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Journal of Bacteriology, July 2001, p. 3958-3966, Vol. 183, No. 13
Department of Microbiology and Molecular
Genetics and Center for the Study of Emerging and Re-emerging
Pathogens, University of Texas Medical School, Houston, Texas 77030
Received 23 January 2001/Accepted 17 April 2001
A cosmid library of DNA from colicin Js-sensitive enteroinvasive
Escherichia coli (EIEC) strain O164 was made in colicin
Js-resistant strain E. coli VCS257, and colicin
Js-sensitive clones were identified. Sensitivity to colicin Js was
associated with the carriage of a three-gene operon upstream of and
partially overlapping senB. The open reading frames were
designated cjrABC (for colicin Js receptor), coding for
proteins of 291, 258, and 753 amino acids, respectively.
Tn7 insertions in any of them led to complete resistance to colicin Js. A near-consensus Fur box was found upstream of cjrA, suggesting regulation of the cjr
operon by iron levels. CjrA protein was homologous to iron-regulated
Pseudomonas aeruginosa protein PhuW, whose function is
unknown; CjrB was homologous to the TonB protein from
Pseudomonas putida; and CjrC was homologous to a
putative outer membrane siderophore receptor from Campylobacter jejuni. Cloning experiments showed that the cjrB
and cjrC genes are sufficient for colicin Js
sensitivity. Uptake of colicin Js into sensitive bacteria was dependent
on the ExbB protein but not on the E. coli K-12 TonB and
TolA, -B, and -Q proteins. Sensitivity to colicin Js is positively
regulated by temperature via the VirB protein and negatively controlled
by the iron source through the Fur protein. Among EIEC strains, two
types of colicin Js-sensitive phenotypes were identified that differed
in sensitivity to colicin Js by 1 order of magnitude. The difference in
sensitivity to colicin Js is not due to differences between the
sequences of the CjrB and CjrC proteins.
Some strains of Escherichia
coli and related members of the family
Enterobacteriaceae produce antibacterial proteins called colicins (6, 34, 41). Colicins are active on sensitive strains of the same family and preferably on strains within the same
species (32, 33). Besides colicin synthesis, colicinogenic strains code for immunity proteins that specifically inhibit the action
of the colicin types they produce. Colicin synthesis is believed to
provide producer bacteria a selective advantage over noncolicinogenic,
sensitive strains (35). Genes for colicin synthesis are
plasmid encoded, with the possible exception of bacteriocin 28b of
Serratia marcescens (44).
Growth-inhibitory effects of colicins are limited to sensitive
bacterial strains which possess specific outer membrane receptor proteins. Colicins bind to bacterial receptors whose primary function is often to facilitate the uptake of nutrients (e.g., vitamin B12, ferric siderophores). In this respect,
colicins resemble bacteriophages, which also appropriate receptor
proteins to infect a sensitive bacterium. Several outer membrane
receptors were identified as colicin receptors (e.g., BtuB, FepA, FhuA,
Tsx, and OmpA). Some colicins show additional dependence on
lipopolysaccharide molecules and outer membrane porins (12,
40). This complex dependence on outer membrane components is
characteristic for colicins taken up by the Tol system. Ton-dependent
colicins bind to individual outer membrane proteins, with the exception
of colicins 5 and 10, which show dependence on both the Tsx and TolC
outer membrane proteins (28, 29). Receptor binding is
followed by translocation of the colicin molecule through the cell
envelope by either the Ton or the Tol system (4, 43).
Colicin Js is a polypeptide toxin (molecular mass, 10.4 kDa) originally
identified as a product of Shigella sonnei (1). Compared to other colicins, colicin Js has a unique antimicrobial spectrum, being active only on enteroinvasive serotypes of E. coli and Shigella strains able to produce a positive
reaction in the Serény test, an experimental keratoconjunctivitis
in rabbits or guinea pigs. Enteroinvasive E. coli (EIEC)
serotypes not sensitive to colicin Js were reported to be negative in
this enteroinvasiveness test (19).
Some Shigella and EIEC strains cause a bacillary dysentery
characterized by bacterial invasion of the colonic and rectal mucosa. The enteroinvasiveness phenotype of these strains is associated with a
230-kb virulence plasmid coding for the majority of genes that
contribute to the enteroinvasiveness phenotype (38). Entry of bacteria into host cells is followed by lysis of the internalized vacuole, bacterial growth in the cytoplasm, and infection of adjacent cells in the intestinal mucosa (37, 39). The
enteroinvasiveness phenotype is regulated by the
virF-virB regulatory cascade, which is expressed
at 37°C and repressed at 30°C (11).
This communication describes the identification of EIEC genes
coding for colicin Js sensitivity, iron and temperature regulation of
these genes, and comparisons of the primary structures of the genes
from two EIEC strains and one Shigella strain.
Media.
Bacterial strains were grown at 37°C in TY medium
containing (per liter) 8 g of Bacto Tryptone (Difco Laboratories),
5 g of yeast extract, and 5 g of NaCl (pH 7). For selection
and maintenance of plasmids, we added (per milliliter of liquid medium
or 1.5% [wt/vol] TY agar) 25 µg of chloramphenicol, 100 µg of
ampicillin, or 25 µg of kanamycin.
Isopropyl- Bacterial strains and plasmids.
The bacterial strains and
plasmids used in this study are listed in Table
1. Colicin Js producer strain S. sonnei type 7, colicin Js-sensitive S. sonnei 17 (colicin type 6), and EIEC strain O164 were kindly provided by J.
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.13.3958-3966.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
The Iron- and Temperature-Regulated
cjrBC Genes of Shigella and
Enteroinvasive Escherichia coli Strains Code for
Colicin Js Uptake
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ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
-D-thiogalactopyranoside (IPTG) and
5-bromo-4-chloro-3-indolyl-
-D-galactopyranoside (X-Gal)
were used at 0.5 mM and 80 µg ml
1,
respectively. The iron-chelating compound 2,2'-dipyridyl was added to
TY plates at 0.2 mM. Campylobacter strains were grown on Campylobacter CSM Selective Medium plates (Becton Dickinson Biosciences, Sparks, Md.).
marda, Brno, Czech Republic. Strains of the genera
Acinetobacter, Campylobacter,
Enterobacter, Pasteurella, Klebsiella,
Morganella, Pseudomonas, Salmonella, Serratia, and Shigella, as well as EIEC and
enteropathogenic E. coli strains, were from the
strain collection of B. Murray, University of Texas Houston Medical
School. Mannheimia, Yersinia, two
Pseudomonas strains, and one Pasteurella strain
were from the Czech Collection of Microorganisms, Brno, Czech Republic.
Vibrio cholerae and some Salmonella strains were
from the strain collection of this laboratory. The E. coli,
EIEC, and Shigella strains used in this study are shown in
Table 1. Campylobacter strains were grown at 42°C on TY or
CSM plates under microaerophilic conditions generated by the CampyPak
Microaerophilic System (Becton Dickinson Biosciences).
TABLE 1.
Bacterial strains, plasmids, and bacteriophage used in
this study
Crude colicin preparations.
Cells from the TY cultures of
colicinogenic strains (producers of colicins Js, 5, 10, E2, and U)
induced by mitomycin C (0.5 µg ml
1; Sigma)
were harvested, resuspended in distilled water, washed, and sonicated.
The sonicates were used as crude colicins. E. coli LMG194,
containing a plasmid (pDS83) with the cja gene under the control of the lac promoter, was induced at an optical
density at 600 nm (OD600) of 0.4 by addition of 1 mM IPTG and then cultivated for an additional 4 h at 37°C. Cells
were subsequently harvested, washed, and lysed.
Determination of sensitivity to colicin Js and colicin activity assays. Colicin Js producer bacteria were inoculated onto agar plates with a single stab and subsequently grown for 48 h at 37°C. After that, plates were exposed to chloroform vapor for 30 min to lyse the producer bacteria and then overlaid with 100 µl of colicin Js-sensitive bacteria in 3 ml of 0.75% (wt/vol) TY agar. After overnight cultivation at 37°C, bacteria sensitive to colicin Js formed a zone of growth inhibition around the colicin Js producer.
Colicin Js activity was tested by spotting 10-fold dilutions of colicin-containing crude cell lysates on agar plates seeded by sensitive bacteria; TY agar plates were overlaid with 3 ml of 0.75% (wt/vol) TY agar with 100 µl of an overnight culture of indicator bacteria. Each experiment was performed at least three times, and the data reported are averages of three independent measurements. Colicin dilutions causing both clear zones (complete inhibition of sensitive bacteria) and turbid zones (any detectable form of growth inhibition) were used for description of colicin activity.TnphoA transposon mutagenesis.
EIEC strain
O164 was grown to an OD600 of 0.5 and mixed with
TnphoA at a multiplicity of infection equal to 1. Phages
were allowed to attach to sensitive bacteria for 30 min at 30°C, and the bacteria were subsequently grown for 4 h at 30°C. Aliquots were plated on TY plates supplemented with kanamycin. Colicin Js-resistant colonies were isolated, and their resistance phenotype was
tested with Tol-dependent colicin E2 and Ton-dependent colicin 5 or 10. Strain O164Tn10, which is resistant to colicin Js, was used for further
characterization. Genomic DNA of EIEC strain O164Tn10 with a
TnphoA insertion was digested with BamHI, cutting once inside TnphoA, as well as in the flanking bacterial
DNA. To allow PCR amplification, ends of digested DNA were ligated to
each other and ligation products were used for subsequent PCR amplification with primers GW472 and GW473 by using priming sites on
TnphoA and directing DNA synthesis toward the outside of
TnphoA. The PCR product was cloned in pCR2.1 and sequenced,
and the point of TnphoA insertion was identified.
Construction of a genomic library of EIEC strain O164 in E. coli VCS257 and screening for colicin Js sensitivity. Genomic DNA of EIEC strain O164 was partially digested with restriction enzyme Sau3AI, and 25- to 50-kb fragments were isolated and ligated into cosmid pBeloBAC11. Two microliters of ligation solution was mixed with 25 µl of Gigapack III Gold Packaging Extract (Stratagene) and incubated at room temperature (22°C) for 2 h. Subsequently, 500 µl of autoclaved SM buffer (5.8 g of NaCl, 2.0 g of MgSO4 · 7H2O, 50 ml of 1 M Tris-HCl [pH 7.5], and 5.0 ml of 2% [wt/vol] gelatin in 1 liter of deionized water) was added to tubes together with 20 µl of chloroform. The cosmid packaging reaction mixture was then diluted 10-fold, and 25 µl was mixed with 25 µl of VCS257 bacteria, resuspended in 10 mM MgSO4 at an OD600 of 0.5, and cultivated at room temperature for 30 min. For expression of antibiotic resistance, 200 µl of TY medium was subsequently added and bacteria were cultivated for 1 h at 37°C, inoculated onto TY plates supplemented with chloramphenicol, and incubated overnight at 37°C. Individual colonies (more than 1,000) were picked, and their sensitivity to colicin Js was tested by streaking them across the region of a TY plate containing dried crude colicin Js. Strains showing inhibition of growth in the colicin Js-containing region were tested for colicin Js sensitivity by using a colicin activity assay.
Southern blot analyses. Chromosomal or plasmid DNA was digested with EcoRI or HindIII and electrophoresed on a 0.8% agarose gel. DNA was subsequently transferred to a nylon membrane by a standard capillary method. The probes used in Southern blot analyses were prepared by using a Gene Images CDP-Star detection module (Amersham Pharmacia Biotech), and the fluorescein-labeled probes were detected with anti-fluorescein-alkaline phosphatase conjugate. Blocking, hybridization, and detection of hybridized probe were performed in accordance with the manufacturer's recommendations.
Restriction analysis. Standard methods were used for DNA isolation, restriction endonuclease analysis, ligation, and transformation of plasmid DNA (36).
Recombinant DNA methods.
Plasmids were isolated and cells
were transformed by standard techniques. PCR products were cloned into
vector pCR2.1 or pCR2.1-TOPO in accordance with the manufacturer's
(Invitrogen) recommendations. Cloning in other vectors was done after
restriction digestion of both plasmid (cosmid) DNA and target DNA.
Insert DNA was sequenced by using the Taq Dye-deoxy
Terminator method and a model 377 DNA sequencing system (Applied
Biosystems, Foster City, Calif.). The PCR primers used in this study
are shown in Table 2.
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In vitro transposition. For cosmid mutagenesis, an in vitro Tn7 transposition system (GPS-1 Genome Priming System; New England Biolabs) was used in accordance with the manufacturer's recommendations.
Computer-assisted sequence analysis. Computer-assisted sequence analysis was performed by using programs in the Genetics Computer Group (Madison, Wis.) software package. ProtParam at ExPASy was used for calculations of theoretical polypeptide molecular weight, isoelectric point, etc. Signal sequence prediction (signalp) and protein localization (psort) programs were used.
Nucleotide sequence accession numbers. The nucleotide sequences reported in this study have been deposited in the GenBank database under accession numbers AF283288 to AF283294.
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RESULTS |
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Identification of the region conferring colicin Js sensitivity. A colicin Js-sensitive strain, EIEC strain O164, was subjected to TnphoA transposon mutagenesis, and colicin Js-resistant colonies were isolated. Strains tolerant to colicin Js, defective in translocation of colicin Js (e.g., exbB mutants), were excluded by testing for sensitivity to colicins 5 and 10. A strain specifically resistant to colicin Js was identified. The point of the TnphoA insertion was identified by DNA sequencing of plasmid pDS144 (see Materials and Methods and Table 1). The insertion was localized 26 nucleotides upstream of the start codon of senB (23). The senB gene codes for the TieB product, which may have some role in enterotoxin production by EIEC strains. However, cloning of senB into pCR2.1 (pDS154) was not associated with acquisition of colicin Js sensitivity.
Because the gene (or genes) for the colicin Js receptor could be near senB, another approach was undertaken. A cosmid library of DNA from sensitive strain E. coli O164 was made in resistant strain E. coli VCS257, and eight colicin Js-sensitive clones were identified. In all of them, the senB gene was detected. The restriction map of one cosmid, pDS150, with a 40-kb insert from EIEC strain O164 in pBeloBAC11 conferring sensitivity to colicin Js is shown in Fig. 1. Cosmid DNA of pDS150 was subcloned into the pBluescript SK(+) plasmid by using EcoRI and PstI restriction sites, resulting in plasmids pDS173, pDS174, pDS175, pDS177, pDS179, pDS180, and pDS186 (Fig. 1). The ends of the inserts were sequenced.
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Cloning of cjr genes.
To confirm the role of
the cjr genes as colicin Js receptor determinants and to
identify the gene(s) coding for the Js receptor, cjr genes
were subcloned into two separate compatible plasmids. Since a role for
downstream gene cjrC in colicin Js sensitivity was more
probable than one for cjrA and cjrB,
cjrC was cloned in a separate plasmid, pPD101, resulting in
pDS215, while the cjrAB genes were cloned in pCR2.1-TOPO
(pDS213). Clones containing cjrC or cjrAB alone
did not acquire sensitivity to colicin Js. However, E. coli
BL21 with pDS213 and pDS215 was fully sensitive to colicin Js,
indicating that the cjrC gene must be present with cjrA, cjrB, or both. Deletions in pDS213 were
prepared in cjrA (pDS222; 0.1-kb intragenic deletion of
cjrA) or cjrB (pDS221; 0.3-kb intragenic deletion
cjrB) and tested with cjrC. The results are
summarized in Table 4 and show that the
cjrB and cjrC genes are sufficient for colicin Js
sensitivity.
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Uptake of colicin Js by sensitive bacteria.
To test whether
colicin Js is taken up by the Ton or Tol system, we examined the
sensitivities of different E. coli mutants to colicin Js.
Because of the unique antimicrobial spectrum of colicin Js, E. coli mutants were transformed with pDS146, a cosmid with a DNA
fragment from EIEC strain O164 that confers sensitivity to colicin Js.
The results are summarized in Table 5. An
exbB mutant was insensitive to colicin Js, while
tonB mutants and all tested tol mutants were
sensitive to an extent similar to that of control strain E. coli 5K(pDS146). Introduction of the E. coli K-12-derived tonB gene (cloned on plasmid pDS282) into
strain E. coli GUC6 tonB(pDS146) resulted in a
10-fold decrease in colicin Js sensitivity (Table 5). This fact is
consistent with decreased iron starvation as a result of
complementation of tonB function.
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Sensitivities of indicator strains to colicin Js at different
temperatures.
Expression of genes specific for EIEC and
Shigella strains was shown to be temperature regulated
(11). The enteroinvasiveness phenotype is observed at
37°C but not at 30°C. We tested the sensitivities of colicin Js
indicator strains to colicin Js at different temperatures. The results
are summarized in Table 6. S. sonnei 17 was most sensitive to colicin Js at 37°C, less
sensitive at 30°C, and even less sensitive at 22°C. The decrease in
colicin Js sensitivity was most obvious in the decrease in the dilution
causing complete growth inhibition of the indicator bacteria (clear
zones of growth inhibition). At 22°C, no clear zones were formed.
Similar results were obtained with EIEC strain O164, where the decrease
in sensitivity was even greater. EIEC strain O143 showed results
similar to those of EIEC strain O164, with lower initial sensitivity to
colicin Js. On the other hand, the sensitivity of E. coli 5K
to colicin U was not changed when it was grown at 37 or at 22°C.
E. coli 5K(pDS146) showed the same sensitivity to colicin Js
at all of the temperatures tested, indicating that the uptake of
colicin Js was not regulated in this non-EIEC strain and that the
growth-inhibitory activity is not affected by temperature.
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Role of the virB gene in regulation of sensitivity to colicin Js. Regulation of colicin Js sensitivity by temperature was not observed in the E. coli 5K strain with the cjr operon on cosmid pDS146. Since many of the genes responsible for the enteroinvasiveness phenotype were shown to be regulated by the VirB protein (11), we tested the sensitivities of strains carrying cloned virB to colicin Js at different temperatures. By using PCR amplification, we cloned virB from EIEC strain O143(pDS253) (Tables 1 and 2). When cloned in the pCR2.1-TOPO plasmid, the virB gene was oriented under the control of the T7 promoter. Although the EIEC strains did not contain T7 RNA polymerase, "background" transcription of the virB genes in this high-copy-number plasmid was sufficient to produce increased colicin Js sensitivity. The EIEC O143 strain grown at 25°C was at least 2 orders of magnitude less sensitive to colicin Js than when it was grown at 37°C. The same strain with the virB gene in plasmid pDS253 grown at 25°C was as sensitive to colicin Js as EIEC strain O143 grown at 37°C. No effect of pDS253 was observed for EIEC strain O143 grown at 37°C. The sensitivity to colicin Js was thus regulated by the virB gene, and the regulatory effect of cloned virB was detectable only when bacteria were grown at room temperature. At this temperature, the VirF-VirB regulatory cascade of enteroinvasive bacteria was shown to be turned off (11). Sequencing of the virB gene from EIEC strain O143 (accession no. AF283290) revealed a DNA sequence identical to that previously described for virB from Shigella flexneri (2).
To more closely characterize the promoter region of the cjr genes, we tested the increase in sensitivity to colicin Js after the introduction of virB in pDS253 into E. coli 5K carrying pDS146 or pDS219. pDS219 is the pDS150 cosmid with a Tn7 insertion 24 bp upstream from the Fur box. The results are shown in Table 7. Introduction of the virB gene on pDS253 increased the sensitivity of strains with cosmid pDS146 by 1 order of magnitude. In contrast, the sensitivity of strain 5K(pDS219) remained the same with or without pDS253. These results indicate that the site of interaction between the cjr promoter and the VirB protein was in the region of the Tn7 insertion in pDS219 or further upstream.
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Sensitivity of E. coli strains to colicin Js under
iron-depleted conditions.
To test the hypothesis that
cjr genes are regulated by the Fur protein, we determined
the sensitivities of bacteria to colicin Js under standard and
iron-depleted conditions (Table 8). The presence of the iron-binding compound dipyridyl increased the colicin
Js sensitivity of both EIEC strains, despite their different sensitivities to colicin Js in the presence of iron. Under iron-limited conditions, they reached the same sensitivity. The same sensitivity to
colicin Js under iron-depleted conditions was observed also for
E. coli strains BL21 and 5K transformed with cosmids with the cjr operon (pDS146 and pDS153, respectively). The
difference between the sensitivities of EIEC strains O164 and O143 to
colicin Js was thus likely due to a difference between the basal levels of iron regulation of the cjr operon in these strains.
Increased colicin Js sensitivity was observed for E. coli
BN4020 fur(pDS146) under standard conditions (Table 8),
indicating negative transcriptional regulation of the cjr
operon by the Fur protein.
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Sensitivities of different gram-negative pathogenic bacterial
strains to colicin Js.
Since cjrBC showed homology to
protein products from other bacteria, we tested the sensitivities of
some gram-negative bacteria to colicin Js (Table
9). Despite the similarity of CjrBC
proteins to gene products of other bacteria, no bacterial strains other than EIEC and Shigella strains were found to be sensitive to
Js. The action of colicin Js seems to be specific for EIEC and
Shigella strains, resembling the narrow inhibition spectrum
of other colicins. Three out of six EIEC strains sensitive to colicin
Js were as highly sensitive to colicin Js as EIEC strain O164; the
other three were less sensitive to colicin Js (as sensitive as
EIEC strain O143). EIEC strains thus appear to have two types of
colicin Js sensitivity phenotype (data not shown).
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Sequence homology of CjrB and CjrC from two EIEC strains and S. flexneri The cjrBC genes from EIEC strain O143 and S. flexneri #1 were PCR amplified by using the TonBU-TonBL and HasRU-HasRL primer pairs (Table 2), respectively. The PCR products were subsequently sequenced, and the sequences were compared to the cjrBC sequence from EIEC strain O164. Since PCR primers recognizing the first 27 and last 24 nucleotides of cjrB were used for cjrB amplification from bacterial DNA, minor changes in primer binding sequences would not be detected. The cjrB gene from EIEC strain O143 (accession no. AF283291) differed from cjrB of EIEC strain O164 by one base pair, which does not change the amino acid sequence of CjrB. cjrB from S. flexneri #1 (accession no. AF283292) differed from the cjrB gene from EIEC strain O164 by two base pairs, but this does not change any of the amino acids of CjrB. In the case of cjrC, primers recognizing the first 15 nucleotides and primers binding downstream of cjrC were used for PCR amplification. The cjrC gene from EIEC strain O143 (accession no. AF283293) was completely identical to cjrC of EIEC strain O164. cjrC from S. flexneri #1 (accession no. AF283294) differed from cjrC of EIEC strain O164 by two nucleotides, changing one amino acid (T734 to S734). Since the CjrB and CjrC proteins from EIEC strains O164 and O143 were identical, the difference between the sensitivities of the two strains to colicin Js was not due to differences between their cjrCB genes.
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DISCUSSION |
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Independent approaches identified the region involved in colicin Js sensitivity near and upstream from the senB gene. senB was previously identified in a cosmid clone with DNA from EIEC strain EI34 (23). The senA gene, located on the same cosmid, was shown to be encoded on the large virulence plasmid in EIEC and Shigella strains (23). Although the distance between the senA and senB genes is not known, a polar effect on senA of a TnphoA insertion into the senB gene was proposed (23). However, we did not find the senA gene in an 8-kb region downstream from senB (data not shown). This might reflect a more than 8-kb distance between the sen genes, or it might be explained as a result of EIEC strain differences. The hybridization pattern of the cjrB gene was found to be the same as that of the plasmid-encoded virB gene and different from that of the chromosome-encoded tonB gene. These data are consistent with the localization of the cjr operon on the large virulence plasmid of this enteroinvasive strain. The cjr genes were found to be flanked on both ends by direct repeats and sequences producing significant similarity to bacterial insertion sequences, suggesting DNA rearrangements near the cjr genes.
Tn7 in vitro mutagenesis of cosmid DNA revealed three cjr genes in a 4-kb region. Insertion of Tn7 into any of these genes or into the promoter region upstream of cjrA resulted in complete loss of sensitivity to colicin Js. Since cloning of cjr genes showed that cjrB and cjrC are sufficient to mediate colicin Js sensitivity, insertion of Tn7 into cjrA likely led to colicin Js resistance due to a polar effect. CjrA was homologous to an iron-regulated hypothetical protein from P. aeruginosa. The function of CjrA protein remains unknown. The presence of an N-terminal lipoprotein signal sequence in CjrA suggests that the protein is exported from the cell cytoplasm. Based on sequence predictions, CjrA might be an inner membrane lipoprotein.
CjrB showed similarities to TonB proteins from some gram-negative pathogens, and in accordance with this, the CjrB protein was predicted to be a periplasmic protein anchored to the inner membrane. Colicin Js uptake requires at least one component of the Ton system, protein ExbB. Since E. coli tonB strains with cjrBC genes are fully sensitive to colicin Js, CjrB appears to be an EIEC-specific TonB protein homolog.
CjrC is similar to outer membrane receptors involved in siderophore or heme binding by gram-negative bacteria. Based on sequence similarities and sequence prediction, CjrC appears to be an outer membrane receptor for colicin Js. Ton-dependent colicins (group B) were shown to have a pentapeptide sequence near the N terminus called the TonB box. This sequence was proposed to be responsible for interaction with the TonB protein and for Ton-dependent translocation through the cell envelope. The TonB box of colicin B is a DTMVV sequence, and its introduction into the colicin U molecule resulted in TonB-dependent uptake of colicin U (30). Similar sequences were also identified near the N termini of TonB-dependent outer membrane proteins, and their function in the receptor protein-TonB interaction was described (5, 7). The absence of the TonB box in either the colicin Js polypeptide or the CjrC protein might be explained by their functional tonB independence. Different amino acid residues of colicin Js and CjrC might be involved in the interaction with CjrB. However, no significant homology was found within colicin Js and the N terminus of CjrC.
The sensitivity of EIEC and Shigella strains to colicin Js is temperature dependent, being greater when the bacteria are cultured at 37°C. The invasion phenotype of EIEC and Shigella strains is also temperature regulated, being expressed only when the bacteria are cultivated at 37°C and disappearing at 30°C. The invasion genes located on a large virulence plasmid are regulated by the products of the virF and virB genes (2). The virB gene is activated by the virF gene product, and the VirB protein positively regulates the transcription of the majority of invasion genes (11). E. coli strains with cosmid DNA conferring colicin Js sensitivity did not show this type of temperature-dependent sensitivity, indicating that the regulatory component is specific for EIEC and Shigella strains. Indeed, introduction of the virB gene expressed from the plasmid promoter into EIEC strain O143 increased the sensitivity of this strain to colicin Js at room temperature to the same extent as culturing of the bacteria at 37°C. Moreover, colicin Js sensitivity was increased by virB even for E. coli strains with cjr genes on a cosmid. The positive regulation of the cjr operon by the virF-virB regulatory cascade might suggest the involvement of cjr genes in the invasiveness phenotype. The effect of VirB in the transcriptional activation of cjr genes was blocked by the insertion of Tn7 24 bp upstream from the Fur box. Since the VirB protein is believed to be a DNA binding protein that activates promoters by directly binding to them (11), the VirB binding site(s) may be upstream from the Fur box.
In addition to temperature regulation, transcription of cjr genes is negatively regulated by the level of available iron. This regulation is mediated by the Fur protein. The Fur binding site before the cjr genes differed by four nucleotides from the consensus Fur binding palindromic sequence (9). More recently, the Fur consensus box was reinterpreted as a combination of three repeats of the 5'NAT(A/T)AT3' motif (13). In this case, the cjr Fur box differs by three nucleotides from the Fur consensus sequence. The iron-Fur-regulated genes code for iron acquisition systems and, in many bacterial pathogens, for bacterial toxins or other virulence factors, e.g., shigella enterotoxin 1 (15). Moreover, many other genes were found to be regulated by the Fur protein, e.g., genes involved in acid shock response, defense against oxygen radicals, metabolic pathways, etc. (14). The function of the cjr operon, despite the role in colicin Js uptake, is unknown. The iron and temperature regulation of the cjrABC genes suggests the involvement of these genes in iron metabolism and/or in the enteroinvasiveness phenotype. However, genes with functions other than iron metabolism may be regulated by the Fur protein (14) and some VirB-regulated genes might be dispensable for the invasiveness phenotype.
The cjrB and cjrC genes from two different serotypes of EIEC strains and from S. flexneri are very similar to each other, differing by one or two base pairs per gene. The cjrB genes in all three strains and cjrC in two EIEC strains code for identical proteins, while cjrC from S. flexneri #1 differs by one amino acid residue. Both the cjrB and cjrC genes from EIEC strains are more related to each other than to cjrBC from Shigella.
Among the 120 strains of 16 species of gram-negative bacteria, only EIEC and Shigella strains were found to be sensitive to colicin Js. The presence of the cjr operon is thus likely to be specific for bacteria with the enteroinvasiveness phenotype. The high specificity of the lethal action of colicin Js, which is restricted to EIEC and Shigella strains, resembles the narrow antimicrobial spectra described for other colicins (41). Among the sensitive strains, two types of colicin Js sensitivity phenotype, differing in sensitivity to colicin Js by 1 order of magnitude, were found. EIEC strains O164 and O143, which differ in colicin Js sensitivity, code for identical CjrB and CjrC proteins and have identical sequences in the promoter regions. The different levels of sensitivity of the two strains to colicin Js might be due to differences in the regulation of cjr genes and/or other differences between the EIEC strains.
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ACKNOWLEDGMENTS |
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We thank J.
marda for S. sonnei producer
and indicator strains and V. Braun for tol and
exb strains.
This work was partly supported by a grant from the Grant Agency of the Czech Republic (310/98/0083).
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FOOTNOTES |
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* Corresponding author. Mailing address: Department of Microbiology and Molecular Genetics, University of Texas Medical School, 6431 Fannin St., Houston, TX 77030. Phone: (713) 500-6083. Fax: (713) 500-5499. E-mail: george.weinstock{at}uth.tmc.edu.
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REFERENCES |
|---|
|
|
|---|
| 1. | Abbott, J. D., and R. Shannon. 1958. A new method for typing Shigella sonnei using colicin production as a marker. J. Clin. Pathol. 11:71-77. |
| 2. | Adler, B., C. Sasakawa, T. Tobe, S. Makino, K. Komatsu, and M. Yoshikawa. 1989. A dual transcriptional activation system for the 230 kb plasmid genes coding for virulence-associated antigens of Shigella flexneri. Mol. Microbiol. 3:627-635[CrossRef][Medline]. |
| 3. | Bitter, W., J. Tommassen, and P. J. Weisbeek. 1993. Identification and characterization of the exbB, exbD and tonB genes of Pseudomonas putida WCS358: their involvement in ferric-pseudobactin transport. Mol. Microbiol. 7:117-130[CrossRef][Medline]. |
| 4. | Braun, V. 1995. Energy-coupled transport and signal transduction through the gram-negative outer membrane via TonB-ExbB-ExbD-dependent receptor proteins. FEMS Microbiol. Rev. 16:295-307[CrossRef][Medline]. |
| 5. | Braun, V., K. Gunter, and K. Hantke. 1991. Transport of iron across the outer membrane. Biol. Metals 4:14-22[CrossRef][Medline]. |
| 6. | Braun, V., H. Pilsl, and P. Gross. 1994. Colicins: structures, modes of action, transfer through membranes, and evolution. Arch. Microbiol. 161:199-206[Medline]. |
| 7. |
Cadieux, N., and R. J. Kadner.
1999.
Site-directed disulfide bonding reveals an interaction site between energy-coupling protein TonB and BtuB, the outer membrane cobalamin transporter.
Proc. Natl. Acad. Sci. USA
96:10673-10678 |
| 8. | Deckert, G., P. V. Warren, T. Gaasterland, W. G. Young, A. L. Lenox, D. E. Graham, R. Overbeek, M. A. Snead, M. Keller, M. Aujay, R. Huber, R. A. Feldman, J. M. Short, G. J. Olson, and R. V. Swanson. 1998. The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392:353-358[CrossRef][Medline]. |
| 9. | de Lorenzo, V., F. Giovannini, M. Herrero, and J. B. Neilands. 1988. Metal ion regulation of gene expression. Fur repressor-operator interaction at the promoter region of the aerobactin system of pColV-K30. J. Mol. Biol. 203:875-884[CrossRef][Medline]. |
| 10. | Dersch, P., H. Fsihi, and E. Bremer. 1994. Low-copy-number T7 vectors for selective gene expression and efficient protein overproduction in Escherichia coli. FEMS Microbiol. Lett. 123:19-26[CrossRef][Medline]. |
| 11. | Dorman, C. J., and M. E. Porter. 1998. The Shigella virulence gene regulatory cascade: a paradigm of bacterial gene control mechanisms. Mol. Microbiol. 29:677-684[CrossRef][Medline]. |
| 12. | El Kouhen, R., A. Hoenger, A. Engel, and J. M. Pages. 1994. In vitro approaches to investigation of the early steps of colicin-OmpF interaction. Eur. J. Biochem. 224:723-728[Medline]. |
| 13. | Escolar, L., J. Pérez-Martín, and V. de Lorenzo. 1998. Binding of the fur (ferric uptake regulator) repressor of Escherichia coli to arrays of the GATAAT sequence. J. Mol. Biol. 283:537-547[CrossRef][Medline]. |
| 14. |
Escolar, L.,
J. Pérez-Martín, and V. de Lorenzo.
1999.
Opening the iron box: transcriptional metalloregulation by the Fur protein.
J. Bacteriol.
181:6223-6229 |
| 15. | Fasano, A., F. R. Noriega, D. R. Maneval, Jr., S. Chanasongcram, R. Russell, S. Guandalini, and M. M. Levine. 1995. Shigella enterotoxin 1: an enterotoxin of Shigella flexneri 2a active in rabbit small intestine in vivo and in vitro. J. Clin. Investig. 95:2853-2861. |
| 16. |
Fleischmann, R. D.,
M. D. Adams,
O. White,
R. A. Clayton,
E. F. Kirkness,
A. R. Kerlavage,
C. J. Bult,
J.-F. Tomb,
B. A. Dougherty,
J. M. Merrick,
K. McKenney,
G. Sutton,
W. Fitzhugh,
C. A. Fields,
J. D. Gocayne,
J. D. Scott,
R. Shirley,
L.-I. Liu,
A. Glodek,
J. M. Kelley,
J. F. Weidman,
C. A. Phillips,
T. Spriggs,
E. Hedblom,
M. D. Cotton,
T. R. Utterback,
M. C. Hanna,
D. T. Nguyen,
D. M. Saudek,
R. C. Brandon,
L. D. Fine,
J. L. Fritchman,
J. L. Fuhrmann,
N. S. M. Geoghagen,
C. L. Gnehm,
L. A. McDonald,
K. V. Small,
C. M. Fraser,
H. O. Smith, and J. C. Venter.
1995.
Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.
Science
269:496-512 |
| 17. |
Ghigo, J. M.,
S. Letoffe, and C. Wandersman.
1997.
New type of hemophore-dependent heme acquisition system of Serratia marcescens reconstituted in Escherichia coli.
J. Bacteriol.
179:3572-3579 |
| 18. |
Guterman, S. K., and L. Dann.
1973.
Excretion of enterochelin by exbA and exbB mutants of Escherichia coli.
J. Bacteriol.
114:1225-1230 |
| 19. | Horák, V., and J. Sobotková. 1988. Sensitivity to colicin Js, one of important characteristics of Escherichia coli strains belonging to enteroinvasive serovars. Zentbl. Bakteriol. Hyg. A 269:156-159. |
| 20. |
Idei, A.,
E. Kawai,
H. Akatsuka, and K. Omori.
1999.
Cloning and characterization of the Pseudomonas fluorescens ATP-binding cassette exporter, HasDEF, for the heme acquisition protein HasA.
J. Bacteriol.
181:7545-7551 |
| 21. |
Jarosik, G. P.,
J. D. Sanders,
L. D. Cope,
U. Muller-Eberhard, and E. J. Hansen.
1994.
A functional tonB gene is required for both utilization of heme and virulence expression by Haemophilus influenzae type b.
Infect. Immun.
62:2470-2477 |
| 22. |
Manoil, C., and J. Beckwith.
1985.
TnphoA: a transposon probe for protein export signals.
Proc. Natl. Acad. Sci. USA
82:8129-8133 |
| 23. | Nataro, J. P., J. Seriwatana, A. Fasano, D. R. Maneval, L. D. Guers, F. Noriega, F. Dubovsky, M. M. Levine, and J. G. Morris, Jr. 1995. Identification and cloning of a novel plasmid-encoded enterotoxin of enteroinvasive Escherichia coli and Shigella strains. Infect. Immun. 63:4721-4728[Abstract]. |
| 24. |
Ochsner, U. A., and M. L. Vasil.
1996.
Gene repression by the ferric uptake regulator in Pseudomonas aeruginosa: cycle selection of iron-regulated genes.
Proc. Natl. Acad. Sci. USA
93:4409-4414 |
| 25. |
O'Malley, S. M.,
S. L. Mouton,
D. A. Occhino,
M. T. Deanda,
J. R. Rashidi,
K. L. Fuson,
C. E. Rashidi,
M. Y. Mora,
S. M. Payne, and D. P. Henderson.
1999.
Comparison of the heme iron utilization systems of pathogenic vibrios.
J. Bacteriol.
181:3594-3598 |
| 26. | Parkhill, J., M. Achtman, K. D. James, S. D. Bentley, C. Churcher, S. R. Klee, G. Morelli, D. Basham, D. Brown, T. Chillingworth, R. M. Davies, P. Davis, K. Devlin, T. Feltwell, N. Hamlin, S. Holroyd, K. Jagels, S. Leather, S. Moule, K. Mungall, M. A. Quail, M. A. Rajandream, K. M. Rutherford, M. Simmonds, J. Skelton, S. Whitehead, B. G. Spratt, and B. G. Barrell. 2000. Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491. Nature 404:502-506[CrossRef][Medline]. |
| 27. | Parkhill, J., B. W. Wren, K. Mungall, J. M. Ketley, C. Churcher, D. Basham, T. Chillingworth, R. M. Davies, T. Feltwell, S. Holroyd, K. Jagels, A. Karlyshev, S. Moule, M. J. Pallen, C. W. Penn, M. A. Quail, M. A. Rajandream, K. M. Rutherford, A. VanVliet, S. Whitehead, and B. G. Barrell. 2000. The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences. Nature 403:665-668[CrossRef][Medline]. |
| 28. | Pilsl, H., and V. Braun. 1995. Novel colicin 10: assignment of four domains to TonB- and TolC-dependent uptake via the Tsx receptor and to pore formation. Mol. Microbiol. 16:57-67[CrossRef][Medline]. |
| 29. |
Pilsl, H., and V. Braun.
1995.
Evidence that the immunity protein inactivates colicin 5 immediately prior to formation of the transmembrane channel.
J. Bacteriol.
177:6966-6972 |
| 30. | Pilsl, H., and V. Braun. 1998. The Ton system can functionally replace the TolB protein in the uptake of mutated colicin U. FEMS Microbiol. Lett. 164:363-377[CrossRef][Medline]. |
| 31. |
Postle, K., and R. F. Good.
1983.
DNA sequence of the Escherichia coli tonB gene.
Proc. Natl. Acad. Sci. USA
80:5235-5239 |
| 32. | Pugsley, A. P. 1984. The ins and outs of colicins. Part I. Production and translocation across membranes. Microbiol. Sci. 1:168-175[Medline]. |
| 33. | Pugsley, A. P. 1984. The ins and outs of colicins. Part II. Lethal action, immunity and ecological implications. Microbiol. Sci. 1:203-205[Medline]. |
| 34. | Riley, M. A. 1998. Molecular mechanisms of bacteriocin evolution. Annu. Rev. Genet. 32:255-278[CrossRef][Medline]. |
| 35. | Riley, M. A., and D. M. Gordon. 1999. The ecological role of bacteriocins in bacterial competition. Trends Microbiol. 7:129-133[CrossRef][Medline]. |
| 36. | Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y. |
| 37. | Sansonetti, P. J. 1998. Molecular and cellular mechanisms of invasion of the intestinal barrier by enteric pathogens. The paradigm of Shigella. Folia Microbiol. 43:239-246. |
| 38. |
Sansonetti, P. J.,
D. J. Kopecko, and S. B. Formal.
1982.
Involvement of a plasmid in the invasive ability of Shigella flexneri.
Infect. Immun.
35:852-860 |
| 39. |
Sansonetti, P. J.,
A. Ryter,
P. Clerc,
A. T. Maurelli, and J. Mounier.
1986.
Multiplication of Shigella flexneri within HeLa cells: lysis of the phagocytic vacuole and plasmid-mediated contact hemolysis.
Infect. Immun.
51:461-469 |
| 40. |
majs, D.,
H. Pilsl, and V. Braun.
1997.
Colicin U, a novel colicin produced by Shigella boydii.
J. Bacteriol.
179:4919-4928 |
| 41. |
marda, J., and D. majs.
1998.
Colicins exocellular lethal proteins of Escherichia coli.
Folia Microbiol.
43:563-582.
|
| 42. | Studier, F. W., and B. A. Moffat. 1986. Use of bacteriophage T7-RNA-polymerase to direct selective high level expression of cloned genes. J. Mol. Biol. 189:113-130[CrossRef][Medline]. |
| 43. |
Sun, T. P., and R. E. Webster.
1987.
Nucleotide sequence of a gene cluster involved in entry of E colicins and single-stranded DNA of infecting filamentous bacteriophages into Escherichia coli.
J. Bacteriol.
169:2667-2674 |
| 44. | Viejo, M. B., D. Gargallo, S. Ferrer, J. Enfedaque, and M. Regue. 1992. Cloning and DNA sequence analysis of a bacteriocin gene of Serratia marcescens. J. Gen. Microbiol. 138:1737-1743. |
| 45. | Webster, R. E. 1991. The tol gene products and the import of macromolecules into Escherichia coli. Mol. Microbiol. 5:1005-1011[Medline]. |
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