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Journal of Bacteriology, June 2001, p. 3556-3563, Vol. 183, No. 12
Department of Molecular
Microbiology1 and Division of Infectious
Disease, Department of Pediatrics,2
Washington University School of Medicine and St. Louis Children's
Hospital, St. Louis, Missouri 63110
Received 28 December 2000/Accepted 23 March 2001
The role of proteases in pathogenesis is well established for
several microorganisms but has not been described for Yersinia enterocolitica. Previously, we identified a gene,
hreP, which showed significant similarity to proteases
in a screen for chromosomal genes of Y. enterocolitica
that were exclusively expressed during an infection of mice. We cloned
this gene by chromosome capture and subsequently determined its
nucleotide sequence. Like inv, the gene encoding the
invasin protein of Y. enterocolitica,
hreP is located in a cluster of flagellum biosynthesis
and chemotaxis genes. The genomic organization of this chromosomal
region is different in Escherichia coli, Salmonella, and
Yersinia pestis than in Y.
enterocolitica. Analysis of the distribution of
hreP between different Yersinia isolates
and the relatively low G+C content of the gene suggests acquisition by
horizontal gene transfer. Sequence analysis also revealed that HreP
belongs to a family of eukaryotic subtilisin/kexin-like proteases.
Together with the calcium-dependent protease PrcA of Anabaena
variabilis, HreP forms a new subfamily of bacterial
subtilisin/kexin-like proteases which might have originated from a
common eukaryotic ancestor. Like other proteases of this family, HreP
is expressed with an N-terminal prosequence. Expression of an
HreP-His6 tag fusion protein in E.
coli revealed that HreP undergoes autocatalytic processing at a
consensus cleavage site of subtilisin/kexin-like proteases, thereby
releasing the proprotein.
The genus Yersinia
consists of several species, three of which are considered to be
pathogens for mammals. Yersinia pestis is the etiologic
agent of plague, while Yersinia
pseudotuberculosis and Yersinia enterocolitica
primarily cause gastrointestinal syndroms. Yersinia
enterocolitica is a pathogen for humans and can cause a variety of
syndromes, including acute enteritis, mesenteric lymphadenitis, and
enterocolitis (15). All three species have a tropism for
lymphoid tissues and contain a 70-kb virulence plasmid which encodes a
system that delivers antiphagocytic effector proteins into the cytosol
of eukaryotic cells (16).
In contrast to the virulence plasmid, relatively little is known about
chromosomally borne virulence genes of Y. enterocolitica. In
addition to the genes inv and ail, which encode
proteins that enable the bacterium to adhere to and invade eukaryotic
cells (29, 39), genes for the acquisition of iron and the
synthesis of the O antigen component of lipopolysaccharide and an
enterotoxin gene have been described as chromosomally borne
virulence-associated genes (1, 13, 27, 52, 53, 59). By
signature-tagged transposon mutagenesis, chromosomal genes of Y. enterocolitica were identified that were previously not described
as required for in vivo survival. They include genes for the synthesis
of outer-membrane components, stress response, and nutrient acquisition (17). One transposon insertion was localized in
pspC, and the corresponding strain was severely attenuated
for virulence (17).
Recently, in vivo expression technology (IVET) was established as a
powerful tool to select for and identify genes that are expressed
during an infection (35, 36). To overcome the discrepancy between the availability of information about chromosomally and virulence plasmid-borne virulence genes, IVET was used with Y. enterocolitica in a mouse model of infection (58).
This study led to the identification of 45 different chromosomal loci,
designated hre for host responsive elements, that are
expressed early during an infection but not under standard laboratory
conditions. The identified hre loci were grouped according
to their predicted function or property and comprise genes important
for stress response, iron starvation response, or cell envelope
maintenance. Another group contains hre loci with
noncategorized functions, including those with unknown function or no
similarity to genes in the database (58). The same IVET
pool was also used to identify genes expressed during later stages of
infection (21). These were designated sif for
systemic infection factor. Comparison of sif and
hre genes suggests that different sets of genes are active
during different stages of infection.
After the identification of hre genes, it was important to
further characterize these genes and their products and to elucidate their role for pathogenesis. Three of four different hre
mutant strains tested showed reduced virulence in the mouse model of infection, indicating their importance for pathogenesis. One of these, hreP (previously referred to as hre-22),
showed similarity to the protease PrcA of Anabaena
variabilis (5, 37, 58). The importance of HreP for
the pathogenesis of Y. enterocolitica is clearly reflected
in the reduction of virulence of an hreP mutant strain by
both a 50% lethal dose and an in vivo survival assay
(58). While it is possible that this protease serves a housekeeping function during infection, proteases are well established as bacterial virulence factors (33, 54). There are several examples of bacterial proteases that contribute to pathogenesis by
interfering with host tissues or proteins and by inactivating key
proteins important in host defense (33).
To characterize the in vivo-expressed protease encoded by
hreP, the gene and its flanking regions were cloned and
sequenced. The genomic organization, together with the G+C content of
hreP and the distribution among different
Yersinia species, suggests that hreP was acquired
by horizontal gene transfer. This is especially interesting, as HreP
has significant similarity to eukaryotic subtilisin/kexin-like
proprotein convertases. In addition, we could show that purified HreP
undergoes autocatalytic processing of its amino-terminal prosequence.
Bacterial strains, plasmids, and media.
The Y. enterocolitica strain GY4J7, a derivative of the previously
described strain JB580v (30), is the original
cat fusion strain isolated in a screen for in vivo-expressed
genes (58). The pGY2-based plasmid pGY49, which has
oriR6K and is mobilizable, was maintained in
Escherichia coli S17-1 Cloning, subcloning, and site-directed mutagenesis.
For the
cloning of the hreP gene by chromosome capture, chromosomal
DNA of Y. enterocolitica strain GY4J7 was digested with EcoRI, ligated after the restriction enzyme was heat
inactivated, and subsequently electroporated into E. coli
S17-1
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.12.3556-3563.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
HreP, an In Vivo-Expressed Protease
of Yersinia enterocolitica, Is a New Member of the
Family of Subtilisin/Kexin-Like Proteases

and
![]()
ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
pir (31,
57). For the expression of recombinant
His6-tagged proteins, plasmid pET-24(+) (Novagen)
and the T7 RNA polymerase expressing E. coli strain ER2566
were used. All strains were grown in Luria-Bertani broth or agar plates
at 26°C (Y. enterocolitica) or 37°C (E. coli)
unless otherwise mentioned. Antibiotics were used in the following
concentrations where appropriate: ampicillin, 100 µg/ml; kanamycin,
50 µg/ml; chloramphenicol, 25 µg/ml (for E. coli) or
12.5 µg/ml (for Y. enterocolitica); and nalidixic acid, 20 µg/ml.
pir. Because EcoRI does not cut within
pGY2 (integrated on the chromosome), this should release a fragment
containing pGY2 along with flanking chromosomal sequences. Analysis of
the transformants revealed a plasmid containing a fragment of captured
chromosomal DNA of approximately 4.3 kb that was named pGY49. The
insert in this fragment was subcloned as a ClaI fragment in
pWSK29 (55), resulting in plasmid pGY50, and subsequently
sequenced. For the recombinant expression of the hreP gene
as a His6 tag fusion protein, PCR amplification
with pGY50 as template and primers GH-P8
(5'-GGAATTCTATTAAAGGGAAATTAAAATG-3') and GH-P4-3
(5'-CCGCTCGAGTTTATGGCACCCTACCATTTC-3') was
performed (EcoRI and XhoI linkers, respectively,
are underlined). The 1,684-nucleotide (nt) PCR product, which contains
the entire hreP coding region plus an additional 18 nt
upstream of the start codon, was digested with EcoRI and
XhoI and ligated into the EcoRI- and
XhoI-restricted vector pET-24(+), resulting in plasmid
pET-P8/P4-3. The correct sequence of the fragment was confirmed by
sequencing. Site-directed mutagenesis was performed by recombination
PCR as previously described (56, 61), resulting in plasmid
pET-P8/P4-3 S471-A. Confirmation of the introduced nucleotide exchanges
was done by sequence analysis.
Southern analysis. Chromosomal DNA was purified from Yersinia, Salmonella, and E. coli strains as previously described (38) and digested with HindIII. The restricted DNA was separated by electrophoresis on a 0.8% agarose gel and subsequently transferred to a nitrocellulose membrane by the method of Southern (50). An internal fragment of the hreP gene corresponding to nt 594 to 1097 of the hreP coding region was generated by PCR amplification and used as the probe. Labeling of the probe, hybridization, and detection were done with the enhanced chemiluminescence (ECL) Southern blotting system as described by the manufacturer (Amersham Pharmacia Biotech).
Sequence analysis. DNA sequence analysis was carried out using the Applied Biosystems DNA sequencing system and the BigDye terminator cycle sequencing kit according to the manufacturer's instructions. Sequencing reactions were processed by the Washington University Protein and Nucleic Acid Chemistry Laboratory. Sequence alignments were generated with the Genetics Computer Group program Bestfit, and database searches were conducted with the Blast program.
For the amino-terminal sequence analysis of processing products, proteins were blotted on polyvinylidene difluoride membrane, stained with 0.025% (wt/vol) Coomassie brilliant blue R-250 in 40% (vol/vol) methanol and destained in 50% (vol/vol) methanol. The appropriate area of the membrane was isolated, and the N-terminal sequence of the bound protein was determined by automated Edman degradation by standard procedures by the Washington University Protein and Nucleic Acid Chemistry Laboratory.Protein expression and affinity purification.
E.
coli ER2566 containing plasmid pET-P8/P4-3 or pET-P8/P4-3 S471-A
was grown to an optical density at 600 nm of 0.6 at 37°C. After
addition of isopropyl-
-D-thiogalactopyranoside
(IPTG) to a final concentration of 0.33 mM, cells were incubated with
shaking at 25°C for 5 h to induce expression of the
HreP-His6 tag fusion protein. Cells were
pelleted, resuspended in lysis buffer (50 mM Tris-Cl [pH 8.0], 500 mM
NaCl, 10 mM imidazole, 10% glycerol, 0.1% Triton X-100), and
sonicated to break open the cells. After centrifugation, the
supernatant was applied to a Ni-nitriloacetic acid agarose column
(Qiagen) that was subsequently washed with washing buffer (50 mM
Tris-Cl [pH 8.0], 500 mM NaCl, 20 mM imidazole, 10% glycerol, 0.1%
Triton X-100) to remove nonspecifically bound proteins. The
His6 tag fusion protein was eluted with elution buffer (50 mM Tris-Cl [pH 8.0], 500 mM NaCl, 250 mM imidazole, 10%
glycerol, 0.1% Triton X-100), and five 1.5-ml fractions were collected. The purification was monitored by separating samples of each
fraction by sodium dodecyl sulfate-polyacrylamide gel electrophoresis
(SDS-PAGE) and staining with Coomassie brilliant blue.
Western blot analysis. Proteins were separated by SDS-PAGE and transferred to nitrocellulose for immunoblot analysis (26). Antipropeptide polyclonal antiserum was used at a 1:750 dilution. Anti-His monoclonal antibody was used at a 1:2,000 dilution as recommended by the manufacturer (Qiagen). Binding was detected by incubation with horseradish peroxidase-conjugated secondary antibody and with a chemiluminescent substrate (ECL; Amersham).
Protease activity assay.
The standard assay for protease
activity was performed at 37°C in 50 mM Tris [pH 8.0] and 0.5 mM
CaCl2, with various amounts of affinity-purified
HreP, depending on the preparation. BAPNA (N
-benzoyl-DL-arginine-p-nitroanilide)
was dissolved in dimethyl sulfoxide and used as a substrate at a final
concentration of 1 mM. The absorbance at 405 nm was measured to detect
the appearance of 4-nitroanilide.
Nucleotide sequence accession number. The complete sequence of hreP and surrounding DNA can be found in GenBank (accession number AF354753).
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RESULTS |
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Sequence analysis of hreP.
The nucleotide sequence of a 4.3-kb
DNA fragment from Y. enterocolitica JB580v corresponding to
the complete gene of hreP and its surrounding regions was
determined after plasmid rescue from the original cat fusion
strain GY4J7 (58). The hreP open reading frame
(ORF) comprises 1,650 nt, encoding a hypothetical protein 550 amino
acids (aa) in length with a calculated molecular weight of 60,013. A
putative Shine-Dalgarno sequence (AAGGGA) was located 7 nt upstream of
the initiation codon. The amino acid sequence of the hypothetical
protein was compared to entries in databases with the BLAST program
(2). The highest similarity was to the cyanobacterial
calcium-stimulated protease PrcA of A. variabilis (5,
37) (Fig. 1). However, significant
similarity was found to several subtilases (subtilisin-like serine
proteases) belonging to the family of eukaryotic subtilisin/kexin-like
proprotein convertases (Table 1). These
proteases are often referred to as convertases because they are
synthesized in a proform, where the amino-terminal proprotein serves as
an intramolecular chaperone that is autocatalytically cleaved off after
folding, thereby releasing the mature enzyme (6, 18).
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Genomic organization of the hreP locus. Sequence analysis of the neighboring regions of hreP revealed that hreP is located in a cluster of genes related to flagellum biosynthesis and chemotaxis. Upstream of hreP the 5' end of the divergently transcribed flhB gene of Y. enterocolitica was identified. Downstream of hreP, the cheZ, cheY, and cheB genes of Y. enterocolitica were identified by sequence identity to the corresponding genes of E. coli (identities of 67% [cheZ], 81% [cheY], and 74% [cheB], respectively). As flhBAE and cheZYB are transcribed divergently and convergently, respectively, from hreP, a polar effect of the previously described Y. enterocolitica hreP mutant that was tested for pathogenicity in the mouse model of infection (58) is unlikely.
The genomic organization of the flhBAE-cheBYZ region is arranged differently in Y. enterocolitica from that in E. coli and Salmonella (Fig. 2) (10; http://genome.wustl.edu/gsc/bacterial/salmonella.shtml). First, there is no additional ORF between the cheZ and flhB loci in E. coli or Salmonella enterica serovar Typhimurium. Second, the inv gene is located downstream of the flhBAE operon in Y. enterocolitica, followed by the flgMN genes (19). E. coli and S. enterica serovar Typhimurium have no inv gene downstream of the flhBAE operon, and flgMN is located in a different region of the chromosome. Interestingly, the genomic organization of this region is again different in Y. pestis (30; http://www.sanger.ac.uk/Projects/Y_pestis). There is no ORF with similarity to hreP in the available Y. pestis genome, neither downstream of cheZ nor upstream of flhB, and the cheBYZ operon is located elsewhere on the chromosome in comparison to flhBAE and flgMN. Furthermore, the inv gene of Y. pestis is disrupted by an IS200-like element and hence is not functional (47).
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Analysis of the distribution of hreP in different
Yersinia isolates.
We were interested in the
distribution of hreP in different pathogenic and
environmental Yersinia isolates as well as in E. coli and Salmonella species, because the genomic
organization of the hreP region of the chromosome of
Y. enterocolitica and the G+C content of the gene suggested
the acquisition of hreP by horizontal gene transfer. The
chromosomal DNA of these species was isolated and analyzed by Southern
hybridization with hreP as the probe under medium-stringency
conditions (Fig. 3). All isolates of
Y. enterocolitica tested gave a positive signal for hreP, although the serotypes that are generally considered
to be environmental isolates (O6, O7,13, and O7,19,
respectively) showed a different hybridization pattern from that of the
pathogenic strains. The other pathogenic Yersinia species
tested, Y. pestis and Y. pseudotuberculosis, did
not react with the hreP probe; this is consistent with
results from the search of the Y. pestis genome for
hreP-related sequences. Likewise, DNA from environmental isolates of Yersinia (Yersinia rohdei, Yersinia
aldovae, Yersinia frederiksenii, Yersinia intermedia, and
Yersinia kristensenii), S. enterica serovar
Typhimurium, Salmonella enterica serovar
Enteritidis, the uropathogenic E. coli strain
J96, and the wild-type E. coli strain W3110 did not
hybridize with the hreP probe. In some cases a very weak
signal could be detected with Y. kristensenii DNA under
low-stringency conditions (data not shown).
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Expression of HreP in E. coli.
To determine the
proteolytic properties of HreP, we expressed the protein with a
carboxy-terminal His6 tag from plasmid
pET-P8/P4-3 in E. coli and affinity purified it via a
Ni-nitriloacetic acid agarose column. Induction of expression with IPTG
in E. coli led to the synthesis of a polypeptide with an
apparent molecular mass of 65 kDa that could be detected in whole-cell
lysates of induced but not uninduced E. coli cells carrying
the expression plasmid. After affinity purification was done, we
detected several other polypeptides in addition to the 65-kDa
polypeptide on Coomassie-stained SDS-polyacrylamide gels, which we
first assumed to be contaminants (Fig.
4A). However, closer examination of the
molecular masses suggested that in analogy to the processing of PrcA of
A. variabilis, two of these polypeptides with apparent
molecular masses of 42 and 28 kDa, respectively, might be processing
products of HreP. To test this hypothesis, we performed Western blot
analysis using either penta-His antibody that recognizes the
carboxy-terminal His6 tag of the fusion protein
or rabbit antiserum raised against aa 1 to 184 of HreP, corresponding
to the presumed amino-terminal prosequence (Fig.
5). As expected, the penta-His antibody
recognizes the full-length HreP as well as the 42-kDa
polypeptide, which shows that this polypeptide derives from the
carboxy-terminal end of HreP. The antiserum raised against aa 1 to 184 recognizes the full-length HreP as well as the 28-kDa polypeptide.
Additionally, the protein that was used to immunize the rabbits ran at
the same size as the potential 28-kDa processing product, suggesting
that processing occurs close to the presumed site (Fig. 5). These data identify the 42- and the 28-kDa polypeptides as processing products of
the full-length HreP. This is not surprising, since sequence analysis
suggested that HreP belongs to a class of proprotein convertases which
are expressed with an amino-terminal prosequence that is usually
autocatalytically cleaved off after correct folding of the mature
enzyme.
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Autocatalytic processing of HreP. To determine if the observed cleavage is due to autocatalytic processing or to processing by another unidentified protease in the preparation, we constructed a mutant form of HreP in which the potential catalytic Ser471 is replaced by Ala. This mutant protease should no longer be able to autocatalytically cleave off its prosequence but should still be a substrate for another processing protease. Induction of expression of HreP S471-A led to the synthesis of a polypeptide with the same molecular mass as uncleaved wild-type HreP (Fig. 4B). After affinity purification, the bands previously identified as processing products could no longer be detected, suggesting that the observed processing is not the result of a cleavage mediated by another protease in the preparation. In addition, this result suggests that HreP S471-A is no longer able to undergo autocatalytic processing and that S471 is part of the catalytic triad.
Determination of the processing site of HreP. For multiple reasons, we were interested in determining the site where proprotein processing of HreP occurs. First, this should provide further evidence that the 42-kDa polypeptide detected on SDS-polyacrylamide gels is the amino-terminally truncated version of HreP. Second, we can positively identify the amino terminus of the mature enzyme. Third, we should be able to identify a preferred cleavage site which could provide clues to the potential substrate specificity of the protease. For this purpose, the affinity-purified HreP preparation was transferred to a polyvinylidene difluoride membrane, the area of the membrane corresponding to the 42-kDa polypeptide was cut out, and the sequence of the first 6 aa was determined by automated Edman degradation. The analysis identified the amino acids Thr-Ile-His-Pro-Asn-Gln, corresponding to aa 185 to 190 of HreP. Therefore, cleavage occurs between Lys184 and Thr185 of the HreP amino acid sequence, leaving Thr185 as the amino-terminal residue of the mature HreP protease. This further demonstrated that the 42-kDa polypeptide is, as expected, the processed, mature form of HreP. Mammalian proprotein convertases cleave precursor polypeptides at specific sites with the consensus motif (R/K)-(X)n-(K/R)*, where n = 0, 2, 4, or 6, X is any amino acid except Cys, and the asterisk indicates the cleavage site (41, 44, 45, 51). The cleavage site at which autocatalytic processing occurs in HreP (K-E-H-K*; aa 181 to 184 of the HreP coding sequence) is in accordance with this consensus sequence.
Protease activity assays. As HreP is capable of autocatalytically processing its amino terminus, we also examined its ability to cleave other substrates. Casein was chosen as a substrate to assay protease activity because it has an almost random three-dimensional structure and a wide range of both hydrophobic and hydrophilic sites incorporating most possible types of peptide bonds (4). However, we were not able to detect any specific hydrolysis of azocasein even after prolonged incubation was carried out with different concentrations of affinity-purified HreP at different temperatures (20 to 37°C) (data not shown). As PrcA of A. variabilis as well as other proprotein convertases are calcium dependent, we tested the possibility that trans activity of HreP is dependent on calcium. Again, we could not detect any specific hydrolysis of azocasein in the presence of 0.05 to 1 mM CaCl2. As PrcA efficiently cleaves BAPNA (5), we tested this substrate for hydrolysis by HreP, but again there was no detectable activity. Another substrate that we tested was the synthetic peptide NH2-Ile-Tyr-His-Lys-Glu-His-Lys-Thr-Ile-His-Pro-Asn-COOH, corresponding to amino acids 178 to 190 of HreP and spanning the previously identified cleavage site used for autocatalytic processing. However, we were not able to detect any specific cleavage of the peptide substrate after reversed-phase HPLC analysis. Although HreP is able to autocatalytically cleave off its prosequence, it does not appear to be active in trans against the substrates under the conditions tested.
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DISCUSSION |
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The hre genes of Y. enterocolitica are potential virulence factors, as their expression is specifically induced during an infection of mice, but not under standard laboratory conditions. The hreP gene was previously shown to be important for virulence, as an hreP mutant strain showed a 33-fold-higher 50% lethal dose and a decreased rate of survival in Peyer's patches and mesenteric lymph nodes of infected mice after 3 and 5 days postinfection (58). The role of a protease as a virulence factor is novel for Y. enterocolitica, which prompted us to examine this hre gene in more detail.
Sequencing of the whole hreP gene and its flanking regions revealed an ORF encoding a hypothetical protein with a molecular mass of approximately 60 kDa. Interestingly, the gene showed significant similarity to a class of eukaryotic proteases that belong to the family of subtilisin/kexin-like proprotein convertases. Only one prokaryotic protease, PrcA of A. variabilis, showed significant similarity. Both HreP and PrcA share typically conserved residues that have been identified by sequence alignments and by a comparison of the crystal structures of several subtilases (5, 32, 46). One of three residues that are specific for the kexin subfamily of subtilases is conserved in HreP as well as in PrcA. At the other two residues specific for the kexin subfamily, HreP and PrcA differ not only from the kexin subfamily but also from typical subtilases. We conclude that these two bacterial proteases are members of a new subfamily of subtilisin/kexin-like proteases that might have evolved from the same protease ancestor as its eukaryotic relatives. This hypothesis is especially intriguing, as the genomic organization of this region and the relatively low G+C content of hreP make an acquisition by horizontal gene transfer likely.
Horizontal gene transfer has been evoked recently especially in the context of so-called pathogenicity islands (23, 25). However, hreP cannot be considered a pathogenicity island, as it does not have most of the characteristic features. Although hreP is present in Y. enterocolitica, it is absent from the genome of other related species and has a G+C content different from the rest of the genome. It is also much smaller than a typical pathogenicity island. In addition, hreP is not associated with a tRNA locus and does not seem to carry other cryptic genes such as phage attachment sites, phage integrase genes, or plasmid origins of replication. The acquisition of genes is a widespread phenomenon in the bacterial world. In Salmonella, for example, at least three pathogenicity islands and several smaller so-called pathogenicity islets, structurally comparable to hreP, have been described (9, 22). Interestingly, some Salmonella genes that were identified by an IVET screen show an atypical base composition and may also have been acquired horizontally (14, 28). The inv gene of Y. enterocolitica also could be a horizontally acquired virulence factor, as it is located in a cluster of flagellar genes that have a different G+C content (19).
The origin of hreP remains unknown; besides PrcA of A. variabilis, the highest similarities of HreP are to eukaryotic proteases. No other protease of prokaryotic origin shows the same characteristic features; thus, it is tempting to speculate that hreP has been acquired from a eukaryotic ancestor. Horizontal gene transfer from eukaryotes to prokaryotes has been postulated, although these events are difficult to prove (48). For example, YopH and YpkA, two effector proteins of the virulence plasmid-encoded type III secretion system of Yersinia, also show similarities to eukaryotic proteins. The C terminus of YopH contains a domain that is homologous to catalytic domains of eukaryotic protein tyrosine phosphatases (11, 24), and YpkA is a protein kinase with extensive homology to eukaryotic Ser/Thr protein kinases (20).
By expressing HreP in E. coli we were able to show that HreP undergoes an autocatalytic cleavage, thereby releasing its prosequence. This was shown by determining the amino terminus of the released mature protease and by blocking processing by exchanging the catalytic Ser471 with Ala by site-directed mutagenesis. The determined cleavage site consists of a typical consensus motif of subtilisin/kexin-like proteases (41, 44, 45, 51). Although HreP shows the highest similarity to PrcA of A. variabilis, PrcA is autocatalytically processed after an Arg residue, in contrast to processing after Lys by HreP. Furthermore, the PrcA cleavage site does not appear to have a consensus sequence (R-E-F-R-Q-R*) typical for subtilisin/kexin-like proteases (5). This suggests that HreP and PrcA cleave different substrates and may also have different functions. Eukaryotic proprotein convertases cleave a wide variety of proproteins in the secretory pathway. Targets of this type of protease include peptide hormones, neuropeptides, and growth factors. These proteases also process many other proteins into their biologically active forms, thereby fulfilling an important regulatory role. Furin, a mammalian proprotein convertase with a broad range of different substrates, has been shown not only to process cellular proproteins but also to activate viral envelope glycoproteins and bacterial exotoxins like Shiga toxin, diphtheria toxin, and Pseudomonas exotoxin A (41).
Protease activity of HreP could be shown as autocatalytic processing in cis. However, we were not able to show trans activity against various substrates under different conditions. There are several possible explanations why HreP protease activity has not been detected in trans. First, the assay conditions used might not reflect conditions under which the protease is active, although they are commonly used for proteases of this class. Second, HreP might not be stable under the conditions used. We detected decreased amounts of HreP but not of HreP S471-A after prolonged storage at 4°C, although we never saw degradation of HreP during an assay, as determined by SDS-PAGE. Third, HreP activity in trans might be very specific for a certain substrate that needs to be identified.
Another possibility for why we could not detect trans activity arises from the fact that we were not able to further purify the mature HreP protease from the prosequence, even by gel filtration (G. Heusipp and V. L. Miller, unpublished results). The inhibitory effect of prosequences has been extensively studied. The prosequence can remain associated with the cleaved protease and inhibit its activity by steric occlusion of the active site until a further activation step occurs (7, 34, 49, 60). Mammalian proprotein convertases are autocatalytically processed in the endoplasmic reticulum. Under these conditions, the protease is not activated, as the prosegment remains associated with the enzyme until it is transported through the trans-Golgi network to its final cellular destination. During this process, a change in H+ and/or Ca2+ concentrations leads to a second cleavage event that releases the prosegment and activates the enzyme (3, 12, 40, 42). The association of the prosequence with the mature enzyme after autocatalytic cleavage serves as a mechanism for the spatial and temporal regulation of the proteolytic activity. A similar mechanism can also be proposed for HreP, in which the enzyme has to be activated by a second event under conditions yet to be identified. Further analysis of this potential activation in Y. enterocolitica has been limited by the fact that in vitro conditions that lead to expression of HreP have not been identified (58). Future studies will focus on the regulation of hreP to shed further light on the signals that lead to its expression and also to investigate the activation of the enzyme.
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ACKNOWLEDGMENTS |
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We thank Ulf Sommer for help with HPLC analysis; Amy Strohmeier Gort, Peter Dube and Kristin Nelson for experimental help; and Silke Kügler for critical reading of the manuscript.
This work was supported by National Institutes of Health research grant AI42736 to V.L.M. G.H. was supported by a Forschungsstipendium of the DFG (He3079/1-1).
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FOOTNOTES |
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* Corresponding author. Mailing address: Department of Pediatrics, Washington University School of Medicine, Campus Box 8208, 660 S. Euclid Ave., St. Louis, MO 63110-1093. Phone: (314) 286-2891. Fax: (314) 286-2896. E-mail: virginia{at}borcim.wustl.edu.
Present address: ZMBE, Institut für Infektiologie, 48149 Münster, Germany.
Present address: Department for Food Science and Technology,
University of California, Davis, CA 95616.
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