Previous Article | Next Article ![]()
Journal of Bacteriology, December 2001, p. 7126-7134, Vol. 183, No. 24
Department of
Genetics1 and Department of
Surgery,3 Harvard Medical School, and
Department of Molecular Biology2 and
Shriner's Burns Institute,4
Massachusetts General Hospital, Boston, Massachusetts 02114
Received 4 June 2001/Accepted 18 September 2001
We cloned the rpoN (ntrA, glnF) gene
encoding the alternate sigma factor In gram-negative bacteria, the
alternate sigma factor Our laboratory has developed a bacterial pathogenicity model that
utilizes a clinical isolate of P. aeruginosa (strain
UCBPP-PA14 [referred to here as PA14]) that elicits severe
soft-rot-like symptoms and proliferates when infiltrated into
Arabidopsis leaves (52), kills the larvae of
the wax moth caterpillar Galleria mellonella
(30), causes lethal sepsis in a mouse
full-skin-thickness burn model (52), and kills the
nematode Caenorhabditis elegans (40, 56, 57).
Interestingly, there is significant overlap among the PA14 virulence
factors required for pathogenesis in plants, nematodes, insects, and
mice. For example, among 21 genes identified as being involved in
pathogenesis by screening transposon-induced PA14 mutants in plants and
nematodes, 18, 17, 19, and 21 of these genes were required for
pathogenicity in Arabidopsis, nematodes, wax moths, and
mice, respectively (30, 40, 53, 57).
In other studies, we showed that rpoN is a key virulence
factor for the plant pathogen P. syringae (23,
24). Specifically, molecular and genetic analysis showed that
the P. syringae rpoN gene is required for expression of the
P. syringae hrp gene cluster, a block of contiguous genes,
some of which encode components of a type III secretory system
(2, 18, 26, 45, 46, 59).
Given the facts that RpoN activates the expression of a wide variety of
environmentally regulated genes and is required for virulence in a
variety of pathogens, we hypothesized that RpoN would play a central
role in the evolution of P. aeruginosa's ability to be a
pathogen of evolutionarily disparate hosts. In this study we describe
the results of experiments that involved the construction of a P. aeruginosa PA14 rpoN mutant to study the role of
Bacterial strains, plasmids, and culture conditions.
The
bacterial strains and plasmids used and constructed in this study are
listed in Table 1. Escherichia
coli and P. aeruginosa strains were grown at 37°C in
L broth, King's A (KA), King's B (KB) (33), or M9
minimal salts media. Nitrogen source utilization tests for PA14
rpoN mutants were performed in M9 salts minimal medium by
replacing ammonium chloride with an alternative nitrogen source at 5 mM
when required. Bacterial motility was tested on "swarm plates"
(35). Pyocyanin assays (17) were carried out in KA broth containing 100 µM FeCl3 (17,
33). Pyoverdin was assayed on KB plates as described previously
(57). C. elegans killing assays were carried
out on NG agar ("slow killing" [56]) or PGS agar
("fast killing" [56]) as described elsewhere.
Antibiotic concentrations for E. coli strains were as
follows: streptomycin, 150 µg/ml; kanamycin, 25 µg/ml;
tetracycline, 12 µg/ml; gentamicin, 5 to 10 µg/ml; and
spectinomycin, 20 µg/ml. Antibiotic concentrations for P. aeruginosa were as follows: streptomycin, 200 µg/ml; kanamycin, 200 µg/ml; tetracycline, 75 µg/ml; gentamicin, 30 µg/ml;
nalidixic acid, 50 µg/ml; rifampin, 100 µg/ml, and carbenicillin,
300 µg/ml.
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.24.7126-7134.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Differential Roles of the Pseudomonas aeruginosa
PA14 rpoN Gene in Pathogenicity in Plants,
Nematodes, Insects, and Mice


![]()
ABSTRACT
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
54 from the
opportunistic multihost pathogen Pseudomonas aeruginosa strain PA14. A marker exchange protocol was used to construct the PA14
rpoN insertional mutation
rpoN::Genr. PA14
rpoN::Genr synthesized
reduced levels of pyocyanin and displayed a variety of phenotypes
typical of rpoN mutants, including a lack of motility and the failure to grow on nitrate, glutamate, or histidine as the sole
nitrogen source. Compared to wild-type PA14,
rpoN::Genr was ca. 100-fold less
virulent in a mouse thermal injury model and was significantly impaired
in its ability to kill the nematode Caenorhabditis
elegans. In an Arabidopsis thaliana leaf
infectivity assay, although
rpoN::Genr exhibited significantly
reduced attachment to trichomes, stomata, and the epidermal cell
surface, did not attach perpendicularly to or perforate mesophyll cell
walls, and proliferated less rapidly in Arabidopsis
leaves, it nevertheless elicited similar disease symptoms to wild-type
P. aeruginosa PA14 at later stages of infection. rpoN::Genr was not impaired in
virulence in a Galleria mellonella (greater wax moth)
pathogenicity model. These data indicate that rpoN does not regulate the expression of any genes that encode virulence factors
universally required for P. aeruginosa pathogenicity in diverse hosts.
![]()
INTRODUCTION
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
54, working in concert
with a transcriptional activator that belongs to the NtrC superfamily,
activates a variety of genes that are regulated in response to external
stimuli (1). For example, in various bacteria,
54 is required for expression of the enzymatic
pathways responsible for nitrogen utilization, dicarboxylate
transport, xylene degradation, and hydrogen utilization (6, 32,
39, 41, 61).
54 is also involved in the
regulation of virulence-related factors in both plant and animal
pathogens, including pilin, flagellin, and alginate synthesis in
Pseudomonas aeruginosa (19, 58, 60); capsular
expression in Klebsiella pneumoniae (3); and regulation of hrp gene expression and coronatine
biosynthesis in Pseudomonas syringae (23, 24).
54 in P. aeruginosa pathogenesis in
a variety of plant and animal hosts. Surprisingly, we report that the
P. aeruginosa rpoN gene is not a universal virulence factor
required for multihost pathogenesis.
![]()
MATERIALS AND METHODS
Top
Abstract
Introduction
Materials and Methods
Results and Discussion
References
TABLE 1.
Bacterial strains and plasmids
Bacterial genetics. pJSR1 derivatives were introduced into Pseudomonas strains via triparental matings with MM294/pRK2013 as the donor of transfer functions as described previously (14). Plasmid pSMC21 (7) containing the Aequorea victoria green fluorescent protein (GFP) was introduced into PA14 rpoN::Genr by electroporation.
Pyocyanin assays. Pyocyanin was measured at 520 nm in acidic solution by using a modified version of a previously described method (17). Cultures were grown from a 100-fold dilution of a log-phase culture in KA broth modified with 100 µM FeCl3. After 20 h, 1 ml of the culture was extracted with 2 ml of chloroform and centrifuged for 5 min. The blue chloroform solution was transferred into a new tube containing 1 ml of 0.2 N HCl to extract pyocyanin into the acidic solution. The concentration was determined by measuring the optical density at 520 nm (OD520).
Plant material and growth of plants. Arabidopsis ecotypes Llagostera (Ll-0) and Landsberg erecta (La-er) were obtained from the Arabidopsis Biological Resource Center, Columbus, Ohio. Arabidopsis plants were grown in Metro-Mix 2000 in either a climate-controlled greenhouse at 19°C under a 12-h light-dark cycle with supplemental fluorescent illumination or in a Percival AR-60L growth chamber at 20°C and 50% relative humidity.
Arabidopsis pathogenicity assays. Six- to eight-week-old intact or detached Arabidopsis rosette leaves were used for pathogenicity assays. The pathogenicity of PA14 strains was tested by placing detached Ll-0 leaves on a 1.5% water agar surface with their petioles embedded into the agar and inoculating the leaves by growing lawns of PA14 or PA14 rpoN::Genr overnight on LB agar medium containing rifampin (PA14) and gentamicin (rpoN::Genr), cutting 3-mm-diameter agar cylinders from these plates, and placing the cylinders bacterial side down on one or both sides of the central vein in the top half of a leaf. The growth of PA14 or PA14 rpoN::Genr in Arabidopsis leaves was determined by infiltrating the leaves of intact La-er plants with 5 × 104 CFU/cm2 of leaf area as described previously (52). The growth of PA14 or PA14 rpoN::Genr in detached Arabidopsis leaves was determined by infiltrating Ll-0 leaves with a bacterial suspension in 10 mM MgSO4 at a density of 5 × 104 CFU/ml for 1 h under a slight vacuum at room temperature in the wells of a six-well microtiter plate. At days 0, 1, 2, 3, and 4, the titer of the bacteria in each of two punches in each of three leaves was determined as described previously (15).
Infection of G. mellonella larvae. The 50% lethal dose (LD50) of PA14 strains in G. mellonella larvae was determined as described previously (30). In brief, overnight cultures grown in KB medium were diluted 1:100, allowed to grow until they reached an OD600 of 0.3 to 0.4, and resuspended in 10 mM MgSO4. After dilution to an OD600 of 0.1 with 10 mM MgSO4, serial 10-fold dilutions were made in 10 mM MgSO4 containing 1 mg of rifampin/ml and 10 mg of carbenicillin/ml. A 10-µl Hamilton syringe was used to inject 5-µl aliquots into the hindmost left proleg of fifth-instar G. mellonella larvae purchased from Van der Horst Wholesale, St. Mary's, Ohio. Groups of 10 larvae infected with the same dose of bacteria were placed in petri dishes and incubated at 25°C for 60 h. Larvae were scored as dead when they no longer moved upon shaking of the petri dish or poking with a pipette tip.
Mouse full-skin-thickness burn model. Inbred AKR mice that had been subjected to a thermal burn injury were infected with PA14 strains as described previously (54). In brief, 6-week-old male mice were anesthetized by the injection of phenobarbital. The animals were then shaved, and a ventral skin fold was elevated. Two brass blocks preheated to 92 to 95°C were applied to the skin fold for 5 s to deliver a full-skin-thickness burn covering ca. 5% of the body surface area. The burn eschar was injected with 100 µl of bacterial suspension at a titer of 5 × 104 or 5 × 106 bacteria per ml. Bacteria for the inoculation were grown overnight in LB, diluted 1:100, allowed to grow until they reached an OD600 of 1.6 to 1.7, pelleted by centrifugation, and resuspended and diluted in 10 mM MgSO4. The mouse protocol was reviewed and approved by the Animal Care Committee of the Massachusetts General Hospital.
C. elegans killing assay. The killing kinetics of C. elegans strain Bristol N2 by PA14 strains were determined on PGS agar (fast-killing assay) or NG agar (slow-killing assay) as described previously (56).
Nucleic acid manipulations. Routine DNA manipulations such as DNA blots and plasmid DNA isolation were performed as described previously (4). Restriction enzymes, T4 DNA ligase, and calf intestine phosphatase were purchased from Boeringer Mannheim and New England BioLabs and used according to the manufacturers' specifications.
Cloning the P. aeruginosa PA14 rpoN gene and construction of a PA14 rpoN mutant. A cosmid clone, pRPON10, containing a presumptive P. aeruginosa PA14 rpoN gene was identified in a pJSR1 cosmid library (52) by colony hybridization with P. aeruginosa strain PAK rpoN gene on plasmid pKI11 as a hybridization probe. The presumptive PA14 rpoN gene was mapped to a 4.0-kb XhoI-EcoRI fragment and was subcloned into pBSK(+) to produce pPAR4. DNA sequence analysis showed 95% identity out of 141 nucleotides sequenced between the PA14 rpoN gene and the P. aeruginosa PAO1 rpoN gene (reference 31 and data not shown).
A mutant derivative of the PA14 rpoN gene was constructed by inserting a DNA cassette conferring gentamicin resistance (Genr) into the ClaI site of the PA14 rpoN gene in pPAR4 to create rpoN::Genr and then excising a 5.5-kb XhoI-SpeI fragment containing rpoN::Genr and ligating it into the EcoRI site of pBR322 to create pRPONgent. pRPONgent (containing rpoN::Genr) was conjugated into PA14 via a triparental mating by using pRK2013 (14), and rpoN::Genr was marker exchanged into the PA14 genome by first selecting for gentamicin resistance and then screening for carbenicillin sensitivity.Scanning electron and confocal microscopy. To monitor the attachment of PA14 GFP-labeled strains to the epidermal cell walls of Ll-0 leaves and to Ll-0 trichomes by confocal laser microscopy, 4-mm-diameter leaf disks were immersed in bacterial suspensions at a density of ca. 109 cells/ml under weak vacuum to remove possible air bubbles from the surface of the leaf disks and make the leaf surface more accessible to bacteria. Subsequently, leaf disks were incubated for 24 h in the bacterial suspensions with shaking under normal pressure and room temperature. The leaf disks were examined with a confocal laser spectrophotometer (Leica TCS NT) by excitation at 488 nm and by monitoring the emission intensity at 511 nm. To monitor the development of PA14 strains in Ll-0 parenchyma cells by scanning electron microscopy, 4-mm-diameter leaf disks were cut from the central portion of a leaf from either side of the central vein with a cork borer and then immersed in a PA14 or PA14 rpoN::Genr suspension at an OD600 of 0.02 in 10 mM MgSO4 in the wells of a 24-well microtiter dish, followed by incubation at room temperature. Leaf disks were fixed at 1, 2, 3, and 4 days postinfection (dpi) in 4% paraformaldehyde, passed through an ethanol series (30, 50, 70, 96, and 100%), and freeze fractured in liquid nitrogen. The plant material was dried in a critical-point drying apparatus (Samdri-PVT-3B; Tousimis), mounted on stubs, coated with a 20- to 25-µm layer of gold-palladium in a Hummer II Sputter Coater (Technics), and studied by using an AMRAY 1000 scanning electron microscope.
| |
RESULTS AND DISCUSSION |
|---|
|
|
|---|
PA14 rpoN::Genr exhibits a variety of characteristic RpoN. phenotypes. As described in Materials and Methods, an interspecies hybridization method was used to identify and clone the P. aeruginosa PA14 rpoN gene. The PA14 rpoN gene was partially sequenced and over this region showed 95% identity to both P. aeruginosa PAO1 and PAK rpoN sequences (data not shown). Also, as described in Materials and Methods, a PA14 rpoN mutant (rpoN::Genr) was constructed by inserting a DNA cassette conferring gentamicin resistance into the ClaI site of the PA14 rpoN gene and transferring the disrupted gene into the PA14 genome by homologous recombination. The Genr cassette is inserted within the N-terminal 33% of rpoN, before the highly conserved carboxy-terminal region (31, 41).
Unlike wild-type PA14, rpoN::Genr exhibited a variety of characteristic RpoN
phenotypes.
Similar to a previously described P. aeruginosa PAK rpoN mutant (strain PAK N1) (58), PA14
rpoN::Genr was nonmotile and
did not grow well on glutamate, histidine, or nitrate as the sole
nitrogen source (Table 2). Electron
microscopic examination showed that PA14
rpoN::Genr cells were
nonflagellated (data not shown). In contrast to a previous report that
P. aeruginosa PAK rpoN (strain N1) is a glutamine auxotroph (58), we found that both PAK rpoN
(strain N1) and PA14
rpoN::Genr grew slowly in
the absence of glutamine. Restricted nitrogen utilization, rather than
glutamine auxotrophy, is also observed with rpoN mutants of
P. syringae and P. putida (36).
|
phenotypes of PA14
rpoN::Genr were due to the
rpoN::Genr insertion, a
4.0-kb DNA fragment containing a wild-type copy of PA14
rpoN on plasmid pPAR4SR was introduced into the PA14
rpoN::Genr strain.
This plasmid restored motility and wild-type growth on all of the
nitrogen sources listed in Table 2. Although this complementation
experiment did not rule out the possibility that the
rpoN::Genr insertion has a
polar effect on downstream genes, it appears likely
that the RpoN
phenotypes of PA14
rpoN::Genr are primarily due
to the disruption of the rpoN gene. This conclusion is based
on the conservation of the genomic region surrounding rpoN
in P. aeruginosa strain PAO1 in comparison to the analogous genomic regions in several bacterial species (29, 31, 42, 44, 50,
55). Upstream of the PAO1 rpoN gene is an open
reading frame (ORF) with homology to the ATP-binding component of an
ABC transporter (21). Downstream of rpoN in
PAO1 are four ORFs (55). Homologous downstream ORFs are
found in several species (29, 31, 42, 44, 50, 55). The
second ORF is homologous to the enzyme IIA domains of several proteins
of the bacterial sugar phosphotransferase system (PTS)
(31). The fourth ORF is homologous to the gene for the HPr
protein, which is also a component of the PTS (50). ORF1
and -3 encode peptides that have no homology to proteins of known
function. These downstream ORFs appear to play a role in modifying RpoN
activity, although the effects are relatively minor. Disruption of the
second downstream ORF in P. aeruginosa strain PAK reduced
the ability of PAK to grow without glutamine, but overexpression of
ORF1 or ORF2 by the tac promoter had no measurable effect
(31). Mutation of either the first or second downstream
ORFs in K. pneumoniae increased expression of a number of
rpoN-regulated genes (42). In Caulobacter
crescentus and Rhizobium etli, mutations of the
downstream ORFs had only a minor effect on one
rpoN-regulated gene, fliK (29), or
had no measurable effect (44), respectively.
PA14 rpoN::Genr synthesizes reduced levels of pyocyanin. P. aeruginosa secretes a variety of compounds under nutrient-limiting conditions, including the yellow-green siderophore pyoverdin and the blue microbial toxin pyocyanin (10, 43). Pyoverdin may be a virulence factor in burn wound infections (5, 43), and pyocyanin has been implicated in pulmonary artery injury (9, 22). KA Fe3+ medium or swarm plates turned noticeably blue when PA14 was grown to stationary phase, whereas no blue color was observed after the growth of PA14 rpoN::Genr. Quantitative measurement showed that PA14 rpoN::Genr produced 56% ± 13% less pyocyanin than did the wild type and that pyocyanin production was restored to wild-type levels in PA14 rpoN::Genr(pPAR4SR). Pyoverdin production appeared to be unaffected in PA14 rpoN::Genr. PA14 colonies grown on KB plates express pyoverdin, which can be detected by fluorescence when the colonies are exposed to long-wavelength UV light. Visual inspection revealed no noticeable difference between wild-type and PA14 rpoN::Genr colonies.
PA14 rpoN::Genr exhibits
reduced pathogenicity in mice.
As shown in Table
3, PA14
rpoN::Genr was significantly
less pathogenic than wild-type PA14 in a mouse burn model. A high
percentage of lethality was observed with PA14 at both a relatively
high dose of 5 × 105 cells (100%
lethality) and a relatively low dose of 5 × 103 cells (~80% lethality). In contrast, only
five of eight and one of seven animals died when inoculated with 5 × 105 and 5 × 103
PA14 rpoN::Genr,
respectively. The use of two different doses allows a better estimation
of the mutation's effects on virulence. In the case of
rpoN, even the high dose was not as lethal as wild type at a
100-fold-lower dose, demonstrating a significant reduction in virulence. These burn model data are consistent with previous reports
demonstrating that P. aeruginosa rpoN mutants or P. aeruginosa mutants which contain lesions in RpoN-regulated genes
exhibit reduced colonization and virulence in a number of other model systems. rpoN mutants showed a reduced ability to colonize
in a chronic murine intestinal mucosal model (48) or in
human respiratory epithelial xenografts (11) and exhibited
reduced virulence in a murine corneal scratch model (51)
or in a murine model of acute pneumonia (12). One
limitation of these studies, as well as of our own, however, is the
fact that rpoN mutants are nonmotile, and it is not known to
what extent the nonmotile phenotype of the rpoN mutants
contributes to the loss of virulence. Nonmotile mutants of P. aeruginosa strains M2, PA01, and MT1200 exhibited significant
reduction in virulence in a mouse burn model (16). The
reduction was at the same level or greater than that seen with the PA14
rpoN mutant. Thus, the entire effect on virulence of the
rpoN mutant in P. aeruginosa PA14 in the mouse
burn model could be due to the loss of motility. RpoN is also an
important virulence factor for virulence of Vibrio
anguillarum in fish (47) and Vibrio
cholerae in an infant mouse colonization model (13, 34). In the case of V. cholerae, it appears that
unknown rpoN-regulated genes, in addition to the flagellum
genes, are required for colonization.
|
PA14 rpoN::Genr exhibits
reduced pathogenicity in Arabidopsis.
We have
developed several assays to assess the pathogenicity of P. aeruginosa in Arabidopsis leaves, comparing attachment to plant leaf surfaces and monitoring growth rate and symptom development. We previously showed (49) that when
Arabidopsis ecotype Ll-0 leaf disks are incubated in a dense
bacterial suspension (i.e., ~109 cells/ml) for
24 h, wild-type PA14 cells attached to the entire leaf epidermal
cell surface, congregated above most of the stomata, and formed large,
multilayered clusters on the trichomes (Fig. 1A and C). In contrast, as shown in Fig.
1B and D, PA14 rpoN::Genr
cells primarily attached to the grooves formed at cell junctions, and
very few of the mutant bacteria were located above the stomata or
associated with trichomes.
|
|
|
PA14 rpoN::Genr exhibits
reduced C. elegans killing.
When the nematode
C. elegans is fed a lawn of PA14 grown on solid medium, the
nematodes die in two characteristic ways depending on the medium on
which PA14 is grown (56). On a high-osmolarity but
low-phosphate medium (e.g., PGS), the nematodes die rapidly (fast
killing) over the course of 24 h. In contrast, nematodes that are
fed PA14 grown on a low-osmolarity but high-phosphate medium (NGM) are
killed at a slower rate (slow killing), dying after 2 to 3 days.
Previous studies have shown that the killing of C. elegans
by PA14 under these two different conditions is mediated by distinct
molecular mechanisms (40, 56, 57). As shown in Fig.
4, there was significantly less killing
of C. elegans by PA14
rpoN::Genr compared to
killing by wild-type PA14 under both the fast- and slow-killing
conditions. The killing of PA14
rpoN::Genr in the
fast-killing assay was restored to wild-type levels by pPAR4SR, which
carries wild-type rpoN, indicating that the loss of
pathogenicity phenotype of PA14
rpoN::Genr was due to the
disruption of the rpoN gene (data not shown). The decrease
in fast killing by PA14
rpoN::Genr is consistent
with the results described above showing that PA14 rpoN::Genr synthesizes
reduced levels of pyocyanin. Previous results from our laboratory
showed that pyocyanin is an important toxin mediating the fast-killing
process (40).
|
PA14 rpoN::Genr does not
exhibit reduced pathogenicity in G. mellonella
A
single PA14 cell is sufficient to kill a greater wax moth caterpillar
when PA14 is injected into the hemolymph (30). We found
that PA14 and PA14 rpoN::Genr were
indistinguishable in their ability to kill fifth-instar wax moth larvae
(data not shown). The LD50 in both cases was approximately one bacterial cell. This is interesting in light of the decreased virulence of PA14 rpoN::Genr in
the mouse burn model. Microbial defense in insects shows interesting parallels to innate immunity in mammals and plants (8, 25, 27). Members of the cecropin class of antibacterial peptides have been found in both mammals and insects, and cecropin A in Drosophila melanogaster is regulated by a cascade
similar to the one involving NF-
B activation in the mammalian
inflammatory response (38). The reduction in virulence of
PA14 rpoN::Genr in mice but not in
wax moths suggests that rpoN does not play a significant
role in the regulation of virulence factors that affect components of
the host innate immune system conserved between insects and mammals.
Conclusions. Previous work with PA14 in our laboratory has shown that PA14 utilizes a common set of virulence factors in evolutionarily disparate hosts (30, 40, 53, 57). Given this and the highly pleiotropic nature of rpoN mutants, we expected that disruption of rpoN would result in a significant impairment in plant, nematode, insect, and mouse pathogenicity. Surprisingly, a major reduction in pathogenicity of the P. aeruginosa PA14 rpoN mutant was observed only in C. elegans killing and in the elicitation of sepsis in the mouse burn model. Although decreased lesion size and a 10-fold reduction in in planta growth was observed in Arabidopsis at early stages of an infection (3 to 4 dpi), at later stages (7 dpi) the P. aeruginosa rpoN mutant elicited disease symptoms that were indistinguishable from those caused by the wild type. This contrasts with the absolute requirement for RpoN function in P. syringae for pathogenicity (23, 24). No effect of the rpoN mutation was observed in G. mellonella killing. Thus, although it has been previously reported that P. aeruginosa rpoN mutants exhibit impaired virulence in mice, the results reported here provide a more complete perspective concerning the role of RpoN in the diverse pathogenic interactions that P. aeruginosa has with several evolutionarily disparate hosts. The major conclusion is that, in contrast to our expectations, rpoN does not appear to regulate any genes that are likely to encode virulence factors universally required for pathogenicity irrespective of the host.
| |
ACKNOWLEDGMENTS |
|---|
This work was supported by NIH grant GM48707 to F.M.A. and by grants from Hoechst AG and Aventis SA to Massachusetts General Hospital.
| |
FOOTNOTES |
|---|
* Corresponding author. Mailing address: Department of Molecular Biology, Wellman 10, Massachusetts General Hospital, Boston, MA 02114. Phone: (617) 726-5969. Fax: (617) 726-5949. E-mail: ausubel{at}molbio.mgh.harvard.edu.
Present address: Department of Microbiology, University of
Washington, Seattle, WA 98195.
Present address: Microbia, Inc., Cambridge, MA 02139.
| |
REFERENCES |
|---|
|
|
|---|
| 1. | Albright, L. M., E. Huala, and F. M. Ausubel. 1989. Prokaryotic signal transduction mediated by sensor and regulator protein pairs. Annu. Rev. Genet. 23:311-336[CrossRef][Medline]. |
| 2. |
Alfano, J. R., and A. Collmer.
1997.
The type III (Hrp) secretion pathway of plant pathogenic bacteria: trafficking harpins, Avr proteins, and death.
J. Bacteriol.
179:5655-5662 |
| 3. |
Arakawa, Y.,
R. Wacharotayankun,
T. Nagatsuka,
H. Ito,
N. Kato, and M. Ohta.
1995.
Genomic organization of the Klebsiella pneumoniae cps region responsible for serotype K2 capsular polysaccharide synthesis in the virulent strain Chedid.
J. Bacteriol.
177:1788-1796 |
| 4. | Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. 2001. Current protocols in molecular biology. John Wiley & Sons, New York, N.Y. |
| 5. | Barton, H. A., Z. Johnson, C. D. Cox, A. I. Vasil, and M. L. Vasil. 1996. Ferric uptake regulator mutants of Pseudomonas aeruginosa with distinct alterations in the iron-dependent repression of exotoxin A and siderophores in aerobic and microaerobic environments. Mol. Microbiol. 21:1001-1017[CrossRef][Medline]. |
| 6. | Black, L. K., and R. J. Maier. 1995. IHF- and RpoN-dependent regulation of hydrogenase expression in Bradyrhizobium japonicum. Mol. Microbiol. 16:405-413[CrossRef][Medline]. |
| 7. | Bloemberg, G. V., G. A. O'Toole, B. J. Lugtenberg, and R. Kolter. 1997. Green fluorescent protein as a marker for Pseudomonas spp. Appl. Environ. Microbiol. 63:4543-4551[Abstract]. |
| 8. | Boman, H. G. 1995. Peptide antibiotics and their role in innate immunity. Annu. Rev. Immunol. 13:61-92[CrossRef][Medline]. |
| 9. | Britigan, B. E., G. T. Rasmussen, and C. D. Cox. 1997. Augmentation of oxidant injury to human pulmonary epithelial cells by the Pseudomonas aeruginosa siderophore pyochelin. Infect. Immun. 65:1071-1076[Abstract]. |
| 10. |
Byng, G. S.,
D. C. Eustice, and R. A. Jensen.
1979.
Biosynthesis of phenazine pigments in mutant and wild-type cultures of Pseudomonas aeruginosa.
J. Bacteriol.
138:846-852 |
| 11. | Cohn, L. A., A. Weber, T. Phillips, S. Lory, M. Kaplan, and A. Smith. 2001. Pseudomonas aeruginosa infection of respiratory epithelium in a cystic fibrosis xenograft model. J. Infect. Dis. 183:919-927[CrossRef][Medline]. |
| 12. |
Comolli, J. C.,
A. R. Hauser,
L. Waite,
C. B. Whitchurch,
J. S. Mattick, and J. N. Engel.
1999.
Pseudomonas aeruginosa gene products PilT and PilU are required for cytotoxicity in vitro and virulence in a mouse model of acute pneumonia.
Infect. Immun.
67:3625-3630 |
| 13. | Correa, N. E., C. M. Lauriano, R. McGee, and K. E. Klose. 2000. Phosphorylation of the flagellar regulatory protein FlrC is necessary for Vibrio cholerae motility and enhanced colonization. Mol. Microbiol. 35:743-755[CrossRef][Medline]. |
| 14. |
Ditta, G.,
S. Stanfield,
D. Corbin, and D. R. Helinski.
1980.
Broad host-range DNA cloning system for gram-negative bacteria: construction of a gene bank of Rhizobium melliloti.
Proc. Natl. Acad. Sci. USA
77:7347-7351 |
| 15. |
Dong, X.,
M. Mindrinos,
K. R. Davis, and F. M. Ausubel.
1991.
Induction of Arabidopsis defense genes by virulent and avirulent Pseudomonas syringae strains and by a cloned avirulence gene.
Plant Cell
3:61-72 |
| 16. | Drake, D., and T. C. Montie. 1988. Flagella motility and invasive virulence of Pseudomonas aeruginosa. J. Gen. Microbiol. 124:43-52. |
| 17. |
Essar, D. W.,
L. Eberly,
A. Hadero, and I. P. Crawford.
1990.
Identification and characterization of genes for a second anthranilate synthase in Pseudomonas aeruginosa: interchangeability of the two anthranilate synthases and evolutionary implications.
J. Bacteriol.
172:884-900 |
| 18. |
Galan, J., and A. Collmer.
1999.
Type III secretion machines: bacterial devices for protein delivery into host cells.
Science
284:1322-1328 |
| 19. | Goldberg, J. B., and T. Dahnke. 1992. Pseudomonas aeruginosa AlgB, which modulates the expression of alginate, is a member of the NtrC subclass of prokaryotic regulators. Mol. Microbiol. 6:59-66[CrossRef][Medline]. |
| 20. | Hanahan, D., and M. Meselson. 1983. Plasmid screening at high colony density. Methods Enzymol. 100:333-342[Medline]. |
| 21. |
Hartig, E., and W. G. Zumft.
1998.
The requirement of RpoN (sigma factor 54) in denitrification by Pseudomonas stutzeri is indirect and restricted to the reduction of nitrite and nitric oxide.
Appl. Environ. Microbiol.
64:3092-3095 |
| 22. | Hassan, H. M., and I. Fridovich. 1980. Mechanism of the antibiotic action of pyocyanine. J. Bacteriol. 141:1556-1563. |
| 23. |
Hendrickson, E. L.,
P. Guevera, and F. M. Ausubel.
2000.
The alternative sigma factor RpoN is required for hrp activity in Pseudomonas syringae pv. maculicola and acts at the level of hrpL transcription.
J. Bacteriol.
182:3508-3516 |
| 24. |
Hendrickson, E. L.,
P. Guevera,
A. Penaloza-Vazquez,
J. Shao,
C. Bender, and F. M. Ausubel.
2000.
Virulence of the phytopathogen Pseudomonas syringae pv. maculicola is rpoN dependent.
J. Bacteriol.
182:3498-3507 |
| 25. | Hoffmann, J. A. 1995. Innate immunity of insects. Curr. Opin. Immunol. 7:4-10[CrossRef][Medline]. |
| 26. | Huang, H.-C., R.-H. Lin, C.-J. Chang, A. Collmer, and W.-L. Deng. 1995. The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for hairpin Pss secretion that are arranged colinearly with Yersinia ysc homologs. Mol. Plant-Microbe Interact. 8:733-746[Medline]. |
| 27. | Hultmark, D. 1993. Immune reactions in Drosophila and other insects: a model for innate immunity. Trends Genet. 9:178-183[CrossRef][Medline]. |
| 28. |
Ishimoto, K. S., and S. Lory.
1989.
Formation of pilin in Pseudomonas aeruginosa requires the alternative sigma factor (RpoN) of RNA polymerase.
Proc. Natl. Acad. Sci. USA
86:1954-1957 |
| 29. |
Janakiraman, R. S., and Y. V. Brun.
1997.
Transcriptional and mutational analyses of the rpoN operon in Caulobacter crescentus.
J. Bacteriol.
179:5138-5147 |
| 30. |
Jander, G.,
L. G. Rahme, and F. M. Ausubel.
2000.
Positive correlation between virulence of Pseudomonas aeruginosa mutants in mice and insects.
J. Bacteriol.
182:3843-3845 |
| 31. |
Jin, S.,
K. Ishimoto, and S. Lory.
1994.
Nucleotide sequence of the rpoN gene and characterization of two downstream open reading frames in Pseudomonas aeruginosa.
J. Bacteriol.
176:1316-1322 |
| 32. |
Kessler, B.,
S. Marqués,
T. Köhler,
J. L. Ramos,
K. N. Timmis, and V. de Lorenzo.
1994.
Cross talk between catabolic pathways in Pseudomonas putida: XylS-dependent and-independent activation of the TOL meta operon requires the same cis-acting sequences within the Pm promoter.
J. Bacteriol.
176:5578-5582 |
| 33. | King, E. O., M. K. Ward, and D. E. Raney. 1954. Two simple media for the demonstration of phycocyanin and fluorescin. J. Lab. Clin. Med. 44:301-307[Medline]. |
| 34. | Klose, K. E., and J. J. Mekalanos. 1998. Distinct roles of an alternative sigma factor during both free-swimming and colonizing phases of the Vibrio cholerae pathogenic cycle. Mol. Microbiol. 28:501-520[CrossRef][Medline]. |
| 35. |
Kohler, T.,
S. Harayama,
J. L. Ramos, and K. N. Timmis.
1989.
Involvement of Pseudomonas putida RpoN factor in regulation of various metabolic functions.
J. Bacteriol.
171:4326-4333 |
| 36. |
Kustu, S.,
E. Santero,
J. Keener,
D. Popham, and D. Weiss.
1989.
Expression of sigma 54 (ntrA)-dependent genes is probably united by a common mechanism.
Microbiol. Rev.
53:367-376 |
| 37. | Lee, C. A. 1997. Type III secretion systems: machines to deliver bacterial proteins into eukaryotic cells? Trends Microbiol. 5:148-156[CrossRef][Medline]. |
| 38. | Lemaitre, B., E. Nicolas, L. Michaut, J.-M. Reichhart, and J. A. Hoffmann. 1996. The dorsoventral regulatory gene cassette spatzle/Toll/cactus controls the potent antifungal response in Drosophila adults. Cell 86:973-983[CrossRef][Medline]. |
| 39. |
Macaluso, A.,
E. A. Best, and R. A. Bender.
1990.
Role of the nac gene product in the nitrogen regulation of some NTR-regulated operons of Klebsiella aerogenes.
J. Bacteriol.
172:7249-7255 |
| 40. | Mahajan-Miklos, S., M. W. Tan, L. G. Rahme, and F. M. Ausubel. 1999. Molecular mechanisms of bacterial virulence elucidated using a Pseudomonas aeruginosa-Caenorhabditis elegans pathogenesis model. Cell 96:47-56[CrossRef][Medline]. |
| 41. |
Merrick, M. J.
1993.
In a class of its own the RNA polymerase sigma factor 54 ( N).
Mol. Microbiol.
10:903-909[Medline].
|
| 42. |
Merrick, M. J., and J. R. Coppard.
1989.
Mutations in genes downstream of the rpoN gene (encoding 54) of Klebsiella pneumoniae affect repression from 54-dependent promoters.
Mol. Microbiol.
3:1765-1775[CrossRef][Medline].
|
| 43. | Meyer, J., A. Neely, A. Stintzi, C. Georges, and I. A. Holder. 1996. Pyoverdin is essential for virulence of Pseudomonas aeruginosa. Infect. Immun. 64:518-523[Abstract]. |
| 44. |
Michaels, J.,
T. Van Soom,
I. D'hooghe,
B. Dombrecht,
T. Benhassine,
P. de Wilde, and J. Vanderleyden.
1998.
The Rhizobium etli tpoN locus: DNA sequence analysis and phenotypical characerization of rpoN, ptsN, and ptsA mutants.
J. Bacteriol.
180:1729-1740 |
| 45. | Mudgett, M., and B. Staskawicz. 1999. Characterization of the Pseudomonas syringae pv. tomato AvrRpt2 protein: demonstration of secretion and processing during bacterial pathogenesis. Mol. Microbiol. 32:927-941[CrossRef][Medline]. |
| 46. | Mudgett, M., and B. Staskawicz. 1998. Protein signaling via type III secretion pathways in phytopathogenic bacteria. Curr. Opin. Microbiol. 1:109-114[CrossRef][Medline]. |
| 47. | O'Toole, R., D. L. Milton, P. Horstedt, and H. Wolf-Watz. 1997. RpoN of the fish pathogen Vibrio (Listonella) anguillarum is essential for flagellum production and virulence by the water-borne but not intraperitoneal route of inoculation. Microbiology 143:3849-3859[Abstract]. |
| 48. |
Pier, G. B.,
G. Meluleni, and E. Neuger.
1992.
A murine model of chronic mucosal colonization by Pseudomonas aeruginosa.
Infect. Immun.
60:4768-4776 |
| 49. |
Plotnikova, J. M.,
L. G. Rahme, and F. M. Ausubel.
2000.
Pathogenesis of the human opportunistic pathogen Pseudomonas aeruginosa PA14 in Arabidopsis.
Plant. Physiol.
124:1766-1774 |
| 50. |
Powell, B. S.,
D. L. Court,
T. Inada,
Y. Nakamura,
V. Michotey,
X. Cui,
A. Reizer,
M. H. Saier, and J. Reizer.
1995.
Novel proteins of the phosphotransferase system encoded within the rpoN operon of Escherichia coli. Enzyme IIANtr affects growth on organic nitrogen and the conditional lethality of an erats mutant.
J. Biol. Chem.
270:4822-4839 |
| 51. | Preston, M. J., S. M. Fleiszig, T. S. Zaidi, J. B. Goldberg, V. D. Shortridge, M. L. Vasil, and G. B. Pier. 1995. Rapid and sensitive method for evaluating Pseudomonas aeruginosa virulence factors during corneal infections in mice. Infect. Immun. 63:3497-3501[Abstract]. |
| 52. |
Rahme, L. G.,
E. J. Stevens,
S. F. Wolfort,
J. Shao,
R. G. Tompkins, and F. M. Ausubel.
1995.
Common virulence factors for bacterial pathogenicity in plants and animals.
Science
268:1899-1902 |
| 53. |
Rahme, L. G.,
M. W. Tan,
L. Le,
S. M. Wong,
R. G. Tompkins,
S. B. Calderwood, and F. M. Ausubel.
1997.
Use of model plant hosts to identify Pseudomonas aeruginosa virulence factors.
Proc. Natl. Acad. Sci. USA
94:13245-13250 |
| 54. | Stevens, E. J., C. M. Ryan, J. S. Friedberg, R. L. Barnhill, M. L. Yarmush, and R. G. Tompkins. 1994. A quantitative model of Pseudomonas aeruginosa infection in injury. J. Burn Care Rehabil. 15:232-235[CrossRef][Medline]. |
| 55. | Stover, C. K., X. Q. Pham, A. L. Erwin, S. D. Mizoguchi, P. Warrener, M. J. Hickey, F. S. Brinkman, W. O. Hufnagle, D. J. Kowalik, M. Lagrou, R. L. Garber, L. Goltry, E. Tolentino, S. Westbrock-Wadman, Y. Yuan, L. L. Brody, S. N. Coulter, K. R. Folger, A. Kas, K. Larbig, R. Lim, K. Smith, D. Spencer, G. K. Wong, Z. Wu, and I. T. Paulsen. 2000. Complete genome sequence of Pseudomonas aeruginosa PA01, an opportunistic pathogen. Nature 406:959-964[CrossRef][Medline]. |
| 56. |
Tan, M. W.,
S. Mahajan-Miklos, and F. M. Ausubel.
1999.
Killing of Caenorhabditis elegans by Pseudomonas aeruginosa used to model mammalian bacterial pathogenesis.
Proc. Natl. Acad. Sci. USA
96:715-720 |
| 57. |
Tan, M. W.,
L. G. Rahme,
J. A. Sternberg,
R. G. Tompkins, and F. M. Ausubel.
1999.
Pseudomonas aeruginosa killing of Caenorhabditis elegans used to identify P. aeruginosa virulence factors.
Proc. Natl. Acad. Sci. USA
96:2408-2413 |
| 58. |
Totten, P. A.,
J. C. Lara, and S. Lory.
1990.
The rpoN gene product of Pseudomonas aeruginosa is required for expression of diverse genes, including the flagellin gene.
J. Bacteriol.
172:389-396 |
| 59. |
van Dijk, K.,
D. E. Fouts,
A. H. Rehm,
A. R. Hill,
A. Collmer, and J. R. Alfano.
1999.
The Avr (effector) proteins HrmA (HopPsyA) and AvrPto are secreted in culture from Pseudomonas syringae pathovars via the Hrp (type III) protein secretion system in a temperature- and pH-sensitive manner.
J. Bacteriol.
181:4790-4797 |
| 60. |
Woods, D. E.,
D. C. Straus,
W. G. Johanson, Jr.,
V. K. Berry, and J. A. Bass.
1980.
Role of pili in adherence of Pseudomonas aeruginosa to mammalian buccal epithelial cells.
Infect. Immun.
29:1146-1151 |
| 61. |
Wu, Z.-L.,
T. C. Charles,
H. Wang, and E. W. Nester.
1992.
The ntrA gene of Agrobacterium tumefaciens: identification, cloning, and phenotype of a site-directed mutant.
J. Bacteriol.
174:2720-2723 |
| 62. | Yahr, T. L., J. Goranson, and D. W. Frank. 1996. Exoenzyme S of Pseudomonas aeruginosa is secreted by a type III pathway. Mol. Microbiol. 22:991-1003[CrossRef][Medline]. |
This article has been cited by other articles:
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Appl. Environ. Microbiol. | Infect. Immun. | Eukaryot. Cell |
|---|---|---|
| Mol. Cell. Biol. | J. Virol. |