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Journal of Bacteriology, October 2000, p. 5919-5921, Vol. 182, No. 20
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.

The Streptococcus pneumoniae Beta-Galactosidase Is a Surface Protein

Dorothea Zähner and Regine Hakenbeck*

Department of Microbiology, University of Kaiserslautern, D-67663 Kaiserslautern, Germany

Received 30 May 2000/Accepted 19 July 2000


    ABSTRACT
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The beta -galactosidase gene of Streptococcus pneumoniae, bgaA, encodes a putative 2,235-amino-acid protein with the two amino acid motifs characteristic of the glycosyl hydrolase family of proteins. In addition, an N-terminal signal sequence and a C-terminal LPXTG motif typical of surface-associated proteins of gram-positive bacteria are present. Trypsin treatment of cells resulted in solubilization of the enzyme, documenting that it is associated with the cell envelope. In order to obtain defined mutants suitable for lacZ reporter experiments, the bgaA gene was disrupted, resulting in a complete absence of endogenous beta -galactosidase activity. The results are consistent with beta -galactosidase being a surface protein that seems not to be involved in lactose metabolism but that may play a role during pathogenesis.


    TEXT
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Streptococcus pneumoniae is an important human pathogen, causing invasive diseases such as pneumonia, bacteremia, and meningitis. In order to analyze gene expression in this organism, the availability of reporter constructs is highly desirable. The Escherichia coli beta -galactosidase gene lacZ has been used in several studies. It has long been known that S. pneumoniae produces a beta -galactosidase that can be purified from the growth medium (8, 11), necessitating the isolation of mutants devoid of this enzyme activity for gene expression studies. However, the beta -galactosidase-negative S. pneumoniae strains described so far were spontaneously obtained and were not further characterized (6, 20). A beta -galactosidase activity of S. pneumoniae has been isolated from culture supernatants. The objectives of the present study were the identification of the gene encoding the beta -galactosidase from S. pneumoniae and the construction of a genetically defined beta -galactosidase-negative mutant suitable for work with lacZ reporter constructs in S. pneumoniae.

Identification of the bgaA gene. For sequence database searches, the BLAST program was used (2). A BLAST homology search of the unfinished S. pneumoniae capsular type 4 strain genome, obtained from The Institute for Genomic Research at http://www.tigr.org, revealed a 365-residue peptide with 26% identical amino acids compared to the beta -galactosidase of Streptococcus thermophilus. The peptide represented an internal region of a putative 2,235-amino acid protein, the product of a 6,704-bp open reading frame. The region covered the two motifs characteristic of glycosyl hydrolase family 2 (9), both of which showed some anomalies in the S. pneumoniae protein: the highly conserved residues Y in motif I and H in motif II were both replaced by an N (Fig. 1). The presence of these alterations was verified by direct sequencing between codons 285 and 716, using PCR products obtained from chromosomal DNA of S. pneumoniae strain R6, a nonencapsulated derivative of Rockefeller University strain R36A (3). For direct sequencing, a BigDye terminator cycle sequencing kit (Perkin-Elmer, Warrington, England) was used.


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FIG. 1.   Schematic representation of the beta -galactosidase of S. pneumoniae (S.p.). The amino acid (aa) sequences are given for three important regions: the N-terminal signal peptide (residues 1 to 55; the arrow marks the putative signal peptidase cleavage site); the two conserved motifs of glycosyl hydrolase family 2 (hatched boxes) within the region homologous to other beta -galactosidases (stippled box; approximately residues 90 to 600); and 35 C-terminal residues with the cell wall-anchoring LPXTG motif (stippled box at right end). The putative active site is aligned with beta -galactosidases of the following organisms: S.t., S. thermophilus (SWISS-PROT P23989); T.e., Thermoanaerobacter ethanolicus (SWISS-PROT P77989); L.d., Lactobacillus delbrueckii (SWISS-PROT P33486); and E. coli (GenBank AJ002684). Strictly conserved amino acid residues within the motifs are highlighted. The C-terminal region is compared to those of other proteins containing an LPXTG motif: M-protein, S. pyogenes M protein (PIR S30283); S. pneumoniae proteins NanA (neuraminidase A; SWISS-PROT 59959), StrH (beta -N-acetylglucosaminidase; SWISS-PROT P49610), and Hya (hyaluronidase; SWISS-PROT Q54873). Dots indicate gaps in the alignment; the asterisk marks the C terminus.

The deduced 2,235-amino-acid sequence (247.3 kDa) revealed several features not typical of described beta -galactosidases, all of which are only approximately 1,000 amino acids long. The conserved beta -galactosidase motifs are located in the first half of the protein. A region of about 100 amino acid residues at the N terminus contains a putative signal peptide (Fig. 1). The structure of this signal peptide is similar to those of the consensus sequence of signal peptides from gram-positive bacteria, suggesting that the enzyme is exported (17, 19). The second half of the protein has no similarity to other proteins, except for the extreme C terminus, which contains an LPXTG motif preceding a hydrophobic domain, features of gram-positive bacterial surface proteins (15). Similar C termini are present in the Streptococcus pyogenes M protein (16) and several pneumococcal surface proteins, e.g., neuraminidase A (5), hyaluronidase (4), and N-acetylglucosaminidase (7) (Fig. 1).

Disruption of the bgaA gene. In order to test whether bgaA encodes the S. pneumoniae beta -galactosidase, the erythromycin resistance determinant ermA from the Enterococcus faecalis plasmid pAMbeta 1 (14) was inserted into bgaA, resulting in disruption of the reading frame. A single MunI site was introduced into an internal bgaA fragment by site-directed mutagenesis (10), and the mutagenized fragment was cloned into vector pCR2.1 (Invitrogen, Leiden, The Netherlands). The ermA gene was amplified with oligonucleotide primers 5'- AGAGTGTGTTGATAGTGCAGTATC and 5'-TTATTTCCTCCCGTTAAATAATAG from pJDC9 (14), cloned into pCR2.1, and reisolated after EcoRI restriction; the ermA gene could now be cloned into the MunI site of the bgaA fragment to give plasmid pBER. A 1.6-kb DNA fragment containing the erm cassette and flanking bgaA regions was amplified from pBER by PCR and used as donor DNA in transformation experiments with S. pneumoniae R6 as a recipient. Transformation was performed essentially as described previously (18). With 1 µg of erythromycin per ml for selection, Eryr colonies were readily obtained, and integration of the Eryr marker in the bgaA gene in individual mutants was verified by PCR.

beta -Galactosidase activity in bgaA mutants. The Eryr transformant R6 bgaA::erm showed no beta -galactosidase activity when tested on D-agar plates (1) containing 5-bromo-4-chloro-3-indolyl-beta -D-galactopyranoside (X-Gal) and catalase (17,000 U ml-1; Sigma-Aldrich, Munich, Germany), whereas colonies of the parental R6 strain appeared light blue. In addition, beta -galactosidase activity was determined in liquid cultures using C medium (12) supplemented with 0.2% yeast extract at 37°C without aeration. Samples were removed at different cell densities. After centrifugation (5 min at 12,000 × g), cells were resuspended in 0.1 M sodium phosphate buffer-0.1% Triton X-100 and lysed during 5 min of incubation at 37°C. beta -Galactosidase activity was determined essentially as described by Miller (13) with o-nitrophenyl-beta -D-galactopyranoside as a substrate. None of the transformants showed any activity compared to the 60 Miller units of activity of strain R6. These results demonstrate that the bgaA gene encodes the beta -galactosidase of S. pneumoniae and that it is solely responsible for the endogenous beta -galactosidase activity of this species.

Localization of beta -galactosidase. Since the beta -galactosidase of S. pneumoniae has been isolated from culture supernatants (11), enzyme activity in the growth medium was determined and compared to cell-associated activity, i.e., in cell lysates (Table 1). Ninety-five percent of the activity was found in cell lysates. In order to distinguish between intracellular and surface localization of beta -galactosidase, intact cells were harvested by centrifugation, washed once with 0.1 M sodium phosphate buffer (pH 7.5), resuspended in the same buffer containing trypsin (1 µg/ml; Promega, Madison, Wis.), and incubated for 5 min at 37°C. After centrifugation, 57% of the beta -galactosidase activity was found in the supernatant. In a control experiment, bgaA mutant cells that expressed the E. coli lacZ gene (R6 bgaA::erm uppS-lacZ) were used (22). This mutant produces E. coli beta -galactosidase in the cytoplasm and, after trypsin treatment, only traces of the enzyme could be detected in the solubilized fraction; these results demonstrate that trypsin does not induce cellular lysis (Table 1). In wild-type cells, the overall beta -galactosidase activity after trypsin treatment was reduced to 51%, probably due to a limited resistance of the pneumococcal protein to trypsin.

                              
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TABLE 1.   Cellular localization of S. pneumoniae beta -galactosidase

Growth on lactose. Most beta -galactosidases play a major role in lactose metabolism and can be induced by lactose. When S. pneumoniae R6 bgaA::erm was grown in C medium lacking glucose and sucrose (the only defined carbon sources in this medium) and without yeast extract, but with lactose, no effect on generation time was detected compared to that of the parental strain R6. Strain R6 contained similar beta -galactosidase activities independent of the carbon source, and the addition of isopropyl-beta -D-thiogalactopyranoside (IPTG) also had no effect on beta -galactosidase expression (data not shown). These results confirm that BgaA is the only beta -galactosidase in S. pneumoniae and strongly suggest that BgaA is not involved in lactose metabolism. This conclusion is further confirmed by the presence in the pneumococcal genome of two ORFs encoding proteins highly similar to the 6-phospho-beta -galactosidases of Lactococcus lactis and Staphylococcus aureus, both of which are preceded by genes encoding protein IIB/C of a putative lactose-specific phosphotransferase system.

Concluding remarks. For several surface proteins of gram-positive bacteria, proteolytic cleavage and subsequent release into the environment have been described (15). The present characterization of the S. pneumoniae beta -galactosidase as a surface protein is in agreement with a putative role of the enzyme in the interaction with host cells, rather than an involvement in lactose metabolism. Surface proteins such as neuraminidase A, hyaluronidase, and N-acetylglucosaminidase of S. pneumoniae, all of which contain an LPXTG motif, have been described as virulence factors (4, 5, 7), and it is conceivable that beta -galactosidase is a virulence factor as well. The presence of antibodies against beta -galactosidase in convalescent-phase serum from a patient with a history of pneumococcal infection is in agreement with this assumption (24). The unusual high specificity of the enzyme for beta -1,4-glycosidic bonds and a 10-times-higher specificity for Galbeta 1-4GlcNAc than for lactose (23) make it an ideal candidate for attacking polysaccharides conjugated to surface components of eukaryotic cells. Indeed, this property has been exploited for the analysis of complex polysaccharides (21). Curiously, no homologues of the pneumococcal enzyme with a signal peptide and the surface-anchoring LPXTG motif were detected in the genome databases of Streptococcus mutans and S. pyogenes. The availability of defined S. pneumoniae bgaA mutants will help to clarify the role of beta -galactosidase in vivo and provides a suitable genetic background for expression studies using lacZ reporter constructs.

Nucleotide sequence accession number. The DNA sequence of S. pneumoniae bgaA has been deposited in GenBank under accession number AF282987.


    ACKNOWLEDGMENTS

This work was supported by the Deutsche Forschungsgemeinschaft (grants Ha 1011/7-1 and Ha 1011/7-2) and by European Commission contract no. BI04-CT98-0424.


    FOOTNOTES

* Corresponding author. Mailing address: Department of Microbiology, University of Kaiserslautern, Paul Ehrlich Strasse, D-67663 Kaiserslautern, Germany. Phone: 49-631-205-2353. Fax: 49-631-205-3799. E-mail: hakenb{at}rhrk.uni-kl.de.


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Journal of Bacteriology, October 2000, p. 5919-5921, Vol. 182, No. 20
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.



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