recA gene was used as a probe to
recover the entire recA gene from an S. parasanguis FW213 genomic library. Once identified, the cloned
recA gene was disrupted in vitro, and the mutated allele was
introduced into the chromosome to create an S. parasanguis recA mutant. The mutant was assessed for RecA function as well as
for its ability to adhere to SHA and to express the fimbria-associated adhesin Fap1.
Bacterial strains and plasmids.
The bacterial strains and
plasmids used in this study are listed in Table
1. S. parasanguis FW213
(formerly called Streptococcus sanguis) (6) is
the parent strain in which a recA mutation was constructed.
FW213 possesses peritrichous fimbriae and is adherent to SHA
(14). The insertionally inactivated recA strain, VT1354, was constructed in this study. Streptococcal strains were grown
statically in the presence of 5% CO2 at 37°C in
Todd-Hewitt broth (TH broth; Difco Laboratories, Detroit, Mich.).
Tetracycline (15 µg ml
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Construction and Analysis of a Streptococcus
parasanguis recA Mutant: Homologous Recombination Is Not Required
for Adhesion in an In Vitro Tooth Surface Model
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ABSTRACT
Top
Abstract
Introduction
Materials & Methods
Results & Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials & Methods
Results & Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials & Methods
Results & Discussion
References
1) and/or kanamycin (120 µg
ml
1) was added as required. E. coli JM109
(32) was used for plasmid propagation. E. coli
was grown on Luria-Bertani medium (24), and when required
for plasmid selection, ampicillin (100 µg ml
1),
tetracycline (15 µg ml
1), and/or kanamycin (25 µg
ml
1) was included. Agar was added to a final
concentration of 1.5% to prepare solid medium.
TABLE 1.
Bacterial strains and plasmids used in this study
DNA manipulations.
DNA manipulations and other molecular
biology techniques were carried out essentially as described previously
(24). DNA probes used in Southern or colony hybridization
analyses were radiolabeled with [
-32P]dCTP by nick
translation with a commercially available kit (Gibco BRL, Grand Island,
N.Y.). Procedures for filter hybridizations were performed as suggested
by the membrane manufacturer (Amersham Corp., Arlington Heights, Ill.)
and included high-stringency washes. The Puregene DNA isolation kit
(Gentra Systems, Inc., Minneapolis, Minn.) was used for the isolation
of S. parasanguis genomic DNA.
Oligonucleotides and PCR conditions. Conserved domains in gram-positive RecA proteins provided the basis for the synthesis of degenerate oligonucleotide primers to be used in a PCR. The DNA sequence of the coding strand primer, based on the conserved RecA protein domain 76-Glu-Ile-Tyr-Gly-Pro-Glu-Ser-Ser-Gly-84 (numbering corresponds to S. pneumoniae RecA sequence), is 5'-GAAATCTA(C,T)GG(A,T,G)CC(A,G)GA(A,G)TCTTCT-3'. The DNA sequence of the complementary strand primer, based on the conserved RecA protein domain 282-Gly-Glu-Gly-Ile-Ser-(Lys,Arg)-Thr-288, is 5'-GG(G,T)GAAGG(C,T,A)ATTTCTCGTAC-3'. DNA amplification was performed in a Perkin-Elmer 9600 thermocycler (Perkin-Elmer Cetus, Norwalk, Conn.) with the GeneAmp PCR reagent kit (Perkin-Elmer Cetus) according to the manufacturer's directions. Approximately 0.5 µg of S. parasanguis FW213 genomic DNA was used as a template. The PCR conditions were as follows: one cycle at 94°C for 3 min followed by 35 cycles of 1 min at 94°C, 1 min at 50°C, and 1 min at 72°C. The amplification reaction was completed with an additional cycle of 3 min at 72°C. The PCR amplification product was purified from a 2% (wt/vol) agarose gel with the QIAquick gel extraction kit (Qiagen, Inc.) as described by the supplier.
Electrotransformation of E. coli and S. parasanguis.
E. coli cells were prepared for electroporation
as previously described (2). Cells (50 µl) plus DNA were
electroporated in a 0.2-cm-gap-size cuvette in a Bio-Rad gene pulser
set at 2.5 kV, 25 µF, and 200
. Immediately following
electroporation, 360 µl of SOC medium (24) was added to
the cuvette. Cells were transferred to a 1.5-ml microcentrifuge tube
and incubated at 37°C for 1 h. Cells were then spread on
Luria-Bertani agar plates supplemented with appropriate antibiotics and
incubated overnight at 37°C.
UV light sensitivity test. Overnight cultures of S. parasanguis FW213 and VT1354 were diluted 1:50 in 10 ml of TH broth and incubated statically at 37°C in 5% CO2 to mid-logarithmic growth phase. Cells were diluted 1:50 in phosphate-buffered saline, and chains of the microorganism were disrupted by sonication (four times for 15 s each time) at 80 to 85 W in a Bronson sonifier with an ultrasonic cuphorn. Two-milliliter aliquots of cells were transferred to sterile 35-mm-diameter by 10-mm-depth petri dishes and irradiated under a germicidal lamp (15 W, model G15T8; General Electric) at a distance of 25 cm for various periods of time. During irradiation, cells were mixed gently with a stir bar. Immediately following irradiation, cells were spread at appropriate dilutions on TH agar plates and incubated at 37°C in 5% CO2. Nonirradiated cells served as a control. After 2 days of incubation, UV sensitivity was evaluated by colony counting.
Adhesion of S. parasanguis to SHA. Preparation of hydroxylapatite beads, clarification of saliva, preparation of SHA beads, and the adhesion assay used have been described previously (11). Data were obtained from two independent one-point adhesion assays (15) performed in triplicate.
Quantification of Fap1. Surface expression of the fimbria-associated protein Fap1 was determined for S. parasanguis strains by a whole-bacterial-cell enzyme-linked immunosorbent assay (10) as described previously (31). Anti-Fap1 mouse monoclonal antibody, MAb F51 (11), was used as the primary antibody, followed by incubation with goat anti-mouse horseradish peroxidase-conjugated secondary antibody (Jackson ImmunoResearch Laboratories, Inc., West Grove, Pa.). Color development was quantified by measurement of absorbance at 490 nm with an EL311 Automated microplate reader (BIO-TEK, Instruments, Inc., Winooski, Vt.).
SDS-polyacrylamide gel electrophoresis and immunoblot analysis.
S. parasanguis cultures were grown to late-logarithmic phase
(5 × 108 cells ml
1), and cells from
1-ml aliquots were harvested by centrifugation. Bacterial pellets were
resuspended in 100 µl of sample buffer (62.5 mM Tris-HCl [pH 6.8],
10% glycerol, 2% sodium dodecyl sulfate [SDS], 5%
-mercaptoethanol), and 15 µl samples were analyzed by SDS-7.5%
polyacrylamide gel electrophoresis (20). Size-separated proteins were transferred to nitrocellulose membranes (Schleicher and
Schuell, Keene, N.H.) and examined by Western blotting (27). The membranes were blocked with a 5% (wt/vol) nonfat milk solution, probed with MAb F51, and then incubated with goat anti-mouse
horseradish peroxidase-conjugated secondary antibody as described
previously (31). Antibody conjugates were detected with a
chemiluminescence system as described by the manufacturer (NEN Life
Science Products, Boston, Mass.).
Nucleotide sequence accession number. The nucleotide sequence GenBank accession no. is AF069745.
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RESULTS AND DISCUSSION |
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Isolation of the S. parasanguis recA gene. An S. parasanguis recA mutant was required to facilitate further genetic studies and to assess the role of recombination in the expression of adherence factors in this organism. The cloning and characterization of the recA gene of S. parasanguis was the first step in the construction of such a mutant.
First, degenerate oligonucleotide primers were used in a PCR to amplify an internal fragment of the S. parasanguis recA gene. The predicted amino acid sequences of previously characterized recA genes from five gram-positive bacteria, B. subtilis, L. lactis, S. mutans, S. pneumoniae, and S. pyogenes, were aligned. Two well-conserved domains, approximately 196 amino acids apart, were used to design degenerate oligonucleotide primers. PCR with this primer pair and S. parasanguis genomic DNA resulted in amplification of a 640-bp PCR product. The PCR product was cloned, and the nucleotide base sequences of both strands were determined. The DNA fragment contained an uninterrupted open reading frame encoding a sequence of amino acids that has 98% and 66% identity with the corresponding regions of the S. pneumoniae and E. coli RecA proteins, respectively. This result indicated that an internal portion of the S. parasanguis recA gene had been cloned successfully. Next, a restriction site map of the S. parasanguis recA region (Fig. 1) was constructed by Southern hybridization analyses and from DNA sequence data obtained from the cloned internal recA fragment. It was determined that the S. parasanguis recA gene resided on a ca. 3.1-kb HindIII-EcoRI fragment (Fig. 1), and subsequently, a partial genomic library of 2.3- to 4.4-kb HindIII-EcoRI fragments was constructed and pVT1356 was identified by colony hybridization. Results of DNA sequence analyses confirmed that pVT1356 contained the entire coding region of S. parasanguis recA as well as regions upstream and downstream of the gene.
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Construction of a recA mutant in S. parasanguis. The isolation of a well-characterized recA mutant could most easily be obtained by disruption of the cloned gene with a selectable marker and reintroduction of the mutated sequence into the chromosome of S. parasanguis. This was done with an efficient gene replacement protocol developed in this laboratory (12). The plasmid used for the recA allelic replacement experiments was pVT1290. Since pVT1290 is unable to replicate in streptococcal cells, recombination with homologous chromosomal DNA must occur for the generation of a recA-deficient strain. Plasmid pVT1290 was transformed into wild-type S. parasanguis FW213 by electroporation. It was expected that transformants arising by allelic replacement would be Kmr and Tcs; transformants arising from a single crossover event would contain the entire plasmid integrated into the chromosome at the recA region. Such derivatives would be both Kmr and Tcr and would carry a wild-type copy and a mutant copy of recA. Therefore, Kmr transformants were tested on TH agar plates containing tetracycline. Kmr Tcs derivatives were tentatively scored as having resulted from an allelic replacement event.
Southern hybridization analysis was used to verify the allelic replacement event. DNA was prepared from several Kmr Tcs transformants and from the wild-type strain FW213 and digested with BamHI. The DNA fragments were separated by electrophoresis, transferred to a nylon membrane, and hybridized with 32P-labeled pVT1185, which carries the 640-bp internal recA fragment. DNA from two of the transformants gave a hybridization pattern indicative of allelic replacement (Fig. 2A, lanes 2 and 3). The recA probe hybridized with a single 2.0-kb BamHI restriction fragment in the wild-type strain (Fig. 2A, lanes 1 and 4); the 2.0-kb fragment was absent in the two putative recA mutants and replaced by a band at 3.5 kb.
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Phenotypic characterization of the S. parasanguis recA mutant. One transformant, designated VT1354, was chosen for study. Since recA mutants are expected to be significantly more sensitive to DNA-damaging agents than their isogenic parental strain, VT1354 was tested for its sensitivity to UV irradiation. A UV survival curve was constructed for FW213 and VT1354 (Fig. 3). The resistance to UV exposure of VT1354 was significantly lower than that of the parental strain. At each UV-light dose tested, VT1354 was approximately 1,000-fold more sensitive to UV irradiation than FW213. This increased sensitivity of VT1354 to UV light is consistent with a recA mutant phenotype.
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Expression of the fimbria-associated adhesin Fap1 in the S. parasanguis recA mutant. In N. gonorrhoeae the recA gene is involved in the expression of pilus antigenic variation and in phase transitions (18), and in V. cholerae recA is required for the expression of adherence and colonization factors (19). Many of the adherence- and virulence-associated factors of the streptococci are cell surface polypeptides containing amino acid repeat blocks; several of these adherence factors are high-molecular-mass cell wall proteins (17). In some cases, the repeated sequence blocks within these proteins have been implicated in binding to substrates within the mammalian host. Although the repeat sequences within the genes coding for these proteins could serve as potential sites for homologous recombination events, it is not known whether expression of these streptococcal adherence and colonization factors is affected by recA.
Recently, the fimbria-associated adhesin Fap1 was identified in S. parasanguis FW213 (31). This adhesin is also a high-molecular-mass streptococcal surface protein that contains extensive amino acid repeat blocks. Fap1 is involved in adhesion of S. parasanguis to an in vitro tooth surface model, SHA, and also appears to be important in the expression of fimbriae, surface structures that mediate attachment to the tooth surface by S. parasanguis FW213. Because of the presence of repeat regions in Fap1 and because recA plays a role in the expression of adherence- and virulence-associated factors in other bacteria, we asked whether the recA gene of S. parasanguis FW213 was required for the expression of Fap1 or for the adherence of S. parasanguis to SHA. Three independent measures were employed to determine whether inactivation of the recA gene affected production of Fap1. First, relative immunoreactivities of S. parasanguis FW213 or recA mutant VT1354 were compared in a whole-bacterial-cell enzyme-linked immunosorbent assay with the anti-Fap1 MAb, MAb F51. Experiments were performed in quadruplicate, and standard deviations did not exceed 5% of the mean. Reactivity of MAb F51 with wild-type or with recA mutant cells did not differ significantly (data not shown), suggesting that the recA mutation did not alter the cell surface expression of the Fap1 fimbria-associated adhesin. It was shown previously that fap1 encodes a 200-kDa protein (31). Immunoblot analysis with MAb F51 was used to compare the abilities of the wild-type and recA mutant cells to synthesize the 200-kDa protein. The MAb detected a 200-kDa protein in both the wild-type and recA-deficient strains (Fig. 4). Furthermore, the amounts of the Fap1 protein produced by the wild-type strain and by its recA derivative seem to be roughly equivalent. This result suggests that production of Fap1 is unaffected in the S. parasanguis recA mutant.
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Conclusions. The entire recA gene from the oral bacterium S. parasanguis FW213 was cloned, and its nucleotide base sequence was determined. The deduced S. parasanguis recA gene product, RecA, showed a high level of amino acid identity with RecA proteins from other prokaryotic species. A defined mutation within the cloned S. parasanguis recA gene was constructed in vitro and reintroduced into the streptococcal chromosome by transformation. An S. parasanguis recA mutant, obtained by allelic replacement, behaved similarly to recA mutants of other prokaryotic species, suggesting that the functional activities of the recA gene products are conserved as well. Finally, recA is not required for the in vitro expression of the fimbria-associated adhesin Fap1 or for adherence of S. parasanguis to SHA. We anticipate that the recA-deficient strain described here will be a valuable tool in future genetic studies of S. parasanguis FW213.
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ACKNOWLEDGMENTS |
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This work was supported by Public Health Service grant R37-DE11000 from the National Institutes of Health. M. Tomich was the recipient of an Undergraduate Summer Research Fellowship from the Department of Microbiology and Molecular Genetics at the University of Vermont.
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FOOTNOTES |
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* Corresponding author. Mailing address: University of Vermont, Department of Microbiology & Molecular Genetics, Stafford Hall, Burlington, VT 05405. Phone: (802) 656-1121. Fax: (802) 656-8749. E-mail: pfivesta{at}zoo.uvm.edu.
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REFERENCES |
|---|
|
|
|---|
| 1. | Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410[Medline]. |
| 2. | Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. A. Smith, J. G. Seidman, and K. Struhl (ed.). 1989. Current protocols in molecular biology. John Wiley & Sons, Inc., New York, N.Y. |
| 3. |
Baddour, L. M.
1994.
Virulence factors among gram-positive bacteria in experimental endocarditis.
Infect. Immun.
62:2143-2148 |
| 4. | Burnette-Curley, D., V. Wells, H. Viscount, C. L. Munro, J. C. Fenno, P. Fives-Taylor, and F. L. Macrina. 1995. FimA, a major virulence factor associated with Streptococcus parasanguis endocarditis. Infect. Immun. 63:4669-4674[Abstract]. |
| 5. | Clark, A. J. 1973. Recombination deficient mutants of E. coli and other bacteria. Annu. Rev. Genet. 7:67-86[Medline]. |
| 6. | Cole, R. M., G. B. Calandra, E. Huff, and K. M. Nugent. 1976. Attributes of potential utility in differentiating among `group H' streptococci or Streptococcus sanguis. J. Dent. Res. 55:A142-A153. |
| 7. |
Duwat, P.,
S. D. Ehrlich, and A. Gruss.
1992.
A general method for cloning recA genes of gram-positive bacteria by polymerase chain reaction.
J. Bacteriol.
174:5171-5175 |
| 8. |
Duwat, P.,
S. D. Ehrlich, and A. Gruss.
1992.
Use of degenerate primers for polymerase chain reaction cloning and sequencing of the Lactococcus lactis subsp. lactis recA gene.
Appl. Environ. Microbiol.
58:2674-2678 |
| 9. |
Dybvig, K.,
S. K. Hollingshead,
D. G. Heath,
D. B. Clewell,
F. Sun, and A. Woodard.
1992.
Degenerate oligonucleotide primers for enzymatic amplification of recA sequences from gram-positive bacteria and mycoplasmas.
J. Bacteriol.
174:2729-2732 |
| 10. |
Elder, B. L.,
D. K. Boraker, and P. M. Fives-Taylor.
1982.
Whole bacterial cell enzyme-linked immunosorbent assay for Streptococcus sanguis fimbrial antigens.
J. Clin. Microbiol.
16:141-144 |
| 11. |
Fachon-Kalweit, S.,
B. L. Elder, and P. Fives-Taylor.
1985.
Antibodies that bind to fimbriae block adhesion of Streptococcus sanguis to saliva-coated hydroxyapatite.
Infect. Immun.
48:617-624 |
| 12. | Fenno, J. C., A. Shaikh, and P. Fives-Taylor. 1993. Characterization of allelic replacement in Streptococcus parasanguis: transformation and homologous recombination in a `nontransformable' streptococcus. Gene 130:81-90[Medline]. |
| 13. | Fenno, J. C., A. Shaikh, G. Spatafora, and P. Fives-Taylor. 1995. The fimA locus of Streptococcus parasanguis encodes an ATP-binding membrane transport system. Mol. Microbiol. 15:849-863[Medline]. |
| 14. |
Fives-Taylor, P. M.
1982.
Isolation and characterization of a Streptococcus sanguis FW213 mutant nonadherent to saliva-coated hydroxyapatite beads, p. 206-209.
In
D. Schlessinger (ed.), Microbiology 1982. American Society for Microbiology, Washington, D.C.
|
| 15. |
Fives-Taylor, P. M., and D. W. Thompson.
1985.
Surface properties of Streptococcus sanguis FW213 mutants nonadherent to saliva-coated hydroxyapatite.
Infect. Immun.
47:752-759 |
| 16. | Frandsen, E. V. G., V. Pedrazzoli, and M. Kilian. 1991. Ecology of viridans streptococci in the oral cavity and pharynx. Oral Microbiol. Immunol. 6:129-133[Medline]. |
| 17. |
Jenkinson, H. F., and R. J. Lamont.
1997.
Streptococcal adhesion and colonization.
Crit. Rev. Oral Biol. Med.
8:175-200 |
| 18. |
Koomey, M.,
E. C. Gotschlich,
K. Robbins,
S. Bergstrom, and J. Swanson.
1987.
Effects of recA mutations on pilus antigenic variation and phase transitions in Neisseria gonorrhoeae.
Genetics
117:391-398 |
| 19. |
Kumar, K. K.,
R. Srivastava,
V. B. Sinha,
J. Michalski,
J. B. Kaper, and B. S. Srivastava.
1994.
recA mutations reduce adherence and colonization by classical and El Tor strains of Vibrio cholerae.
Microbiology (Reading)
140:1217-1222 |
| 20. | Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685[Medline]. |
| 21. | Miller, R. V., and T. A. Kokjohn. 1990. General microbiology of recA: environmental and evolutionary significance. Annu. Rev. Microbiol. 44:365-394[Medline]. |
| 22. |
Oligino, L., and P. Fives-Taylor.
1993.
Overexpression and purification of a fimbria-associated adhesin of Streptococcus parasanguis.
Infect. Immun.
61:1016-1022 |
| 23. | Roca, A. I., and M. M. Cox. 1990. The RecA protein, structure and function. Crit. Rev. Biochem. Mol. Biol. 25:415-456[Medline]. |
| 24. | Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y. |
| 25. |
Thompson, J. D.,
D. G. Higgins, and T. J. Gibson.
1994.
CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
Nucleic Acids Res.
22:4673-4680 |
| 26. |
Tobian, J. A.,
M. L. Cline, and F. L. Macrina.
1984.
Characterization and expression of a cloned tetracycline resistance determinant from the chromosome of Streptococcus mutans.
J. Bacteriol.
160:556-563 |
| 27. |
Towbin, H.,
T. Staehelin, and J. Gordon.
1979.
Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.
Proc. Natl. Acad. Sci. USA
76:4350-4357 |
| 28. | Trieu-Cuot, P., and P. Courvalin. 1983. Nucleotide sequence of the Streptococcus faecalis plasmid gene encoding the 3'5'-aminoglycoside phosphotransferase type III. Gene 23:331-341[Medline]. |
| 29. |
Walker, G. C.
1984.
Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coli.
Microbiol. Rev.
48:60-93 |
| 30. |
Wilbur, W. J., and D. J. Lipman.
1983.
Rapid similarity searches of nucleic acid and protein data banks.
Proc. Natl. Acad. Sci. USA
80:726-730 |
| 31. | Wu, H., K. P. Mintz, M. Ladha, and P. M. Fives-Taylor. 1998. Isolation and characterization of Fap1, a fimbriae-associated adhesin of Streptococcus parasanguis FW213. Mol. Microbiol. 28:487-500[Medline]. |
| 32. | Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119[Medline]. |
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