Previous Article | Next Article 
Journal of Bacteriology, November 2000, p. 6456-6462, Vol. 182, No. 22
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
Characterization of a Novel Outer Membrane
Hemin-Binding Protein of Porphyromonas gingivalis
S. G.
Dashper,1
A.
Hendtlass,1
N.
Slakeski,1
C.
Jackson,1
K. J.
Cross,1
L.
Brownfield,1
R.
Hamilton,2
I.
Barr,2 and
E. C.
Reynolds1,*
School of Dental Science, The University of
Melbourne, Melbourne,1 and CSL Ltd.,
Parkville,2 Victoria, Australia
Received 15 May 2000/Accepted 30 August 2000
 |
ABSTRACT |
Porphyromonas gingivalis is a gram-negative, anaerobic
coccobacillus that has been implicated as a major etiological agent in
the development of chronic periodontitis. In this paper, we report the
characterization of a protein, IhtB (iron heme transport; formerly
designated Pga30), that is an outer membrane hemin-binding protein
potentially involved in iron assimilation by P. gingivalis. IhtB was localized to the cell surface of P. gingivalis by
Western blot analysis of a Sarkosyl-insoluble outer membrane
preparation and by immunocytochemical staining of whole cells using
IhtB peptide-specific antisera. The protein, released from the cell
surface, was shown to bind to hemin using hemin-agarose. The growth of
heme-limited, but not heme-replete, P. gingivalis cells was
inhibited by preincubation with IhtB peptide-specific antisera. The
ihtB gene was located between an open reading frame
encoding a putative TonB-linked outer membrane receptor and three open
reading frames that have sequence similarity to ATP binding cassette
transport system operons in other bacteria. Analysis of the deduced
amino acid sequence of IhtB showed significant similarity to the
Salmonella typhimurium protein CbiK, a cobalt chelatase
that is structurally related to the ATP-independent family of
ferrochelatases. Molecular modeling indicated that the IhtB amino acid
sequence could be threaded onto the CbiK fold with the IhtB structural
model containing the active-site residues critical for chelatase
activity. These results suggest that IhtB is a peripheral outer
membrane chelatase that may remove iron from heme prior to uptake by
P. gingivalis.
 |
INTRODUCTION |
Porphyromonas gingivalis,
a black-pigmented, gram-negative, anaerobic coccobacillus, has been
implicated as a major pathogen in the development and progression of
chronic periodontitis, an inflammatory disease resulting in the
destruction of the supporting tissues of the teeth (19, 24, 45,
46). P. gingivalis has an essential requirement for
iron, which it prefers in the form of heme. Heme can be acquired from a
range of hemoproteins at low concentrations (<10 µM), including
hemoglobin, cytochrome c, haptoglobin-hemoglobin and
hemopexin (5, 20, 31). The growth and virulence of P. gingivalis are dependent on heme availability (32) such
that growth under conditions of heme excess has been reported to
enhance the virulence of the bacterium in a murine model of infection
(30), although Genco et al. (13) have suggested that heme limitation results in increased virulence.
Heme and other iron complexes including siderophores are used as a
source of iron by a variety of gram-negative bacteria, including
Yersinia, Escherichia, and Vibrio spp.
(51). Typically, a TonB-linked outer membrane receptor
transports heme into the periplasmic space, where it is transported
intact into the cell by a multicomponent periplasmic binding
protein-dependent ATP binding cassette (ABC) transport system
(34).
The heme uptake mechanisms of P. gingivalis have not been
well characterized, although a variety of cell envelope heme-binding proteins have been reported (6, 22, 44). P. gingivalis siderophores have not been identified (6).
Heme has been shown to bind to the P. gingivalis cell
surface and is then transported into the cell by a process that
requires energy (14). Both protoporphyrin IX (PPIX) and
nonradiolabeled heme compete for radiolabeled heme binding, indicating
that at least one outer membrane receptor specific for the PPIX ring is
involved in heme binding (14). Smalley et al.
(44) have suggested that P. gingivalis has both high- and low-affinity binding sites for heme.
Bramanti and Holt (4) demonstrated that 10 cell
surface-associated proteins ranging in size from 26 to 80 kDa were
expressed when P. gingivalis was grown under heme-limited
conditions. These authors proposed that a 26-kDa protein that is
produced by P. gingivalis under conditions of heme
limitation has a role in heme binding and uptake (7).
Smalley et al. (43) have also identified P. gingivalis heme-repressible proteins and suggested that these proteins may belong to a binding system for heme uptake that is induced
by low levels of environmental heme. However, these proposed systems
have not been defined.
We have previously purified an antigenic 30-kDa protein, IhtB (iron
heme transport; formerly designated Pga30), from chloroform-treated P. gingivalis W50 (17). This protein was
identified by its strong reactivity in a Western blot using serum from
a control subject who harbored subgingival P. gingivalis but
did not display clinical signs of periodontitis. However, IhtB was not
recognized by sera from eight patients with moderate to severe
periodontitis who also harbored subgingival P. gingivalis
(17).
We report here the characterization of IhtB as an outer membrane
hemin-binding protein, and we also report the cloning and sequence
analysis of the ihtB gene. We propose that IhtB is a peripheral outer membrane chelatase involved in iron transport by
P. gingivalis.
 |
MATERIALS AND METHODS |
Bacterial strains and maintenance.
P. gingivalis W50
was grown routinely in brain heart infusion broth supplemented with
0.5% (wt/vol) L-cysteine and 1 µg of hemin per ml in an
anaerobe chamber (MK3 Anaerobic Workstation; Don Whitely Scientific,
Adelaide, South Australia, Australia) with an atmosphere of 10%
CO2, 5% H2, and 85% N2 at 37°C.
Escherichia coli strain JM109 was grown aerobically in
Luria-Bertani broth at 37°C. E. coli clones harboring
pUC18 plasmids were grown in Luria-Bertani broth supplemented with
ampicillin (100 µg/ml) at 37°C.
Genomic library construction and screening.
The P. gingivalis W50
GEM-12 genomic library described previously
(42) was screened using synthetic degenerate
oligonucleotides corresponding to the amino acid sequence ENKGEAT,
derived from the N-terminal sequence of the previously purified IhtB
protein (17) using standard techniques (37).
Oligonucleotide probes were 5' end labeled using
[
-32P]ATP and T4 polynucleotide kinase. Approximately
3,000 plaques were screened by lifting onto nylon membranes and
hybridized overnight with radiolabeled oligonucleotides in
hybridization buffer (90 mM sodium citrate, 150 mM NaCl, 0.25%
[wt/vol] sodium dodecyl sulfate [SDS], 1× Denhardt's solution
[37], 48°C, 2 h). The filters were washed in 90 mM sodium citrate-0.1% (wt/vol) SDS at 48°C. A positively
hybridizing
clone was selected, and a 4.6-kb BamHI
fragment was recovered and ligated into BamHI-digested, bovine alkaline phosphatase-treated pUC18 (Amersham Pharmacia Biotech,
Castle Hill, New South Wales, Australia) and transformed into E. coli JM109 by electroporation (37).
DNA sequencing and sequence analysis.
Double-stranded
plasmid template DNA was prepared by the procedure of Li and Schweizer
(28). The DNA was sequenced in both directions using
sequence-derived, synthetic oligonucleotides by the dideoxy-chain
termination method (38) with a Sequenase version 2.0 nucleotide sequencing kit used as recommended by the manufacturer
(United States Biochemicals, Cleveland, Ohio). Nucleotide and deduced
amino acid sequence data were analyzed using program suites accessed by
the Australian National Genomic Information Service or by the National
Center for Biotechnology Information website at
http://www.ncbi.nlm.nih.gov. The preliminary sequence data of the
P. gingivalis W83 genome was obtained from The Institute for
Genomic Research website at http://www.fasta.genome.ad.jp/.
IhtB conformational modeling.
Using GeneFold (Tripos Inc.,
St. Louis, Mo.), the deduced amino acid sequence of IhtB was threaded
onto the members of a library of nonredundant protein folds derived
from structures deposited in the Protein Data Bank (PDB) including the
Salmonella typhimurium CbiK fold (PDB code lQGO)
and the Bacillus subtilis PPIX ferrochelatase fold (PDB code
1AK1) to identify the fold most likely to be adopted by
IhtB. A model of IhtB was constructed based on the CbiK fold, identified by GeneFold, using Sybyl (Tripos). High-energy contacts between amino acyl residues in the model were progressively relieved by
simulated annealing at 20 K using the AMBER force field. A distance-dependent dielectric
= r and a nonbond cutoff distance of
8 Å were used. Simulations were performed for 400 to 500 fs with a
time step of 0.1 fs, a nonbonded reset interval and momentum removal at
25-fs intervals, and a thermal bath coupling of 10 fs. The final model
was energy minimized to a maximum derivative of 0.05 kcal
mol
1 Å
1 using the MMFF94s
force field. The program WHAT IF was used to assess the
quality of the model (48).
Northern and Southern analyses.
Northern and Southern blots
were prepared as described previously (42). Nylon membranes
were hybridized at 48°C in hybridization buffer with the
oligonucleotide probe 5'-GATCGGGATAAGCTGCGGC-3', antisense
to the deduced amino acid sequence AAAYPDQ found in IhtB. Membranes
were washed to 3× SSC (1× SSC is 0.15 M NaCl plus 0.015 M sodium
citrate)-0.1% SDS at 48°C.
Primer extension analysis.
Total P. gingivalis
RNA was isolated as described previously (42). Primer
extension was performed using 10 µg of total RNA and the AMV Reverse
Transcriptase Primer Extension System in accordance with the
manufacturer's (Promega Corporation, Madison, Wis.) instructions.
Production of IhtB peptide-specific antisera.
A synthetic
15-mer peptide corresponding to C-terminal residues 279 to 293 of IhtB
was used to raise IhtB peptide-specific antisera. The peptide,
including an N-terminal Cys for attachment, with the sequence
CIRNIWLKHMKATSAR, was commercially synthesized and conjugated to
diphtheria toxoid by Chiron Mimotopes (Melbourne, Victoria, Australia).
The peptide-diphtheria toxoid conjugate was then emulsified with
Freund's incomplete adjuvant and injected subcutaneously at four sites
into the backs of two Dutch rabbits and one New Zealand White rabbit.
Immunization was carried out three times at 4-week intervals. Ten days
after the final immunization, blood from each rabbit was analyzed by
enzyme-linked immunosorbent assay using unconjugated peptide as the
absorbed antigen. Three days later, the rabbits were sacrificed and
their blood was collected by cardiac puncture. The blood was incubated
at 37°C for 1 h to enhance clot formation and then incubated at
4°C overnight to encourage clot retraction. The serum was separated
from the clot and stored at
70°C until required.
Cell fractionation.
Outer membrane fractions of P. gingivalis were prepared by the Sarkosyl method (11, 12,
22). In short, P. gingivalis cells were harvested from
a 500-ml culture during the late exponential growth phase by
centrifugation (5,000 × g, 20 min, 4°C) and
suspended in 5 ml of 20 mM Tris-HCl (pH 7.4)-10 mM EDTA-1 mM
N
-p-tosyl-L-lysine chloromethyl
ketone (TLCK)-1% sodium lauryl sarcosinate. The cells were disrupted
by three passages through a French pressure cell at 109 MPa
(SLM-Aminco, Urbana, Ill.). Whole cells were removed by centrifugation
(5,000 × g, 20 min, 4°C). The Sarkosyl-insoluble (outer membrane) fraction was separated by high-speed centrifugation (100,000 × g, 30 min). The pellet (outer membrane
fraction) was washed three times in 0.5% sodium lauryl sarcosinate and
then resuspended in 20 mM Tris-HCl (pH 7.4)-10 mM EDTA-1 mM TLCK and analyzed by SDS-polyacrylamide gel electrophoresis (PAGE) and Western
blot assay after boiling of the outer membrane fraction in SDS sample
buffer for 10 min (3).
SDS-PAGE and Western blot analysis.
Proteins to be subjected
to Western blot analysis were separated using a discontinuous SDS-PAGE
system in accordance with the method of Laemmli (23) with a
12% (wt/vol) polyacrylamide separating gel and a 4% (wt/vol)
polyacrylamide stacking gel. Proteins were stained with 0.1% Coomassie
brilliant blue R-250 in 45.5% (vol/vol) ethanol-9% (vol/vol) acetic
acid. Gels were destained in 25% (vol/vol) ethanol-8% (vol/vol)
acetic acid. Prestained standards (Bio-Rad Laboratories, Hercules,
Calif.) were included. Following SDS-PAGE, protein transfer was
performed in 10% (wt/vol) methanol at a constant voltage of 60 V for
90 min onto a polyvinylidene difluoride membrane (proBlott; PE
Biosystems, Scoresby, Victoria, Australia). N-terminal sequencing of
transblotted proteins was done as previously described (3).
For Western blot analysis, the membrane was blocked with 50% (wt/vol)
skim milk powder in TN buffer (25 mM Tris-HCl, 0.5 M NaCl [pH 7.5])
at 25°C for 1 h. The membrane was then incubated with the
primary antibody (IhtB peptide-specific antiserum, 1/100) at 4°C
overnight. The membrane was washed three times in TN buffer and then
incubated at 25°C for 2 h with the second antibody (horseradish
peroxidase-conjugated goat anti-rabbit immunoglobulin G [IgG] diluted
1/1,000 in TN buffer). The membrane was then washed three times in TN
buffer. Binding of the goat anti-rabbit IgG was visualized with 0.5%
(wt/vol) 4-chloro-1-naphthol, 16% (vol/vol) methanol, and 0.015%
(vol/vol) H2O2 in TN buffer.
Immunocytochemical localization of IhtB on P. gingivalis cells.
Exponentially growing P. gingivalis cells were adsorbed onto Formvar-coated nickel grids by
application of 10 µl of a P. gingivalis culture. The grids
were then dried onto 2% (wt/vol) Noble agar, blocked by flotation on
1% (wt/vol) casein in phosphate-buffered saline (PBS; 10 mM
Na2HPO4-NaH2PO4, 150 mM
NaCl [pH 7.2]) for 10 min, and then incubated with the primary
antibody overnight at 4°C. The primary antibody was rabbit IhtB
peptide-specific antisera or nonspecific rabbit sera diluted 1/20 in
casein-PBS. A control of 1% (wt/vol) casein in PBS was also included
when the primary antibody was omitted. The grids were washed with
casein-PBS for 30 min and then incubated with goat anti-rabbit IgG
conjugated with 10-nm colloidal gold (Sigma) diluted 1/20 for 2 h
at 25°C. After incubation, the grids were washed with 1% (wt/vol)
casein in PBS for 30 min, followed by a PBS wash for 15 min, and then fixed with 2.5% (vol/vol) glutaraldehyde in 0.1 M HEPES-PBS for 2 min.
The grids were finally washed with distilled water for 15 min,
negatively stained with 2% (vol/vol) ammonium molybdate, and then
examined using a Philips CM10 electron microscope operating at 60 kV.
Preparation of cell surface and periplasmic proteins.
P.
gingivalis cell surface and periplasmic proteins were released
using chloroform treatment as described previously (17). Briefly, exponentially growing P. gingivalis cells were
harvested from a 500-ml culture by centrifugation (5,000 × g, 20 min, 4°C). Chloroform (10 ml per liter of original
culture) was added to the cell pellet and incubated at 25°C for 15 min with gentle rocking. Buffer A (50 mM NaCl, 20 mM Tris-HCl, 10 mM
EDTA [pH 8.0]; 50 ml per liter of original culture) was added, and
the suspension was centrifuged (5,000 × g, 20 min,
4°C) to remove whole cells. The upper aqueous phase was removed and
further clarified by centrifugation (20,000 × g, 30 min, 4°C). A protein concentration of 4.1 mg/ml was obtained in the
final extract.
Hemin-agarose binding.
Hemin-agarose binding was performed
essentially as described by Lee (25). Briefly, 200 µl of
hemin-agarose (Sigma-Aldrich Pty. Ltd., Castle Hill, New South Wales,
Australia) was washed with 100 mM NaCl-25 mM Tris-HCl (pH 7.4).
Washing was performed three times by suspension of the agarose in 1 ml
of buffer, followed by centrifugation (10,000 × g, 5 min). The P. gingivalis cell surface and periplasmic extract
(500 µl) was incubated with the hemin-agarose for 3 h at 37°C
with gentle mixing. The sample was centrifuged (10,000 × g, 5 min), and the supernatant was removed. The hemin-agarose was
washed three times as described above, and bound proteins were eluted
by incubation for 2 min with 2 M guanidine-HCl (100 µl), which was
separated from the hemin-agarose beads by centrifugation
(10,000 × g, 5 min). A negative control, omitting the
hemin-agarose, was included and treated in an identical manner. Proteins in the 2 M guanidine-HCl eluants were analyzed by SDS-PAGE and
Western blotting (see above).
Growth studies.
Heme-limited cells of P. gingivalis were produced by three passages in basal medium (1%
[wt/vol] Proteose Peptone, 0.5% [wt/vol] Trypticase Peptone, 0.5%
[wt/vol] yeast extract, 0.25% [wt/vol] KCl) supplemented with
0.5% (wt/vol) L-cysteine (BM) using a 10% inoculum and
incubation for 24 h in an anaerobe chamber at 37°C. BM
containing ~1.0 × 109 heme-limited P. gingivalis cells per ml was divided into 2-ml aliquots and
centrifuged (4,000 × g, 10 min, 37°C). Cell pellets were suspended and incubated for 1 h at 37°C in 1 ml of (i) IhtB peptide-specific antisera that had been heat inactivated at 56°C for
30 min, (ii) heat-inactivated normal rabbit sera (NRS), or (iii) BM
with hemin (1 µg/ml). The cells were washed (three times) in BM (1 ml) with hemin, followed by suspension in the same medium (300 µl).
Each P. gingivalis cell suspension was inoculated into 2.7 ml of BM with hemin, and growth was monitored spectrophotometrically at
a wavelength of 650 nm.
Nucleotide sequence accession number.
The nucleotide
sequence of the ihtB ORF has been deposited in the GenBank
database and assigned accession no. AF195649.
 |
RESULTS |
Cloning and sequence analysis of ihtB.
A P. gingivalis genomic library constructed in
GEM-12 was screened
using degenerate oligonucleotides corresponding to the N-terminal amino
acid sequence ENKGEAT of the previously purified protein IhtB, formerly
designated Pga30 (17). Southern blot analysis revealed a
4.6-kb BamHI fragment that positively hybridized with the
oligonucleotides corresponding to the IhtB sequence. The 4.6-kb
BamHI fragment was ligated into BamHI-digested
pUC18 and transformed into electrocompetent E. coli JM109
cells. Plasmid DNA was recovered from transformed cells, and the insert
was sequenced in both directions. The insert DNA nucleotide sequence
contained a single complete open reading frame (ORF) that we have
designated ihtB (iron heme transport). The ihtB
ORF comprises 882 bp. The deduced amino acid sequence of IhtB contained
293 amino acyl residues with a predicted molecular mass of 32.4 kDa.
The deduced IhtB sequence was found to contain an additional 24 amino
acyl residues N terminal to the sequence identified for the previously
purified IhtB protein (see underlining in Fig. 6A) (17). The
first 19 residues of this deduced N-terminal sequence is typical of a
prokaryotic leader sequence and contains a net positive charge at the N
terminus (the start Met followed by two Lys residues), followed by a
stretch of hydrophobic residues (residues 4 to 17). This hydrophobic
stretch terminates with the sequence
15Ala-Met-Leu-Ser-Cys19, which conforms to the
consensus signal peptidase II cleavage site and lipoprotein attachment
site (18).
A putative Shine-Dalgarno sequence (AAGAA) was identified six bases
upstream from the suggested start codon (ATG). Primer extension
analysis of ihtB showed that the transcription start point
is 267 bases upstream from the methionine translation start codon
(21). A nearly perfect invert repeat sequence was identified 45 nucleotides downstream from the stop codon, between bases 1391 and
1439 (AGAGCACTtATCGAGAAgaaggacttgccgatTTCTCGATgAGTGCTCT). This was immediately followed by a stretch of T residues,
suggesting that this represents a rho factor-independent RNA hairpin
transcription terminator (50). The size of the predicted
transcript from the transcription start point to the proposed
termination site is in agreement with the Northern blot result that
showed a transcript of the appropriate size, 1.3 kb (Fig.
1).

View larger version (26K):
[in this window]
[in a new window]
|
FIG. 1.
Northern blot analysis of P. gingivalis RNA.
Hybridization with an oligonucleotide probe specific for
ihtB showed a single transcript of 1.3 kb. The relative
positions of RNA molecular size markers are indicated.
|
|
When the deduced amino acid sequence of IhtB was compared with
sequences in the databases, significant sequence identity was
found
only with CbiK from
S. typhimurium, a member of the
ATP-independent
ferrochelatase family of enzymes (
36). An
overall sequence identity
of 37.6% (99 of 264 residues) and a sequence
similarity of 59.8%
(158 of 264 residues) between IhtB and CbiK were
found.
An ORF, which we have designated
ihtA, was located
immediately upstream of
ihtB using The Institute for Genomic
Research
P. gingivalis W83 preliminary genomic sequence data
and the ORF finder
program from the National Center for Biotechnology
Information
(Fig.
2). Sequence analysis
revealed that the deduced amino acid
sequence encoded by
ihtA had identity with TonB-linked outer membrane
receptors
involved in iron complex and vitamin B
12 transport in
other
gram-negative bacteria, including the ferric receptor of
Campylobacter coli with 25% identity (149 of 591 residues)
and
41% similarity (248 of 591 residues), the colicin I receptor
precursor
of
E. coli with 25% identity (158 of 617 residues) and 41% similarity
(260 of 617 residues), the ferric
enterobactin receptor of
Bordetella pertussis with 24%
identity (175 of 727 residues) and 39% similarity
(287 of 727 residues), and the vitamin B
12 receptor precursor
of
S. typhimurium with 22% identity (142 of 618 residues) and
40% similarity (255 of 618 residues) (
2,
15,
16,
49).
The
presence of a putative leader sequence and TonB box III in
the
N-terminal region of the deduced amino acid sequence of IhtA
further
supports the proposed function of this protein.

View larger version (16K):
[in this window]
[in a new window]
|
FIG. 2.
The ihtABCDE genetic locus of P. gingivalis that encodes a proposed iron transport system. The
putative function and size of the product of each gene are shown. The
arrows indicate the relative positions of each of the predicted coding
regions, and the shaded areas indicate the presence of leader
sequences. aa, amino acids.
|
|
Located directly downstream of
ihtB were three other
predicted ORFs, which we have designated
ihtC to
-
E (Fig.
2). Sequence
analysis showed that the deduced IhtE
protein contains the Walker
A and B and ABC signature sequence motifs
that are characteristic
of ATP-binding proteins of ABC transport
systems (
39). IhtE
also displayed significant sequence
identity (36% over 227 amino
acids) to FepC, the ferric enterobactin
transport ATP-binding
protein of
E. coli (
41).
Sequence analysis of the deduced amino
acid sequence of IhtD revealed
little identity to other known
proteins. However, this hypothetical
protein is hydrophobic and
contains nine putative membrane-spanning
domains, as predicted
by TopPred 2. This is consistent with this
protein being an inner
membrane permease. The deduced amino acid
sequence of IhtC showed
little identity to other known proteins.
However, the presence
of a putative leader sequence and a region that
has identity to
the iron complex-binding motif of gram-negative
bacterial periplasmic
binding proteins (
47) is
consistent with this being a periplasmic
binding protein of an ABC
transport
system.
Cellular localization of IhtB.
IhtB was localized to the outer
membrane of P. gingivalis by subjecting a Sarkosyl-insoluble
outer membrane preparation to SDS-PAGE and Western blot analysis using
the IhtB peptide-specific antisera. A diffuse band at 32 to 34 kDa,
which was N terminally blocked and reactive with the IhtB
peptide-specific antisera was detected in the Sarkosyl-insoluble outer
membrane fraction that was not seen in the cytoplasmic fraction (Fig.
3). These results confirm the specificity
of the peptide-specific antisera for IhtB, and the diffuse nature of
the band, as well as the blocked N terminus, is consistent with the
proposed N-terminal lipid modification (membrane attachment).

View larger version (88K):
[in this window]
[in a new window]
|
FIG. 3.
Western blot analysis of cell fractions produced by
French pressure treatment of P. gingivalis and probed with
IhtB peptide-specific antisera. Mw, molecular size markers; lane 1, cytoplasmic fraction; lane 2, Sarkosyl-insoluble outer membrane
fraction.
|
|
IhtB was further localized to the cell surface of
P. gingivalis by transmission electron microscopy of whole cells
after immunolabeling
with the IhtB peptide-specific antisera and a
gold-conjugated
secondary antibody. Analysis of 50 grid squares (100 by
100 µm)
for both specifically and nonspecifically labeled cells
revealed
that cells incubated with the IhtB peptide-specific antisera
were
surface labeled with 25.15 ± 8.76 gold
particles/µm
2, which was significantly greater labeling
(
P < 0.001, using Student's
t test) than
that of cells incubated with the nonspecific rabbit
sera, which were
surfaced labeled with only 2.90 ± 1.71 gold
particles/µm
2.
Hemin-agarose binding.
Hemin-binding proteins present in cell
surface and periplasmic proteins released by chloroform treatment of
P. gingivalis were identified using Western blot analysis of
proteins that bound to hemin-agarose. Proteins eluted from the
hemin-agarose with 2 M guanidine-HCl were separated using SDS-PAGE and
then subjected to Western blot analysis using IhtB peptide-specific
antisera. This analysis revealed a single sharp band at 30 kDa (Fig.
4). This protein was identified by
N-terminal sequence analysis as the N-terminally truncated IhtB
previously identified (17). This band was not seen on
omission of the hemin-agarose (Fig. 4) or on the use of unmodified
agarose.

View larger version (73K):
[in this window]
[in a new window]
|
FIG. 4.
Western blot analysis of P. gingivalis outer
membrane and periplasmic proteins eluted from hemin-agarose with 2 M
guanidine-HCl. This Western blot analysis used IhtB peptide-specific
antisera. Mw, molecular size markers; lane 1, control omitting the
hemin-agarose; lane 2, hemin-agarose eluant.
|
|
Growth studies.
When cells were passaged three times in liquid
basal medium containing no added heme, P. gingivalis growth
during the third passage was comparable to that seen in the first
passage. However, growth in this medium was not sustainable for a
fourth passage (data not shown). The heme-depleted P. gingivalis cells from the third passage were harvested by
centrifugation and preincubated with heat-inactivated IhtB
peptide-specific antisera, heat-inactivated NRS, or growth medium.
Growth of the P. gingivalis cells preincubated with
heat-inactivated NRS was slightly stimulated; however, growth of cells
preincubated with IhtB peptide-specific heat-inactivated antisera was
inhibited, as shown by the 20-h increase in lag phase compared with the
cells preincubated with media (Fig. 5).
Preincubation of heme-replete cells with the IhtB peptide-specific,
heat-inactivated antisera, however, did not result in growth inhibition
(data not shown).

View larger version (28K):
[in this window]
[in a new window]
|
FIG. 5.
Growth of P. gingivalis in batch culture in
basal medium with hemin (1 µg/ml). Heme-depleted cells of P. gingivalis were preincubated for 1 h at 37°C in IhtB
peptide-specific antiserum which had been heat inactivated at 56°C
for 30 min ( ), heat-inactivated NRS ( ), or basal medium with
hemin ( ). Points represent the mean of three independent
determinations. OD, optical density.
|
|
IhtB conformational model.
Molecular modeling of IhtB
demonstrated that the IhtB amino acid sequence could be threaded onto
the fold of S. typhimurium CbiK in preference to any other
known fold in the PDB. The alignment of the deduced amino acid
sequences of CbiK and IhtB generated by GeneFold (Tripos) is presented
in Fig. 6A. The Z scores obtained supported the validity of the IhtB conformational model
(48). The model fold is bilobal in structure, consisting of
two similar domains that each contain a four-stranded parallel
-sheet flanked by
-helices, with the active site located in a
deep rectangular cleft between the two domains. Figure 6B shows the
active site of the model structure, highlighting residues involved in
the formation of the active site and substrate binding. The histidine residues in CbiK that have been identified as being functionally critical for chelatase activity have analogous residues in the IhtB
structural model (His174 and His236).

View larger version (51K):
[in this window]
[in a new window]
|
FIG. 6.
(A) Alignment of CbiK and IhtB deduced amino acid
sequences generated by GeneFold. Shading indicates identical residues,
and bold indicates conservative substitutions. Residues that are
conserved across the entire anaerobic, ATP-independent cobalt and
ferrochelatase class of proteins (40) are indicated by
asterisks. Numbering indicates the position in the IhtB sequence of the
His residues (His174 and His236) proposed to be
critical for chelatase activity. The N-terminal sequence obtained for
the purified N-terminally truncated protein (17) is
underlined. (B) Ribbon diagram of the active site of the IhtB
conformational model showing the putative heme-binding site constructed
using the Sybyl program. Residues believed to be important for
substrate binding and active-site conformation are labeled and have
side chains displayed.
|
|
 |
DISCUSSION |
Iron has been shown to play an essential role in the growth and
virulence of P. gingivalis and is preferred by the bacterium in the form of heme (5). In this study, we have
characterized a hemin-binding peripheral outer membrane protein of
P. gingivalis (IhtB) that we propose is a chelatase involved
in iron removal for uptake.
The deduced amino acid sequence of IhtB (Fig. 6A) exhibited significant
similarity to only one other known protein, CbiK from S. typhimurium (37.6% identity). CbiK is an anaerobic cobalt
chelatase that inserts cobalt into the tetrapyrrole ring of precorrin
and has been proposed to be part of the cobalamin biosynthesis pathway in S. typhimurium (35, 40). CbiK is a
single-subunit, ATP-independent enzyme that, on the basis of
biochemical characterization and sequence similarity, has been proposed
to be a member of a class of enzymes including the PPIX ferrochelatase
(HemZ), sirohydrochlorin ferrochelatases (CysG and Met8P), and the
other known anaerobic cobalt chelatase (CbiX) (40). Although
there is low overall sequence identity between the proteins within the
PPIX ferrochelatase-anaerobic cobalt chelatase class, 14 residues are
conserved within this class of enzyme. IhtB contains 13 of these 14 residues, and the only nonidentical residue is a conservative Thr
Ser
substitution at position 40 in IhtB (Fig. 6A). PPIX ferrochelatases
catalyze the insertion of iron into PPIX to produce protoheme and have also been shown to remove Fe2+ from heme when an
Fe2+ sink exists (1, 29). CbiK is
conformationally similar to the PPIX ferrochelatase of B. subtilis, although there is little sequence identity (1,
40). CbiK has also been shown to function as a ferrochelatase, as
well as a cobalt chelatase (35). Both CbiK and the PPIX
ferrochelatase are bilobal in structure, consisting of two similar
domains that each contain a four-stranded parallel
-sheet flanked by
-helices. The active site of these enzymes is located in a deep
rectangular cleft between these two domains (40). Molecular
modeling of IhtB demonstrated that the IhtB amino acid sequence could
be threaded onto the chelatase fold. The histidine residues in CbiK
that have been identified as being functionally critical for chelatase
activity have analogous residues in the IhtB structural model (His174
and His236). These analogous histidine residues occupy similar
structural locations in the IhtB model, although this was not a
constraint applied during model building (Fig. 6B). The chelatase
active site is defined by four loops (Fig. 6B). Two of these loops (to
the right in Fig. 6B) are largely conserved between CbiK and IhtB, with
only the conservative Thr40Ser (IhtB numbering) change. The other two
loops display less conservative changes, with Asn112Pro and Asp114Arg substitutions in the upper left loop and Ala176Thr and Ser177Glu substitutions in the lower left loop. These residues are located toward
the ends of the cleft and presumably interact with functional groups
located on the periphery of the tetrapyrrole group and may thus be
responsible for the substrate specificity of the chelatase. Recently,
ihtB has been expressed in E. coli and the
recombinant protein exhibited chelatase activity (M. Warren, personal communication).
The CbiK protein is part of a cobalamin biosynthesis pathway of
S. typhimurium and has been reported to have an
intracellular location (35). However, in this study, IhtB
has been localized to the cell surface of P. gingivalis. The
N-terminal 19 residues of the deduced amino acid sequence of IhtB have
the characteristics of a typical prokaryotic leader sequence, which is
consistent with an extracellular location for the protein
(33). This sequence is not present in CbiK, and it appears
that IhtB has an additional 27 N-terminal amino acyl residues compared
with CbiK (Fig. 6A).
The amino acid sequence and conformational similarity to CbiK and the
presence of the active-site residues of the chelatases suggest that
IhtB plays a role in iron removal from heme at the cell surface, where
the Iht transport system would act as an iron sink. Hemin-agarose
binding of P. gingivalis cell surface and periplasmic
proteins, followed by Western blot analysis of bound proteins eluted
with 2 M guanidine-HCl using IhtB peptide-specific antisera, confirmed
that IhtB is a hemin-binding protein. Presumably, the oxidized form of
the iron (Fe3+) in hemin prevented iron removal by the IhtB
Fe2+ chelatase activity.
Three P. gingivalis heme-binding outer membrane proteins
have been identified by other investigators when cells were grown under
conditions of hemin limitation. A 32-kDa protein and a 30-kDa protein
were identified by staining of SDS-PAGE gels with the chromogenic
substrate tetramethylbenzidine, a method that utilizes the intrinsic
peroxidase activity possessed by heme (22, 44). The third
known heme-binding outer membrane protein of P. gingivalis is a 26-kDa protein, Omp26, that has been shown to be involved in heme
uptake and appears to move across the outer membrane depending upon the
heme concentration in the growth medium (6, 7, 8). As an
N-terminally truncated IhtB protein was originally purified from
P. gingivalis and characterized by SDS-PAGE as a 30-kDa
protein (17), it is possible that IhtB, with a predicted molecular mass of 32.4 kDa for the full-length protein, represents the
30- and 32-kDa heme-binding proteins initially identified by Smalley et
al. (44).
It is interesting that the N-terminal amino acyl residue of the
previously purified N-terminally truncated IhtB (Pga30) protein (17) is immediately preceded by a Lys residue
(Lys24) in the deduced IhtB protein sequence (Fig. 6A).
P. gingivalis W50 produces a cell surface proteinase, Kgp
(formerly designated PrtK), which cleaves specifically at Lys residues
(3), and it is therefore likely that the cleavage of IhtB by
Kgp enabled release of the protein from the outer membrane upon
chloroform treatment (17). The N-terminally truncated
protein appeared as a sharp 30-kDa band upon SDS-PAGE (Fig. 4), whereas
the membrane-attached form of the protein appeared as a diffuse 32- to
34-kDa band (Fig. 3) which was N-terminally blocked, being consistent
with the proposed N-terminal lipid modification of the membrane form of
the protein.
Incubation of heme-limited P. gingivalis, but not
heme-replete cells, with heat-inactivated IhtB peptide-specific
antiserum prior to inoculation into medium containing hemin resulted in a substantially increased lag time compared with incubation in NRS or
media (Fig. 5). This result is consistent with the proposal that IhtB
is involved in transport of iron into the cell and also provides
further evidence for the surface location of IhtB.
Iron and iron complex transport in gram-negative bacteria has been
shown to be mediated via TonB-linked outer membrane receptors combined
with inner membrane ABC transport systems (9). The ORF
located immediately upstream of ihtB encodes a protein
(IhtA) whose deduced amino acid sequence contains a TonB box III motif and displays significant sequence similarity to TonB-linked outer membrane receptors involved in iron complex and vitamin B12
transport in other gram-negative bacteria. Three ORFs
(ihtCDE) located immediately downstream of ihtB
showed similarity to an inner membrane ABC iron complex transport
system, and these ORFs have been shown to be cotranscribed as part of
an operon using reverse transcription-PCR (N. Slakeski et al.,
unpublished data). Together, these data suggest that IhtB is part of a
transport system involved in iron transport in P. gingivalis. IhtB appears to be a peripheral outer membrane hemin-binding chelatase that potentially acts as an accessory protein
for iron removal from heme prior to iron transport through the
TonB-linked receptor. IhtA and IhtB may therefore be analogous to the
system encoded by the tbpBA operon of Neisseria
meningitidis, which is essential for transferrin utilization
(26). The tbpA gene encodes an iron-repressible
TonB-linked outer membrane receptor, while tbpB encodes a
peripheral outer membrane accessory lipoprotein. These proteins act as
a two-component receptor system that has been shown to remove iron from
transferrin prior to transport into the periplasm (10).
In conclusion, we have characterized an antigenic, peripheral outer
membrane hemin-binding protein of P. gingivalis W50 and suggest that this protein is part of an iron transport system that is
important for the growth of P. gingivalis.
 |
ACKNOWLEDGMENTS |
We gratefully acknowledge the excellent technical assistance of
Caroline Moore, Stephen Cleal, Chris Poon, and Peter Riley. Preliminary
sequence data were obtained from The Institute for Genomic Research
website at http://www.tigr.org.
This research was supported by a University of Melbourne Postgraduate
Research Scholarship awarded to A. Hendtlass. Sequencing of P. gingivalis was accomplished with support from National Institute of Dental and Craniofacial Research grant DE-12082.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: School of Dental
Science, The University of Melbourne, 711 Elizabeth St., Melbourne 3000, Victoria, Australia. Phone: 61 3 9341 0270. Fax: 61 3 9341 0236. E-mail: e.reynolds{at}dent.unimelb.edu.au.
 |
REFERENCES |
| 1.
|
Al-Karadaghi, S.,
M. Hansson,
S. Nikonov,
B. Jonsson, and L. Hederstedt.
1997.
Crystal structure of ferrochelatase: the terminal enzyme in heme biosynthesis.
Structure
5:1501-1510[Medline].
|
| 2.
|
Beall, B., and G. N. Sanden.
1995.
A Bordetella pertussis FepA homologue required for utilization of exogenous ferric enterobactin.
Microbiology
141:3193-3205[Abstract/Free Full Text].
|
| 3.
|
Bhogal, P. S.,
N. Slakeski, and E. C. Reynolds.
1997.
A cell-associated protein complex of Porphyromonas gingivalis W50 composed of Arg- and Lys-specific cysteine proteinases and adhesins.
Microbiology
143:2485-2495[Abstract/Free Full Text].
|
| 4.
|
Bramanti, T., and S. Holt.
1990.
Iron-regulated outer membrane proteins in the periodontopathogenic bacterium Bacteroides gingivalis.
Biochem. Biophys. Res. Commun.
166:1146-1154[CrossRef][Medline].
|
| 5.
|
Bramanti, T. E., and S. C. Holt.
1991.
Roles of porphyrins and host iron transport proteins in regulation of growth of Porphyromonas gingivalis W50.
J. Bacteriol.
173:7330-7339[Abstract/Free Full Text].
|
| 6.
|
Bramanti, T. E., and S. C. Holt.
1992.
Localization of a Porphyromonas gingivalis 26-kilodalton heat-modifiable, hemin-regulated surface protein which translocates across the outer membrane.
J. Bacteriol.
174:5827-5839[Abstract/Free Full Text].
|
| 7.
|
Bramanti, T. E., and S. C. Holt.
1993.
Hemin uptake in Porphyromonas gingivalis: Omp26 is a hemin-binding surface protein.
J. Bacteriol.
175:7413-7420[Abstract/Free Full Text].
|
| 8.
|
Bramanti, T., and S. Holt.
1993.
Effects of porphyrins and host iron transport proteins on outer membrane protein expression in Porphyromonas gingivalis: identification of a novel 26 kDa hemin-repressible surface protein.
Microb. Pathog.
13:61-73[CrossRef].
|
| 9.
|
Braun, V.
1995.
Energy-coupled transport and signal transduction through the Gram-negative outer membrane via TonB-ExbB-ExbD-dependent receptor proteins.
FEMS Microbiol. Rev.
16:295-307[CrossRef][Medline].
|
| 10.
|
Chen, C.-Y.,
S. A. Berish,
S. A. Morse, and T. A. Mietzner.
1993.
The ferric iron binding protein of pathogenic Neisseria spp. functions as a periplasmic transport protein in iron acquisition from human transferrin.
Mol. Microbiol.
10:311-318[Medline].
|
| 11.
|
Deslauriers, M.,
D. ni Eidhin,
L. Lamonde, and C. Mouton.
1990.
SDS-PAGE analysis of protein and lipopolysaccharide of extracellular vesicles and Sarkosyl-insoluble membranes from Bacteroides gingivalis.
Oral Microbiol. Immunol.
5:1-7[Medline].
|
| 12.
|
Filip, C.,
G. Fletcher,
J. L. Wulff, and C. F. Earhart.
1973.
Solubilization of the cytoplasmic membrane of Escherichia coli by the ionic detergent sodium-lauryl sarcosinate.
J. Bacteriol.
115:717-722[Abstract/Free Full Text].
|
| 13.
|
Genco, C.
1995.
Regulation of hemin and iron transport in Porphyromonas gingivalis.
Adv. Dent. Res.
9:41-47[Abstract/Free Full Text].
|
| 14.
|
Genco, C. A.,
B. M. Odusanya, and G. Brown.
1994.
Binding and accumulation of hemin in Porphyromonas gingivalis are induced by hemin.
Infect. Immun.
62:2885-2892[Abstract/Free Full Text].
|
| 15.
|
Griggs, D. W.,
B. B. Tharp, and J. Konisky.
1987.
Cloning and promoter identification of the iron-regulated cir gene of Escherichia coli.
J. Bacteriol.
169:5343-5352[Abstract/Free Full Text].
|
| 16.
|
Guerry, P.,
J. Perez-Casal,
R. Yao,
A. McVeigh, and T. J. Trust.
1997.
A genetic locus involved in iron utilization unique to some Campylobacter strains.
J. Bacteriol.
179:3997-4002[Abstract/Free Full Text].
|
| 17.
| Hendtlass, A., S. G. Dashper, and E. C. Reynolds. Purification of an antigenic protein (Pga30) from
Porphyromonas gingivalis. Oral Microbiol. Immunol., in
press.
|
| 18.
|
Hofmann, K.,
P. Bucher,
L. Falquet, and A. Bairoch.
1999.
The PROSITE database, its status in 1999.
Nucleic Acids Res.
27:215-219[Abstract/Free Full Text].
|
| 19.
|
Holt, S. C.,
J. Ebersole,
J. Felton,
M. Brunsvold, and K. S. Korman.
1988.
Implantation of Bacteroides gingivalis in non-human primates initiates progression of periodontitis.
Science
239:55-57[Abstract/Free Full Text].
|
| 20.
|
Inoshita, E.,
K. Iwakura,
A. Amano,
H. Tamagawa, and S. Shizukuishi.
1991.
Effect of transferrin on the growth of Porphyromonas gingivalis.
J. Dent. Res.
70:1258-1261[Abstract/Free Full Text].
|
| 21.
|
Jackson, C. A.,
B. Hoffmann,
N. Slakeski,
S. Cleal,
A. Hendtlass, and E. C. Reynolds.
2000.
A consensus Porphyromonas gingivalis promoter sequence.
FEMS Microbiol. Lett.
186:133-138[CrossRef][Medline].
|
| 22.
|
Kim, S.,
L. Chu, and S. Holt.
1996.
Isolation and characterisation of a hemin-binding cell envelope protein from Porphyromonas gingivalis.
Microb. Pathog.
20:65-70.
|
| 23.
|
Laemmli, U. K.
1970.
Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
Nature
227:680-685[CrossRef][Medline].
|
| 24.
|
Lamont, R. J., and H. F. Jenkinson.
1998.
Life below the gum line: pathogenic mechanisms of Porphyromonas gingivalis.
Microbiol. Mol. Biol. Rev.
62:1244-1263[Abstract/Free Full Text].
|
| 25.
|
Lee, B. C.
1992.
Isolation of an outer membrane hemin-binding protein of Haemophilus influenzae type B.
Infect. Immun.
60:810-816[Abstract/Free Full Text].
|
| 26.
|
Legrain, M.,
V. Mazarin,
S. W. Irwin,
B. Bouchon,
M. J. Quentin-Millet,
E. Jacobs, and A. B. Schryvers.
1993.
Cloning and characterization of Neisseria meningitidis genes encoding the transferrin-binding proteins Tbp1 and Tbp2.
Gene
130:73-80[CrossRef][Medline].
|
| 27.
|
Lewis, J. P.,
J. A. Dawson,
J. C. Hannis,
D. Muddiman, and F. L. Macrina.
1999.
Hemoglobinase activity of the lysine gingipain protease (Kgp) of Porphyromonas gingivalis W83.
J. Bacteriol.
181:4905-4913[Abstract/Free Full Text].
|
| 28.
|
Li, M., and H. P. Schweizer.
1993.
Resolution of common DNA sequencing ambiguities of GC-rich DNA templates by terminal deoxynucleotidyl transferase without dGTP analogues.
Focus
15:19-20.
|
| 29.
|
Loeb, K.
1995.
Ferrochelatase activity and protoporphyrin IX utilization in Haemophilus influenzae.
J. Bacteriol.
177:3613-3615[Abstract/Free Full Text].
|
| 30.
|
Marsh, P. D.,
A. S. McDermid,
A. S. McKee, and A. Baskerville.
1994.
The effect of growth rate and haemin on the virulence and proteolytic activity of Porphyromonas gingivalis W50.
Microbiology
140:861-865[Abstract/Free Full Text].
|
| 31.
|
Mayrand, D., and S. C. Holt.
1988.
Biology of asaccharolytic black-pigmented Bacteroides species.
Microbiol. Rev.
52:134-152[Free Full Text].
|
| 32.
|
McKee, A.,
A. McDermid,
A. Baskerville,
B. Dowsett,
D. Elwood, and P. Marsh.
1986.
Effect of hemin on the physiology and virulence of Bacteroides gingivalis W50.
Infect. Immun.
52:349-355[Abstract/Free Full Text].
|
| 33.
|
Neidhart, F. C.,
J. L. Ingram, and M. Schaechter.
1990.
Physiology of the bacterial cell: a molecular approach.
Sinauer Associates, Inc., Sunderland, Mass.
|
| 34.
|
Nikaido, H., and J. A. Hall.
1998.
Overview of bacterial ABC transporters.
Methods Enzymol.
292:3-20[Medline].
|
| 35.
|
Raux, E.,
C. Thermes,
P. Heathcote,
A. Rambach, and M. J. Warren.
1997.
A role for Salmonella typhimurium cbiK in cobalamin (Vitamin B12) and siroheme biosynthesis.
J. Bacteriol.
179:3202-3212[Abstract/Free Full Text].
|
| 36.
|
Roth, J. R.,
J. G. Lawrence,
M. Rubenfield,
S. Kieffer-Higgins, and G. M. Church.
1993.
Characterization of cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium.
J. Bacteriol.
175:3303-3316[Abstract/Free Full Text].
|
| 37.
|
Sambrook, J.,
E. F. Fritsch, and T. Maniatis.
1989.
Molecular cloning: a laboratory manual, 2nd ed.
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
|
| 38.
|
Sanger, F.,
S. Nicklen, and A. R. Coulsen.
1977.
DNA sequencing with chain-terminating inhibitors.
Proc. Natl. Acad. Sci. USA
74:5463-5467[Abstract/Free Full Text].
|
| 39.
|
Schneider, E., and S. Hunke.
1998.
ATP-binding-cassette (ABC) transport systems: functional and structural aspects of the ATP-hydrolyzing subunits/domains.
FEMS Microbiol. Rev.
22:1-20[CrossRef][Medline].
|
| 40.
|
Schubert, H. L.,
E. Raux, E.,
K. S. Wilson, and M. J. Warren.
1999.
Common chelatase design in the branched tetrapyrrole pathways of heme and anaerobic cobalamin synthesis.
Biochemistry
38:10660-10669[CrossRef][Medline].
|
| 41.
|
Shea, C. M., and M. A. McIntosh.
1991.
Nucleotide sequence and genetic organization of the ferric enterobactin transport system: homology to other periplasmic binding protein-dependent systems in Escherichia coli.
Mol. Microbiol.
5:1415-1428[Medline].
|
| 42.
|
Slakeski, N.,
S. M. Cleal, and E. C. Reynolds.
1996.
Characterisation of a Porphyromonas gingivalis gene prtR that encodes an arginine-specific thiol proteinase and multiple adhesins.
Biochem. Biophys. Res.
224:605-610[CrossRef][Medline].
|
| 43.
|
Smalley, J. W.,
A. J. Birss,
A. S. McKee, and P. D. Marsh.
1991.
Haemin-restriction influences hemin-binding haemagglutination and protease activity of cells and extracellular membrane vesicles of Porphyromonas gingivalis W50.
FEMS Microbiol. Lett.
69:63-67[Medline].
|
| 44.
|
Smalley, J. W.,
A. J. Birss,
A. S. McKee, and P. D. Marsh.
1993.
Haemin-binding proteins of Porphyromonas gingivalis W50 grown in a chemostat under haemin-limitation.
J. Gen. Microbiol.
139:2145-2150[Abstract/Free Full Text].
|
| 45.
|
Socransky, S. S.,
A. D. Haffajee,
M. A. Cugini,
C. Smith, and R. L. Kent.
1998.
Microbial complexes in subgingival plaque.
J. Clin. Periodontol.
25:134-144[CrossRef][Medline].
|
| 46.
|
Socransky, S. S., and A. D. Haffajee.
1992.
The bacterial etiology of destructive periodontal disease: current concepts.
J. Periodontol.
63:322-331[Medline].
|
| 47.
|
Tam, R., and M. H. Saier, Jr.
1993.
Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria.
Microbiol. Rev.
57:320-346[Abstract/Free Full Text].
|
| 48.
|
Vriend, G.
1990.
WHAT IF: a molecular modelling guide and drug design.
J. Mol. Graph.
58:52-56.
|
| 49.
|
Wei, B. Y.,
C. Bradbeer, and R. J. Kadner.
1992.
Conserved structural and regulatory regions in the Salmonella typhimurium btuB gene for the outer membrane vitamin B12 transport protein.
Res. Microbiol.
143:459-466[Medline].
|
| 50.
|
Wilson, K. S., and P. H. von Hippel.
1995.
Transcription termination at intrinsic terminators: the role of the RNA hairpin.
Biochemistry
92:8793-8797.
|
| 51.
|
Woolridge, K. G., and P. H. Williams.
1993.
Iron uptake mechanisms of pathogenic bacteria.
FEMS Microbiol. Rev.
12:325-348[CrossRef][Medline].
|
Journal of Bacteriology, November 2000, p. 6456-6462, Vol. 182, No. 22
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Furuta, N., Takeuchi, H., Amano, A.
(2009). Entry of Porphyromonas gingivalis Outer Membrane Vesicles into Epithelial Cells Causes Cellular Functional Impairment. Infect. Immun.
77: 4761-4770
[Abstract]
[Full Text]
-
Dashper, S. G., Ang, C.-S., Veith, P. D., Mitchell, H. L., Lo, A. W. H., Seers, C. A., Walsh, K. A., Slakeski, N., Chen, D., Lissel, J. P., Butler, C. A., O'Brien-Simpson, N. M., Barr, I. G., Reynolds, E. C.
(2009). Response of Porphyromonas gingivalis to Heme Limitation in Continuous Culture. J. Bacteriol.
191: 1044-1055
[Abstract]
[Full Text]
-
Lewis, J. P., Plata, K., Yu, F., Rosato, A., Anaya, C.
(2006). Transcriptional organization, regulation and role of the Porphyromonas gingivalis W83 hmu haemin-uptake locus.. Microbiology
152: 3367-3382
[Abstract]
[Full Text]
-
James, C. E., Hasegawa, Y., Park, Y., Yeung, V., Tribble, G. D., Kuboniwa, M., Demuth, D. R., Lamont, R. J.
(2006). LuxS Involvement in the Regulation of Genes Coding for Hemin and Iron Acquisition Systems in Porphyromonas gingivalis. Infect. Immun.
74: 3834-3844
[Abstract]
[Full Text]
-
Liu, X., Olczak, T., Guo, H.-C., Dixon, D. W., Genco, C. A.
(2006). Identification of Amino Acid Residues Involved in Heme Binding and Hemoprotein Utilization in the Porphyromonas gingivalis Heme Receptor HmuR. Infect. Immun.
74: 1222-1232
[Abstract]
[Full Text]
-
Furano, K., Luke, N. R., Howlett, A. J., Campagnari, A. A.
(2005). Identification of a conserved Moraxella catarrhalis haemoglobin-utilization protein, MhuA. Microbiology
151: 1151-1158
[Abstract]
[Full Text]
-
Furano, K., Campagnari, A. A.
(2004). Identification of a Hemin Utilization Protein of Moraxella catarrhalis (HumA). Infect. Immun.
72: 6426-6432
[Abstract]
[Full Text]
-
Nguyen, K.-A., DeCarlo, A. A., Paramaesvaran, M., Collyer, C. A., Langley, D. B., Hunter, N.
(2004). Humoral Responses to Porphyromonas gingivalis Gingipain Adhesin Domains in Subjects with Chronic Periodontitis. Infect. Immun.
72: 1374-1382
[Abstract]
[Full Text]
-
Paramaesvaran, M., Nguyen, K.-A., Caldon, E., McDonald, J. A., Najdi, S., Gonzaga, G., Langley, D. B., DeCarlo, A., Crossley, M. J., Hunter, N., Collyer, C. A.
(2003). Porphyrin-Mediated Cell Surface Heme Capture from Hemoglobin by Porphyromonas gingivalis. J. Bacteriol.
185: 2528-2537
[Abstract]
[Full Text]
-
Battistoni, F., Platero, R., Duran, R., Cervenansky, C., Battistoni, J., Arias, A., Fabiano, E.
(2002). Identification of an Iron-Regulated, Hemin-Binding Outer Membrane Protein in Sinorhizobium meliloti. Appl. Environ. Microbiol.
68: 5877-5881
[Abstract]
[Full Text]
-
Murphy, E. R., Sacco, R. E., Dickenson, A., Metzger, D. J., Hu, Y., Orndorff, P. E., Connell, T. D.
(2002). BhuR, a Virulence-Associated Outer Membrane Protein of Bordetella avium, Is Required for the Acquisition of Iron from Heme and Hemoproteins. Infect. Immun.
70: 5390-5403
[Abstract]
[Full Text]
-
Olczak, T., Dixon, D. W., Genco, C. A.
(2001). Binding Specificity of the Porphyromonas gingivalis Heme and Hemoglobin Receptor HmuR, Gingipain K, and Gingipain R1 for Heme, Porphyrins, and Metalloporphyrins. J. Bacteriol.
183: 5599-5608
[Abstract]
[Full Text]
-
Sroka, A., Sztukowska, M., Potempa, J., Travis, J., Genco, C. A.
(2001). Degradation of Host Heme Proteins by Lysine- and Arginine-Specific Cysteine Proteinases (Gingipains) of Porphyromonas gingivalis. J. Bacteriol.
183: 5609-5616
[Abstract]
[Full Text]
-
Roper, J. M., Raux, E., Brindley, A. A., Schubert, H. L., Gharbia, S. E., Shah, H. N., Warren, M. J.
(2000). The Enigma of Cobalamin (Vitamin B12) Biosynthesis in Porphyromonas gingivalis. IDENTIFICATION AND CHARACTERIZATION OF A FUNCTIONAL CORRIN PATHWAY. J. Biol. Chem.
275: 40316-40323
[Abstract]
[Full Text]