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Journal of Bacteriology, December 1999, p. 7168-7175, Vol. 181, No. 23
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Renaturation of Recombinant Treponema pallidum Rare
Outer Membrane Protein 1 into a Trimeric, Hydrophobic, and
Porin-Active Conformation
Hongwei H.
Zhang,1
David R.
Blanco,1,2,*
Maurice M.
Exner,1
Ellen S.
Shang,1
Cheryl I.
Champion,1
Martin L.
Phillips,3
James N.
Miller,1 and
Michael A.
Lovett1,2
Department of Microbiology, Immunology, and
Molecular Genetics1 and Department of
Medicine,2 School of Medicine, and
Department of Chemistry and
Biochemistry,3 University of California at
Los Angeles, Los Angeles, California 90095
Received 29 June 1999/Accepted 21 September 1999
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ABSTRACT |
We have previously observed that while native Treponema
pallidum rare outer membrane protein 1 (Tromp1) is hydrophobic
and has porin activity, recombinant forms of Tromp1 do not possess these properties. In this study we show that these properties are
determined by conformation and can be replicated by proper renaturation of recombinant Tromp1. Native Tromp1, but not the 47-kDa
lipoprotein, extracted from whole organisms by using Triton X-114,
was found to lose hydrophobicity after treatment in 8 M urea,
indicating that Tromp1's hydrophobicity is conformation dependent.
Native Tromp1 was purified from 0.1% Triton X-100 extracts of whole
organisms by fast-performance liquid chromatography (FPLC) and shown to
have porin activity in planar lipid bilayers. Cross-linking studies of
purified native Tromp1 with an 11 Å cross-linking agent showed
oligomeric forms consistent with dimers and trimers. For renaturation
studies of recombinant Tromp1 (rTromp1), a 31,109-Da signal-less
construct was expressed in Escherichia coli and purified by
FPLC. FPLC-purified rTromp1 was denatured in 8 M urea and then renatured in the presence of 0.5% Zwittergent 3,14 during dialysis to
remove the urea. Renatured rTromp1 was passed through a Sephacryl S-300
gel exclusion column previously calibrated with known
molecular weight standards. While all nonrenatured rTromp1 eluted from
the column at approximately the position of the carbonic anhydrase protein standard (29 kDa), all renatured rTromp1 eluted at the position
of the phosphorylase b protein standard (97 kDa),
suggesting a trimeric conformation. Trimerization was confirmed by
using an 11 Å cross-linking agent which showed both dimers and trimers similar to that of native Tromp1. Triton X-114 phase separations showed
that all of renatured rTromp1, but none of nonrenatured rTromp1, phase
separated exclusively into the hydrophobic detergent phase,
similar to native Tromp1. Circular dichroism of nonrenatured and
renatured rTromp1 showed a marked loss in alpha-helical secondary structure of renatured rTromp1 compared to the nonrenatured form. Finally, renatured rTromp1, but not the nonrenatured form, showed porin
activity in planar liquid bilayers. These results demonstrate that
proper folding of rTromp1 results in a trimeric, hydrophobic, and
porin-active conformation similar to that of the native protein.
 |
INTRODUCTION |
The syphilis spirochete,
Treponema pallidum subsp. pallidum, possesses a
unique outer membrane containing 100-fold-less membrane-spanning outer
membrane protein than typical gram-negative bacterial outer membranes
(30, 38). The identification of these T. pallidum rare outer membrane proteins, collectively termed TROMPs
(9), has been a major focus of syphilis research because
they are surface exposed proteins of likely significance to both
pathogenesis and immunity.
We previously reported a method to isolate the T. pallidum
outer membrane (8) that resulted in the identification of
two proteins markedly enriched in these preparations. One of these proteins, termed Tromp1, was found to have properties consistent with
an outer membrane origin, including amphiphilicity and porin activity
measured in planar lipid bilayers (6). We also found that
recombinant Tromp1, expressed and exported in Escherichia coli, in part localized to the E. coli outer membrane,
where porin activity similar to that of native Tromp1 was again
demonstrated (7).
While our past findings have been consistent with Tromp1 being an outer
membrane protein, two recent reports have challenged this conclusion.
Hardham et al. (18) have found that the tromp1 gene, referred to as troA in their studies, is part of an
operon with similarities to ABC transporter systems, and that TroA has 26 to 28% sequence identity to the periplasmic binding protein component of these operons. This observation has resulted in the alternative view that Tromp1 is a periplasmic binding protein (18). Akins et al. (1) reported that native
Tromp1 has an uncleaved signal peptide which anchors Tromp1 to the
cytoplasmic membrane and accounts for its demonstrated hydrophobicity.
These investigators also reported that recombinant Tromp1, made
without a signal peptide, lacked hydrophobic properties and porin
activity, findings used to support their conclusion that Tromp1 is an
inner membrane anchored periplasmic binding protein. Thus, whether
Tromp1 is a bona fide outer membrane protein or periplasmic binding
protein has been a topic of current debate.
To address the controversy surrounding Tromp1, we have recently engaged
in a structural analysis of the native protein. We have conclusively
demonstrated, by use of mass spectrometry, that native Tromp1 has a
cleaved signal peptide (10) in contrast to the report by
Akins et al. (1). Implicit from this finding is that the
observed hydrophobicity of native Tromp1 is not due to an uncleaved
signal peptide as reported but is rather a property of its conformation.
In the present study, we show that denaturation of native Tromp1
eliminates its hydrophobicity, a finding consistent with the
conformation of Tromp1 being responsible for this property. In
addition, we show that purified native Tromp1, which has porin activity, exists in a trimeric conformation. These properties of native
Tromp1 are successfully recreated by using a signal-peptide-lacking form of recombinant Tromp1 which was renatured into a trimeric, hydrophobic, and porin-active conformation.
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MATERIALS AND METHODS |
Source of T. pallidum.
T. pallidum subsp.
pallidum, Nichols strain, was maintained by testicular
passage in New Zealand White rabbits as previously described
(24). T. pallidum used for all experiments was
extracted from infected rabbit testicles in phosphate-buffered saline,
pH 7.4 (PBS), centrifuged two times at 400 × g to
pellet gross tissue debris, and then centrifuged at 10,000 × g to pellet the organisms. The treponemal pellet was washed
once in PBS, recentrifuged to again pellet the organisms, and then
resuspended in PBS to yield a final concentration of 1010
organisms/ml.
FPLC purification of native Tromp1.
A total of 2 × 1011 T. pallidum, extracted from 20 infected
rabbits, was incubated in 40 ml of ice-cold 0.1% Triton X-100 (TX-100; Calbiochem) for 2 h in order to solubilize the outer membrane and
completely release Tromp1 (approximately 5 µg) (6). The suspension was then centrifuged at 20,000 × g for 40 min at 4°C in order to pellet the protoplasmic cylinders. The
supernatant, containing all of the Tromp1 and other detergent-extracted
proteins, was subjected to anion-exchange chromatography by using a
fast-performance liquid chromatography (FPLC) system (Pharmacia Co.,
Alameda, Calif.). The anion-exchange buffer consisted of 50 mM Tris-HCl
(pH 8.0) with 0.2% hydrogenated Triton X-100, and the proteins were
eluted by using a salt gradient of 0 to 1 M NaCl. Fractions enriched with Tromp1, determined by immunoblot analysis with monospecific anti-recombinant Tromp1 (rTromp1) serum generated as previously described (7), were collected, pooled, and rechromatographed under these conditions. The second round of Tromp1-enriched fractions was then subjected to chromatofocusing chromatography by using a MonoP
column (Pharmacia). The starting buffer contained of 25 mM bis-Tris (pH
6.7) with 0.1% hydrogenated Triton X-100, and the elution buffer
contained 10% Polybuffer, pH 5.0 (Pharmacia), containing 0.1%
hydrogenated Triton X-100. After chromatofocusing, Tromp1 purity was
demonstrated by silver stain (see Fig. 2) and immunoblot analysis by
using syphilitic infection-derived immune rabbit serum (data not
shown). The total amount of recovered native Tromp1 from 2 × 1011 organisms was estimated by gel analysis to be 500 ng
(10% recovery). A total of 10 isolations, each using 2 × 1011 organisms (a total of 200 infected rabbits), were
performed which resulted in the isolation of 5 µg of purified native Tromp1.
Expression of a signal-less form of rTromp1.
A signal-less
form of recombinant Tromp1 (rTromp1), having a calculated molecular
mass of 31,109 Da, was generated as follows. An N-terminal primer of
5'-CGCCATATGAGCAAGGATGCCGCAGCAGAC-3' (underlined region indicates the tromp1 gene sequence) corresponding to
signal peptide cleavage after alanine-phenylalanine-glycine (AFG) was generated containing an NdeI restriction endonuclease site
at the 5' end (Gibco BRL, Gaithersburg, Md.). This construct results in
a single methonine residue placed ahead of the site of signal peptide
cleavage for the purpose of translation. A C-terminal primer consisting
of 5'-CGCGGATCCCTAGCGAGCCAACGCAGCAA-3' and
corresponding to the end of the tromp1 gene was generated
containing a BamHI restriction endonuclease site at the 5'
end. PCR was performed by using these primers as described previously
(7). The tromp1 PCR product was ligated into
pET17b (Novagen, Inc.), previously digested with NdeI and
BamHI. The resulting construct was transformed into E. coli BL21(DE3)(pLysE) (Novagen, Inc.) by using cells made competent by CaCl2. Expression and FPLC purification of
rTromp1 was performed as described previously (7).
Renaturation of rTromp1.
The protocol described by Qi et al.
(27) for the renaturation of recombinant neisserial porin
proteins was used for the renaturation of signal-less rTromp1 as
follows. Solid urea was added to 1 ml of FPLC-purified rTromp1 (2 mg/ml) in 50 mM Tris-100 mM NaCl-0.05% Zwittergent-3,14
(Calbiochem-Novabiochem Corp., La Jolla, Calif.) at pH 8.0 to give a
final concentration of 8 M urea. The suspension was then boiled for 15 min in order to completely denature rTromp1. After denaturation, the
suspension was added to an equal volume of 1% Zwittergent-3,14
(Calbiochem-Novabiochem Corp.) and then dialyzed overnight at 4°C
against a buffer containing 100 mM Tris, 200 mM NaCl, 10 mM EDTA, and
0.02% sodium azide at pH 8.0 in order to remove the urea and renature
rTromp1. The renatured rTromp1 suspension was then applied to a
Sephacryl S-300 column (1.5 by 75 cm; Pharmacia Biotech, Inc.), which
was equilibrated in the same buffer used for dialysis and which had
been previously calibrated with known molecular mass standards (gel
filtration molecular weight markers; Sigma Chemical Co.). In some
experiments, FPLC-purified rTromp1 was added directly to the column
without prior denaturation and renaturation treatment. Fractions
containing rTromp1 were identified by spectrophotometry (optical
density at 280 nm) and by sodium dodecyl sulfate-polyacrylamide gel
electrophoresis (SDS-PAGE) and immunoblot analysis. Renatured rTromp1
samples were stored at
70°C.
Cross-linking experiments.
Renatured and nonrenatured
rTromp1 and native Tromp1 were dialyzed against PBS. Twenty-five
microliters of each of the Tromp1 preparations containing 1 µg of
protein was mixed with an equal volume of bis(sulfosuccinimidyl)
suberate (BS3) (Pierce, Rockford, Ill.) at various
concentrations. BS3 is a homobifunctional
N-hydroxysuccinimide ester (NHS-ester) which can form
noncleavable covalent bonds between N-terminal
-amine groups and/or
side chains of amino acids of peptides and proteins that are separated
by less than 11 Å;
-amine of lysine is the principle side chain
target for this NHS-ester (25). After 30 min of incubation
at room temperature, 1 M Tris (pH 7.5) was added to give a final
concentration of 40 mM in the reaction mixture, which was then
incubated for an additional 15 min at room temperature. The mixtures
were then dried by using a speed vacuum, and the dried contents were
resuspended in sample buffer containing 8 M urea. Samples were boiled
for 10 min prior to SDS-PAGE, followed by transfer to polyvinylidene
difluoride (PVDF) immunoblotting membranes. Immunoblotting for the
detection of Tromp1 was conducted as described below.
TX-114 treatments.
Triton X-114 (TX-114; Calbiochem)
detergent extraction of T. pallidum and separation of the
extracted material into detergent (hydrophobic) and aqueous
(hydrophilic) phases was performed as follows. Ten microliters of
treponemal suspension (108 T. pallidum) was
added to 500 µl of ice-cold 0.1% TX-114 in PBS. The suspension was
incubated at 4°C for 2 h to selectively solubilize the outer
membrane, followed by centrifugation at 13,000 × g to pellet the treponemal protoplasmic cylinders. This procedure, using 2%
TX-114, has been shown not to solubilize the inner membrane of T. pallidum (12, 29). The protoplasmic cylinders were
washed once in PBS and then recentrifuged prior to resuspension in
SDS-PAGE sample buffer containing 2% SDS, 5% 2-mercaptoethanol, and
15% glycerol in 100 mM Tris (pH 6.8). To the extracted supernatant, 100 µl of 10% TX-114 was added (final concentration of 2.1%
detergent) prior to warming at 37°C for 5 min to induce cloud
formation. The suspension was then centrifuged at 13,000 × g for 5 min at room temperature in order to separate aqueous (top)
and detergent (bottom) phases. Both aqueous and detergent phases were
recovered and reextracted three times as described above with cold 2%
Triton X-114 and PBS, respectively. In some experiments, urea treatment of T. pallidum was performed prior to TX-114 extraction and
phase separation as follows. Ten microliters of treponemal suspension (108 T. pallidum) was combined with 70 µl of 8 M urea (final concentration of 7 M urea), followed by heating at 90°C
for 10 min. The suspension was then cooled and added to 500 µl of
0.1% TX-114. Extraction and phase separation was performed as
described above.
TX-114 phase separations with rTromp1 were performed as follows. Two
micrograms of nonrenatured or renatured rTromp1 was added to 500 µl
of 2% TX-114 in PBS. Phase separations were then conducted as
described above.
All final aqueous and detergent phases from TX-114 phase separating
experiments were combined with 10 volumes of ice-cold acetone, and the
resulting precipitate was recovered by centrifugation at
10,000 × g for 30 min. Pellets were solubilized in
sample buffer, subjected to SDS-PAGE by using 12% acrylamide slab
gels, and then transferred to PVDF blotting membranes as previously
described (35). For immunoblotting, PVDF membranes were
probed with anti-rTromp1 serum, generated as previously described
(7), which was diluted 1:1,000 in 5% nonfat dry milk in
PBS. Antigen-antibody binding was detected using the Amersham enhanced
chemiluminescence system.
Porin assays.
The pore-forming ability of native and
recombinant Tromp1 was examined by using planar lipid bilayers
(5). Lipid bilayers made from 1.5% (wt/vol) oxidized
cholesterol in n-decane were formed across a
0.2-mm2 hole separating two compartments of a Teflon
chamber containing a 1 M KCl bathing solution. Bilayer formation was
recognized by the fact that the membrane appeared black when viewed by
incident light. Calomel electrodes were implanted in each compartment, with one connected to a voltage source and one connected to a current
amplifier. Conductance data were recorded on a strip chart recorder for
further analysis. Native and rTromp1 samples were diluted in 1 M KCl
containing 0.1% Triton X-100 to yield a final concentration of
approximately 1 µg of Tromp1 protein per ml of solution. Ten
microliters of diluted sample, containing approximately 10 ng of Tromp1
protein, was added to the 1 M KCl bathing solution. Pore-forming
ability was then assessed by applying a voltage of 50 mV across the
lipid bilayer and measuring the increases in conductance.
CD analysis.
Circular dichroism (CD) analysis was performed
on a JASCO J-600 spectropolarimeter by using a scan speed of 5 nm/min,
a time constant of 8 s, and a bandwidth of 1.0 nm. Four scans were
averaged for each spectrum. The baseline correction option was used to subtract a buffer baseline. Spectra were recorded from 240 to 190 nm in
1-mm pathlength cells with protein concentrations of 0.1 to 0.2 mg/ml.
Spectra were analyzed for secondary structure by using a neural network
algorithm (2, 23).
 |
RESULTS |
The hydrophobicity of native Tromp1 is conformation dependent.
In order to investigate the basis of Tromp1's hydrophobicity, urea
treatment was utilized to test whether denaturing conditions have an
effect upon this property. As previously reported (6) and
again shown in Fig. 1A, 0.1% TX-114
detergent extraction of whole organisms, known to completely solubilize
the T. pallidum outer membrane (12, 29), resulted
in the complete release of Tromp1 with no detection present in the
protoplasmic cylinders (lane P). Upon phase separation of the released
material, all of the Tromp1 was present in the detergent phase (lane
D), once again demonstrating the hydrophobicity of native Tromp1.
However, when whole organisms were first treated with 8 M urea at
90°C prior to TX-114 extraction and phase separation, all of the
Tromp1 now phase separated into the hydrophilic aqueous phase (Fig. 1B, lane A), indicating the complete loss of its hydrophobic nature. By
comparison, when this same immunoblot was reprobed with a monoclonal antibody against the hydrophobic 47-kDa lipoprotein (Fig. 1C), this
protein was found to remain in the detergent phase, and no detection in
the aqueous phase was observed. In addition, a significant amount of
47-kDa lipoprotein remained associated with the protoplasmic cylinders
(lane P), in contrast to Tromp1 and consistent with the current belief
that the 47-kDa lipoprotein is inner membrane anchored (28).

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FIG. 1.
Hydrophobicity of native Tromp1 is conformation
dependent. A total of 108 T. pallidum organisms
were extracted in 0.1% TX-114 in the presence or absence of urea prior
to phase separation and SDS-PAGE. Transferred immunoblots contain whole
organisms (W), protoplasmic cylinders (P), aqueous-phase proteins (A),
and detergent-phase (D) proteins. Panels: A, urea-untreated fractions
probed with anti-Tromp1 serum ( Tromp1); B, urea-treated fractions
probed with Tromp1; C, the same blot as in panel B reprobed with a
monoclonal antibody against the 47-kDa lipoprotein ( 47-kDa LP).
Numbers on the left indicate the positions of the molecular weight
standards in thousands.
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Porin activity and trimer conformation of native Tromp1.
To
confirm the pore-forming activity of native Tromp1, isolated previously
by isoelectric focusing (6), and to analyze Tromp1's
structural characteristics, the native protein was purified from 0.1%
TX-100 detergent extracts of whole organisms by FPLC. The small amount
of Tromp1 present in T. pallidum and a 10% efficiency of recovery by using multiple steps of FPLC purification
resulted in the isolation of only 5 µg of purified native Tromp1 from
2 × 1012 organisms. The purity of the isolated
material was confirmed by silver staining after separation by SDS-PAGE.
As shown in Fig. 2, single stained bands
in amounts of 0.25 and 1.0 µg of electrophoresed Tromp1 were the only
proteins detected. These proteins reacted specifically with anti-Tromp1
antiserum by immunoblot analysis (data not shown).

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FIG. 2.
Purity of FPLC-isolated native Tromp1. Samples
containing 0.25 and 1.0 µg of FPLC-purified native Tromp1 were
separated by SDS-PAGE and silver stained. Numbers on the left indicate
the molecular weights (in thousands) of the standards separated.
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FPLC-purified native Tromp1 was next tested for porin activity by using
the black lipid bilayer assay (
5,
6). The addition
of
purified Tromp1 to the model membrane system resulted in channel
formation, which was demonstrated by stepwise conductance increases
across a lipid bilayer. As shown in Fig.
3, more than 136 membrane
insertion
events were observed with the measurement of conductance
increases
showing a distinct distribution about the mean of 0.96
± 0.33 nS
(± the standard deviation). This measurement was not
significantly
different from that of native Tromp1 isolated previously
by isoelectric
focusing, where the average measurement of conductance
was 0.7 ± 0.21 nS (
6). Interestingly, the smaller conductance
measurement of 0.14 nS also observed in the previous study was
not
observed with FPLC-purified native Tromp1. One possible explanation
for
the presence of a more typical unimodal distribution of porin
activity
in this study is the method of purification, which did
not employ
electrophoresis. Regardless of these subtle differences
in porin
activities, these findings confirm the pore-forming activity
of native
Tromp1 as previously reported (
6).

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FIG. 3.
Porin activity of native Tromp1. FPLC-purified native
Tromp1 was added to the aqueous-phase (1 M KCl) bathing a lipid bilayer
membrane. Histogram of single-channel conductance increases for over
136 membrane insertion events. Conductance increases showed a mean
distribution ca. 0.96 ± 0.33 nS (± the standard deviation).
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Because porin proteins of gram-negative bacteria exist in trimeric
conformations, we incubated purified native Tromp1 with
an 11-Å
cross-linking agent to determine whether Tromp1 also exists
in an
oligomeric form. As shown in Fig.
4,
samples of cross-linked
Tromp1 (1.0 and 2.0 mM BS
3
cross-linker) treated with urea containing sample buffer prior
to
SDS-PAGE and immunoblot analysis showed oligomeric forms of
the
protein consistent with dimers and trimers. Native Tromp1
not treated
with the cross-linking agent showed no oligomeric
forms. These
results are identical to reported studies with cross-linking
agents with the porins PhoE from
E. coli (
3),
OprP from
Pseudomonas aeruginosa (
34), and OmpL1
from
Leptospira kirschneri (
31).
Thus, these
results indicate that native Tromp1, like that for
other porin
proteins, exists in a trimeric conformation.

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FIG. 4.
Molecular cross-linking of FPLC-purified native Tromp1.
Samples containing 1 µg of native Tromp1 were incubated in the
cross-linker BS3 at the concentrations indicated. Samples
were separated by SDS-PAGE, immunoblotted, and probed with anti-Tromp1
serum. Arrows indicated the molecular mass position of monomeric Tromp1
and positions of putative dimeric and trimeric forms of Tromp1.
Numbers on the left indicate the positions of the molecular weight
standards (in thousands).
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Renaturation of a signal-less form of rTromp1 into a trimeric,
hydrophobic, and porin-active conformation.
In an attempt to
recreate the functional and structural properties observed for native
Tromp1, a 31,109-Da signal-peptide-lacking form of rTromp1 was
expressed, purified, and subjected to a renaturation procedure
previously reported for recombinant neisserial porins (27,
32). As shown in Fig. 5, all
renatured rTromp1 loaded onto a Sephacryl gel exclusion column,
previously calibrated with known molecular mass standards, eluted
at the position of the phosphorylase b standard, which is 97 kDa. By comparison, all nonrenatured rTromp1, loaded onto the same
column, eluted at the position of the carbonic anhydrase standard,
which is 29 kDa (Fig. 5, inset). This finding suggested that
renaturation resulted in the complete trimerization of all rTromp1.

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FIG. 5.
Sephacryl S-300 column elution profile of
renatured rTromp1. Renatured rTromp1 was loaded onto an S-300 column
previously calibrated with the following molecular mass standards: blue
dextran (200 kDa), phosphorylase b (97 kDa), bovine serum
albumin (BSA; 67 kDa), and carbonic anhydrase (29 kDa). The inset shows
the elution profile as a function of the log molecular mass versus the
eluted volume. Numbers in the inset indicate the following: 1, phosphorylase b; 2, renatured rTromp1; 3, bovine serum
albumin; 4, nonrenatured rTromp1; and 5, carbonic anhydrase.
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In order to confirm that renatured rTromp1 was in a trimeric
conformation, renatured and nonrenatured rTromp1 were both treated
with
the 11-Å cross-linking agent BS
3. As shown in Fig.
6, cross-linking treatment of
nonrenatured
rTromp1 showed no oligomeric forms. A slightly smaller
form was
detected, possibly reflecting altered mobility due to
intramolecular
cross-linking. By comparison, renatured rTromp1 treated
with the
cross-linking agent resulted in the detection of oligomeric
forms
consistent with dimers and trimers that were, again, similar to
those detected for native Tromp1.

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FIG. 6.
Molecular cross-linking of nonrenatured and renatured
rTromp1. Samples containing 1 µg of nonrenatured and renatured Tromp1
were incubated in the cross-linker BS3 at the
concentrations indicated. Samples were separated by SDS-PAGE,
immunoblotted, and probed with anti-Tromp1 serum. Arrows indicate the
molecular mass positions of monomeric rTromp1 and the positions of
putative dimeric and trimeric forms of rTromp1. Numbers on the
left indicate the positions of the molecular weight standards (in
thousands).
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In view of the demonstrated hydrophobicity of native Tromp1,
we tested whether renatured rTromp1 had also attained hydrophobic
properties. As shown in Fig.
7, TX-114
treatment of nonrenatured
rTromp1 resulted in the complete phase
separation of this material
into the aqueous phase. This same
finding was also recently reported
by Akins et al. (
1) for a
signal peptide lacking form of rTromp1.
In contrast, all of the
renatured rTromp1 was shown to phase separate
exclusively into the
detergent phase, indicating that renaturation
resulted in a
conformation with hydrophobic properties that were,
again, similar to
those of native Tromp1.

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FIG. 7.
Renatured rTromp1 is hydrophobic. Samples containing
nonrenatured and renatured rTromp1 were combined with TX-114 and phase
separated into aqueous (AQ) and detergent (DET) phases prior to
SDS-PAGE and immunoblotting. The blot was probed with anti-Tromp1
serum. Numbers on the left indicate the positions of the molecular
weight standards (in thousands).
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Finally, renatured rTromp1 was tested for porin activity. As shown in
Fig.
8, the addition of renatured rTromp1
to the model
membrane system resulted in channel formation, which was
demonstrated
by stepwise conductance increases across a lipid bilayer
(Fig.
8A). More than 104 membrane insertion events were observed (Fig.
8B), and the measurement of conductance increases showed a distinct
distribution about the mean of 0.65 ± 0.24 nS (± the standard
deviation). This measurement was also not significantly different
from that measured previously for rTromp1 localized to the
E. coli outer membrane after expression with its
native signal peptide
(
7). In the previous study, however, a
bimodal distribution
was observed resulting in activities of 0.76 ± 0.10 nS, a result
again similar to that observed in this study, and
0.4 ± 0.20 nS.
The observation in this study of a more typical
unimodal distribution
in porin activity may be the result of using
purified rTromp1
in contrast to the previous study where exported and
outer membrane-targeted
rTromp1 that was used also contained some
E. coli proteins. In
contrast, no channel activity was
observed after the addition
to the model membrane system of
nonrenatured rTromp1 (data not
shown). Thus, the results of this study
indicate that the demonstrated
porin activity of Tromp1 is dependent
upon its conformation.

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FIG. 8.
Porin activity of renatured rTromp1. Renatured rTromp1
was added to the aqueous phase (1 M KCl) bathing a lipid bilayer
membrane. (A) Step increases in conductance after the addition of
renatured rTromp1. (B) Histogram of single-channel conductance
increases for more than 104 membrane insertion events. Conductance
increases showed a mean distribution about 0.65 ± 0.24 nS (± the
standard deviation). No conductance activity was observed for
nonrenatured rTromp1 added to the lipid bilayer membrane (data not
shown).
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Comparison of nonrenatured and renatured rTromp1 by CD
spectroscopy.
In order to determine whether renaturation had
resulted in a measurable change in the secondary structure of rTromp1,
both nonrenatured and renatured rTromp1 were analyzed by CD
spectroscopy. The CD spectrum of nonrenatured rTromp1 displayed
prominent double minima (negative peaks) at 208 and 222 nm (Fig.
9), findings typical for a protein with
considerable alpha-helical secondary structure. By using a
neural network algorithm (2, 23) nonrenatured rTromp1 was
calculated to possess 48% alpha-helix, 18% beta-sheet, and 34%
random coil. Similar findings have been reported by Akins et al.
(1) for their signal-peptide-lacking form of recombinant Tromp1. In contrast, the CD spectrum of renatured rTromp1 reflected a
loss of alpha-helical structure, with the magnitude of the 222- and
208-nm peaks reduced relative to nonrenatured rTromp1 and the 222-nm
peak reduced relative to the 208-nm peak. Renatured rTromp1 was
calculated to contain 26% alpha-helix, 17% beta-sheet, and 57%
random coil. These findings provide quantitative evidence that
renaturation of rTromp1 leads to changes in the secondary structure of
the molecule, with the renatured form having less alpha-helix than the
nonrenatured form.

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|
FIG. 9.
Secondary structure analysis of nonrenatured and
renatured rTromp1 by CD spectroscopy. The double minimum
absorbances displayed by nonrenatured rTromp1 (solid line) is typical
of proteins with a high percentage of alpha-helix. By comparison,
renatured rTromp1 (dotted line) showed a distinct loss in absorbance at
222 nm, indicating a loss in alpha-helical secondary structure.
|
|
 |
DISCUSSION |
Protein conformation has been recognized for gram-negative
membrane-spanning outer membrane porins to be a key factor to their structural and functional properties (11). Immunologically
relevant epitopes involved in bactericidal activity have been
attributed to porin conformation (14, 34, 39). Structural
analysis of porins, including X-ray crystallography studies, has only
been performed with purified native porins because native conformation of these proteins has not been faithfully replicated with recombinant forms. However, there has been progress in this area since it has been
shown recently that recombinant forms of the gonococcal, meningococcal,
and Haemophilus influenzae porins can be renatured into
conformations which have several properties in common with their
respective native proteins, including trimerization and porin function
(26, 27, 32), suggesting that native conformation is
attainable with a recombinant.
The importance of renaturation of a recombinant porin protein has
particular significance to the study of porins of T. pallidum, an organism which can only be acquired in limited
numbers from infected animals and whose membrane-spanning outer
membrane protein content is 100-fold less than that of typical
gram-negative bacteria (30, 38). These limitations have all
but eliminated the use of native T. pallidum porin for
structural studies which require milligram quantities of material, such
as for X-ray crystallography, which will undoubtedly rely in the future
on a renatured recombinant.
In this study, the ability to renature a signal-peptide-lacking form of
recombinant Tromp1 into a hydrophobic, trimeric, and porin-functional conformation, properties which we also show for native
Tromp1, provides strong evidence that the conformation of Tromp1 is a
central issue to the native biological properties of this protein.
Indeed, denaturation of native Tromp1 with the chaotropic agent urea
abrogates the hydrophobicity of the native protein, a property which is
consistent with Tromp1 being located in the outer membrane.
The significance of these findings has important implications in view
of recent reports pertaining to Tromp1. Akins et al. reported that a
signal-peptide-lacking construct of recombinant Tromp1 was not
hydrophobic and showed no porin activity as demonstrated by the
liposome swelling assay (1). These findings were used to
support the conclusion by these investigators that Tromp1 is not an
outer membrane protein. In a recent further study with recombinant
Tromp1 (TroA) constructs containing and lacking a signal peptide, these
investigators have again concluded that the hydrophobicity of native
Tromp1 is the result of its hydrophobic signal peptide (13).
However, our recent mass spectrometry analysis of the hydrophobic form
of native Tromp1 has now clearly demonstrated that the signal peptide
is cleaved (10). Recently, a crystal structure of a
nonrenatured monomeric form of recombinant Tromp1 (TroA) has been
reported and used to conclude that Tromp1 (TroA) is a periplasmic
zinc-binding protein (13, 21). While the finding that
recombinant Tromp1 monomers can bind zinc may have important
implications in regard to its structure and function, our findings that
native Tromp1 and renatured recombinant Tromp1 are
trimeric in conformation have provided structural data which is
inconsistent with Tromp1 being a typical metal-binding periplasmic protein, since these proteins have been shown to be single
polypeptide chain monomers in their functional state (19,
37). In addition, the hydrophobicity and porin activity of both
native and renatured recombinant Tromp1 are also inconsistent with its
being a typical periplasmic binding protein.
One possible explanation for this paradox is that divergent evolution
has enabled pathogenic bacteria to use homologues of ABC transporter
operons for diverse purposes related, perhaps, to biological function
and pathogenesis. Consistent with this possibility is the finding that
a related ABC operon system is also found with the surface adhesin
proteins of streptococci. Here the periplasmic binding protein
homologue is replaced by a surface adhesin (20, 22), which
interestingly, also shares 23 to 28% sequence identity to Tromp1
(6). Yet another example where a gene encoding a surface
layer protein occupies the position analogous to that of
tromp1 in an ABC transporter operon is found in
Caulobacter crescentis (4). Thus, the observation
that Tromp1 has biological properties consistent with an outer membrane
porin protein but has genetic homology to ABC transporter components from gram-negative and gram-positive bacteria may not be inconsistent in the context of a divergent evolutionary process of genes from this spirochete.
Although Tromp1 has physical properties consistent with outer membrane
porin proteins from gram-negative bacteria, including hydrophobicity
and trimer conformation, it does not appear to share secondary
structure characteristics with these proteins. Porins of gram-negative
bacteria are known to possess significant amounts of beta-sheet
secondary structure, usually greater than 50%, and very little
alpha-helical secondary structure, usually less than 15%
(36). This has also been found to be the case for the
pathogenic spirochete L. kirschneri, whose porin protein OmpL1 has 61% beta-sheet and 19% alpha-helical secondary
structure (17). By comparison, computer analysis of the
amino acid sequence of Tromp1 has revealed only 34% beta-sheet
secondary structure and 56% alpha-helix secondary structure.
While CD analysis of renatured recombinant Tromp1 showed a
significant loss of alpha-helical secondary structure compared to the
nonrenatured recombinant, no corresponding increase in beta-sheet
secondary structure was observed. One possible explanation for this
finding is that renatured recombinant Tromp1 may not have faithfully
replicated native conformation. An alternative explanation for these
observations is that membrane-spanning outer membrane proteins of
T. pallidum may utilize a secondary structure conformation
other than the beta-sheet to span the outer membrane. It is pertinent
to note that the T. pallidum outer membrane, unlike that of
gram-negative bacteria or other spirochetes with the exception of
Borrelia burgdorferi, does not contain lipopolysaccharide. It is also pertinent to note that analysis of the recently released genome sequences of T. pallidum and B. burgdorferi (15, 16) have not revealed any protein with
typical gram negative porin protein secondary structure
characteristics. Thus, the outer membrane-spanning proteins of these
two spirochetes, while having functional properties similar to those of
gram-negative outer membrane proteins, may have quite different
membrane-spanning structural properties.
The renaturation of recombinant Tromp1 into a conformation which
parallels that of the native protein has now provided for sufficient
amounts of material to be used in studies designed to address issues of
pathogenesis and host immunity. To date, no T. pallidum
recombinant protein used for immunization has elicited complete
protective immunity in experimental animals comparable to that achieved
by infection-derived immunity.
In summary, the results presented in this study demonstrate that the
properties of native Tromp1, an outer-membrane-associated protein that
is hydrophobic, trimeric in structure, and porin active, can be
successfully recreated by renaturation of purified recombinant Tromp1.
We believe that native conformation of T. pallidum outer
membrane proteins will be found to be a critical issue in determining
the role of these proteins in syphilis pathogenesis and immunity.
 |
ACKNOWLEDGMENTS |
We thank Xiao-Yang Wu for his excellent technical assistance in
this study.
This work was supported by U.S. Public Health Service grants AI-21352
and AI-12601 (to M.A. Lovett) and AI-37312 (to J.N. Miller).
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Microbiology, Immunology, and Molecular Genetics, CHS 43-239, UCLA
School of Medicine, 10833 LeConte Ave., Los Angeles, CA 90095-1747. Phone: (310) 206-6510. Fax: (310) 206-3865. E-mail:
dblanco{at}microimmun.medsch.ucla.edu.
 |
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Journal of Bacteriology, December 1999, p. 7168-7175, Vol. 181, No. 23
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Copyright © 1999, American Society for Microbiology. All rights reserved.
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