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Journal of Bacteriology, March 2001, p. 1787-1791, Vol. 183, No. 5
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.5.1787-1791.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
Characterization of the Catalytic Activities of the PhoQ
Histidine Protein Kinase of Salmonella enterica
Serovar Typhimurium
Martin
Montagne,
Alexandre
Martel, and
Hervé
Le
Moual*
Department of Pharmacology, Faculty of
Medicine, Université de Sherbrooke, Sherbrooke, Québec,
Canada J1H 5N4
Received 31 July 2000/Accepted 30 November 2000
 |
ABSTRACT |
Studies of Escherichia coli membranes that
were highly enriched in the Salmonella enterica serovar
Typhimurium PhoQ protein showed that the presence of ATP and
divalent cations such as Mg2+, Mn2+,
Ca2+, or Ba2+ resulted in PhoQ
autophosphorylation. However, when Mg2+ or Mn2+
was present at concentrations higher than 0.1 mM, the kinetics of PhoQ
autophosphorylation were strongly biphasic, with a rapid autophosphorylation phase followed by a slower dephosphorylation phase. A fusion protein lacking the sensory and transmembrane domains
retained the autokinase activity but could not be dephosphosphorylated when Mg2+ or Mn2+ was present at high
concentrations. The instability of purified [32P]phospho-PhoP in the presence of
PhoQ-containing membranes indicated that PhoQ also possesses
a phosphatase activity. The PhoQ phosphatase activity was stimulated by
increasing the Mg2+ concentration. These data are
consistent with a model in which Mg2+ binding to the
sensory domain of PhoQ coordinately regulates autokinase and
phosphatase activities.
 |
TEXT |
Two-component signal transduction
systems allow bacteria to adapt to changing environmental conditions by
modulating the transcription of specific genes. Two-component
systems usually are characterized by a transmembrane protein
histidine kinase and a cytoplasmic response regulator (reviewed in
references 19 and 22). Upon detection of environmental
stimuli through its sensory domain, the histidine protein kinase
autophosphorylates by transfer of the
-phosphoryl group from ATP to
a highly conserved histidine residue in the transmitter domain of the
protein (23). Through its N-terminal receiver domain, the
response regulator catalyzes the transfer of the phosphoryl group from
the conserved histidine residue to an invariant aspartate residue
(23). This results in the activation of the output domain
of the response regulator, which in most cases possesses DNA binding
properties and functions as a transcriptional regulator. In addition to
autokinase activity and phosphorylation of the response regulator, many
histidine protein kinases possess a phosphatase activity (1, 11,
17). The balance between autokinase activity and phosphatase
activity controls the level of phosphorylated response regulator
(14, 20, 24). However, it is not clear whether external
signals affect the autokinase activity and/or the phosphatase activity of histidine protein kinases (3, 12, 16).
In the case of the facultative intracellular pathogen Salmonella
enterica serovar Typhimurium, a two-component system that consists
of PhoP (the response regulator) and PhoQ (the histidine protein
kinase) has been shown to be a major regulator of virulence. By
repressing or activating the expression of more than 40 different genes, the PhoP/PhoQ system controls entry into epithelial cells, survival within macrophages, resistance to antimicrobial peptides, and
lipopolysaccharide modifications (reviewed in references 5 and
9). In contrast to many histidine protein kinases for which the
physiological ligand is still unknown, the PhoQ protein has been shown
to sense changes in the external concentration of Mg2+
(6, 7).
The PhoQ protein (487 amino acids) is organized into an N-terminal
periplasmic sensory domain flanked at both ends by transmembrane segments and a C-terminal cytoplasmic signaling domain. By analogy with
other histidine protein kinases, PhoQ is considered to be present at
the cytoplasmic membrane as a homodimer in which the kinase domain from
one subunit phosphorylates the conserved histidine residue in the
second subunit (2, 18). Upon depletion of external
Mg2+, a signal is propagated across the membrane by an
unknown mechanism, resulting in activation of the phosphorylation
cascade (6, 10). In this study, we expressed the S. enterica serovar Typhimurium PhoQ protein in Escherichia
coli and showed that the recombinant protein possesses both
autokinase and phosphatase activities.
Expression of PhoQ in membranes.
For expression of the PhoQ
protein of S. enterica serovar Typhimurium, the
phoQ gene was amplified by PCR and cloned into expression
vector pET-3a (Novagen) to generate plasmid pET-Q. E. coli BL21(
DE3)/pLysE cells, transformed with pET-Q,
were grown at 37°C in Luria-Bertani medium supplemented with the
appropriate antibiotics. Transcription of the phoQ gene was
induced at an optical density of
0.8 by adding 0.5 mM
isopropyl-B-D-thiogalactopyranoside (IPTG). Membranes were
prepared as described previously (15) and analyzed for
PhoQ production by sodium dodecyl sulfate-polyacrylamide gel
electrophoresis (SDS-PAGE). A protein that migrated on SDS-PAGE with
approximately the mobility expected for the phoQ gene
product (55 kDa) was detected in the membrane fraction of cells that
were induced by IPTG (approximately 10% of total membrane proteins) (data not shown). This protein was not detected in membranes prepared from uninduced cells. To establish that the overproduced protein corresponds to PhoQ, we constructed a vector encoding the PhoQ protein
fused to a C-terminal tag of six histidine residues (PhoQ-His) and
performed Western blot analysis by using a chromogenic conjugate directed against the His tag (Qiagen). As expected, the PhoQ-His protein (56 kDa) was detected by the chromogenic conjugate, whereas wild-type PhoQ, which does not harbor a His tag, was not recognized (data not shown).
Autokinase activity of PhoQ.
Autokinase assays were performed
by incubating PhoQ-containing membranes (12 µg of total membrane
protein) in a 15-µl total volume with 0.1 mM
[
-32P]ATP (10 Ci/mmol) in phosphorylation buffer (50 mM Tris-HCl [pH 7.5], 200 mM KCl, 0.1 mM EDTA, 10% glycerol)
supplemented with increasing concentrations of various divalent
cations. Reactions were carried out at 22°C and stopped by the
addition of SDS sample buffer. Samples were heated at 37°C for 5 min
and applied to 10% polyacrylamide gels. Dried gels were analyzed with
a PhosphorImager. Under these experimental conditions, the relationship
between incorporated radioactivity and the amount of membrane protein (8 to 32 µg) was linear, indicating that PhoQ was not in excess. The
radiolabeled product was identified as PhoQ since control membranes
prepared from E. coli BL21(
DE3)/pLysE cells transformed with the parent vector pET-3a were devoid of the phosphorylated species
(data not shown).
For autophosphorylation, histidine protein kinases require certain
divalent cations, mostly Mg2+, present in their cytoplasmic
catalytic domain (23). In the case of the PhoQ sensor
kinase, it has been shown that Mg2+ also binds to the
periplasmic sensory domain and transmits inhibitory signals to the
cytoplasmic catalytic domain (6, 7). Thus, we postulated
that high concentrations of Mg2+ might interfere with PhoQ
autophosphorylation in vitro. To explore the possibility, we determined
the kinetics of PhoQ autophosphorylation in the presence of increasing
concentrations of MgCl2. In the absence of added
MgCl2, PhoQ autophosphorylation was barely detectable (Fig.
1A). In the presence of 0.1 mM
MgCl2, PhoQ autophosphorylation reached a plateau within 5 min (Fig. 1A), and [32P]phospho-PhoQ was stable for at
least 20 min. When higher concentrations of MgCl2 (0.2 to
10 mM) were added to the reaction mixtures, kinetics of PhoQ
autophosphorylation were strongly biphasic, with a rapid phosphorylation phase followed by a slower dephosphorylation phase (Fig. 1A). At these concentrations of MgCl2, the initial
rates of PhoQ autophosphorylation were higher than that obtained in the
presence of 0.1 mM MgCl2. The levels of
[32P]phospho-PhoQ peaked within 30 to 45 s, and then
decreased with increasing concentrations of MgCl2 (Fig.
1A). These data are consistent with the idea that the early
phosphorylation phase is dependent on occupation of the C-terminal
catalytic Mg2+-binding site, whereas the slower
dephosphorylation phase results from the occupation of the N-terminal
sensory Mg2+-binding site.

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FIG. 1.
Time course of PhoQ autophosphorylation in the presence
of increasing concentrations of MgCl2. Autokinase assays
were performed at 22°C in a 15-µl volume of phosphorylation buffer
supplemented with MgCl2, as indicated. Reactions were
initiated by the addition of 0.1 mM [ -32P]ATP (10 Ci/mmol). At various time points, reactions were stopped by the
addition of 5 µl of 4× SDS sample buffer. Samples (10 µl) were
subjected to SDS-PAGE, and the amount of 32P associated
with PhoQ was quantitated with a PhosphorImager. (A) PhoQ-containing
membranes (12 µg of total protein) were autophosphorylated in the
absence ( ) or presence of 0.1 mM ( ), 0.2 mM ( ), 1 mM ( ), or
10 mM ( ) MgCl2. (B) The C-terminal catalytic
domain of PhoQ, MBP-PhoQ-cyto (8 µg), was autophosphorylated in
the presence of 0.1 mM ( ), 0.2 mM ( ), 1 mM ( ), or 10 mM ( )
MgCl2.
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|
To determine whether the N-terminal sensory domain of PhoQ was
responsible for the observed Mg
2+-induced
dephosphorylation, we constructed a vector encoding MBP-Q-cyto,
which
consists of the C-terminal catalytic domain of PhoQ (residues
247 to
487) fused to the maltose binding protein (MBP). MBP-Q-cyto
was
expressed in
E. coli and purified using an amylose-agarose
affinity column. In contrast to the membrane-bound PhoQ, MBP-Q-cyto
was
unable to autophosphorylate in the presence of 0.1 mM MgCl
2 but able to autophosphorylate at concentrations of MgCl
2
above
0.2 mM (Fig.
1B). This suggests that the isolated C-terminal
catalytic
domain of PhoQ may have a slightly lower affinity for
Mg
2+ than the intact protein. In contrast to what was
observed for
the membrane-bound PhoQ, high concentrations of
MgCl
2 (1 to 10
mM) did not promote the
dephosphorylation of MBP-Q-cyto (Fig.
1B). Thus, the N-terminal
sensory domain of PhoQ appears to be
required for the
Mg
2+-induced dephosphorylation observed for membrane-bound
PhoQ (Fig.
1A).
To examine the possibility that a contaminating
Mg
2+-dependent phosphatase was present in the
E. coli washed membranes, we examined
the stability of phosphorylated
MBP-Q-cyto in the presence of
E. coli control membranes
lacking PhoQ. MBP-Q-cyto (8 µg) was
first subjected to
autophosphorylation for 10 min in the presence
of 1 mM
MgCl
2. Then
E. coli membranes (12 µg of total
protein)
were added to the reaction mixtures. Reactions were stopped at
various time points and analyzed by SDS-PAGE. We found that the
phosphorylated PhoQ cytoplasmic domain was 87% stable over a 15-min
period (data not shown). From these data, it appears that the
presence
of a Mg
2+-dependent phosphatase present in
E. coli membranes cannot explain
the rapid dephosphorylation observed
for the membrane-bound PhoQ
at concentrations of MgCl
2
higher than 0.2
mM.
Autokinase activity of PhoQ in the presence of other divalent
cations.
Similarly, we determined the kinetics of PhoQ
autophosphorylation in the presence of increasing concentrations of
MnCl2, CaCl2, or BaCl2. Kinetic
data obtained in the presence of MnCl2 (data not shown)
were very similar to those obtained in the presence of
MgCl2 (Fig. 1A), indicating that Mn2+ is
also able to promote PhoQ dephosphorylation. In contrast, when
increasing concentrations of CaCl2 or BaCl2
were used, PhoQ autophosphorylation reached a plateau within
minutes and remained stable for at least 20 min (data not shown).
Thus, neither Ca2+ nor Ba2+ can induce the
dephosphorylation of PhoQ.
Chemical stability of the phospholinkage and autophosphorylation of
PhoQ-H277N.
To assess further the nature of the phosphorylated
residue, we examined the stability of the incorporated phosphate
following in vitro autophosphorylation under alkali and acidic
conditions. We found that the PhoQ phospholinkage was resistant to
treatment with 3 N NaOH but was highly sensitive to 1 N HCl treatment
(data not shown). Thus, the phosphorylated residue had the stability expected for an N-phosphorylated amino acid such as histidyl-phosphate (4). The His-277 residue of PhoQ corresponds to the highly conserved histidine residue found in all histidine protein kinases (19). To determine whether His-277 is the site of PhoQ
autophosphorylation, an asparagine residue was substituted for the
histidine by site-directed mutagenesis. Incubation of membranes
overproducing the resultant PhoQ-H277N mutant with [
-32P]ATP and
MgCl2 (0.1 mM), MnCl2 (0.1 mM),
CaCl2 (2 mM), or BaCl2 (2 mM) did not result in
phosphate incorporation (data not shown). This showed that residue
His-277 of PhoQ is critical for autophosphorylation. These results
taken together indicated that His-277 is the site of PhoQ autophosphorylation.
Phosphotransfer from PhoQ to PhoP.
To study the transfer of
phosphate from PhoQ to PhoP, we used membranes containing
[32P]phospho-PhoQ and PhoP-His (a PhoP variant that
possesses a C-terminal His tag). PhoP-His was expressed in
E. coli and purified by immobilized metal
affinity chromatography. PhoQ-containing membranes were first
autophosphorylated for 5 min at room temperature in the presence of
[
-32P]ATP and 0.1 mM MgCl2. To remove
unincorporated ATP, membranes were pelleted by high-speed
centrifugation at 625,000 × g for 10 min at 4°C,
washed twice with phosphorylation buffer, and resuspended in the same
buffer. Phosphotransfer reactions were performed by incubating purified
membranes containing [32P]phospho-PhoQ (12 µg of total
protein) in a 20-µl total volume with excess PhoP-His (4.2µg) in
phosphorylation buffer supplemented with MgCl2. At various
time points, reactions were stopped and analyzed by SDS-PAGE. A control
reaction in which PhoP-His was omitted was performed to verify that
[32P]phospho-PhoQ was stable during the reaction period
(Fig. 2A). Kinetics of phosphotransfer
were performed in the presence of increasing concentrations of
MgCl2. In all cases, the initiation of phosphotransfer
resulted in an extremely rapid dephosphorylation of PhoQ (Fig. 2A) and
a concomitant phosphorylation of PhoP-His (Fig. 2B). The
dephosphorylation of PhoQ was 75% complete within 15 s of the
phosphotransfer reaction (Fig. 2A). Increasing the concentration of
MgCl2 in the reaction mixtures resulted in slight increases
of the initial rates of PhoQ dephosphorylation (Fig. 2A) but decreased
the initial rates of PhoP-His phosphorylation (Fig. 2B). Thus, the
total amount of protein-bound radiolabeled phosphate decreased by
increasing the concentration of MgCl2. These data suggest
that high concentrations of Mg2+ stimulate the
dephosphorylation of PhoP-His, possibly through a phosphatase activity
associated to PhoQ.

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FIG. 2.
Phosphotransfer from PhoQ to purified PhoP-His.
PhoQ-containing membranes were first autophosphorylated and purified of
unincorporated ATP. Phosphotransfer assays were performed at 22°C in
a 20-µl volume of phosphorylation buffer supplemented with
MgCl2, as indicated. Reactions were initiated by mixing
purified membranes containing [32P]phospho-PhoQ
with purified PhoP-His. Reactions were stopped by the addition of
SDS sample buffer and analyzed by SDS-PAGE. Dried gels were exposed to
a PhosphorImager. Total levels of radioactivity present on PhoQ and
PhoP at the initial time of the phosphotransfer assay were considered
100 and 0%, respectively. (A) Time course of
[32P]phospho-PhoQ dephosphorylation. The phosphotransfer
reaction was performed in the absence of PhoP-His (×). Phosphotransfer
reactions were carried out in the presence of 1 mM ( ), 5 mM ( ),
and 10 mM ( ) MgCl2. (B) Time course of PhoP-His
phosphorylation. Phosphotransfer reactions were carried out in the
presence of 1 mM ( ), 5 mM ( ), and 10 mM ( ) MgCl2.
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|
PhoQ functions as a phosphatase for phospho-PhoP.
To
explore the possibility that PhoQ possesses phosphatase
activity, we examined the stability of purified
[32P]phospho-PhoP-His in the presence of PhoQ-containing
membranes. Phosphorylation of PhoP-His was achieved by incubating
membranes containing [32P]phospho-PhoQ and PhoP-His, as
described above. The reaction mixture was centrifuged at high-speed
(625,000 × g for 10 min at 4°C) to remove the
membrane fraction, and the supernatant containing [32P]phospho-PhoP-His was recovered. Unincorporated ATP,
ADP generated during the autokinase reaction, and MgCl2
were removed by buffer exchange into phosphorylation buffer using
centrifugal filter devices (Millipore). For the phosphatase assay,
excess of [32P]phospho-PhoP-His (4.2µg) was incubated
with either control membranes or PhoQ-containing membranes (12µg of
total protein) in phosphorylation buffer, in the presence of increasing
concentrations of MgCl2. At various time points, reactions
were stopped and analyzed by SDS-PAGE. A control reaction in which
[32P]phospho-PhoP-His was incubated with control
membranes lacking PhoQ indicated that
[32P]phospho-PhoP-His was stable during the reaction
period (Fig. 3). When
[32P]phospho-PhoP-His was incubated with PhoQ-containing
membranes, the amount of [32P]phospho-PhoP-His decreased
over time (Fig. 3). The rates of PhoP dephosphorylation were stimulated
by increasing the concentration of MgCl2 (Fig. 3). These
data indicate that PhoQ possesses phosphatase activity that is
regulated by Mg2+.

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FIG. 3.
Dephosphorylation of phospho-PhoP by PhoQ.
[32P]phospho-PhoP-His was purified from ATP, ADP, and
Mg2+ by high-speed centrifugation and ultrafiltration.
Phosphatase assays were performed at 22°C in a 20-µl volume of
phosphorylation buffer supplemented with MgCl2, as
indicated. Reactions were initiated by the addition of membranes.
At indicated time points, reactions were stopped by the addition
of SDS sample buffer. Samples (13 µl) were subjected to
SDS-PAGE, and the amount of 32P associated with PhoP-His
was quantitated with a PhosphorImager. The total radioactivity present
on PhoP at the initial time of the phosphatase assay was considered as
100%. Purified [32P]phospho-PhoP-His was incubated with
control membranes in the presence of 1 mM MgCl2 (×).
Purified [32P]phospho-PhoP-His was incubated with
PhoQ-containing membranes in the presence of 1 mM ( ), 5 mM ( ),
and 10 mM ( ) MgCl2.
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|
Concluding remarks.
In the present study, we examined the
catalytic activities of the S. enterica serovar Typhimurium
PhoQ histidine kinase and showed that like most histidine kinases, PhoQ
exhibits both autokinase and phosphatase activities. The main finding
of this study is that MgCl2 concentrations above 0.1 mM
affected the stability of [32P]phospho-PhoQ and
stimulated PhoQ dephosphorylation (Fig. 1A). Since
Mg2+-induced dephosphorylation of PhoQ was not observed
with the isolated transmitter domain (MBP-Q-cyto) (Fig. 1B), it appears
that Mg2+ promotes PhoQ dephosphorylation by binding to the
periplasmic sensory domain and signaling through the membrane. This
finding is in contrast to that from a study by Castelli et al.
(3), who found that MgCl2 concentrations
higher than 0.2 mM had no inhibitory effect on the autokinase activity
of PhoQ. The main variation in the experimental procedure that may
account for differences between the two studies is that Castelli et al.
used an S. enterica serovar Typhimurium strain for the
isolation of PhoQ-containing membranes, whereas we used an E. coil strain. One possibility is that a membrane-bound
Mg2+-dependent phosphatase is present in the E. coli washed membranes but absent from the S. enterica
membranes. This is unlikely, because we showed that the phosphorylated
transmitter domain of PhoQ (MBP-Q-cyto) is 87% stable over a 15-min
period after the addition of control E. coli membranes.
Moreover, it is unlikely that such a phosphatase is absent from
S. enterica, which is closely related to E. coli. However, we cannot rule out this possibility entirely.
Two possibilities could account for the Mg
2+-induced
dephosphorylation of PhoQ. One possibility is that conformational
alterations
upon Mg
2+ binding to the periplasmic domain
destabilize the PhoQ phospholinkage
by altering its molecular
environment. Another possibility is
that Mg
2+ binding
triggers a reverse autokinase reaction in which the phosphoryl
group is
transferred to ADP to form ATP. The fact that ADP, which
is generated
upon PhoQ autophosphorylation, is necessary to the
reverse autokinase
reaction would explain the biphasic kinetic
curves shown in Fig.
1A.
Such a reverse autokinase reaction has
been described previously for
other two-component systems (
8,
13,
21). Studies are under
way to further characterize the
mechanism by which Mg
2+
induces PhoQ
dephosphorylation.
In good agreement with Castelli et al. (
3), we found that
the phosphatase activity of PhoQ is stimulated by the concentration
of
MgCl
2. These results taken together are consistent with a
model
in which PhoQ responds to external ligands by modulating both
autokinase and phosphatase activities. Both the alteration of
the
autokinase activity and the increase of the phosphatase activity
would
result in decreased levels of phospho-PhoP and, in turn,
in the
repression of PhoP-activated genes. Similar conclusions
have been
reached for other histidine kinase sensors including,
FixL and NtrB
(
12,
16).
 |
ACKNOWLEDGMENTS |
This work was supported by grant MT-15551 from the Medical Research
Council of Canada and by a fellowship to H. Le Moual. from Fonds de la
Recherche en Santé du Québec, M. Montagne and A. Martel
were the recipients of fellowships from the Faculty of Medicine,
Université de Sherbrooke.
 |
FOOTNOTES |
*
Corresponding author. Mailing address: Department of
Pharmacology, Faculty of Medicine, Université de Sherbrooke,
Sherbrooke, Québec, Canada J1H 5N4. Phone: (819) 820-6856. Fax:
(819) 564-5400. E-mail:
herve.lemoual{at}courrier.usherb.ca.
 |
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Journal of Bacteriology, March 2001, p. 1787-1791, Vol. 183, No. 5
0021-9193/01/$04.00+0 DOI: 10.1128/JB.183.5.1787-1791.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.
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