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Journal of Bacteriology, April 1999, p. 2485-2491, Vol. 181, No. 8
Department of Oral Microbiology,
Received 20 October 1998/Accepted 10 February 1999
Although we are currently unaware of its biological function, the
fibril-like surface structure is a prominent characteristic of the
rough (Rg) genotype of the gram-positive periodontal pathogen Peptostreptococcus micros. The smooth (Sm) type of this
species as well as the smooth variant of the Rg type (RgSm)
lack these structures on their surface. A fibril-specific serum, as
determined by immunogold electron microscopy, was obtained through
adsorption of a rabbit anti-Rg type serum with excess bacteria of the
RgSm type. This serum recognized a 42-kDa protein, which
was subjected to N-terminal sequencing. Both clones of a By currently accepted criteria, the
gram-positive anaerobic bacterium Peptostreptococcus micros
is one of the causative agents of periodontal disease (15,
33). Several potential virulence factors of P. micros
have been reported, such as adherence to gingival epithelial cells
(7), expression of immunoglobulin G Fc-binding proteins
(14), production of hydrogen sulfide from glutathione
(2), and production of hyaluronidase (34).
Two types of P. micros have been described, i.e., the smooth
(Sm) type and the rough (Rg) type (37). Based on 16S RNA
analysis and pyrolysis mass spectrometry, these two types are now
considered distinct genotypes (20). Both types can be
isolated from subgingival plaque samples from subjects with periodontal
disease (38). One of the prominent characteristics of the Rg
type is the expression of large fibril-like surface appendages. These
auto-aggregating structures often exceed 4 µm in length. Thus far,
P. micros is the only gram-positive anaerobic coccus on
which such structures have been observed. We can only speculate on
their biological function, but they do not seem to be required for
adherence to epithelial cells (19) or to other bacteria
(18). Remarkably, when grown in broth culture, the Rg type
readily converts to a smooth variant (RgSm variant), which
lacks the fibril-like structures (20). Since such variants
have never been isolated from periodontitis patients (18),
the correct assembly of the fibril-like structures probably serves some
essential function in vivo.
Characterization of the constituents of these structures may help
elucidate their biological function. However, at present their
composition is unknown. All our attempts to purify the structures were
unsuccessful. In the present study we raised antibodies against the Rg
type and absorbed the obtained serum with the RgSm variants
to generate a fibril-specific serum. This serum was then used to
identify an antigenic constituent of the fibril-like structure of
P. micros.
Microorganisms and culture methods.
The origin and main
characteristics of all strains and plasmids used in this study are
listed in Table 1. P. micros
strains were routinely cultured on blood agar plates (Oxoid no. 2 agar, supplemented with 5% defibrinated horse blood, hemin [5 mg/ml], and
menadione [1 mg/ml]) for 4 days in 80% N2-10%
CO2-10% H2 at 37°C. These strains were
identified by anaerobic growth, Gram staining, and ATB-32A kits
(Analytab Products, Montalieu-Vercieu, France). RgSm
variants of all of the Rg strains were obtained after four passages in
Schaedler broth (BBL Microbiology Systems, Cockeysville, Md.) and
subsequent subculturing on blood agar plates (20).
Escherichia coli strains were grown under aerobic conditions
at 37°C, except for E. coli BM25.8, which was grown at
31°C on Luria-Bertani (LB) agar containing kanamycin (50 µg/ml) and
chloramphenicol (34 µg/ml). E. coli DH5 Rabbit antisera.
Male chinchilla rabbits (2 to 3 kg) were
immunized with P. micros HG 1259 (Rg morphotype). A
suspension of bacteria in phosphate-buffered saline (PBS) (ca.
1010 bacteria/ml) was administered intravenously eight
times, every other day in increasing amounts (0.25-ml steps). One week
after the last injection, a 2.0-ml booster was administered
intravenously. The anti-Rg type serum, prepared from blood obtained by
cardiac puncture, was inactivated by incubation at 56°C for 30 min
and stored at Electron microscopy (EM).
P. micros strains were
harvested from blood agar and washed once in distilled water. Grids
coated with bacteria were washed once in 0.1 M PBS-0.15 M glycine-1%
bovine serum albumin and subsequently incubated for 30 min with the
appropriate sera diluted in PBS-glycine-bovine serum albumin. The
samples were washed twice in PBS-glycine and incubated with a 1:20
dilution in PBS-glycine of goat anti-rabbit immunoglobulin G-colloidal
gold (particle size, 10 nm; Aurodye, Hertogenbosch, The Netherlands)
for 30 min at room temperature. After two more washes, the samples were
examined with a model EM301 electron microscope (Philips, Eindhoven,
The Netherlands).
SDS-PAGE.
Whole-cell protein patterns were determined by
standard protein polyacrylamide gel electrophoresis (PAGE)
(22). Cells harvested from blood agar were washed with PBS,
resuspended in 0.5 M Tris-HCl (pH 6.8), and diluted 1:1 in sample
buffer (4% sodium dodecyl sulfate [SDS], 2% 2-mercaptoethanol, 20%
glycerol, 125 mM Tris-HCl [pH 6.8], bromphenol blue [0.1 mg/ml]).
The samples were heated for 10 min at 100°C, and the insoluble debris
was removed by centrifugation at 14,000 × g for 10 min. Electrophoresis was performed on a 1.5-mm-thick, 10% homogeneous
polyacrylamide gel at 100 V for 2 h, and the proteins were stained
with Coomassie brilliant blue R-250 (Bio-Rad Laboratories, Hercules,
Calif.).
Immunoblotting.
Whole-cell proteins were separated by
SDS-PAGE (10% polyacrylamide) and transferred to a nitrocellulose
membrane (pore size, 0.45 mm; Schleicher & Schuell, Dassel, Germany) by
Western blotting (35). After blotting at 100 V for 1 h,
the nitrocellulose sheets were incubated for 1 h at room
temperature with blocking buffer TTBS (100 mM Tris-HCl [pH
7.5]-0.9% NaCl supplemented with 0.1% [vol/vol] Tween 20). The
blots were incubated overnight with sera (1:100 to 1:500 in TTBS).
Subsequently, they were washed four times with TTBS, incubated for
1 h with goat anti-rabbit immunoglobulin G-horseradish peroxidase
(1:1,500 in TTBS; Nordic, Tilburg, The Netherlands), and washed again
four times in TTBS. Antibody-binding antigens were visualized with
4-chloro-1-naphtol (Bio-Rad) and H2O2.
N-terminal amino acid sequencing.
SDS-soluble proteins of
P. micros HG 1259 were separated on an SDS-10%
polyacrylamide gel. The proteins were subsequently transferred to
methanol-prewetted polyvinylidene difluoride membrane (Immobilon-P;
Millipore Corp., Bedford, United Kingdom), by semidry blotting with 10 mM CAPS (3-cyclo-hexyl-amino-1-propanesulfonic acid) blotting buffer
containing methanol (10% [vol/vol]) at pH 11. Afterwards, proteins
on the membrane were visualized by Coomassie brilliant blue R-250
(Bio-Rad) staining, and the protein band of interest was excised and
subjected to N-terminal sequence analysis by Edman degradation.
DNA isolation.
All P. micros strains indicated in
Table 1 were harvested from blood agar plates, washed twice in PBS, and
resuspended in 25 mM Tris-HCl-10 mM EDTA-50 mM glucose (pH 8.0). The
bacteria were disrupted by four cycles of freeze-thawing, followed by
incubation for 1 h at 37°C with lysozyme (10 mg/ml) and
proteinase K (1 mg/ml) and an incubation with SDS (4%) for 1 h at
56°C. After two phenol-chloroform-isoamyl alcohol extractions and two
chloroform-isoamyl alcohol extractions, sodium acetate (0.3 M, pH 7.6)
was added before ethanol precipitation. The DNA was air dried and
dissolved in 10 mM Tris-1 mM EDTA (pH 8.0) containing RNase (20 mg/ml).
Construction of an expression library.
Chromosomal DNA of
P. micros HG 1259 was partially digested with
Tsp509I (New England Biolabs, Inc., Beverly, Mass.) at
65°C. This partial digest was size fractionated on a sucrose gradient (28). DNA fragments of 1,000 to 3,000 nucleotides (nt) were used for ligation into EcoRI-predigested Isolation of fib clones.
The fibA analysis in P. micros types.
Genomic DNA that was isolated from P. micros Sm and Rg
strains (Table 1) was used for PCR amplification with
fibA-specific primers. Primers used for this analysis, i.e.,
Fib-FN (TAATCGTTGGAGAGGCTAAGG) and Fib-RN
(TGCCTATCTTTTTCGAATTC), were designed to amplify the N-terminal part of the fibA gene since no sequences
homologous to this part were found in other bacteria by a BLAST
homology search. The fibA PCR product of HG 1259 was
subsequently labeled with DIG-HighPrime (Boehringer Mannheim). This
probe was used for dot blotting on genomic DNA of Sm and Rg genotypes
of P. micros, according to the manufacturer's instructions.
Nucleotide sequence accession number.
The DNA sequence of
fibA, orf2, and orf3 of P. micros HG 1259 (Rg type) has been deposited in the GenBank
database under accession no. AF097909.
Isolation of an antigen of the fibril-like structures.
A
previous study provided strong indications that the fibril-like
appendages of the Rg type of P. micros are proteinaceous structures (19). To isolate proteins that constitute these
structures an anti-Rg type serum was adsorbed with Sm-type and
RgSm-type bacteria. Serum adsorbed with the Sm type (ATCC
33270) strongly recognized the fibril-like structures as well as some
other surface structures on the Rg-type cells as determined by
immunogold EM (Fig. 1A). Adsorption with
the RgSm variant of HG 1259 increased the specificity for
the fibril-like structures, although there still was substantial
labeling at the cell-to-cell junctions (Fig. 1B). On
RgSm-type bacteria, gold particles were observed at the
intersections of adjacent bacterial cells and on structures resembling
fibril-like structures that were not attached to cells (Fig. 1C). No
gold particles bound to Sm-type bacteria when the Sm type-adsorbed or
RgSm type-adsorbed anti-Rg type serum was used (data not
shown). These findings indicate that the adsorption of the anti-Rg type
serum with the RgSm type had effectively removed all common
antibodies, leaving only antibodies recognizing Rg type-specific
structures.
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.
Cloning of fibA, Encoding an Immunogenic
Subunit of the Fibril-Like Surface Structure of
Peptostreptococcus micros

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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
TriplEx
expression library that were selected by immunoscreening with the
fibril-specific serum contained an open reading frame, designated
fibA, encoding a 393-amino-acid protein (FibA). The
15-residue N-terminal amino acid sequence of the 42-kDa antigen was
present at positions 39 to 53 in FibA; from this we conclude that the
mature FibA protein contains 355 amino acids, resulting in a predicted
molecular mass of 41,368 Da. The putative 38-residue signal sequence of
FibA strongly resembles other gram-positive secretion signal sequences. The C termini of FibA and two open reading frames directly upstream and
downstream of fibA exhibited significant sequence homology to the C termini of a group of secreted and surface-located proteins of
other gram-positive cocci that are all presumably involved in anchoring
of the protein to carbohydrate structures. We conclude that FibA is a
secreted and surface-located protein and as such is part of the
fibril-like structures.
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
was routinely
cultured on LB agar, E. coli XL-1-Blue was cultured on LB
agar with addition of tetracycline (15 µg/ml). When appropriate,
ampicillin (50 µg/ml) was added to these media.
TABLE 1.
Bacterial strains and plasmids used in this study
80°C until use. Aliquots (1 ml) were adsorbed with 200 mg (wet weight) of bacteria of an Sm type (ATCC 33270T)
or an RgSm variant (HG 1259Sm). For these
adsorptions the sera were subjected to four cycles of incubation, each
consisting of 1 h at room temperature and 12 h at 4°C,
followed by centrifugation at 14,000 × g for 5 min to
remove the bacteria.
-TriplEx arms
(CLONTECH Laboratories, Inc., Palo Alto, Calif.), followed by
phage
packaging reactions using the Gigapack II Plus Packaging Extract
(Stratagene Cloning Systems, La Jolla, Calif.), as recommended by the
manufacturer. After amplification of the primary library in XL-1-Blue,
10% chloroform was added and the library was stored at 4°C.
-TriplEx
phagemids containing DNA fragments encoding the FibA protein were
selected by immunoscreening, essentially as described by the
manufacturer. The immunoscreening of the resulting filters with
RgSm-adsorbed anti-Rg serum was performed as described in
the immunoblotting section. Phages of positive plaques were eluted from
isolated agar plugs, and this phage eluate was replated and rescreened to obtain single clones, which were subsequently converted to plasmids
in E. coli BM25.8, according to the manufacturer's
recommendations. The inserts of the converted plasmids were sequenced
by using the 5'-Texas Red-labeled T7 (TAATACGACTCACTATAGGG)
and 5'TriplEx (TTTTCTCGGGAAGCGCGCCAT) primers (Isogen
Bioscience BV, Maarssen, The Netherlands). Subclones were obtained by
cloning PCR fragments by using pGEM-T Vector System I (Promega Corp.,
Madison, Wis.) in E. coli DH5
F'; these subclones were
sequenced with T7 and Sp6 (CGATTTAGGTGACACTATAG) primers.
Sequence reactions were performed with a Thermo Sequenase premixed
cycle sequencing kit (catalog no. RPN2444; Vistra Systems, Amersham
Pharmacia Biotech, Roosendaal, The Netherlands) on a Vistra DNA
Sequencer 725 (Vistra Systems, Amersham). The sequencing data were
analyzed with Lasergene software (DNAstar Inc., Madison, Wis.). The
obtained DNA sequences were subsequently compared with sequences in the
NCBI database (National Center for Biotechnology Information, Los
Alamos, N.Mex.) by using the BLAST software.
![]()
RESULTS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References


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FIG. 1.
Micrographs of immunogold-labeled P. micros
HG 1259 (Rg type). Bacterial cells were incubated with anti-Rg serum
adsorbed with ATCC 33270T (Sm type) (A) or adsorbed with HG
1259Sm (RgSm type) (B). The latter serum was
also incubated with HG 1259Sm (RgSm variant)
(C). Bars, 1 µm.
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Immunoscreening of a
-TriplEx expression library and isolation
of fib clones.
To isolate the gene encoding the 42-kDa
constituent of the fibril-like structures, a
-TriplEx expression
library was constructed from partially Tsp509I-digested DNA
of strain HG 1259. The phagemids of the two seropositive plaques that
resulted from immunoscreening with RgSm type-adsorbed
anti-Rg type serum were subsequently converted to plasmids by
transduction into E. coli BM25.8. The two resulting plasmids
were designated pTX-Fib1 and pTX-Fib2. Restriction enzyme analysis
revealed that pTX-Fib1 contained an insert of approximately 1,400 nt,
whereas pTX-Fib2 contained an insert of approximately 2,600 nt.
Sequence of pTX-Fib1 and pTX-Fib2.
The combined sequence of
pTX-Fib1 and pTX-Fib2 was 3,248 nt long; the 3' end of the insert of
pTX-Fib1 overlapped the 5' end of clone pTX-Fib2 for a length of 738 nt
(Fig. 3). A sequence analysis of this
combined DNA fragment revealed the presence of one complete open
reading frame (ORF), designated fibA, spanning a total of
1,182 nt, encoding 393 amino acids (aa). The initiation codon of this
ORF at nt 662 was preceded by a putative Shine-Dalgarno sequence, AGGA
(25), at 6 nt from the start codon, and three putative
35
and
10 transcription initiation sequences homologous to the consensus
promoter sequences of gram-positive bacteria. A hairpin-loop sequence
that resembled a putative rho-independent transcription terminator was
present directly downstream of fibA (nt 1,861 to 1,886).
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35 or
10 transcription initiation sites and
Shine-Dalgarno sequences were found in this intergenic region. A 168-nt
carboxy-terminal region of a third putative ORF, designated
orf3, was located at the 5' end of the pTX-Fib1 clone (Fig.
3).
The GC content of the complete DNA fragment was 29.9%, which is
consistent with the GC content of 28 to 29% as indicated for the
species by Ezaki et al. (8). The GC contents of
fibA, orf2, and orf3 were 32.7, 31.2, and 34.5%, respectively. The GC content of the 324-nt intergenic
region between fibA and orf2 was 19.1%. The
493-nt intergenic region between orf3 and fibA
had a GC content of 26.2%.
FibA, the fibril-like subunit protein.
To confirm that
fibA encoded the antigen that was recognized by the
fibril-specific serum, the 42-kDa protein was isolated from a
nitrocellulose blot and subjected to N-terminal amino acid sequencing.
This analysis revealed a 15-residue sequence:
Ser-Ile-Asn-Arg-Gly-Glu-Ala-Lys-Glu-Lys-Tyr-Asp-Val-Ile-Pro. This amino
acid sequence was completely present in the deduced peptide sequence of
fibA, starting at aa 39. The predicted size of the 355-aa
mature FibA was 41,368 Da, which agreed with the size estimated by
SDS-PAGE. Analysis of the deduced FibA amino acid sequence revealed
that the most abundant amino acids were lysine (11.4%), asparagine
(8.6%), and valine (8.4%). The hydrophobicity profile of the FibA
peptide sequence (21) indicated that except for the first 30 residues, which comprised a highly hydrophobic region, the protein was
mainly hydrophilic. Conformational analysis using the algorithms of
Garnier et al. (12) and Chou and Fasman (3)
indicated no large
-helical domains in any part of the FibA protein.
The Chou-Fasman method predicted primarily turns.
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-D-thiogalactopyranoside), the
fibril-specific antibodies recognized an antigen of approximately 45 kDa that was not present in whole-cell lysate of control BM25.8 cells
(Fig. 2B). The observed molecular mass of this protein agreed with the
calculated molecular mass of the precursor protein encoded by
fibA, which was 45,564 Da. To confirm that the FibA protein was the antigenic determinant of the fibril-like structures, the RgSm type-adsorbed anti-Rg type serum was adsorbed with a
sonicate of BM25.8 harboring pTX-Fib2, grown in the presence of IPTG.
After this adsorption the 42-kDa antigen was no longer recognized in a
Western blot of whole-cell preparations of the Rg type and the RgSm type (Fig. 2A, lanes 7 and 8). Furthermore, no
attachment of gold particles to the fibril-like structures of the Rg
type was observed in immunogold EM with this pTX-Fib2 adsorbed serum
(data not shown).
Deduced amino acid sequence of orf2 and
orf3.
The second ORF on pTX-Fib2 exhibited high homology
with a large part of fibA both in nucleotide sequence and in
deduced amino acid sequence. Kyte and Doolittle (21)
analysis revealed that this peptide is also primarily hydrophilic
except for a small N-terminal domain. The Orf2 protein had a similar
C-terminal six-repeat domain (aa 243 to 361), which was 87.5%
identical to the FibA repeat domain. Furthermore, the domain preceding
the repeat domain, i.e., aa 111 to 242, also showed high similarity to
the FibA domain preceding the repeat domain. The N-terminal domain of
Orf2 (aa 31 to 173) exhibited homology with myosin proteins of various eukaryotic organisms (5). Similarities of 45 to 52% with
the myosin proteins, as indicated by a BLAST homology search, were based on a putative
-helix domain, which was indicated by analyses according to the methods of both Garnier et al. (12) and
Chou and Fasman (3). The signal sequence of this protein
contained features similar to those in the FibA leader peptide; the
methionine precedes two charged lysines and a hydrophobic core.
Putative protease cleavage sites were identified after alanine residues at positions 23 and 29. The deduced amino acid sequence of Orf3 was
also highly homologous to the C termini of FibA and Orf2 (Table 2).
fibA in Rg and Sm genotypes. To survey the presence of fibA in other Rg strains, in Sm strains, and in an RgSm variant, PCR analysis was performed with primers Fib-FN and Fib-RN. These primers were designed to specifically amplify the N-terminal region of the fibA gene, since the DNA encoding for the C-terminal region of fibA is apparently more generally used in genes encoding surface proteins in P. micros. This PCR analysis revealed the presence of this region of the fibA gene in all five Rg isolates and one RgSm strain but also in all six Sm-type strains (data not shown). These data were confirmed by dot blot analysis on chromosomal DNA of the indicated Rg strains, RgSm variant, and Sm strains of P. micros (Table 1), with the digoxigenin-labeled PCR product of HG 1259 (Rg type) as probe (data not shown).
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DISCUSSION |
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Long protruding fibril-like structures are a prominent morphological characteristic of the Rg type of P. micros. Morphologically similar structures are present on other oral bacteria, such as Porphyromonas gingivalis, Actinobacillus actinomycetemcomitans, Prevotella spp., Actinomyces spp., and streptococci. The fimbrial structures on these bacteria were shown to be key components in cell-to-surface and cell-to-cell adherence and therefore are assumed to be important in the pathogenesis of some oral and nonoral diseases (16). The fibril-like structures of P. micros seem to have a different function: compared to the RgSm variant and the Sm type, which both lack these structures, the Rg type adhered slightly less to epithelial cells (18). Additionally, no differences in coaggregation were observed among these three morphotypes of P. micros; they all displayed similar levels of aggregation with Fusobacterium nucleatum strains and nonencapsulated P. gingivalis strains (19).
In the present study a component of the fibril-like structures, designated FibA, was identified. Adsorption of an anti-Rg type serum with the RgSm variant, which lacks the fibril-like surface appendages (20), resulted in a serum that had an enhanced specificity for the fibril-like structures. This antiserum specifically recognized a 42-kDa protein of the Rg type. Two clones of an expression library of the Rg type, i.e., pTX-Fib1 and pTX-Fib2, were selected by immunoscreening with this serum. The gene, designated fibA, was present on both clones and encoded a putative 45,564-Da protein. IPTG-induced expression of fibA in E. coli resulted in the translation of a protein of approximately 45-kDa that was recognized by the fibril-specific antibodies. Furthermore, the N-terminal amino acid sequence of the 42-kDa antigen was present at aa 39 to 53 of the deduced FibA protein. Adsorption of the fibril-specific antiserum with a sonicate of the E. coli clone expressing FibA precursor protein removed the antibodies recognizing the 42-kDa FibA on a Western blot, and in immunogold EM no gold particles attached to the fibril-like structures. These results indicated that FibA is indeed an antigenic component of the fibril-like structures. However, it does not exclude the presence of other constituents in the fibril-like structures.
Remarkably, the Rg type-specific serum also recognized structures at cell-to-cell interfaces of the Rg bacteria. The most likely explanation for this is that the fibril-like structures originate from every single cell in a bacterial cluster and there aggregate to form the fibril-like structures. Hence the individual components of these larger structures like the 42-kDa FibA protein will also appear at cell-to-cell junctions. Although adsorption to generate an Rg type-specific serum was done with whole cells of the RgSm variant, antibodies from this serum still recognized a 42-kDa antigen in whole-cell preparations of the RgSm variant. Furthermore, in immunogold EM samples of the RgSm variant, substantial immunogold labeling was observed at cell-to-cell junctions and on sporadically observed structures that were not attached to bacterial cells, resembling the fibril-like structures (Fig. 1B). These observations indicate that the lack of fibril-like structures on the RgSm strain is not the result of a difference in the level of expression of FibA per se. Conformational changes in FibA, but more likely changes in the expression of other components of the fibril-like structure, may impair the attachment of these structures to the cell wall. Further research should focus on revealing the composition of the fibril-like structures and identification of the differences between the Rg and RgSm type, that are responsible for the loss of the fibril-like structures.
PCR analysis and dot blot analysis of the presence of the fibA gene revealed that the N-terminal region of fibA is present in Rg- and Sm-type P. micros strains. Although sequences similar to those of fibA are present in the Sm type, FibA-specific antibodies recognized no antigen in whole-cell preparations of this type. This might be caused by changes in the epitope of the translated protein or by an obstruction of transcription or translation of the Sm-type fibA gene. Similar phenomena have been described for other human pathogens; for example, H. pylori isolates that contain the pathogenicity island-associated cagA gene but lack CagA expression as a result of insertion upstream of the gene have been previously described (43).
The precursor of the FibA protein contained a putative 38-residue leader peptide. This leader peptide exhibited structural similarities to signal peptides of secreted proteins of other organisms, such as Bacillus spp. (31) and Mycoplasma spp. (4). The potential peptidase cleavage site at position 24 does not directly precede the N terminus of the mature FibA. This implicates the presence of a short propeptide, like the ones described for several secreted enzymes of Bacillus spp. (31). The presence of a secretion signal within the FibA precursor protein confirms that this protein is indeed an exported protein, which is in line with its presence in the fibril-like structure of P. micros. A structurally similar signal peptide was present in the deduced protein sequence of orf2, indicating that the product of this gene might also be an exported protein.
In gram-positive microorganisms, a hexameric LPXTGX motif followed by a highly hydrophobic membrane-spanning domain in the C-terminal region of proteins is probably important for anchoring of surface proteins in the cell membrane (10, 24, 29). These membrane-anchoring regions could not be identified in FibA or the deduced peptides of orf2. Both proteins contained a C-terminal repeat domain comprising a relatively large number of aromatic amino acids, which was homologous to the C termini of a family of surface proteins of streptococci and surface proteins and toxins of Clostridium spp. (39, 42, 44). This family of proteins includes surface-associated proteins PspA (44), SpsA (17), CbpA (27), and autolysin (11) from Streptococcus pneumoniae; glucosyltransferases from Streptococcus mutans (30, 36) and from Streptococcus downei (9, 13); and toxins A and B from Clostridium difficile (1, 6). These C-terminal repeats were shown to be involved in anchoring surface proteins to carbohydrate structures (39); more specifically, in S. pneumoniae PspA these repeats represent an anchoring mechanism via choline-mediated interaction with lipoteichoic acid (46). At present no information is available on the presence of choline in the cell wall of P. micros. Molecular characterization of PspA of S. pneumoniae revealed that a minimum of five 20-residue repeats is required for anchoring (45). In FibA and the deduced peptide of orf2, six repeats were present. The proximal two of these repeats exhibited only minor similarity to the four C-terminal repeats. These differences may result in a less-rigid anchoring to the cell surface carbohydrates, thus explaining why FibA is not only directly attached to the cell surface but is also part of the protruding fibril-like structures. From the fact that these C-terminal repeats were present in FibA and in the deduced peptides of orf2 and orf3, we hypothesize that this surface-anchoring mechanism is generally used in P. micros surface proteins.
Since the proteins encoded by fibA and orf2 are
highly homologous, they both might be involved in the assembly of the
fibril-like structures. Like the surface protein PspA from S. pneumoniae (44), the N-terminal region of the deduced
protein of orf2 contained heptad repeats, which are
implicative of an
-helical coiled-coil region. This region is
homologous to fibrous proteins like myosin proteins of eukaryotic
organisms (5). Therefore, this protein may account for the
fibril-like appearance of the surface structures.
The rapid loss of attached fibrils in vitro, resulting in the RgSm variants, and the absence of these variants from subgingival plaque samples (18) suggest that the fibril-like structures are essential features for the in vivo survival of the Rg type of the periodontal pathogen P. micros. Although the present study did not elucidate the biological function of the fibril-like structures of the Rg type of P. micros, it has identified an antigenic proteinaceus component (FibA) of the fibrillar structure. Sequence analysis of the gene encoding FibA did not reveal the biological function or its potential role in the assembly of the fibril-like structures. To determine the biological function of FibA, deletion mutants are required; however, at present no molecular tools for producing these mutants are available. At present experiments are focused on the development of molecular tools for P. micros.
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ACKNOWLEDGMENTS |
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We thank M. M. Gerrits, R. van Vugt, and A. J. Herscheid for technical assistance and I. Schadee-Eestermans for electron microscopy. We also thank B. J. Haijema for his critical review of the manuscript.
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FOOTNOTES |
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* Corresponding author. Mailing address: Department of Oral Microbiology, Academic Centre for Dentistry Amsterdam, van der Boechorststraat 7, 1081 BT Amsterdam, The Netherlands. Phone: 31-20-4448679. Fax: +31-20-4448318. E-mail: TJM.van_Steenbergen.omb.acta{at}med.vu.nl.
Present address: Department of Oral Biology, College of Dentistry,
Health Science Center, University of Florida, Gainesville, FL 32610.
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REFERENCES |
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| 1. |
Barroso, L. A.,
S.-Z. Wang,
C. J. Phelps,
J. L. Johnson, and T. D. Wilkins.
1990.
Nucleotide sequence of Clostridium difficile toxin B gene.
Nucleic Acids Res.
18:4004 |
| 2. | Carlsson, J., J. T. Larsen, and M.-B. Edlund. 1993. Peptostreptococcus micros has a uniquely high capacity to form hydrogen sulfide from glutathione. Oral Microbiol. Immunol. 8:42-45[Medline]. |
| 3. | Chou, P. Y., and G. D. Fasman. 1978. Prediction of secondary structure of proteins from their amino acid sequence. Adv. Enzymol. Relat. Areas Mol. Biol. 47:45-147[Medline]. |
| 4. | Cleavinger, C. M., M. F. Kim, J. H. Im, and K. S. Wise. 1995. Identification of mycoplasma membrane proteins by systematic TnphoA mutagenesis of a recombinant library. Mol. Microbiol. 18:283-293[Medline]. |
| 5. |
Cohen, C., and D. A. D. Parry.
1990.
-Helical coiled-coils and bundles: how to design an -helical protein.
Proteins Struct. Funct. Genet.
7:1-15.
[Medline] |
| 6. |
Dove, C. H.,
S.-Z. Wang,
S. B. Price,
C. J. Phelps,
D. M. Lyerly,
T. D. Wilkins, and J. L. Johnson.
1990.
Molecular characterization of the Clostridium difficile toxin A gene.
Infect. Immun.
58:480-488 |
| 7. | Dzink, J. L., R. J. Gibbons, W. C. Childs III, and S. S. Socransky. 1989. The predominant cultivable microbiota of crevicular epithelial cells. Oral Microbiol. Immunol. 4:1-5[Medline]. |
| 8. | Ezaki, T., H. Oyaizu, and E. Yabuuchi. 1992. The anaerobic gram-positive cocci, p. 1879-1892. In A. Balows, H. G. Trüper, M. Dworkin, W. Harder, and K. H. Schleifer (ed.), The prokaryotes, 2nd ed. Springer-Verlag KG, Berlin, Germany. |
| 9. |
Ferretti, J. J.,
M. L. Gilpin, and R. R. B. Russell.
1987.
Nucleotide sequence of a glucosyltransaferase gene from Streptococcus sobrinus MFe28.
J. Bacteriol.
169:4271-4278 |
| 10. | Fischetti, V. A., V. Pancholi, and O. Schneewind. 1990. Conservation of a hexapeptide sequence in the anchor region of surface proteins of Gram-positive cocci. Mol. Microbiol. 4:1603-1605[Medline]. |
| 11. | Garcia, P., J. L. Garcia, E. Garcia, and R. Lopez. Nucleotide sequence and expression of the pneumococcal autolysin gene from its own promoter in Escherichia coli. Gene 43:265-272. |
| 12. | Garnier, J., D. J. Osguthorpe, and D. Robson. 1978. Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J. Mol. Biol. 120:97-120[Medline]. |
| 13. |
Gilmore, K. S.,
R. R. B. Russell, and J. J. Ferretti.
1990.
Analysis of the Streptococcus downei gtfS gene, which specifies a glucosyltransferase that synthesizes soluble glucan.
Infect. Immun.
58:2452-2458 |
| 14. |
Grenier, D., and J. Michaud.
1994.
Demonstration of human immunoglobulin G Fc-binding activity in oral bacteria.
Clin. Diagn. Lab. Immunol.
1:247-249 |
| 15. | Haffajee, A. D., and S. S. Socransky. 1994. Microbial etiological agents of destructive periodontal disease. Periodontol. 2000 5:78-111[Medline]. |
| 16. | Hamada, S., A. Amano, S. Kimura, I. Nakagawa, S. Kawabata, and I. Morisaki. 1998. The importance of fimbriae in the virulence and ecology of some oral bacteria. Oral Microbiol. Immunol. 13:129-138[Medline]. |
| 17. | Hammerschmidt, S., S. R. Talay, P. Brandtzaeg, and G. S. Chhatwal. 1997. SpsA, a novel pneumococcal surface protein with specific binding to secretory immunoglobulin A and secretory component. Mol. Microbiol. 25:1113-1124[Medline]. |
| 18. | Kremer, B. H. A. 1998. Ph.D. thesis. Vrije Universiteit, Amsterdam, The Netherlands. |
| 19. | Kremer, B. H. A., A. J. Herscheid, W. Papaioannou, M. Quirynen, and T. J. M. van Steenbergen. 1999. Adherence of Peptostreptococcus micros morphotypes to epithelial cells in vitro. Oral Microbiol. Immunol. 14:49-55[Medline]. |
| 20. |
Kremer, B. H. A.,
J. T. Magee,
P. J. van Dalen, and T. J. M. van Steenbergen.
1997.
Characterization of smooth and rough morphotypes of Peptostreptococcus micros.
Int. J. Syst. Bacteriol.
47:363-368 |
| 21. | Kyte, J., and R. F. Doolittle. 1982. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157:105-132[Medline]. |
| 22. | Laemmli, U. K. 1970. Cleavage of structural proteins during assembly of the head of bacteriophage T4. Nature (London) 227:680-685[Medline]. |
| 23. |
Narberhaus, F., and H. Bahl.
1992.
Cloning, sequencing, and molecular analysis of the groESL operon of Clostridium acetobutylicum.
J. Bacteriol.
174:3282-3289 |
| 24. | Navarre, W. W., and O. Schneewind. 1994. Proteolytic cleavage and cell wall anchoring at the LPXTG motif of surface proteins of Gram-positive bacteria. Mol. Microbiol. 14:115-121[Medline]. |
| 25. |
O'Hanley, P.,
D. Lark,
S. Normark,
S. Falkow, and G. Schoolnik.
1983.
Mannose-sensitive and gal-gal binding E. coli pili from recombinant strains: chemical, functional and serological properties.
J. Exp. Med.
158:1713-1719 |
| 26. | Palazzolo, M. J., B. A. Hamilton, D. L. Ding, C. H. Martin, D. A. Mead, R. C. Mierendorf, K. V. Raghavan, E. M. Meyerowitz, and H. D. Lipshitz. 1990. Phage lambda cDNA cloning vectors for subtractive hybridization, fusion-protein synthesis and Cre-loxP automatic subcloning. Gene 88:25-36[Medline]. |
| 27. | Rosenow, C., P. Ryan, J. N. Weiser, S. Johnson, P. Fontan, A. Ortqvist, and H. R. Masure. 1997. Contribution of novel choline-binding proteins to adherence, colonization and immunogenicity of Streptococcus pneumoniae. Mol. Microbiol. 25:819-829[Medline]. |
| 28. | Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y. |
| 29. | Schneewind, O., P. Model, and V. A. Fischetti. 1992. Sorting of protein A to the staphylococcal cell wall. Cell 70:267-281[Medline]. |
| 30. |
Shiroza, T.,
S. Ueda, and H. K. Kuramitsu.
1987.
Sequence analysis of the gtfB gene from Streptococcus mutans.
J. Bacteriol.
169:4263-4270 |
| 31. | Simonen, M., and I. Palva. Protein secretion in Bacillus species. Microbiol. Rev. 57:109-137. |
| 32. |
Skerman, V. B. D.,
V. McGowan, and P. H. A. Sheath (ed.).
1980.
Approved lists of bacterial names.
Int. J. Syst. Bacteriol.
30:225-420 |
| 33. | Socransky, S. S. 1977. Microbiology of periodontal disease: present status and future considerations. J. Periodontol. 48:497-504[Medline]. |
| 34. | Tam, Y.-C., and E. C. S. Chan. 1984. Purification and characterization of hyaluronidase from oral Peptostreptococcus species. Infect. Immun. 47:508-513. |
| 35. |
Towbin, H.,
T. Staehelin, and J. Gordon.
1979.
Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications.
Proc. Natl. Acad. Sci. USA
76:4350-4354 |
| 36. | Ueda, S., T. Shiroza, and H. K. Kuramitsu. 1988. Sequence analysis of the gtfC gene from Streptococcus mutans GS-5. Gene 69:101-109[Medline]. |
| 37. |
Van Dalen, P. J.,
T. J. M. van Steenbergen,
M. M. Cowan,
H. J. Busscher, and J. de Graaff.
1993.
Description of two morphotypes of Peptostreptococcus micros.
Int. J. Syst. Bacteriol.
43:787-793 |
| 38. | Van Dalen, P. J., A. J. W. van Winkelhoff, and T. J. M. van Steenbergen. 1998. Prevalence of Peptostreptococcus micros morphotypes in patients with adult periodontitis. Oral Microbiol. Immunol. 13:62-64[Medline]. |
| 39. |
Von Eichel-Streiber, C.,
M. Suerborn, and H. K. Kuramitsu.
1992.
Evidence for a modular structure of the homologous repetitive C-terminal carbohydrate-binding sites of Clostridium difficile toxins and Streptococcus mutans glucosyltransferases.
J. Bacteriol.
174:6707-6710 |
| 40. |
von Heijne, G.
1986.
A new method for predicting signal sequence cleavage sites.
Nucleic Acids Res.
14:4683-4690 |
| 41. |
Wood, W. I.,
J. Gitschier,
L. A. Lasky, and R. M. Lawn.
1985.
Base composition-independent hybridization in tetramethylammonium chloride: a method for oligonucleotide screening of highly complex gene libraries.
Proc. Natl. Acad. Sci. USA
82:1585-1588 |
| 42. | Wren, B. W. 1991. A family of clostridial and streptococcal ligand-binding proteins with conserved C-terminal repeat sequences. Mol. Microbiol. 5:797-803[Medline]. |
| 43. | Xiang, Z., S. Censini, P. F. Bayeli, J. L. Telford, N. Figura, R. Rappuoli, and A. Covacci. 1995. Analysis of expression of CagA and VacA virulence factors in 43 strains of Helicobacter pylori reveals that clinical isolates can be divided into two major types and that CagA is not necessary for expression of the vacuolating cytotoxin. Infect. Immun. 63:94-98[Abstract]. |
| 44. |
Yother, J., and D. E. Briles.
1992.
Structural properties and evolutionary relationships of PspA, a surface protein of Streptococcus pneumoniae, as revealed by sequence analysis.
J. Bacteriol.
174:601-609 |
| 45. |
Yother, J.,
G. L. Handsome, and D. E. Briles.
1992.
Truncated forms of PspA that are secreted from Streptococcus pneumoniae and their use in functional studies and cloning of the pspA gene.
J. Bacteriol.
174:610-618 |
| 46. |
Yother, J., and J. M. White.
1994.
Novel surface attachment mechanism of the Streptococcus pneumoniae protein PspA.
J. Bacteriol.
176:2976-2985 |
| 47. | Young, M., N. P. Minton, and W. L. Staudenbauer. 1989. Recent advances in the genetics of clostridia. FEMS Microbiol. Rev. 63:301-326. |
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