Previous Article | Next Article ![]()
Journal of Bacteriology, August 2001, p. 4727-4736, Vol. 183, No. 16
Division of General Microbiology, Department of
Biosciences,1 and Institute of
Biotechnology,3 FIN-00014 University of
Helsinki, and National Public Health Institute (KTL), FIN-00300
Helsinki,2 Finland
Received 27 December 2000/Accepted 30 May 2001
A novel fimbrial type in Escherichia coli was
identified and characterized. The expression of the fimbria was
associated with the O18acK1H7 clonal group of E. coli,
which cause newborn meningitis and septicemia when grown at low
temperature; hence, it was named the Mat (meningitis associated and
temperature regulated) fimbria. The fimbriae were purified from a
fimA::cat sfaA::Gm
fliC::St derivative of the O18K1H7
isolate E. coli IHE 3034. The purified Mat fimbrillin
had an apparent molecular mass of 18 kDa and did not serologically
cross-react with the type 1 or S fimbria of the same strain. The
matB gene encoding the major fimbrillin was cloned from
the genomic DNA of the fimA::cat
sfaA::Gm fliC::St derivative
of IHE 3034. The predicted MatB sequence was of 195 amino acids,
contained a signal sequence of 22 residues, and did not show
significant homology to any of the previously characterized fimbrial
proteins. The DNA sequence of matB was 97.8% identical to a region from nucleotides 17882 to 18469 in the 6- to 8-min region
of the E. coli K-12 chromosome, reported to encode a
hypothetical protein. The 7-kb DNA fragment containing
matB of IHE 3034 was found by restriction mapping and
partial DNA sequencing to be highly similar to the corresponding region
in the K-12 chromosome. Trans complementation of the
matB::cat mutation in the IHE
3034 chromosome showed that matB in combination with
matA or matC restored surface expression
of the Mat fimbria. A total of 27 isolates representing K-12 strains
and the major pathogroups of E. coli were analyzed for
the presence of a matB homolog as well as for expression
of the Mat fimbria. A conserved matB homolog was found in 25 isolates; however, expression of the Mat fimbriae was detected only in the O18acK1H7 isolates. Expression of the Mat fimbria was
temperature regulated, with no or a very small amount of fimbriae or
intracellular MatB fimbrillin being detected in cells cultivated at
37oC. Reverse transcriptase PCR and complementation
assays with mat genes controlled by the inducible
trc promoter indicated that regulation of Mat
fimbria expression involved both transcriptional and
posttranscriptional events.
Numerous proteinaceous adhesins have
been detected in Escherichia coli (for recent reviews, see
references 20 and 27). These adhesins occur
in the form of fimbrial filaments or are nonfimbrial proteins of the
outer membrane. The adhesins recognize different receptor molecules on
the mammalian epithelia or extracellular matrices and function to
enable colonization of E. coli at specific ecological
niches. Many of the adhesins are associated with E. coli
isolates from specific disease manifestations and contribute to the
establishment of the infections. Examples of such disease-associated adhesins include the P fimbria of uropathogenic E. coli
(UPEC) (55) and the various adhesin types detected in
E. coli pathogroups causing diarrheal diseases (reviewed in
references 13 and 36). Some adhesin genes,
such as those encoding the mannoside-binding type 1 fimbriae
(26) and the fibronectin-binding curli (39), are present on and expressed by a large proportion of natural E. coli isolates. The type 1 fimbriae are important for the spread of
E. coli from one host individual to another (6)
and also enhance bacterial colonization in the human and animal gut and the urinary tract (20, 27). The curli are expressed at low temperature and low osmolarity and may convey a selective advantage for
E. coli in the environment and in the early phases of
intestinal tract colonization (40).
The natural populations of E. coli exhibit extensive genetic
diversity that is organized into a limited number of genetically distinct clonal groups (reviewed in reference 59). Such
widespread, homogenous clonal groups have been well characterized in
E. coli strains from separate outbreaks of disease. The
isolates in the clonal groups are characterized by several identical
phenotypic traits, such as serotype, biotype, phage type, outer
membrane protein profiles, and production of hemolysins, other toxins, specific iron-scavenging systems, and specific adhesins. Multilocus enzyme electrophoresis has shown that isolates in a given clonal group
are genetically conserved (50, 59), and the clonal groups appear sufficiently stable that they have spread into human populations on several continents. Clonal groups in pathogenic E. coli
include several UPEC clones (10, 43, 55), enteropathogenic
E. coli (EPEC), enterohemorrhagic E. coli (EHEC),
enterotoxigenic E. coli (ETEC), and enteroaggregative
E. coli (EAEC) clones (reviewed in references
13 and 35). The association of specific
adhesins with these pathogroups has resulted from horizontal gene
transfer of plasmid genes or chromosomal pathogenicity islands from
other pathogens. On the other hand, diversification of adhesin alleles may result from within-host evolution of E. coli, in which
random point mutations affect the tissue tropism of the bacterium
(52).
The O18acK1H7 isolates represent the major clonal group of E. coli associated with newborn meningitis and septicemia (MENEC) (1, 31, 51). Electrophoretic analysis of chromosomally encoded enzymes revealed that the O18acK1H7 MENEC isolates are genetically highly conserved and form a distinct clone, which is
phenotypically characterized by expression of the S and the type 1 fimbriae and a conserved outer membrane protein profile, as well as, on
the other hand, by lack of the P and the type 1C fimbriae and hemolysin
(1, 31, 51). In this report, we describe a novel fimbrial
gene that is common in E. coli isolates, including
laboratory K-12 strains, but is expressed only in O18acK1H7 MENEC.
Bacteria, growth conditions, and plasmids.
The bacterial
strains and plasmids used in this work are listed in Table
1. For expression studies, the bacteria
were cultivated in static Luria broth at 20 or 37°C and under shaking
at 37°C for other purposes. Antibiotics, when necessary, were added
at concentrations of 100 (ampicillin), 25 (chloramphenicol), 30 (gentamicin [Gm]), 75 (rifampin [Rif]), 100 (streptomycin [Sm]
and streptothricin [St]), or 12.5 (tetracycline) µg
ml
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.16.4727-4736.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
matB, a Common Fimbrillin Gene of
Escherichia coli, Expressed in a Genetically Conserved,
Virulent Clonal Group
![]()
ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results
Discussion
References
1. The antibiotics were obtained from Sigma
Chemical Co, St Louis, Mo., except for streptomycin and streptothricin,
which were a gift from Helmuth Tschäpe, Robert Koch Institute,
Wernigerode, Germany. Induction of mat genes in recombinant
E. coli strains was done with 5 µM
isopropyl-
-D-thiogalactopyranoside (IPTG) (Promega Corporation, Madison, Wis.).
TABLE 1.
E. coli strains and plasmids used in this
study
DNA techniques. Isolation of plasmid and chromosomal DNA from E. coli cells and DNA manipulations were performed by routine procedures (47). Restriction enzymes (Promega Corp., Madison, Wis., and New England Biolabs, Beverly, Mass.) were used according to the manufacturers' instructions. Cloning of IHE 3034-79 chromosomal DNA into cosmid pHC79 was done according to the manufacturer's instructions (DNA-Packaging kit; Boehringer Mannheim, Mannheim, Germany), resulting in the plasmid pMAT1. A 7-kb EcoRI fragment of pMAT1 that reacted in Southern hybridization (47) with the degenerate oligonucleotides designed on the basis of the peptide sequences obtained from MatB was subcloned into pACYC184 to give pMAT2. The DNA sequences of the degenerate oligonucleotides used in the hybridization were 5' GCIGAIGTIACIGCICAIGCIGTIGCIACITGG 3' and 5' TTIGAIGTIGCIATIGAIGGIGAI 3'. The nucleotide sequence of the DNA region encoding matA and matB in pMAT2 was determined by using a commercially available sequencing service (MedProbe AS, Oslo, Norway). The matB gene in the chromosome of clinical E. coli isolates was detected by PCR with primers designed on the basis of the sequence of the matB homolog of MG1655 (5) and DyNAzyme II DNA-polymerase (Finnzymes, Espoo, Finland) according to manufacturer's instructions. The obtained PCR products were analyzed by Southern hybridization with matB gene of E. coli IHE 3034 as a probe by using the ECL enhanced chemiluminescence direct nucleic acid labeling and detection system (Amersham Pharmacia Biotech, Amersham Place, Little Chalfont, Buckinghamshire, England) according to the manufacturer's instructions.
For expression, DNA fragments representing different regions of the mat gene cluster were amplified by PCR with Pfu polymerase (Stratagene, La Jolla, Calif.), pMAT2 as a template, and primers designed on the basis of the DNA sequence of the mat region in E. coli MG1655 (5). The forward primer contained an EcoRI restriction site, and the reverse primer contained a SalI restriction site at the 5' end. The amplified DNA fragments were cloned into the EcoRI-SalI-site of pSE380 and used in the complementation assays. For reverse transcriptase PCR (RT-PCR), total RNA from E. coli strains IHE 3034, IHE 3034-90, and MG1665 was extracted with Qiagen Rneasy kit, following the manufacturer's guidelines. The enhanced avian RT-PCR kit (Sigma) and a PTC-200 Peltier thermal cycler (MJ Research) were used to amplify mRNA by the two-step method according to the manufacturer's instructions. The same amounts of template RNA were used for comparing the mat transcripts; the amounts varied from 0.5 to 2.0 µg in different experiments. Specific primers corresponded to the following nucleotides of the E. coli MG1665 sequence available in GenBank (accession no. U73857): matA forward, 19117 to 19134; matA reverse, 18547 to 18569; matB forward, 18449 to 18469; matB reverse, 17882 to 18002; matC forward, 17807 to 17824; matC reverse, 17156 to 17176. Amplimers were separated by electrophoresis in a 1% agarose gel and stained with ethidium bromide; their relative amounts were evaluated from the gels by using the Tina (version 2.0) image analysis program (Raytest Isotopenmessgeräte Gmbh, Straubenhardt, Germany). A fimA sfaA fliC triple mutant of IHE 3034, named IHE 3034-79, was constructed by inserting the sat gene encoding streptothricin acetyltransferase from pIE934 (54) into the NcoI site within the cat gene in a fliC::cat fusion (58) cloned to the suicide plasmid pGP704 (34). The resulting plasmid was used to silence the fliC gene of the fimA::cat sfaA::Gm derivative IHE 3034-59 (45) by allelic replacement essentially as described in reference 58. A MatB-null variant of IHE3034, named E. coli IHE 3034-90, was constructed by inserting a cat cassette encoding chloramphenicol acetyltransferase from pMMS1 (58) into the Bsu36I site in matB by the same methodology described above. The correct genotypes of IHE 3034-79 and IHE 3034-90 were confirmed by Southern hybridization with fliC and sat as DNA probes for IHE 3034-79 and matB and cat for IHE 3034-90. The correct phenotypes of IHE 3034-79 and IHE 3034-90 were confirmed by agglutination in an antiserum against H7 flagella available from previous work (58) or in an antiserum against the Mat-fimbriae obtained in this study as well as by immunoelectron microscopy (IEM).Sequence comparisons. Homology searches in the databases were performed with the BLAST (available at http://www.expasy.ch/sprot/sprot-top.html) and FASTA (http://www.ebi.ac.uk/fasta3/) package programs. Comparison of MatB with other fimbrillins was done by using Align for global alignment (http: //molbiol.soton.ac.uk/compute/align.html) and SIM for local alignment (http://www.expasy.ch/tools/sim-prot.html). Prediction of the presence of stem-loop structures and signal sequences in the mat genes of MG1655 and IHE 3034 was done by using programs available at http://www.fruitfly.org/seq_tools/promoter.html, http://www.genebee.msu.su/services/rna2_reduced.html, and http://www.cbs.dtu.dk/services/SignalP/. DNA-binding motifs were identified by using the ProfileScan program at http://www.isrec.isb-sib.ch/.
Protein chemical methods. Mat fimbriae were purified from E. coli IHE 3034-79 and E. coli LE392(pMAT1) by using deoxycholate and concentrated urea (29). Prior to sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (47), the type 1 and Mat fimbriae were denaturated at low pH (33).
Protein and peptide sequencing was performed with an Applied Biosystems 494A Procise sequencer. For analysis the protein was, after SDS-PAGE, electroblotted onto a ProBlott (Applied Biosystems, Perkin-Elmer, Foster City, Calif.) membrane. For internal sequencing, the protein was digested with trypsin, the peptides generated were separated by reverse-phase chromatography, and a selected peptide was subjected to analysis (61).Immunological methods. The anti-type 1 fimbria and anti-Mat fimbria sera were obtained by immunizing rabbits according to standard procedures with the type 1 fimbriae purified from E. coli IHE 3034-8 and the Mat fimbriae purified from E. coli IHE 3034-79 and E. coli LE392(pMAT1) used as antigens. The rabbit antiserum raised against the S fimbriae of IHE 3034 was available from previous work (56). Polyclonal anti-Mat, anti-type 1, and anti-S fimbria sera were titrated against the purified type 1, S, and Mat fimbriae by enzyme-linked immunosorbent assay (ELISA) as described previously (30) with alkaline phosphatase-conjugated swine anti-rabbit immunoglobulins (Dako A/S, Denmark; diluted to 1:500) as secondary antibodies and phosphatase substrate (Sigma Diagnostics, Inc., St. Louis, Mo.) at a concentration of 1 mg/ml in diethanolamine-magnesium chloride buffer (OY Reagena AB, Kuopio, Finland). Results were recorded with a Multiscan MS ELISA reader (Labsystems OY, Helsinki, Finland). Western blotting of SDS-PAGE-separated fimbrial proteins with anti-Mat fimbria antibodies was done by routine procedures as described in reference 11.
Mat fimbria expression on E. coli strains was detected by indirect immunofluorescence according to the procedure described in reference 42. Briefly, the bacteria were immobilized on glass slides, fixed with 3.5% (wt/vol) paraformaldehyde in phosphate-buffered saline (PBS), and stained with anti-Mat fimbria antibodies diluted 1:50 and with fluorescein isothiocyanate (FITC)-labeled swine anti-rabbit immunoglobulins (Dako A/S) diluted to 1:50. Stained bacteria were mounted in nicetamid and examined in an Olympus BX50 fluorescence microscope (Olympus Optical Co., Hamburg, Germany) equipped with epi-illumination and interference filters for FITC. For detection of Mat fimbria expression by whole-cell ELISA as described in reference 8, the bacteria were immobilized onto ELISA plates (Nunc A/S, Roskilde, Denmark) for 16 h at 37°C, washed, and left to react with anti-Mat antibodies diluted from 10
2 to 10
7, and the
amount of bound antibodies was measured by ELISA as described above.
Electron microscopy. For electron microscopy, the bacteria were suspended in Luria broth and immobilized on copper grids coated with Pioloform and carbon. For negative staining, the bacteria were stained with 1% (wt/vol) potassium tungstate (pH 6.5) for 1 min. For IEM, the bacteria were left to react with anti-Mat antibodies diluted to 1:500 in PBS and 10-nm-particle-diameter gold-labeled protein A (Amersham Life Science) diluted to 1:40 and negatively stained as described above. The grids were examined in a JEOL JEM-1200EX transmission electron microscope at an operation voltage of 60 kV. The micrographs were taken at the Section of Electron Microscopy, Institute of Biotechnology, University of Helsinki.
Hemagglutination assays.
Treatment of human
O1 erythrocytes with endo-
-galactosidase,
neuraminidase, trypsin, and pronase and agglutination of the erythrocytes by E. coli 3034-79 were performed by routine
procedures (28).
Nucleotide sequence accession number. The nucleotide sequence of the 6- to 8-min region of the E. coli MG1655 chromosome (5) is available at GenBank under accession no. U73857, and the sequence of the matAB region of the E. coli IHE 3034 chromosome is available under accession no. AF325731. Identity comparisons were performed with predicted protein sequences of matB and the following adhesin genes of E. coli: MG1655 fimA (9), GenBank accession no. AAC77270; PC31 fimA (25), GenBank accession no.X00981; IHE 3034 sfaA (15), GenBank accession no. S53211; J96 papA (3), GenBank accession no. X03391, K01176, X03392, X61239, and S45610; F17 a-A (32), GenBank accession no. AF022140, M36649, and M62503; MG1655 ppdD, GenBank accession no. AE000119 and U00096; K-12 csgA (40), GenBank accession no. L04979; C921b-1 cooA (44), GenBank accession no. M58550 and M37148; cooB, GenBank accession no. X62495; and LMC10 cooC and cooD (14), GenBank accession no.X76908.
| |
RESULTS |
|---|
|
|
|---|
Purification and characterization of fimbriae from the fimA
sfaA fliC mutant derivative of E. coli IHE
3034.
The O18acK1H7 meningitis isolate E. coli IHE 3034 and the S- and type 1-fimbria-negative double mutant IHE 3034-59 have
been described earlier (15, 30, 31, 45, 51). In order to obtain a derivative that is devoid of all surface filaments, the H7
flagellin gene fliC of IHE 3034-59 was inactivated by
allelic exchange with fliC::cat::sat.
The sat cassette was positioned within the cat
DNA because it contained a suitable NcoI restriction site.
Transconjugants with the correct antibiotic markers were assessed for
flagellation by agglutination in anti-H7 antiserum, and a nonflagellate
mutant was isolated and named IHE 3034-79. The correct genotype of IHE
3034-79 was confirmed by Southern hybridization of
PvuI-digested chromosomal DNA by using fliC and the sat cassette as probes (data not shown). Transmission
electron microscopy of IHE 3034-79 cells cultivated at 20°C revealed
a lack of flagella, but, unexpectedly, showed the presence of fimbrial filaments on the bacteria (Fig. 1A). The
strain IHE 3034-79 was not agglutinated in antisera raised against the
type 1 or S fimbriae from the same strain, indicating that the strain
expressed a third fimbrial type. This fimbria had a diameter of 5 to 7 nm and was 0.4 to 5 µm in length. Because the expression of this
fimbrial type was found to be associated with the major clonal group of MENEC as well as with low temperature (see below), we named it the Mat
(meningitis associated and temperature regulated) fimbria.
|
|
|
Cloning and sequencing of mat genes. We next ligated random 40-kb fragments from the genome of 3034-79 into the cosmid cloning vector pHC79, and transfectants of E. coli LE392 expressing the Mat fimbria were identified by bacterial agglutination in anti-Mat fimbria serum and by electron microscopy. A positive recombinant was isolated, and the cosmid was named pMAT1. Cosmid pMAT1 was digested with the EcoRI restriction enzyme, and a 7-kb DNA fragment reacting in Southern hybridization with the oligonucleotide probes was identified and cloned into pACYC184, to obtain plasmid pMAT2. Electroporation of pMAT2 into E. coli LE392 gave a recombinant strain reacting with the anti-Mat-fimbria antibodies (data not shown).
An extensive homology search revealed that the amino acid sequences obtained from the Mat fimbrillin perfectly matched the predicted amino acid sequence of an open reading frame at nucleotides 17882 to 18469 in the 6- to 8-min region of the E. coli K-12 chromosome (5). This DNA encodes a hypothetical protein of 195 amino acids, which was identical to the 57 amino acids sequenced from the Mat fimbrillin. The region surrounding the mat homolog at the 6- to 8-min region in the K-12 chromosome encodes six hypothetical proteins, which are located on a 6,841-bp DNA fragment (Fig. 3). Restriction mapping with the enzymes NcoI, NruI, PstI, PvuI, SacII, SmaI, and SnaBI of the 7-kb fragment in pMAT2 gave a pattern closely similar to the one predicted from the K-12 chromosomal sequence (details not shown). We named three of these genes matA, matB, and matC, because they appeared to affect the synthesis of Mat fimbriae (see below); matB encodes the Mat fimbrillin homolog (Fig. 3). The DNA sequence containing the matA and matB genes of IHE 3034 was determined and compared to the corresponding region in the DNA sequence of MG1655. DNA sequence identity was 93.0% in the 156-bp region upstream of matA, 97.0% within matA, 93.2% in the 74-bp intergenic region separating matA and matB, 97.8% within matB, and 98.2% in the 57-bp intergenic region between matB and matC. The mat nucleotide sequences are available from the GenBank database under accession no. AF325731.
|
6, which is within the
signal sequence. The calculated molecular mass of mature MatB is 17,853 Da. The predicted MatB sequence of 195 amino acids exhibits 19 to 25%
identity with the FimA, SfaA, PapA, F17A, PpdD, CooA, and CsgA
fimbrillin sequences, with no areas of significant local identity. The
MatB sequence lacks typical motifs identified in E. coli
fimbrillins. The C terminus of MatB lacks the
-zipper motif
recognized by fimbrial chaperones (21), and its signal sequence and N terminus are not related to those in the type IV fimbrillins (53). MatB also lacks cysteine residues and
hence disulfide bonds. The predicted MatA sequence is of 196 amino
acids, lacks a detectable signal sequence, and contains at residues 145 to 195 a predicted helix-turn-helix DNA-binding motif similar to
the consensus pattern in the LuxR family of regulatory proteins (17).
|
Mutagenesis, complementation, and expression of
matB.
We next inactivated the matB gene
of E. coli IHE 3034 by allelic exchange with a
matB::cat fusion. A transconjugant with the correct antibiotic markers as well as genotype was isolated and named
IHE 3034-90. The correct genotype of IHE 3034-90 was confirmed by
Southern hybridization of BamHI-SacII-digested
DNA by using matB and the cat cassette as probes
(data not shown). The strain IHE 3034-90 did not express Mat fimbriae,
as analyzed by agglutination in anti-Mat fimbriae antisera, as well as
by IEM (data not shown) and whole-cell ELISA with anti-Mat fimbria
antibodies (Fig. 5A).
|
Presence of matB and expression of the Mat fimbria in isolates of E. coli IHE 3034 belongs to the serogroup O18acK1H7, which forms the major clonal group of MENEC. These isolates form a homogenous and distinct group of E. coli, as analyzed by several phenotypic assays and isoenzyme polymorphism (30, 31, 51). We analyzed 27 isolates representing various pathogroups of E. coli (Table 1) for the presence of matB as well as expression at 20 and 37°C of the Mat fimbria. The analyzed strains belonged to the O18K1H7 MENEC clonal group or to the clonal groups of UPEC (O1K1H7, O4K12H7, O6K2H1, O18K5H7, and O6K13H1), or they represented the diarrhea-causing pathogroups EAEC, EHEC, EPEC, and ETEC. Additionally, K-12 strains and the widely used UPEC strain 536 were analyzed. PCR and Southern hybridization showed the presence of a matB homolog in all strains except the two ETEC isolates (Table 1). The apparent size of the amplified matB fragment in the isolates was invariant and equalled the one seen in IHE 3034 (data not shown). However, expression of the Mat fimbria was detected only in the MENEC isolates grown at 20°C (Table 1).
Hemagglutination by E. coli IHE 3034-79. Many fimbrial types of E. coli recognize specific carbohydrate sequences. In order to test whether this might be the case for the Mat fimbria as well, we assessed hemagglutination of human erythrocytes by the strain IHE 3034-79 cultivated at 20°C. No agglutination was detected; neither did enzymatic treatments known to reveal cryptic carbohydrates on the erythrocyte surface induce detectable hemagglutination.
| |
DISCUSSION |
|---|
|
|
|---|
Mat fimbria represents a novel type of E. coli fimbria that is morphologically similar to the type 1 or P fimbriae, but serologically and in a subunit sequence unrelated to the previously characterized fimbrial proteins of E. coli or other bacteria. Although the matB gene encoding the major subunit was found to be common in E. coli isolates, it was expressed on the bacterial surface only in the genetically conserved clonal group of O18acK1H7 MENEC cultivated at low temperature. The matB gene is the fourth fimbrillin gene detected in laboratory K-12 strains, which previously have been shown to harbor fim genes encoding the type 1 fimbria, the csg genes encoding curli, as well as ppdD encoding the type IV fimbrillin (5, 9,25, 40, 48). Of these, only the type 1 fimbriae are expressed by E. coli K-12 under routine laboratory conditions at 37°C. Curli expression takes place at low temperature and low osmolarity (40). It was recently found that a fraction of E. coli isolates from cases of human adult urosepsis also express curli at 37°C (4). The type IV fimbriae require an exogeneous secretion apparatus for surface expression in E. coli K-12 (49), but are expressed in EPEC that harbor the EPEC adherence factor plasmid (35, 36). The matB fimbrillin gene appears to be common in E. coli and is expressed at low temperature by isolates of a genetically distinct pathogroup.
matB encodes the major subunit of the Mat fimbria. The
complete nucleotide sequence of matB was determined and the
deduced protein sequence matched the sequence of 57 amino acids
obtained from the Mat fimbria. The knockout
matB::cat mutation abolished Mat
fimbria production, which was complemented in trans by
matB-containing DNA together with at least either
matA or matC. The predicted sequence of MatB was
not related to the fimbrillin sequences deposited in data banks and
lacks the N-terminal motifs of type IV fimbrillins (53)
and CsgA-related fimbrillins (12, 40). MatB also lacks cysteine residues and the C-terminal
-zipper motif of
chaperone-assisted fimbrillins (21). These characteristics
are also lacking in the CooA fimbrillin of the CS1 filaments and in the
other fimbrillins detected on human ETEC strains (46). The
fimbrillins on human ETEC share 40 to 50% sequence identity with each
other, and their plasmid-borne gene clusters are closely related in
gene organization (46). However, we found only 23%
sequence identity between MatB and CooA, and the matA and
matC gene products showed a similar low sequence identity
with the four Coo proteins of the CS1 fimbria (46). The
ELISAs, Western blotting, and IEM with anti-Mat fimbria antibodies
showed that the Mat fimbria was immunologically distinct from the type
1 and S fimbriae expressed by MENEC. We thus conclude that the Mat
fimbria represents a novel fimbrial type of E. coli. We
could not detect any carbohydrate binding by the Mat fimbria and are
currently analyzing the binding of Mat fimbria to epithelial cells and
tissue proteins.
A matB homolog was detected in 25 of the 27 E. coli strains analyzed in this study. The analyzed isolates represented major pathogroups of E. coli as well as K-12 strains; the two matB-negative strains were ETEC isolates. The nucleotide sequence of matB of IHE 3034 was 97.8% identical to the matB from MG1665, and the matB homologs amplified from the genomic DNA of the E. coli isolates were of invariable size, also in isolates found not to express MatB. These findings indicate conservation of the matB gene in E. coli. We detected Mat fimbria expression only in the O18acK1H7 clonal group of MENEC, and it is noteworthy that the O1K1H7 isolates, which on the basis of isoenzyme polymorphism form a clonal group of E. coli strains genetically closest to the O18acK1H7 MENEC group (43, 51), did not express their matB gene under the conditions we tested.
We subcloned matB from IHE 3034-79 on a 7-kb fragment that supported Mat fimbria expression when transformed into E. coli K-12. This DNA fragment has a homolog in the MG1665 chromosome at the 6- to 8-min region and contains six putative genes (5), of which we found matA, matB, and matC affected Mat fimbria formation. The two chromosomal regions are highly similar; nucleotide sequencing showed that the matAB region was 96.6% identical for the sequenced 1,471-bp fragment, and a high level of identity of the whole 7-kb region was also evident in the restriction mapping. At present, the number of genes that are involved in Mat fimbria sythesis and regulation remains open. We also do not know whether genes located at a distance from the matB region are involved in fimbria synthesis. The fimbrial gene clusters of E. coli usually contain four or more genes needed for the structure, assembly, or regulation of the fimbrial filament (reviewed in references 20 and 27). Our complementation assays indicated that matB alone is not sufficient to confer Mat fimbria expression on E. coli XL1 or the strain IHE 3034-90 with the polar matB::cat mutation. Complementation was slightly more efficient in the matAB transformant and further increased in the matBC transformant, but was not significantly enhanced when fragments encompassing more than the matBC genes were introduced into IHE 3034 matB::cat or XL1 Blue MRF'. The RT-PCR analysis indicated that matB and matC are part of the same transcript, whereas we did not detect a matABC transcript, which suggests that matA is transcribed independently from matBC. It is noteworthy that the E. coli strain MG1665 contained a matA transcript, but we failed to amplify a matBC RNA from this strain. IEM did not reveal any major structural differences between Mat fimbrial filaments on E. coli K-12 expressing the pMAT plasmids. Western blotting of the Mat fimbriae showed the presence of a minor protein apparently smaller than MatB; its size, however, did not match those of any of the gene products from the mat region, and it may be a degradation product from MatB. On the other hand, in trans expression of mat genes in IHE 3034-90(pMAT3) showed a minor protein with an apparent size of ca. 20 kDa, which is close to the calculated size of mature MatC (22.4 kDa). The function of MatC in fimbria formation remains open. Lack of the chaperone target motif in the C terminus of MatB suggests that Mat fimbriae are not assembled by the classical chaperone-usher pathway of the P and the type 1 fimbriae (20), and the assembly mechanism of the Mat fimbria remains to be elucidated. The predicted sequence of MatA does not contain a signal sequence, whereas a putative signal sequence is present in the matB and matC gene products. The predicted MatA sequence contained a C-terminal helix-turn-helix DNA-binding motif of the LuxR family of regulatory proteins (17). This indicates that MatA may be a cytoplasmic protein functioning in regulation.
We found that transcription of matBC in IHE 3034 cells was reduced but not abolished at 37°C and that expression of mat genes from the plasmid pMAT3 with the inducible trc promoter also was temperature sensitive. These findings indicate that the temperature regulation of the mat genes involves transcriptional as well as posttranscriptional events. Expression of curli in E. coli K-12 is favored at low temperatures. The transcription of csgA is positively regulated by the RpoS sigma factor and repressed by the histone-like protein H-NS, but the temperature and osmolarity regulation of curli expression involves other factors (40). The mechanisms of the temperature regulation of Mat expression remain to be determined. Temperature is known to regulate translation by affecting mRNA conformation (2, 18) or the translational machinery itself (reviewed in reference 22). The matA sequence contains four copies of putative RNase E target sequences (37), which might become accessible upon temperature-induced conformational change. Temperature may also affect the stability of the MatB protein. The mechanisms behind the repression of mat expression in most E. coli isolates also remain open. We found by DNA sequencing and restriction mapping that the 7-kb mat regions in IHE 3034 and MG1655 are highly similar, which indicates that the lack of Mat fimbria expression in E. coli MG1655 does not result from truncation or lack of genes at this chromosomal region. E. coli IHE 3034 and another O18acK1H7 MENEC isolate were recently found to be rpoS mutants (57); whether this holds true for the entire O18acK1H7 MENEC clone and how RpoS influences mat expression are to be elucidated. RpoS is a positive regulator of curli expression, and we indeed have not detected curli expression in IHE 3034 cells cultivated at 20°C (B. Westerlund-Wikström and R. Pouttu, unpublished data). Our ongoing work has shown that silencing of rpoS does not alone lead to expression of the Mat fimbria. The regulation of the Mat fimbria expression appears complex and is particularly interesting because it seems to be a clonal property in E. coli.
| |
ACKNOWLEDGMENTS |
|---|
We thank Kaarina Lähteenmäki for help in initial electron microscopy and Raili Lameranta, Annu Alho, Lena Blomqvist, Ulla-Maija Nakari, Riikka Pirilä, and Suvi Simpanen for technical assistance.
This work was supported by the Sigrid Jusélius Foundation, the Academy of Finland (project no. 42103 and 42107), and the University of Helsinki.
| |
FOOTNOTES |
|---|
* Corresponding author. Mailing address: Division of General Microbiology, Department of Biosciences, P.O. Box 56 (Viikinkaari 9), FIN-0014 University of Helsinki, Finland. Phone: 358-9-19159260. Fax: 358-9-19159262. E-mail: timo.korhonen{at}helsinki.fi.
| |
REFERENCES |
|---|
|
|
|---|
| 1. |
Achtman, M.,
A. Mercer,
B. Kusecek,
A. Pohl,
M. Heuzenroeder,
W. Aaronson,
A. Sutton, and R. P. Silver.
1983.
Six widespread bacterial clones among Escherichia coli K1 isolates.
Infect. Immun.
39:315-335 |
| 2. |
Altuvia, S.,
D. Kornitzer,
D. Teff, and A. B. Oppenheim.
1989.
Alternative mRNA structure of the cIII gene of bacteriophage determine the rate of its translation initiation.
J. Mol. Biol.
210:265-280[CrossRef][Medline].
|
| 3. |
Båga, M.,
S. Normark,
J. Hardy,
P. O'Hanley,
D. Lark,
O. Olsson,
G. Schoolnik, and S. Falkow.
1984.
Nucleotide sequence of the papA gene encoding the Pap pilus subunit of human uropathogenic Escherichia coli.
J. Bacteriol.
157:330-333 |
| 4. | Bian, Z., A. Brauner, Y. Li, and S. Normark. 2000. Expression of and cytokine activation by Escherichia coli fibers in human sepsis. J. Infect. Dis. 181:602-612[CrossRef][Medline]. |
| 5. | Blattner, F. R., G. Plunkett III, C. A. Bloch, N. T. Perna, V. Burland, M. Riley, J. Collado-Vides, J. D. Glasner, C. K. Rode, G. F. Mayhew, J. Gregor, N. Wayne Davis, H. A. Kirkpatrick, M. A. Goeden, D. J. Rose, B. Mau, and Y. Shao. 1997. The complete genome sequence of Escherichia coli K-12. Science 227:1453-1462. |
| 6. | Bloch, C. A., B. A. D. Stocker, and P. E. Orndorf. 1992. A key role for type 1 pili in enterobacterial communicability. Mol. Microbiol. 6:697-701[CrossRef][Medline]. |
| 7. | Blomfield, I. C., M. S. McClain, and B. I. Eisenstein. 1991. Type 1 fimbriae mutants of Escherichia coli K12: characterization of recognized afimbriate strains and construction of new fim deletion mutants. Mol. Microbiol. 5:1439-1445[Medline]. |
| 8. | Boylan, M., D. C. Coleman, and C. J. Smyth. 1987. Molecular cloning and characterization of the genetic determinant encoding CS3 fimbriae of enterotoxigenic Escherichia coli. Microb. Pathog. 2:195-209[CrossRef][Medline]. |
| 9. |
Burland, V.,
G. Plunkett III,
H. J. Sofia,
D. L. Daniels, and F. R. Blattner.
1995.
Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes.
Nucleic Acids Res.
23:2105-2119 |
| 10. | Caugant, D. A., B. R. Levin, G. Lidin-Janson, T. S. Whittam, C. Svanborg-Edén, and R. K. Selander. 1983. Genetic diversity and relationships among strains of Escherichia coli in the intestine and those causing urinary tract infections. Prog. Allergy 33:203-227[Medline]. |
| 11. | Coligan, J. E., A. M. Kruisbeek, D. H. Margulies, E. M. Shevach, and W. Strober (ed.). 1994. Current protocols in immunology. John Wiley & Sons, New York, N.Y. |
| 12. |
Collinson, S. K.,
L. Emödy,
T. J. Trust, and W. W. Kay.
1992.
Thin aggregative fimbriae from diarrheagenic Escherichia coli.
J. Bacteriol.
174:4490-4495 |
| 13. | Frankel, G., A. D. Phillips, I. Rosenshine, G. Dougan, J. B. Kaper, and S. Knutton. 1998. Enteropathogenic and enterohaemorrhagic Escherichia coli: more subversive elements. Mol. Microbiol. 30:911-921[CrossRef][Medline]. |
| 14. | Froehlich, B. J., A. Karakashian, L. R. Melsen, J. C. Wakefield, and J. R. Scott. 1994. CooC and CooD are required for assembly of Cs1 pili. Mol. Microbiol. 12:387-401[CrossRef][Medline]. |
| 15. |
Hacker, J.,
H. Kestler,
H. Hoschützky,
K. Jann,
F. Lottspeich, and T. K. Korhonen.
1993.
Cloning and characterization of the S fimbrial adhesin II complex of an Escherichia coli O18:K1 meningitis isolate.
Infect. Immun.
61:544-550 |
| 16. |
Hacker, J.,
G. Schmidt,
C. Hughes,
S. Knapp,
M. Marget, and W. Goebel.
1985.
Cloning and characterization of genes involved in production of mannose-resistant, neuraminidase-susceptible (X) fimbriae from a uropathogenic O6:K15:H31 Escherichia coli strain.
Infect. Immun.
47:434-440 |
| 17. | Henikoff, S., J. C. Wallace, and J. P. Brown. 1990. Finding protein similarities with nucleotide sequence databases. Methods Enzymol. 183:111-132[Medline]. |
| 18. |
Hoe, N. P., and J. D. Goguen.
1993.
Temperature sensing in Yersinia pestis: translation of the LcrF activator protein is thermally regulated.
J. Bacteriol.
175:7901-7909 |
| 19. | Hohn, B., and J. Collins. 1980. A small cosmid for efficient cloning of large DNA fragments. Gene 11:291-298[CrossRef][Medline]. |
| 20. | Hultgren, S. J., C. H. Jones, and S. Normark. 1996. Bacterial adhesins and their assembly, p. 2730-2756. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed., vol. 2. ASM Press, Washington, D.C. |
| 21. | Hung, D. L., S. D. Knight, R. M. Woods, J. S. Pinkner, and S. J. Hultgren. 1996. Molecular basis of two subfamilies of immunoglobulin like chaperones. EMBO J. 15:3792-3805[Medline]. |
| 22. |
Hurme, R., and M. Rhen.
1998.
Temperature sensing in bacterial gene regulation what it all boils down to.
Mol. Microbiol.
30:1-6[CrossRef][Medline].
|
| 23. |
Keskimäki, M.,
M. Saari,
T. Heiskanen, and A. Siitonen.
1998.
Shiga toxin-producing Escherichia coli in Finland from 1990 through 1997: prevalence and characteristics of isolates.
J. Clin. Microbiol.
36:3641-3646 |
| 24. |
Keskimäki, M.,
L. Mattila,
H. Peltola, and A. Siitonen.
2000.
Prevalence of diarrheagenic Escherichia coli in Finns with or without diarrhea during a round-the-world trip.
J. Clin. Microbiol.
38:4425-4429 |
| 25. | Klemm, P. 1984. The fimA gene encoding the type-1 fimbrial subunit of Escherichia coli. Nucleotide sequence and primary structure of the protein. Eur. J. Biochem. 143:395-399[Medline]. |
| 26. | Klemm, P., B. J. Jorgensen, I. van Die, H. de Ree, and H. Bergmans. 1985. The fim genes responsible for synthesis of type 1 fimbriae in Escherichia coli, cloning and genetic organization. Mol. Gen. Genet. 199:410-414[CrossRef][Medline]. |
| 27. | Klemm, P., and M. A. Schembri. 2000. Bacterial adhesins: function and structure. Int. J. Med. Microbiol. 290:27-35[Medline]. |
| 28. | Korhonen, T. K., and J. Finne. 1985. Agglutination assays for detecting bacterial binding specificities, p. 301-303. In T. K. Korhonen, E.A. Dawes, and P. H. Mäkelä (ed.), Enterobacterial surface antigens: methods for molecular characterization. Elsevier Science Publishers, Amsterdam, The Netherlands. |
| 29. |
Korhonen, T. K.,
E. L. Nurmiaho,
H. Ranta, and C. Svanborg-Edén.
1980.
New method for isolation of immunologically pure pili from Escherichia coli.
Infect. Immun.
27:569-575 |
| 30. |
Korhonen, T. K.,
V. Väisänen-Rhen,
M. Rhen,
A. Pere,
J. Parkkinen, and J. Finne.
1984.
Escherichia coli fimbriae recognizing sialyl galactosides.
J. Bacteriol.
159:762-766 |
| 31. |
Korhonen, T. K.,
M. V. Valtonen,
J. Parkkinen,
V. Väisänen-Rhen,
J. Finne,
F. Ørskov,
I. Ørskov,
S. B. Svenson, and P. H. Mäkelä.
1985.
Serotypes, hemolysin production and receptor recognition of Escherichia coli strains associated with neonatal sepsis and meningitis.
Infect. Immun.
48:486-491 |
| 32. | Lintermans, P., P. Pohl, F. Deboeck, A. Bertels, C. Schlicker, J. Vandekerckhove, J. Van Damme, M. Van Montagu, and H. De Greve. 1998. Isolation and nucleotide sequence of the F17-A gene encoding the structural protein of the F17 fimbriae in bovine enterotoxigenic Escherichia coli. Infect. Immun. 56:1475-1484. |
| 33. |
McMichael, J. C., and J. T. Ou.
1979.
Structure of common pili from Escherichia coli.
J. Bacteriol.
138:969-975 |
| 34. |
Miller, V. L., and J. J. Mekalanos.
1988.
A novel suicide vector and its use in construction of insertion mutations: osmoregulation of outer membrane proteins and virulence determinants in Vibrio cholerae requires toxR.
J. Bacteriol.
170:2575-2583 |
| 35. |
Nataro, J. P., and J. B. Kaper.
1998.
Diarrheagenic Escherichia coli.
Clin. Microbiol. Rev.
11:142-201 |
| 36. |
Nataro, J. P.,
L. C. A. Scaletsky,
J. B. Kaper,
M. M. Levine, and L. R. Trabulsi.
1985.
Plasmid-mediated factors conferring diffuse and localized adherence of enteropathogenic Escherichia coli.
Infect. Immun.
48:378-383 |
| 37. | Nilsson, P., and B. E. Uhlin. 1991. Differential decay of a polycistronic Escherichia coli is initiated by RNaseE-dependent endonucleolytic processing. Mol. Microbiol. 5:1791-1799[Medline]. |
| 38. |
Nowicki, B.,
M. Rhen,
V. Väisänen-Rhen,
A. Pere, and T. K. Korhonen.
1984.
Immunofluorescence study of fimbrial phase variation in Escherichia coli KS71.
J. Bacteriol.
160:691-695 |
| 39. | Olsén, A., A. Jonsson, and S. Normark. 1989. Fibronectin binding mediated by a novel class of surface organelles on Escherichia coli. Nature 338:652-655[CrossRef][Medline]. |
| 40. | Olsén, A., A. Arnqvist, M. Hammar, S. Sukupolvi, and S. Normark. 1993. The RpoS sigma factor relieves H-NS-mediated transcriptional repression of csgA, the subunit gene of fibronectin-binding curli in Escherichia coli. Mol. Microbiol. 7:523-536[CrossRef][Medline]. |
| 41. | Paunio, M., R. Peabody, M. Keskimäki, M. Kokki, P. Ruutu, S. Oinonen, V. Vuotari, A. Siitonen, E. Tast, and P. Leinikki. 1999. Swimming associated outbreak of enterohemorrhagic Escherichia coli (EHEC) O157:H7. Epidemiol. Infect. 122:1-5[CrossRef][Medline]. |
| 42. | Pere, A., B. Nowicki, H. Saxén, A. Siitonen, and T. K. Korhonen. 1987. Expression of P, type-1, and type-1C fimbriae of Escherichia coli in the urine of patients with acute urinary tract infection. J. Infect. Dis. 156:567-574[Medline]. |
| 43. |
Pere, A.,
R. K. Selander, and T. K. Korhonen.
1988.
Characterization of P fimbriae on O1, O7, O75, rough, and nontypable strains of Escherichia coli.
Infect. Immun.
56:1288-1294 |
| 44. |
Perez-Casal, J.,
J. S. Swartley, and J. R. Scott.
1990.
Gene encoding the major subunit of CS1 pili of human enterotoxigenic Escherichia coli.
Infect. Immun.
58:3594-3600 |
| 45. | Pouttu, R., T. Puustinen, R. Virkola, J. Hacker, P. Klemm, and T. K. Korhonen. 1999. Amino-acid residue Ala-62 in the FimH fimbrial adhesin is critical for the adhesiveness of meningitis-associated Escherichia coli to collagens. Mol. Microbiol. 31:1747-1757[CrossRef][Medline]. |
| 46. | Sakellaris, H., and J. R. Scott. 1998. New tools in an old trade: CS1 pilus morphogenesis. Mol. Microbiol. 30:681-687[CrossRef][Medline]. |
| 47. | Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y. |
| 48. |
Sauvonnet, N.,
P. Gounon, and A. P. Pugsley.
2000.
PpdD type IV pilin of Escherichia coli K-12 can be assembled into pili in Pseudomonas aeruginosa.
J. Bacteriol.
182:848-854 |
| 49. | Sauvonnet, N., G. Vignon, A. P. Pugsley, and P. Gounon. 2000. Pilus formation and protein secretion by the same machinery in Escherichia coli. EMBO J. 19:2221-2228[CrossRef][Medline]. |
| 50. |
Selander, R. K., and B. R. Lewin.
1980.
Genetic diversity and structure in Escherichia coli populations.
Science
210:545-547 |
| 51. |
Selander, R. K.,
T. K. Korhonen,
V. Väisänen-Rhen,
P. H. Williams,
P. E. Pattison, and D. A. Caugant.
1986.
Genetic relationships and clonal structure of strains of Escherichia coli causing neonatal septicemia and meningitis.
Infect. Immun.
52:213-222 |
| 52. |
Sokurenko, E. V.,
V. Chesnokova,
D. E. Dykhuizen,
I. Ofek,
X.-R. Wu,
K. A. Krogfelt,
C. Struve,
M. A. Schembri, and D. L. Hasty.
1998.
Pathogenic adaptation of Escherichia coli by natural variation of the FimH adhesin.
Proc. Natl. Acad. Sci. USA
95:8922-8926 |
| 53. | Strom, M. S., and S. Lory. 1993. Structure function and biogenesis of the type IV pili. Annu. Rev. Microbiol. 47:565-596[CrossRef][Medline]. |
| 54. | Tietze, E., J. Brevet, H. Tschäpe, and W. Voigt. 1988. Cloning and preliminary characterization of the streptothricin resistance determinants of the transposons Tn 1825 and Tn 1826. J. Basic Microbiol. 28:129-136[Medline]. |
| 55. |
Väisänen-Rhen, V.,
J. Elo,
E. Väisänen,
A. Siitonen,
I. Ørskov,
F. Ørskov,
S. B. Svenson,
P. H. Mäkelä, and T. K. Korhonen.
1984.
P-fimbriated clones among uropathogenic Escherichia coli strains.
Infect. Immun.
43:149-155 |
| 56. |
Virkola, R.,
J. Parkkinen,
J. Hacker, and T. K. Korhonen.
1993.
Sialyloligosaccharide chains of laminin as an extracellular matrix target for S fimbriae of Escherichia coli.
Infect. Immun.
61:4480-4484 |
| 57. | Wang, Y., and K. S. Kim. 2000. Effect of rpoS mutations on stress-resistance and invasion of brain microvascular endothelial cells in Escherichia coli K1. FEMS Lett. 182:241-247. |
| 58. |
Westerlund-Wikström, B.,
J. Tanskanen,
R. Virkola,
J. Hacker,
M. Lindberg,
M. Skurnik, and T. K. Korhonen.
1997.
Functional expression of adhesive peptides as fusions to Escherichia coli flagellin.
Prot. Eng.
10:1319-1326 |
| 59. | Whittam, T. S. 1996. Genetic variation and evolutionary processes in natural populations of Escherichia coli, p. 2708-2720. In F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, K. B. Low, B. Magasanik, W. S. Reznikoff, M. Riley, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed., vol. 2. ASM Press, Washington D.C. |
| 60. | Xia, Y., D. Gally, K. Forsman-Semb, and B. E. Uhlin. 2000. Regulatory cross-talk between adhesin operons in Escherichia coli: inhibition of type 1 fimbriae expression by the PapB-protein. EMBO J. 19:1450-1457[CrossRef][Medline]. |
| 61. | Ylönen, A., A. Rinne, J. Herttuainen, J. Bögwald, M. Järvinen, and N. Kalkkinen. 1999. Atlantic salmon (Salmo salar L.) skin contains a novel kininogen and another cysteine proteinase inhibitor. Eur. J. Biochem. 266:1-8[Medline]. |
This article has been cited by other articles: