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Journal of Bacteriology, March 1999, p. 1861-1867, Vol. 181, No. 6
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Purification and Characterization of Two Extremely Thermostable
Enzymes, Phosphate Acetyltransferase and Acetate Kinase, from the
Hyperthermophilic Eubacterium Thermotoga maritima
Anne-Katrin
Bock,1
Jürgen
Glasemacher,1
Roland
Schmidt,2 and
Peter
Schönheit3,*
Institut für Pflanzenphysiologie und
Mikrobiologie, Freie Universität Berlin, D-14195
Berlin,1 Fachbereich Biologie/Chemie,
Arbeitsgruppe Mikrobiologie, Universität Osnabrück, D-49069
Osnabrück,2 and Institut
für Allgemeine Mikrobiologie,
Christian-Albrechts-Universität Kiel, D-24118
Kiel,3 Germany
Received 22 September 1998/Accepted 6 January 1999
 |
ABSTRACT |
Phosphate acetyltransferase (PTA) and acetate kinase (AK) of the
hyperthermophilic eubacterium Thermotoga maritima have been purified 1,500- and 250-fold, respectively, to apparent homogeneity. PTA had an apparent molecular mass of 170 kDa and was composed of one
subunit with a molecular mass of 34 kDa, suggesting a homotetramer (
4) structure. The N-terminal amino acid sequence showed
significant identity to that of phosphate butyryltransferases from
Clostridium acetobutylicum rather than to those of known
phosphate acetyltransferases. The kinetic constants of the reversible
enzyme reaction (acetyl-CoA + Pi
acetyl
phosphate + CoA) were determined at the pH optimum of pH 6.5. The
apparent Km values for acetyl-CoA,
Pi, acetyl phosphate, and coenzyme A (CoA) were 23, 110, 24, and 30 µM, respectively; the apparent
Vmax values (at 55°C) were 260 U/mg (acetyl
phosphate formation) and 570 U/mg (acetyl-CoA formation). In addition
to acetyl-CoA (100%), the enzyme accepted propionyl-CoA (60%) and butyryl-CoA (30%). The enzyme had a temperature optimum at 90°C and
was not inactivated by heat upon incubation at 80°C for more than
2 h. AK had an apparent molecular mass of 90 kDa and consisted of
one 44-kDa subunit, indicating a homodimer (
2)
structure. The N-terminal amino acid sequence showed significant
similarity to those of all known acetate kinases from eubacteria as
well that of the archaeon Methanosarcina thermophila. The
kinetic constants of the reversible enzyme reaction (acetyl
phosphate + ADP
acetate + ATP) were determined at the pH
optimum of pH 7.0. The apparent Km values for
acetyl phosphate, ADP, acetate, and ATP were 0.44, 3, 40, and 0.7 mM,
respectively; the apparent Vmax values (at 50°C) were 2,600 U/mg (acetate formation) and 1,800 U/mg (acetyl phosphate formation). AK phosphorylated propionate (54%) in addition to acetate (100%) and used GTP (100%), ITP (163%), UTP (56%), and
CTP (21%) as phosphoryl donors in addition to ATP (100%). Divalent
cations were required for activity, with Mn2+ and
Mg2+ being most effective. The enzyme had a temperature
optimum at 90°C and was stabilized against heat inactivation by
salts. In the presence of (NH4)2SO4
(1 M), which was most effective, the enzyme did not lose activity upon
incubation at 100°C for 3 h. The temperature optimum at 90°C
and the high thermostability of both PTA and AK are in accordance with
their physiological function under hyperthermophilic conditions.
 |
INTRODUCTION |
Acetate is an important end product
of energy-yielding fermentation processes of many anaerobic and
facultative procaryotes. Generally acetate is formed from acetyl
coenzyme A (acetyl-CoA), a central intermediate of metabolism.
The mechanism of conversion of acetyl-CoA to acetate in
prokaryotes, which is coupled with ATP formation, has recently been
shown to be dependent on the phylogenetic domain to which the organisms
belong (33, 34). (i) In all eubacteria analyzed, acetyl-CoA
is converted to acetate by the "classical" mechanism involving two
enzymes, phosphate acetyltransferase (PTA) (EC 2.3.1.8) and acetate
kinase (AK) (EC 2.7.2.1). ATP is formed in the acetate kinase reaction
by the mechanism of substrate-level
phosphorylation. Acetyl-CoA + Pi
acetyl phosphate + CoA (PTA) Acetyl phosphate + ADP
acetate + ATP (AK)
(ii) In all acetate forming archaea studied so far,
including anaerobic hyperthermophiles and aerobic mesophilic
halophiles, the conversion of acetyl-CoA to acetate and the formation
of ATP from ADP and phosphate is catalyzed by only one enzyme, an
acetyl-CoA synthetase (ADP forming) (33,
34). Acetyl-CoA + ADP + Pi
acetate + ATP + CoA
This unusual synthetase, which was first discovered in
the anaeobic eukaryote Entamoeba histolytica
(23, 30), is part of a novel mechanism of acetate formation
and energy conservation in prokaryotes.
Acetate also serves as substrate of catabolism and anabolism in several
aerobic and anaerobic prokaryotes. The activation of acetate to
acetyl-CoA, which is the first step prior to its utilization in
metabolism, is catalyzed either by a single enzyme, an AMP-forming
acetyl-CoA synthetase (EC 6.2.1.1) (acetate + CoA + ATP
acetyl-CoA + AMP + PPi) or by the AK-PTA couple
operating in the reverse direction as described above (12, 33, 36, 40). Besides their function in acetate metabolism, PTA and AK play a role, via acetyl phosphate, in various other processes. For
example, in Escherichia coli, acetyl phosphate functions as the phosphoryl donor of response regulator proteins of two-component systems, and a function as a global regulatory signal has therefore been proposed (22, 44).
To date, acetate kinases and phosphate acetyltransferases have been
purified from various bacteria and from the archaeon
Methanosarcina thermophila. However, these enzymes have not
yet been isolated and characterized from hyperthermophilic prokaryotes,
which are considered to represent the most ancient living organisms
(39).
We have recently studied the glucose metabolism of the
hyperthermophilic Thermotoga maritima,
(Toptimum = 80°C), which belongs to the
deepest branches in the phylogenetic tree within the bacterial domain.
The organism ferments glucose to acetate, CO2,
H2, and various amounts of lactate (15, 35).
Glucose degradation to pyruvate proceeds via the classical
Embden-Meyerhof pathway, and pyruvate oxidation to acetyl-CoA involves
pyruvate:ferredoxin oxidoreductase. The conversion of acetyl-CoA to
acetate and ATP is catalyzed by PTA and AK (34, 35), which
is the mechanism of acetate formation typical of bacteria (see above).
In this communication we report on the purification and
characterization of AK and PTA from the hyperthermophilic eubacterium Thermotoga maritima.
 |
MATERIALS AND METHODS |
Source of materials.
All fast protein liquid chromatography
materials and columns were from Pharmacia (Freiburg, Germany). CoA and
ATP were from Biomol (Hamburg, Germany). All other enzymes and
coenzymes were from Boehringer (Mannheim, Germany). Unless otherwise
stated, other chemicals were reagent grade and were obtained from Merck (Darmstadt, Germany). T. maritima Stamm MSB 8 (DSM
3109) was grown in a 100-liter Biostat fermentor on a medium containing
starch (5 g/liter) and yeast extract (5 g/liter) as the carbon and
energy source.
Purification of PTA.
Since the enzyme was not sensitive to
oxygen, it was purified under aerobic conditions (at 15°C). Wet cells
(30 g) were suspended in 190 ml of 50 mM Tris-HCl (pH 8.0)-5 mM
MgCl2. DNase I was added, and the cells were stirred for 10 min at room temperature. The cells were disrupted by sonication for 2 min with a Branson Sonifier in pulse mode (50% pulsing) with a
microtip and output control of 3. Cell debris and unbroken cells were
removed by centrifugation for 10 min at 48,000 × g and
4°C. The supernatant (184 ml, 4.3 mg of protein/ml), designated cell
extract, was centrifuged at 100,000 × g and 4°C for
60 min. The resulting supernatant contained >90% of the PTA activity.
The buffer used for all chromatographic steps was 20 mM Tris-HCl (pH
8.0)-2 mM MgCl2. The 100,000 × g supernatant was applied to a DEAE-Sepharose FF column (3.2 by 8 cm).
Protein was eluted at a flow rate of 4.3 ml/min with a linear gradient
of 0 to 0.4 M NaCl in buffer (400 ml). The fractions containing the
highest PTA activity (43 ml, 0.17 to 0.22 M NaCl) were pooled, diluted
fivefold with buffer, and applied to a Q-Sepharose HiLoad 16/10 column.
Protein was eluted at a flow rate of 2.5 ml/min with a linear gradient
from 0 to 0.5 M NaCl in buffer. The fractions containing the highest
PTA activity (25 ml, 0.31 to 0.36 M NaCl) were pooled, adjusted to a
final concentration of 1 M
(NH4)2SO4 by addition of 25 ml of
buffer containing 2 M (NH4)2SO4,
and applied to a phenyl-Sepharose HiLoad 26/10 column equilibrated with buffer containing 1 M
(NH4)2SO4. Protein was desorbed at
a flow rate of 8 ml/min with a decreasing gradient from 1 to 0 M
(NH4)2SO4 in buffer (300 ml). The
fractions with the highest PTA activities were pooled, diluted 40-fold
with buffer, and applied to a Resource Q column (6 ml) for
concentration of protein. Protein was eluted at a flow rate of 6 ml/min
at 0.6 M NaCl in buffer. The protein-containing fractions (2 ml) were applied to a Superdex 200 HiLoad 26/60 column equilibrated with Tris-HCl (pH 8.0)-2 mM MgCl2-0.15 M NaCl. Protein was
eluted at a flow rate of 1 ml/min. The PTA-containing fractions were
recovered between 150 and 160 ml. The fractions (10 ml) were pooled,
diluted threefold with buffer, and applied to a Mono Q column (1 by 10 cm). Protein was eluted at a flow rate of 2 ml/min with a linear gradient of 0 to 0.5 M NaCl in buffer (290 ml). The fractions containing the highest PTA activities (10 ml) were eluted between 0.31 and 0.34 M NaCl.
Purification of AK.
The oxygen-insensitive enzyme was
purified at 15°C under aerobic conditions. Frozen cells (25 g, wet
weight) were suspended in 160 ml of 50 mM Tris-HCl (pH 8.0) containing
5 mM MgCl2 and DNase I. The cells were stirred for 10 min
and then disrupted by sonication as described above for PTA. After
centrifugation (15 min) at 16,000 × g and 4°C, the
resulting supernatant (165 ml, 4.2 mg of protein/ml), designated
cell extract, was centrifuged at 100,000 × g and
4°C for 90 min.
The buffer used for all chromatographic steps was 20 mM Tris-HCl (pH
8.0) supplemented with 2 mM MgCl2. The 100,000 × g supernatant was applied to a DEAE-Sepharose FF column (3.2 by
8 cm). Protein was eluted at a flow rate of 4.3 ml/min with a linear
gradient from 0 to 0.4 M NaCl in buffer (400 ml). The fractions
containing the highest AK activity (32 ml, 0.15 to 0.19 M NaCl) were
pooled, diluted fourfold with buffer, and then applied to a Q-Sepharose HiLoad 16/10 column. Protein was eluted at a flow rate of 2.5 ml/min
with a linear gradient from 0 to 0.35 M NaCl in buffer (200 ml). The
fractions containing the highest AK activity (20 ml, 0.21 to 0.25 M
NaCl) were pooled and adjusted to a final concentration of 1 M
(NH4)2SO4 by adding 20 ml of buffer
containing 2 M (NH4)2SO4 and were
subsequently applied to a phenyl-Sepharose HiLoad 26/10 column
equilibrated with buffer containing 1 M
(NH4)2SO4. Protein was desorbed at
a flow rate of 8 ml/min with a decreasing gradient of 1 to 0 M
(NH4)2SO4 in buffer (300 ml). The
highest AK activity eluted at 0.53 to 0.47 M
(NH4)2SO4 (38 ml). The eluate was
concentrated to 0.7 ml by ultrafiltration with Centricon 30 microconcentrator (Amicon) (cutoff of 30 kDa) and then applied to a
Superdex 200 HiLoad 26/60 column equilibrated with buffer containing
0.15 M NaCl. Protein was eluted at a flow rate of 1 ml/min, and the AK activity was recovered in the fractions between 180 and 195 ml. The
fractions were pooled (15 ml), diluted fourfold with buffer, and
applied to a Mono Q column (1 by 10 cm). Protein was eluted at a flow
rate of 2 ml/min with a linear gradient from 0 to 0.25 M NaCl in buffer
(160 ml). The highest AK activity eluted at 0.2 to 0.22 M NaCl (8.8 ml).
PTA activity.
PTA activity (which catalyzes the reaction
acetyl-CoA + Pi
acetyl phosphate + CoA) was
measured at 55°C under aerobic conditions by using two different
assays. In the first assay, the phosphate-dependent release of CoA from
acetyl-CoA was monitored with Ellman's thiol reagent,
5,5'-dithiobis(2-nitrobenzoic acid) (DTNB) (38), by measuring the formation of the thiophenolate anion at 412 nm
(
412 = 13.5 mM
1 cm
1). The
assay mixture (1 ml) contained 100 mM Tris-HCl (pH 7.2), 5 mM
MgCl2, 5 mM KH2PO4, 0.1 mM DTNB,
and 0.1 mM acetyl-CoA. This assay was used (i) to routinely assay PTA
activity during the purification procedure, (ii) to determine the
apparent Km values for acetyl-CoA and phosphate
as well as the temperature and pH optima of the enzyme, (iii) to test
the thermostability of the enzyme between 80 and 100°C, and (iv) to
determine the specificity of the enzyme for other CoA esters of organic
acids. In the second assay, the formation of acetyl-CoA from acetyl
phosphate and CoA was monitored at 233 nm (
233 = 4.44 mM
1 cm
1). The assay mixture (1 ml)
contained 100 mM Tris-HCl (pH 7.2), 2 mM acetyl phosphate, and 0.15 mM
CoA. The assay was used to determine the apparent
Km values for acetyl phosphate and CoA.
AK activity.
AK activity (which catalyzes the reaction
acetyl-P + ADP
acetate + ATP) was measured under aerobic
conditions by using three different assay systems. In the first assay,
the acetate-dependent ADP formation from ATP was assayed at 55°C by
coupling the reaction with the oxidation of NADH via pyruvate kinase
and lactate dehydrogenase (33). This assay was used (i) to
routinely monitor acetate kinase activity during the purification
procedure, (ii) to determine apparent Km values
for acetate and ATP, and (iii) to test the thermostability of the
enzyme between 80 and 100°C. In the second assay, the ATP-dependent
acetyl phosphate formation from acetate was assayed at 40 to 110°C by
monitoring the formation of acetyl hydroxamate from acetyl phosphate
and hydroxylamine at 540 nm (
540 = 0.46 mM
1 cm
1) (1)). This assay was
used to determine (i) the specificity of the enzyme for organic acids,
nucleotides, and divalent cations, (ii) the apparent
Km value for Mg2+, and (iii) the
temperature and pH optima of the enzyme. In the third assay, the
formation of ATP from acetyl phosphate and ADP was monitored at 50°C
by coupling the reaction with the reduction of NADP+ via
hexokinase and glucose-6-phosphate dehydrogenase (33). This
assay was used to determine apparent Km values
of acetyl phosphate and ADP.
The pH dependence of both enzymes was measured in 100 mM Tris buffer
adjusted with HCl to pH values between 6 and 8. The temperature dependence of the enzymes was measured between 30 and 110°C. The thermostability of the purified enzymes (AK, 0.71 µg in 0.1 ml; PTA,
0.26 µg in 0.1 ml) was tested in sealed vials which were incubated at
80, 90, and 100°C up to 180 min. At various time intervals the vials
were cooled on ice and remaining enzyme activity was tested at 55°C.
The effects of salts [KCl, NaCl,
(NH4)2SO4, and NH4Cl,
each at 1 M] on thermostability were tested at 100°C.
Protein and amino acid determination.
Protein was quantified
by the method of Bradford (6) with bovine serum albumin as
the standard, and N-terminal amino acid sequences were determined as
described previously (14).
 |
RESULTS |
Purification and properties of PTA.
PTA activity in cell
extracts of T. maritima was about 0.13 U/mg (55°C).
Almost all activity was retained in the 100,000 × g supernatant, indicating that the enzyme is not an
integral membrane protein. The subsequent purification steps
involved chromatography on DEAE-Sepharose, Q-Sepharose,
phenyl-Sepharose, Superdex 200, and Mono Q. During gel filtration on
Superdex 200, significant amounts (>70%) of the enzyme were lost for
unknown reasons. After chromatography on Mono Q, the enzyme
was apparently homogeneous, since only one band was detected both on
denaturing sodium dodecyl sulfate-polyacrylamide gel electrophoresis
(SDS-PAGE) (Fig. 1) and on native PAGE
(results not shown). At this stage, the enzyme was purified about
1,500-fold (225 U/mg at 55°C) with a yield of about 2%. Thus, PTA
represents about 0.07% of the cellular protein of
Thermotoga. The purified enzyme (10 µg/ml) could be stored without significant loss of activity for several weeks at
20°C in buffer (20 mM Tris-HCl [pH 8.0], 2 mM MgCl2,
0.32 M NaCl) supplemented with glycerol (10%, vol/vol).

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FIG. 1.
Analysis of PTA from T. maritima by
SDS-PAGE at various steps of the purification procedure. Fractions with
the highest specific activities obtained after various chromatographic
steps (see Materials and Methods) were used. Protein was denatured in
SDS and separated in 14% polyacrylamide slab gels (8 by 7 cm)
(19), which were stained with Coomassie brilliant blue R
250. Lanes: 1 and 8, molecular mass standards (Sigma); 2, 100,000 × g supernatant, 12 µg of protein; 3, DEAE-Sepharose, 10 µg of protein; 4, Q-Sepharose, 10 µg of protein;
5, phenyl-Sepharose, 8 µg of protein; 6, Superdex 200, 6 µg of
protein; 7 Mono Q, 2 µg of protein. The positions of molecular mass
standards are indicated on the left.
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(i) Molecular and catalytic properties.
The apparent molecular
mass of native PTA was determined to be about 170 kDa by gel filtration
on Superdex 200. SDS-PAGE revealed only one subunit, with an apparent
molecular mass of 34 kDa, suggesting that the native enzyme
has a homotetrameric (
4) structure. PTA was
colorless and exhibited a UV-visible spectrum similar to that of bovine
serum albumin, indicating the absence of a chromophoric prosthetic
group. The N-terminal amino acid sequence of the 34-kDa subunit
(MFLEKLVEMAYGKGKKLAVAAANDDHVIEAVYRAWRERV)
showed high homology (39% identity and 49% similarity) to phosphate
butyryltransferases from Clostridium acetobutylicum ATCC 824 (43) and NCIMB 8052 (27) rather than to PTAs from
other bacteria and the archaeon M. thermophila. The kinetic
constants of purified PTA were determined for both directions of
the reaction (acetyl-CoA + Pi
acetyl phosphate + CoA). The apparent (Km values
for acetyl-CoA, Pi, acetyl phosphate, and CoA, obtained
from linear Lineweaver-Burk plots, were 23, 110, 235, and 30 µM, respectively; the apparent Vmax
values (at 55°C) were 260 U/mg (acetyl phosphate formation) and
570 U/mg (acetyl-CoA formation). The pH optimum for enzyme activity was
at pH 6.5; about 80 and 60% of the activity were found at pH 6.0 and
8.0, respectively. In addition to acetyl-CoA (100%), PTA accepted
propionyl-CoA (60%) and butyryl-CoA (33%) as substrates. KCl (up to
400 mM) and NaCl (up to 100 mM) did not affect PTA activity, and
(NH4)2SO4 (300 mM) inhibited PTA activity by 65%. Both NH4Cl (200 mM), and
MgCl2 (50 mM) slightly increased PTA activity to about
140%. KH2PO4 at 20 mM, which inhibits M. thermophila PTA, did not affect T. maritima PTA.
(ii) Temperature optimum and stability.
The temperature
dependence of PTA is shown in Fig. 2. The
enzyme showed little activity at 40°C, and its activity increased rapidly above 55°C. The temperature optimum was at 90°C. From the
linear part of the Arrhenius plot between 40 and 80°C, an activation
energy of 70.3 kJ/mol was calculated. The temperature stability of the
purified enzyme was tested between 80 and 100°C in 20 mM Tris-HCl (pH
8.0)-320 mM NaCl. At 80°C the enzyme did not lose activity after
incubation for 2 h; 30% and 60% of the activity were lost after
incubation for 2 h at 90 and 100°C, respectively. Various
salts [NaH2PO4, KCl, NaCl, NH4Cl,
(NH4)2SO4,
KH2PO4] at 1 M did not significantly stabilize
PTA against heat inactivation.

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FIG. 2.
Effect of temperature on the specific activity of PTA
from T. maritima. (A) Temperature dependence of the
specific activity. (B) Arrhenius plot of the same data. Enzyme activity
was measured in the direction of acetyl phosphate formation from
acetyl-CoA (see Materials and Methods). The assay mixture contained
0.087 µg of protein. T, temperature.
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Purification and properties of AK.
AK activity in cell
extracts (5.7 U/mg at 55°C), which was not sensitive to oxygen, was
purified under aerobic conditions. The purification steps used were the
same as described above for the purification of PTA. After the last
chromatographic step on Mono Q, the enzyme appeared homogeneous;
only one protein band was detected on SDS-PAGE (Fig.
3). At this stage, the enzyme was purified 215-fold (1,185 U/mg at 55°C) with a yield of 9%,
indicating that AK represents 0.5% of the cellular T. maritima protein. Purified AK could be stored in 20 mM Tris-HCl
(pH 8.0)-2 mM MgCl2-210 mM NaCl at
20°C for
several weeks without loss of activity.

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FIG. 3.
Analysis of AK from T. maritima by
SDS-PAGE at various steps of the purification procedure. Fractions with
the highest specific activities obtained after various chromatographic
steps (see Materials and Methods) were used. Protein was denatured in
SDS and separated in 14% polyacrylamide slab gels (8 by 7 cm)
(19), which were stained with Coomassie brilliant blue R
250. Lanes: 1 and 8, molecular mass standards (Sigma); 2, 100,000 × g supernatant, 12 µg of protein; 3, DEAE-Sepharose, 10 µg of protein; 4, Q-Sepharose, 7 µg of protein;
5, phenyl-Sepharose, 5 µg of protein; 6, Superdex 200, 3 µg of
protein; 7, Mono Q, 2 µg of protein. The positions of molecular mass
standards are indicated on the left.
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(i) Molecular and catalytic properties.
The apparent molecular
mass of native AK, as determined by gel filtration on Superdex 200, was
about 90 kDa. SDS-PAGE revealed the presence of only one subunit with
apparent molecular mass of 44 kDa, indicating a homodimer
(
2) structure. The N-terminal amino acid sequence of
the 44-kDa subunit was determined. This sequence,
MRVLVINSGSSS, showed high homology to that of all
known AK from bacteria and the archaeon M. thermophila. The colorless AK showed UV-visible spectrum similar
to that of bovine serum albumin, indicating the absence of a
chromophoric prosthetic group. The kinetic constants of purified AK
were determined for both directions of the reaction (acetyl
phosphate + ADP
acetate + ATP). The apparent
Km values for acetyl phosphate, ADP, acetate, and ATP, obtained from linear Lineweaver-Burk plots, were 0.44, 3, 40, and 0.7 mM, respectively. The apparent Vmax
values were 2,600 U/mg at 50°C (acetate formation) and 1,800 U/mg at
55°C (acetyl phosphate formation). The pH optimum of AK was at pH
7.0. About 50% of the activity was found at pH 6 and 80% at pH 8.5. The enzyme phosphorylated propionate at 54% of the rate for acetate (100%; 530 U/mg at 50°C); butyrate, isobutyrate, valerate, and isovalerate, were not accepted. Besides ATP (100%; 580 U/mg at 50°C), the purine nucleotides GTP (100%) and ITP (163%) and the pyrimidine nucleotides UTP (56%) and CTP (21%) served as phosphoryl donors for acetate phosphorylation. The reaction was dependent on
divalent cations. Mn2+ (180%) and Mg2+ (100%;
1,300 U/mg) were the most effective and could partially be replaced by
Co2+ (30%), Zn2+ (15%), and Ca2+
(12%) in preference to Ni2+ (4%) and Cu2+
(<4%). AK activity was monitored by increasing the MgCl2
concentrations at a constant ATP concentration of 10 mM. The
highest activities were found at 10 mM MgCl2, indicating an
optimal Mg2+/ATP ratio of 1:1.
(ii) Temperature optimum and thermostability.
The temperature
dependence of AK activity, measured between 30 and 110°C, showed an
optimum at 90°C. From the linear part of the Arrhenius plot between
55 and 90°C, an activation energy of 21 kJ/mol was calculated. The
thermostability of AK was tested between 80 and 100°C in 20 mM
Tris-HCl (pH 8.0)-150 mM NaCl. At 80°C, AK did not lose activity
upon incubation for 180 min. At 90°C, 30% of the activity was lost
after 180 min and an almost complete loss (>90%) was observed
after incubation at 100°C for about 60 min. The various salts
[NaCl, KCl, (NH4)Cl, and
(NH4)2SO4)] were tested at 1 M for
their ability to protect AK against heat inactivation at 100°C. In
the presence of (NH4)2SO4, which
was the most effective, the enzyme did not lose activity for 180 min. KCl and NaCl also stabilized enzyme activity for about 60 min. A
further increase of incubation time to 180 min resulted in loss of 75%
of the activity (Fig. 4).
NH4Cl had no effect on thermostability.

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FIG. 4.
Effect of various salts on the thermostability of AK
from T. maritima at 100°C. The 0.1-ml incubation
mixtures contained 20 mM Tris-HCl (pH 8.0), 150 mM NaCl, and 0.36 µg
of enzyme. Salts (1 M) were included as indicated. At the times
indicated, the remaining enzyme activity was measured at 55°C in the
direction of acetyl phosphate formation (pyruvate kinase/lactate
dehydrogenase assay).
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 |
DISCUSSION |
In this communication we reported the purification and
properties of PTA and AK from the hyperthermophilic eubacterium
T. maritima. This is the first report on the
characterisation of these "classical" acetate-forming enzymes from
a hyperthermophilic ancestral organism.
PTA of T. maritima had a native molecular mass of about
170 kDa and was composed of a single subunit of about 35 kDa,
suggesting a homotetrameric structure. PTAs had been isolated
from various eubacteria and the archaeon M. thermophila; their molecular properties and kinetic
constants are given in Table
1. All PTAs that have been analyzed for
this property, consist of a single subunit with relative molecular
masses ranging from 20 kDa (C. thermoaceticum) to 80 kDa
(E. coli). Comparison with molecular masses of the
native enzymes indicate monomeric, dimeric, and tetrameric structures. Like the PTA from Clostridium thermoaceticum, the
Thermotoga enzyme is apparently homotetrameric, but
it has twice the molecular mass of subunits and native enzyme.
PTA from Thermotoga exhibits the lowest apparent
Km values of all substrates (Table 1) and
one of the highest Vmax values (approximately 1,000 to 2,000 U/mg at 90°C, taking into account the
temperature dependence of enzyme activity). Like the PTA from other organisms (e.g., from Bacillus subtilis,
Clostridium kluyveri, and Rhodopseudomonas
palustris), the Thermotoga enzyme used
propionyl-CoA (60%) and butyryl-CoA (30%) as substrates in addition
to acetyl-CoA (100%). In contrast to PTAs from bacteria and from the
archaeon M. thermophila, which are stimulated by KCl
and inhibited by NaCl, these salts did not affect PTA from
Thermotoga (for a comparison of specific activities and of
metal effects of various PTAs, see reference 21).
The N-terminal amino acid sequence of Thermotoga PTA shows a
higher homology to the corresponding sequences of phosphate
butyryltransferases from Clostridium acetobutylicum.
However, alignments of complete amino acid sequences of PTAs from
Escherichia coli, Clostridium acetobutylicum,
Bacillus subtilis, Paracoccus denitrificans,
Methanosarcina thermophila, Mycoplasma
genitalium, and Mycoplasma capricolum as deduced
from available gene (pta) sequences in databases
(5, 47) showed that they had a high overall
homology to each other, ranging from 40 to 60% identity and 60 to 70%
similarity. A phylogenetic tree of sequenced PTAs is given by Zhu et
al. (47) and Rasche et al. (29). Since all amino
acid sequences exhibited a rather poor N-terminal homology
(5), only the comparison of the overall amino acid
sequence of Thermotoga PTA will give conclusive information about homology to other PTAs. This will have to await the completion of
the entire sequence of the PTA gene of thermophile. Sequencing of
the complete T. maritima genome is in progress.
PTA from T. maritima showed the highest temperatur
optimum (about 90°C) and the highest thermostability of all PTAs
analyzed. The enzyme did not lose activity upon incubation for 2 h
at 80°C and lost only 30% of its activity upon incubation at 90°C
(2 h). For comparison, PTA from the moderate thermophile
M. thermophila had a temperature optimum at about
40°C and was completely inactivated after incubation for 5 min at
80°C (21). PTA from Clostridium thermoaceticum
showed a temperature optimum of 75°C (11).
AK of T. maritima had a native molecular mass of 90 kDa
and was composed of a single subunit of 44 kDa, indicating a
homodimeric structure. As shown in Table
2, a homodimeric structure is typical of
most AKs from eubacteria and the archaeon M. thermophila. Exceptions are the AKs of Clostridium
thermoaceticum and of Bacillus stearothermophilus, which have been reported to be monomeric and homotetrameric enzymes, respectively. Furthermore, comparison of the N-terminal amino acid sequence of Thermotoga AK (MRVLVIN S
GSSS) revealed a high degree of homology to AK
from eubacteria and the archaeon M. thermophila, with
the underlined amino acids being almost completely conserved (>80%
identity within the first 15 N-terminal amino acids). Alignments of
N-terminal and complete amino acid sequences of AKs, including
those of, e.g., Bacillus subtilis, Escherichia
coli, Mycoplasma capricolum, Mycoplasma genitalum, Clostridium acetobutylicum,
Haemophilus influenzae, and M. thermophila, are given in references 5, 9, and
47 (for a phylogenetic tree of sequenced AKs,
see reference 47).
The kinetic properties of Thermotoga AK were very similar to
the enzymes of eubacteria and the archaeon M. thermophila. As shown in Table 2, the apparent
Km values for substrates vary somewhat but all
AKs have high values for acetate independent of whether the enzymes
catalyze the activation (as, e.g., in M. thermophila)
or the production of acetate in the metabolism. The Thermotoga enzyme showed a very high specific activity up to
about 6,000 U/mg at 90°C (2,600 U/mg at 50°C), taking into account
the temperature dependence of the enzyme.
Like all known AKs, the Thermotoga enzyme requires divalent
cations for activity; Mg2+ and Mn2+ are the
most effective. The enzyme has an optimal Mg2+/ATP ratio of
1:1, suggesting that Mg2+ is required only to complex ATP
rather than to have additional effects on enzyme function or stability.
A 1:1 ratio has also been determined for the enzymes of
Escherichia coli, Salmonella typhimurium, and
M. thermophila (1, 13). For AK from C. acetobutylicum, an optimal Mg2+/ATP ratio of 2 has
been reported (10). Furthermore, the substrate specificities
of AK with respect to the acids other than acetate and nucleotides
other than ATP were similar to those of most AKs; for example, like the
AK from M. thermophila (1), the
Thermotoga enzyme phosphorylated propionate (54%) in
addition to acetate (100%) and used various purine and pyrimidine
nucleotides (GTP, ITP, UTP, CTP) effectively as phosphoryl donors for
acetate phosphorylation.
AK showed a temperature optimum at 90°C, which is the highest value
of all AKs analyzed. Furthermore, the enzyme exhibited an extreme
thermostability, which was increased by the addition of salts. In
the presence 1 M (NH4)2SO4,
the enzyme did not lose activity upon incubation for 180 min at
100°C. AK from the moderate thermophile M. thermophila was almost completely inactivated after a 15-min
incubation at 75°C. An increase of thermostability by salts has also
been demonstrated for other enzymes from hyperthermophiles, e.g.,
Pyrococcus furiosus, Methanopyrus kandleri, and
Archaeoglobus fulgidus (7, 14, 17; for
reviews, see references 2 and 20).
In summary, both PTA and AK of the hyperthermophile T. maritima showed similar molecular and catalytic properties to
those of their mesophilic and moderately thermophilic
counterparts. They differ, however, in their extremely high
temperature optimum and their high thermostability, which is in
accordance with the hyperthermophilic nature of Thermotoga.
In this respect, both PTA and AK may serve as model enzymes for
analyses of the reasons for the thermostability of proteins in general.
Cloning of the genes encoding both AK and PTA from
Thermotoga and their expression in E. coli is in
progress with the aim of crystallizing the proteins. So far,
crystallization of the AK from M. thermophila and a
prediction of its folding have been reported (9).
 |
ACKNOWLEDGMENTS |
This work was supported by grants from the European Union
(Biotechnology of Extremophiles) and the Fonds der Chemischen Industrie.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Institut
für Allgemeine Mikrobiologie,
Christian-Albrechts-Universität Kiel, Am Botanischen Garten 1-9, D-24118 Kiel, Germany. Phone: 49-431-880-4328. Fax: 49-431-880-2194. E-mail: peter.schoenheit{at}ifam.uni-kiel.de.
 |
REFERENCES |
| 1.
|
Aceti, D. J., and J. G. Ferry.
1988.
Purification and characterization of acetate kinase from acetate-grown Methanosarcina thermophila. Evidence for regulation of synthesis.
J. Biol. Chem.
263:15444-15448[Abstract/Free Full Text].
|
| 2.
|
Adams, M. W. W. (ed.).
1996.
Enzymes and proteins from hyperthermophilic microorganisms.
Adv. Protein Chem.
48:1-509[Medline].
|
| 3.
|
Bergmeyer, H. U.,
G. Holz,
H. Klotzsch, and G. Lang.
1963.
Phosphotransacetylase aus Clostridium kluyveri. Züchtung des Bacteriums, Isolierung, Kristallisation und Eigenschaften des Enzymes.
Biochem. Z.
338:114-121[Medline].
|
| 4.
|
Bowmann, C. M.,
R. O. Valdez, and J. S. Nishimura.
1976.
Acetate kinase from Veillonella alcalescens. Regulations of enzyme activity by succinate and substrates.
J. Biol. Chem.
251:3117-3121[Abstract/Free Full Text].
|
| 5.
|
Boynton, Z. L.,
G. N. Benett, and F. B. Rudolph.
1996.
Cloning, sequencing, and expression of genes encoding phosphotransacetylase and acetate kinase from Clostridium acetobutylicum ATCC 824.
Appl. Environ. Microbiol.
62:2758-2766[Abstract].
|
| 6.
|
Bradford, M. M.
1976.
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
Anal. Biochem.
72:248-254[Medline].
|
| 7.
|
Breitung, J.,
R. A. Schmitz,
K. O. Stetter, and R. K. Thauer.
1991.
N5, N10, -Methenyltetrahydromethanopterin cyclohydrolase from the extreme thermophile Methanopyrus kandleri: increase of catalytical efficiency (Kcat/Km) and thermostability in the presence of salts.
Arch. Microbiol.
156:517-524.
|
| 8.
|
Brown, T. D. K.,
M. C. Jones-Mortimer, and H. L. Kornberg.
1977.
The enzymic interconversion of acetate and acetyl-coenzyme A in Escherichia coli.
J. Gen. Microbiol.
102:327-336[Medline].
|
| 9.
|
Buss, K. A.,
C. Ingram-Smith,
J. G. Ferry,
D. A. Sanders, and M. S. Hasson.
1997.
Crystallization of acetate kinase from Methanosarcina thermophila and prediction of its fold.
Protein Sci.
6:2659-2662[Abstract].
|
| 10.
|
Diez-Gonzales, F.,
J. B. Russell, and J. B. Hunter.
1997.
The acetate kinase of Clostridium acetobutylicum strain P262.
Arch. Microbiol.
166:418-420.
|
| 11.
|
Drake, H. L.,
S. I. Hu, and H. G. Wood.
1981.
Purification of five components from Clostridium thermoaceticum with catalyze synthesis of acetate from pyruvate and methyltetrahydrofolate.
J. Biol. Chem.
256:11137-11144[Abstract/Free Full Text].
|
| 12.
|
Ferry, J. G.
1997.
Enzymology of the fermentation of acetate to methane by Methanosarcina thermophila.
Biofactors
6:25-35[Medline].
|
| 13.
|
Fox, D. K., and S. Roseman.
1986.
Isolation and characterization of homogeneous acetate kinase from Salmonella typhimurium and Escherichia coli.
J. Biol. Chem.
261:13487-13497[Abstract/Free Full Text].
|
| 14.
|
Glasemacher, J.,
A.-K. Bock,
R. Schmidt, and P. Schönheit.
1997.
Purification and properties of acetyl-CoA synthetase (ADP-forming), an archaeal enzyme of acetate formation and ATP synthesis from the hyperthermophile Pyrococcus furiosus.
Eur. J. Biochem.
244:561-567[Medline].
|
| 15.
|
Huber, R.,
T. A. Langworthy,
H. König,
M. Thomm,
C. R. Woese,
U. B. Sleytr, and K. O. Stetter.
1986.
Thermotoga maritima sp. nov. represents a new genus of unique extremely thermophilic eubacteria growing up to 90°C.
Arch. Microbiol.
144:324-333.
|
| 16.
|
Kahane, I., and A. Muhlrad.
1979.
Purification and properties of acetate kinase from Acholeplasma laidlawii.
J. Bacteriol.
137:764-772[Abstract/Free Full Text].
|
| 17.
|
Kunow, J.,
D. Linder, and R. K. Thauer.
1995.
Pyruvate:ferredoxin oxidoreductase from the sulfate reducing Archaeoglobus fulgidus: molecular composition, catalytical properties, and sequence alignments.
Arch. Microbiol.
163:21-28[Medline].
|
| 18.
|
Kryptopoulos, S. A., and D. P. N. Satchell.
1973.
Kinetic studies with phosphotransacetylase. V. The mechanism of activation by univalent cations.
Biochim. Biophys. Acta
321:126-142[Medline].
|
| 19.
|
Laemmli, U. K.
1970.
Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
Nature
227:680-685[Medline].
|
| 20.
|
Leuschner, C., and G. Antranikian.
1995.
Heat stable enzymes from extremely thermophilic and hyperthermophilic microorganisms.
World J. Microbiol. Biotechnol.
11:95-114.
|
| 21.
|
Lundie, L. L., Jr., and J. G. Ferry.
1989.
Activation of acetate by Methanosarcina thermophila. Purification and characterization of phosphotransacetylase.
J. Biol. Chem.
264:18392-18396[Abstract/Free Full Text].
|
| 22.
|
McClearly, W. R.,
J. B. Stock, and A. J. Ninfa.
1993.
Is acetyl phosphate a global signal in Escherichia coli?
J. Bacteriol.
175:2793-2798[Free Full Text].
|
| 23.
|
Müller, M.
1988.
Energy metabolism without mitochondria.
Annu. Rev. Microbiol.
42:465-488[Medline].
|
| 24.
|
Nakijima, H.,
K. Suzuki, and K. Imahori.
1978.
Purification and properties of acetate kinase from Bacillus stearothermophilus.
J. Biochem.
84:193-203[Abstract/Free Full Text].
|
| 25.
|
Nishimura, J. S., and M. J. Griffith.
1981.
Acetate kinase from Veillonella alcalescens.
Methods Enzymol.
71:311-316.
|
| 26.
|
Nojiri, T.,
F. Tanaka, and I. Nakayama.
1971.
Purification and properties of phosphotransacetylase from Lactobacillus fermenti.
J. Biochem.
69:789-801[Abstract/Free Full Text].
|
| 27.
|
Oultram, J. D.,
I. D. Burr,
M. J. Elmore, and N. P. Minton.
1993.
Cloning and sequence analysis of the genes encoding phosphotransbutyrylase and butyrate kinase from Clostridium acetobutylicum NCIMB 8052.
Gene
131:107-112[Medline].
|
| 28.
|
Rado, T. A., and J. A. Hoch.
1973.
Phosphotransacetylase from Bacillus subtilis: purification and physiological studies.
Biochim. Biophys. Acta
321:114-125[Medline].
|
| 29.
|
Rasche, M. E.,
K. S. Smith, and J. G. Ferry.
1997.
Identification of cysteine and arginine residues essential for phosphotransacetylase from Methanosarcina thermophila.
J. Bacteriol.
179:7712-7717[Abstract/Free Full Text].
|
| 30.
|
Reeves, R. E.,
L. G. Warren,
B. Susskind, and H. S. Lo.
1977.
An energy-conserving pyruvate-to-acetate pathway in Entamoeba histolytica: pyruvate synthase and a new acetate thiokinase.
J. Biol. Chem.
252:726-731[Abstract/Free Full Text].
|
| 31.
|
Robinson, J. R., and R. D. Sagers.
1972.
Phosphotransacetylase from Clostridium acidiurici.
J. Bacteriol.
112:465-473[Abstract/Free Full Text].
|
| 32.
|
Schaupp, A., and L. G. Ljungdahl.
1974.
Purification and properties of acetate kinase from Clostridium thermoaceticum.
Arch. Microbiol.
100:121-129[Medline].
|
| 33.
|
Schäfer, T.,
M. Selig, and P. Schönheit.
1993.
Acetyl-CoA synthetase (ADP-forming) in archaea, a novel enzyme involved in acetate formation and ATP synthesis.
Arch. Microbiol.
159:72-83.
|
| 34.
|
Schönheit, P., and T. Schäfer.
1995.
Metabolism of hyperthermophiles.
World J. Microbiol. Biotechnol.
11:26-57.
|
| 35.
|
Schröder, C.,
M. Selig, and P. Schönheit.
1994.
Glucose fermentation to acetate, CO2 and H2 in the anaerobic hyperthermophilic eubacterium Thermotoga maritima: involvement of the Embden-Meyerhof pathway.
Arch. Microbiol.
161:460-470.
|
| 36.
|
Shieh, J., and W. B. Whitman.
1987.
Pathway of acetate assimilation in autotrophic and heterotrophic methanococci.
J. Bacteriol.
169:5327-5329[Abstract/Free Full Text].
|
| 37.
|
Shimizu, M.,
T. Suzuki,
K.-Y. Kameda, and Y. Abiko.
1969.
Phosphotransacetylase of Escherichia coli B, purification and properties.
Biochim. Biophys. Acta
191:550-558[Medline].
|
| 38.
|
Srere, P. A.,
H. Brazil, and L. Gonen.
1963.
The citrate condensing enzyme of pigeon breast muscle and moth flight muscle.
Acta Chem. Scand.
17:129-134.
|
| 39.
|
Stetter, K. O.
1996.
Hyperthermophilic procaryotes.
FEMS Microbiol. Rev.
18:149-158.
|
| 40.
|
Thauer, R. K.,
D. Möller-Zinkhan, and A. Spormann.
1989.
Biochemistry of acetate catabolism in anaerobic chemotrophic bacteria.
Annu. Rev. Microbiol.
43:43-67[Medline].
|
| 41.
|
Vigenschow, H.,
H.-M. Schwarm, and K. Knobloch.
1986.
Purification and properties of an acetate kinase from Rhodopseudomonas palustris.
Biol. Chem. Hoppe-Seyler
367:951-956[Medline].
|
| 42.
|
Vigenschow, H.,
H.-M. Schwarm, and K. Knobloch.
1986.
Purification and properties of a phosphotransacetylase from Rhodopseudomonas palustris.
Biol. Chem. Hoppe-Seyler
367:957-962[Medline].
|
| 43.
|
Walter, K. A.,
R. V. Nair,
J. W. Cary,
G. N. Bennet, and E. T. Papoutsakis.
1994.
Sequence and arrangement of two genes of the butyrate-synthesis pathway of Clostridium acetobutylicum ATCC 824.
Gene
134:101-111.
|
| 44.
|
Wanner, B. L., and M. R. Wilmes-Riesenberg.
1992.
Involvement of phosphotransacetylase, acetate kinase, and acetyl phosphate synthesis in control of the phosphate regulon in Escherichia coli.
J. Bacteriol.
174:2124-2130[Abstract/Free Full Text].
|
| 45.
|
Whiteley, H. R., and R. A. Pelroy.
1972.
Purification and properties of phosphotransacetylase from Veillonella alcalescens.
J. Biol. Chem.
247:1911-1917[Abstract/Free Full Text].
|
| 46.
|
Yamamoto-Otake, H.,
A. Matsuyama, and E. Nakano.
1990.
Cloning of a gene coding for phosphotransacetylase from Escherichia coli.
Appl. Microbiol. Biotechnol.
33:680-682[Medline].
|
| 47.
|
Zhu, P.-P., and A. Peterkofsky.
1996.
Sequence and organization of genes encoding enzymes involved in pyruvate metabolism in Mycoplasma capricolum.
Protein Sci.
5:1719-1736[Abstract].
|
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