Previous Article | Next Article ![]()
Journal of Bacteriology, October 2002, p. 5781-5788, Vol. 184, No. 20
0021-9193/02/$04.00+0 DOI: 10.1128/JB.184.20.5781-5788.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada T6G 2E9
Received 9 May 2002/ Accepted 15 July 2002
|
|
|---|
|
|
|---|
![]() View larger version (24K): [in a new window] |
FIG. 1. Schematic representation of the F tra region, including relevant promoters and genes as indicated. Arrows indicate positive regulatory effects, whereas black bars indicate negative regulatory effects. Plasmid-encoded gene products are shown in regular type, and host-encoded factors are shown in boldface. The drawing is not to scale. Further details are provided in the text.
|
A variety of signals can activate the Cpx stress response, including overexpression of the outer membrane lipoprotein NlpE (51), overexpression of misfolded P-pilus subunits (20), and elevated pH (36), among others. Overproduction of NlpE and P-pilus subunits cause an increased level of misfolded proteins in the cell envelope, which is thought to be the main activating signal of the Cpx system (41). Active, phosphorylated CpxR upregulates the transcription of several genes which are involved in protein folding and degradation in the bacterial envelope (8, 9, 20). Examples of such Cpx-activated targets are the periplasmic protease DegP (8, 39) and the periplasmic disulfide oxidase, DsbA (6, 20, 39).
cpxA* gain-of-function mutants were characterized by their ability to suppress the toxic effects of mislocalized and misfolded proteins in the cell envelope (5). cpxA* mutants exhibit up to a 10-fold increase in expression of targets of the Cpx regulatory pathway (8). Two distinct classes of cpxA* mutations have been characterized. The first class contains point or deletion mutations in the periplasmic sensing domain of the protein, which are believed to render CpxA "signal blind" (43). The effect of this condition is constitutive activation of CpxA and thus upregulation of both the cpxRA operon and its downstream targets (41, 42). The second class of cpxA* mutants contains point mutations in the cytoplasmic domain of CpxA. An example is cpxA101*, which contains a single amino acid change from threonine to proline at position 253, located near the putative site for autophosphorylation (43). This mutant retains its autokinase and kinase functions but has lost its phosphatase activity. The result is elevated levels of active, phosphorylated CpxR, shifting the Cpx regulon to a constitutively active state (43). cpxA* mutants exhibit numerous and varied phenotypes, including resistance to amikacin (40), sensitivity to elevated temperatures (31), and tolerance to elevated pH (7).
The cpxA mutation that was first shown to inhibit F transfer by Silverman et al. (48) was later identified as a constitutively activated gain-of-function mutation (43). The decrease of F transfer and reduction of TraJ expression (48) was therefore thought to be due to constitutive activation of the Cpx regulon. We have confirmed this observation by determining that F transfer and expression of several F tra regulatory proteins are significantly lowered in a well-defined cpxA* mutant background. Our results also demonstrate that activation of the cpxAR operon in a wild-type background mimics the negative effects on F transfer which result from a cpxA* mutation, suggesting that F transfer is sensitive to cell envelope stress. The observed effects were determined to be the result of posttranscriptional reduction of the level of cytoplasmic F regulatory protein, TraJ.
|
|
|---|
|
View this table: [in a new window] |
TABLE 1. Strains and plasmids used in this study
|
Construction of PBAD-Tra overexpression plasmids. Plasmid pRS27 (Table 1) was used as the template for PCR amplification of the traJ coding region of F by using the upstream primer 5'-CCATGGATCCGATGGATCGTAT-3' to introduce a NcoI site, and the downstream primer 5'-CTGCAGAATAATCAGAAAAGGT-3' to introduce a PstI site. Vent polymerase (NEB) was used to generate the ca. 750-bp PCR product, which was cloned into PstI/NcoI-digested pBAD24 in frame with PBAD. Positive clones were sequenced by using the DYEnamic ET fluorescent sequencing system (Amersham Pharmacia Biotech) to confirm that the entire and correct coding region of traJ was present in the plasmid. pBADTraY was constructed by using the same techniques, with the upstream primer 5'-GGCGGATCCATGGCAAAAAGATTTGGTACACG-3' and the downstream primer 5'-CGCGTCGACTAGAGTGTATTAAATGTTA-3'. pBADTraM was constructed by using the same techniques, with the upstream primer 5'-GGATCCATGGCTAAGGTGAACCTG-3' and the downstream primer 5'-GAATTCTTATTCATCATCATTTTTTG-3'.
Western immunoblot analysis. Cell pellets corresponding to optical density at 600 nm (OD600) equivalents of 0.1 were used in all immunoblot assays. Samples were boiled in sodium dodecyl sulfate (SDS) sample buffer (23) for 5 min, and the supernatants were electrophoresed on SDS-15% polyacrylamide gels by using the Bio-Rad Minigel system. Proteins were transferred to Immobilon-P membranes (Millipore) by using Towbin buffer (56). Membranes were blocked overnight at 4°C with 10% (wt/vol) skim milk (Difco) dissolved in TBST (50 mM Tris-HCl [pH 7.5], 150 mM NaCl, and 0.1% [vol/vol] Tween 20 [Caledon Laboratories]). Polyclonal antisera (raised in rabbits) were diluted (anti-TraJ, 1:15,000; anti-TraM, 1:5,000; anti-TraY, 1:2,000) in the same blocking solution and then added to the blots and incubated at room temperature for 1 h. Blots were washed at room temperature (four times 15 min) with TBST. Blots were incubated with the secondary antibody (1:10,000 horseradish peroxidase-conjugated donkey anti-rabbit immunoglobulin G [Amersham Life Sciences]), washed as described above, and then developed with Renaissance Western blot Chemiluminescence Reagent Plus (NEN) and exposed to Kodak X-Omat R film.
Stability of TraJ, TraM, and TraY. Cultures of various E. coli mutants containing the arabinose-inducible plasmids pBADTraJ/TraM/TraY were grown at 30°C in TSB supplemented with 1.0% (wt/vol) glucose and appropriate antibiotics to an OD600 of 0.6 to 0.9. Preinduction samples were collected, and these and all subsequent samples were frozen at -20°C until required. Then, 2-ml portions of the preinduction cultures were centrifuged and washed to remove antibiotics and glucose. Next, 0.1% (wt/vol) arabinose in 2 ml of fresh TSB was added to induce the expression of the tra proteins, and induction was carried out at 30°C for 50 min with agitation. The zero time sample was collected, and the induced culture was centrifuged and washed to remove arabinose. Then, 2 ml of fresh TSB containing 1.0% (wt/vol) glucose and 200 µg of rifampin (Sigma)/ml was added to prevent further expression from PBAD. Samples were collected at 15, 30, 60, and 120 min postinduction and subjected to immunoblot analysis as described above.
Northern blot analysis.
Total RNA was isolated via a modified hot phenol method as described earlier (19) from strains grown in liquid cultures at 30°C to an OD600 of 0.8 to 1.0. RNA (40 µg) was denatured, electrophoresed, and transferred to Zeta-Probe nylon membranes (Bio-Rad) as described previously (19). Blots to be probed for traJ were prehybridized at 58°C for 4 h as described elsewhere (45), except 200 µg each of boiled E. coli strain W tRNA type XX and sonicated calf thymus DNA (Sigma)/ml were added to the hybridization solution. Fresh hybridization buffer containing ca. 10 pmol of 32P-labeled FinP RNA (19) was added to the blots and incubated overnight at 58°C. Blots were washed as described previously (45) and then exposed on a Molecular Dynamics storage phosphor screen. Blots were then stripped at 70°C in 5 mM Tris-HCl (pH 8)-2 mM EDTA-0.1x Denhardt solution-0.1% SDS and prehybridized at 37°C for 4 h as described previously (19). The tRNASer-specific oligonucleotide probe JSA12 (45) and the FinP-specific probe primer A (19) were 5' end labeled with [
-32P]ATP (Perkin-Elmer), and ca. 10 pmol of each probe was added to the blots in fresh hybridization solution. Incubation proceeded overnight at 37°C, and washing and exposure were performed as described above. Bands corresponding to the traJ and FinP transcripts and tRNASer were quantified by using a Molecular Dynamics Phosphorimager 445 SI and ImageQuant software.
Bacterial matings. Donor strains containing pOX38-Km and the recipient strain XK1200 were grown in 2 ml of LB medium at 30°C with appropriate antibiotic selection to an OD600 of 0.6 to 1.0, and 1 ml of each donor culture was pelleted by centrifugation and resuspended in 0.9 ml of fresh LB medium to remove antibiotics. Then, 0.1 ml of recipient cells were added, and mating proceeded for 45 min at 30°C. Mating mixtures were vortexed vigorously for 30 s and placed on ice to disrupt mating pairs, and 10-fold serial dilutions (1 ml) in ice-cold 1x phosphate-buffered saline were performed. Next, 10 µl of each dilution was inoculated onto selective plates to select donors (kanamycin and streptomycin) and transconjugants (kanamycin and nalidixic acid). Plates were incubated overnight at 30°C, and donor and transconjugant colonies were counted. The ratio of transconjugants to donors was used to measure the efficiency of transfer of pOX38-Km from donors to recipients.
ß-Galactosidase assays. Cultures of the various E. coli strains containing either the parental control vector pMC874 or the PtraJ-lacZ reporter plasmid pMCJ211 were grown at 30°C in LB broth supplemented with the appropriate antibiotics to an OD600 of 0.6 to 1. Then, 100 to 300 µl of each culture was assayed for ß-galactosidase activity as described earlier (41), except the A420 value of each sample was determined by using a Bio-Rad Smartspec 3000. The ß-galactosidase activity was calculated as described by Miller (33).
|
|
|---|
![]() View larger version (32K): [in a new window] |
FIG. 2. F-encoded proteins TraJ, TraM, and TraY are not detectable in a cpxA101* background. Immunoblot analysis with polyclonal antisera directed against TraJ, TraM, and TraY was carried out. Lanes 1 and 2, E. coli MC4100 with (+) or without (-) pOX38-Km; lanes 3 to 5, cpxA (TR8), cpxR (TR51), and cpxA101* (TR189) strains containing pOX38-Km, resepctively. The positions of TraJ, TraM, and TraY are indicated on the right, and relevant molecular weight markers are indicated (in kilodaltons) on the left. The loading control indicated at the bottom of the figure is obtained from a protein that nonspecifically cross-reacts with the antiserum.
|
|
View this table: [in a new window] |
TABLE 2. Efficiency of pOX38-Km transfer from a variety of donor strains
|
![]() View larger version (34K): [in a new window] |
FIG. 3. Cell envelope stress induced by NlpE overexpression reduces TraJ and TraM levels. Immunoblot analysis with polyclonal antisera directed against TraJ and TraM was carried out. Lanes 1 to 3, wild-type (MC4100), cpxA101* (TR189), and degP (JMR201) E. coli containing pOX38-Km, respectively; lanes 4 and 5, E. coli MC4100 containing pOX38-Km and the control vector, pBR322, or pLD404, expressing NlpE. The positions of TraJ and TraM are indicated on the right, and the relevant molecular weight marker is indicated (in kilodaltons) on the left.
|
traJ transcription in various cpx backgrounds. To determine whether the lack of TraJ in the constitutively activated Cpx background was caused by transcriptional or posttranscriptional events, the PtraJ-lacZ reporter plasmid pMCJ211 (57) was used to test PtraJ activity by using ß-galactosidase assays in several cpx mutant strains (Fig. 4C). Compared to the wild-type strain MC4100, PtraJ activity was reduced by approximately twofold in both the cpxA and cpxR strains and approximately threefold in the cpxA101* strain.
![]() View larger version (46K): [in a new window] |
FIG. 4. Northern analysis and ß-galactosidase assays show that traJ and FinP transcripts are expressed in both wild-type and cpxA101* E. coli. (A) Relative levels of traJ mRNA and FinP antisense RNA expressed from pOX38-Km in various backgrounds. Lanes 1 and 2, E. coli MC4100 without (-) or with (+) pOX38-Km; lanes 2 to 4, pOX38-Km in cpxA101* (TR189), cpxR (TR51), and cpxA (TR8) strains. The positions of the traJ transcript and FinP antisense RNA are indicated on the right. (B) Northern analysis to show a direct comparison of traJ mRNA levels in wild-type and cpxA101* backgrounds. Lanes 1 and 2, MC4100 without (-) and with (+) pOX38-Km; lanes 3 and 4, cpxA101* (TR189) without (-) and with (+) pOX38-Km. The position of the traJ transcript and the loading control, tRNASer, are shown on the right. (C) PtraJ activity is reduced in several cpx mutants. ß-Galactosidase assays of MC4100 (lane 1), cpxA (lane 2), cpxR (lane 3), and cpxA101* (lane 4) carrying the PtraJ-lacZ reporter plasmid pMCJ211 were performed. Assays with the parental control plasmid resulted in insignificant levels of ß-galactosidase activity and are not included.
|
Stability of F-tra regulatory proteins expressed from a foreign promoter in a cpxA101* background. Since the traJ transcript but not the TraJ protein is detectable in the cpxA101* mutant, the fate of TraJ expressed from a foreign promoter was tested in order to further separate transcriptional from posttranscriptional effects. TraJ expression from the pBADTraJ overexpression vector was induced with arabinose for 50 min, and samples were collected at various times over a 2-h period after the 50-min induction from cultures to which rifampin and glucose were added to prevent further rounds of transcription. Bacterial lysates were subjected to SDS-polyacrylamide gel electrophoresis and immunoblot analysis to determine TraJ levels at each time point. TraJ was stable in the wild-type strain MC4100 over the duration of the experiment (Fig. 5A, compare lane 0 through lane 120). However, in the cpxA101* strain, TraJ levels began to decrease at 15 min after the addition of rifampin and steadily decreased with time. By 120 min postinduction, TraJ levels decreased by ca. 75% (Fig. 5A, compare lane 0 and lane 120). Similar results were observed with a cpxA24* mutant (data not shown). The stability of TraM expressed from the pBADTraM overexpression vector was assessed in the same manner (Fig. 5B). The level of TraM was significantly reduced in the cpxA101* strain, but TraM was stable over time (Fig. 5B, compare lane 0 through lane 120). The stability of TraY, expressed from the pBADTraY expression plasmid, was also examined (Fig. 5C). The level of TraY was slightly reduced in the cpxA101* strain compared to the wild-type strain, but TraY was stable over time in both strains (Fig. 5C, compare lane 0 and lane 120). Examination of the stability of an unrelated protein, glutathione S-transferase (GST), revealed that it was stable in both wild-type and cpxA101* backgrounds (data not shown). Together, these data suggest that the decreased level of TraJ in the cpxA101* strain was a specific phenomenon.
![]() View larger version (52K): [in a new window] |
FIG. 5. Stability of TraJ, TraM, and TraY expressed from a foreign promoter in cpxA101*. (A) Immunoblot analysis with polyclonal antiserum to detect TraJ expressed from the pBADTraJ overexpression vector. Lane 1, TraJ expressed from pOX38-Km in MC4100; lane 2, TraJ expressed from pBADTraJ under repressed conditions; lanes 3 to 7, TraJ expressed from pBADTraJ after induction by arabinose and subsequent inhibition of further rounds of transcription by the addition of glucose and rifampin. The number above each lane indicates the time (in minutes) at which each sample was taken after the addition of rifampin and glucose. The host strains tested are shown on the right, and the relevant molecular weight marker is shown (in kilodaltons) on the left. The loading control indicated at the bottom of the figure is obtained from a protein that nonspecifically cross-reacts with the antiserum. (B and C) Stability of TraM and TraY, respectively, expressed from the pBADTraM and pBADTraY overexpression vectors were examined as described in panel A.
|
![]() View larger version (20K): [in a new window] |
FIG. 6. recA and clpP lonA mutations do not rescue TraJ expression in the cpxA101* mutant. Immunoblot analysis with polyclonal antiserum directed against TraJ. Lanes 1 and 2, E. coli MC4100 without (-) or with (+) pOX38-Km; lanes 3 to 5, pOX38-Tc in cpxA101* (TR189), cpxA101* recA (TR981), and cpxA101* clpP lonA (TR984) strains. The position of TraJ is indicated on the right, and the position of the relevant molecular weight marker is shown (in kilodaltons) on the left. The loading control indicated at the bottom of the figure is obtained from a protein that nonspecifically cross-reacts with the antiserum.
|
|
|
|---|
The necessity for a functional Cpx regulon to correctly assemble P-pili in uropathogenic E. coli is hypothesized to reflect the requirement of the bacterium to sense and respond to envelope stress caused by physiological changes induced by the host response (18). Although correct folding and translocation of F pilin subunits to the inner membrane and assembly of the conjugative pilus is a requirement for F transfer (14, 27, 52), a fully functional Cpx regulon is not required for this process. Both cpxA and cpxR mutants displayed nearly wild-type levels of pOX38-Km transfer and normal expression of the F tra regulatory proteins TraJ, TraM, and TraY. Conversely, constitutive activation of the Cpx response regulator, CpxR, in a cpxA101* mutant (43) drastically reduced F transfer. Activation of the wild-type Cpx pathway induced by overproduction of the outer membrane lipoprotein NlpE (51) also resulted in decreased F plasmid transfer and TraJ and TraM expression. Although the effect of overproduction of NlpE on F transfer was not as severe as constitutive activation of the cpxRA operon in the cpxA101* strain, the results support the notion that activation of the wild-type CpxAR pathway by envelope stress downregulates TraJ expression and F transfer. Interestingly, the cpxR mutant (TR51) containing pOX38-Km became essentially nonviable when the NlpE-overexpression plasmid pLD404 was introduced into this strain (data not shown), suggesting that overexpression of NlpE induces envelope stress in E. coli that cannot be effectively combated in the absence of a functional Cpx pathway. Prevention of piliation and F transfer is desirable during times of actual or perceived stress, since this process requires a considerable investment in energy and metabolic resources and extensive alteration of the cell envelope (14, 59).
Examples of negative regulation of Cpx regulon targets include downregulation of expression of genes for motility (10, 22, 26) and chemotaxis (22) by active, phosphorylated CpxR. Expression of mRNA from the motAB-cheAW operon and swarming ability were shown to be reduced in a cpxA* strain in a CpxR-dependent manner (10). Phosphorylated CpxR was also shown to bind to its consensus recognition sequence found in the promoter region of the motAB-cheAW operon (11). However, these authors did not demonstrate whether this phenomenon was a function of the wild-type Cpx pathway. Our results provide evidence of another pathway that is downregulated by constitutive Cpx regulon expression. Further, we have shown that overproduction of NlpE (51) has the same effect on F transfer as constitutive activation of the Cpx pathway. No consensus CpxR binding site is present in the promoter region of traJ (14, 39), supporting the idea that TraJ reduction in a cpxA101* background is not controlled by transcriptional regulation. Both pilus and flagellum expression involve elaboration of extracytoplasmic protein appendages, which requires the secretion of protein subunits through the cell envelope (26, 52). Such processes may be inhibited when the Cpx pathway detects cell envelope stress.
TraJ expressed from pOX38-Km in a wild-type strain was found to be stable well into stationary phase and detectable in significant amounts in cultures grown for up to 24 h (15). However, the traJ transcript is unstable, short-lived, and found in only very low abundance (24). A low, basal level of traJ mRNA may therefore be sufficient to allow for enough stable TraJ to accumulate and exert positive activation on PY. Our results reveal that PtraJ activity was reduced by only two- to threefold in cpxA, cpxR, and cpxA101* backgrounds. Similarly, the level of traJ mRNA expressed from pOX38-Km was reduced by approximately threefold in a cpxA101* background, although in cpxA and cpxR strains traJ mRNA was found at a level very close to that expressed from pOX38-Km in wild-type MC4100. However, TraJ levels were observed to be vastly different in these strains, with TraJ being detectable in both cpxA and cpxR backgrounds at nearly wild-type levels but completely absent in a cpxA101* strain. Similarly, the cpxA101* strain exhibited severely reduced pOX38-Km transfer, whereas cpxA and cpxR strains exhibited only moderately reduced plasmid transfer efficiency. These results suggest that the decreased PtraJ transcription exhibited by all of the cpx mutants was not responsible for the lack of detectable TraJ and reduced F transfer in the cpxA101* strain. Although we cannot rule out minor transcriptional effects caused by the cpxA101* mutation, the data generally support a posttranscriptional level of control of TraJ in the cpxA101* mutant.
Examination of F TraJ, TraM, and TraY expressed from PBAD demonstrated that TraJ was unstable in the cpxA101* background. Interestingly, expression of all three proteins was reduced in the cpxA101* strain. These results suggest that a general reduction of expression from PBAD, or general mRNA instability, may occur in the cpxA101* strain. Alternatively, a reduction of the copy number of the PBAD overexpression vectors in this strain may lead to lower levels of expressed proteins, although no obvious difference in plasmid levels was evident (data not shown). The reduction of the level of TraM expressed from PBAD was markedly greater than the reduction of TraJ and TraY levels expressed from the same promoter. Several factors, such as alterations in local superhelical density or translational efficiency, might influence TraM expression and stability, which could account for this difference (47, 49).
Expression of FinP antisense RNA, part of the FinOP fertility inhibition system (Fig. 1) (reviewed in reference 14), affects F traJ transcription (21, 24) and is influenced by host-encoded factors such as Dam methylation and RNase E degradation of FinP (19, 55). No detectable increase in TraJ expression from the finP plasmid pSLF20 occurred in the cpxA101* mutant strain (data not shown), suggesting that the decreased TraJ level in a cpxA101* background is not influenced by FinP transcription. Recent microarray data (unpublished results) revealed that rne, which encodes RNase E, was downregulated in a cpxA101* strain; this could account for the increase in FinP expression.
Since TraJ is a cytoplasmic protein (14), the observed lack of accumulation of TraJ is most likely not directly attributable to the periplasmic protein folding and degradation pathways typically involved in response to cell envelope stress (6, 8). Constitutive expression of the Cpx regulon in the cpxA101* mutant may simply mimic the induction of cell envelope stress, resulting in a reduction of expression of F tra regulatory proteins. Reduced TraJ and TraM levels caused by NlpE overexpression in a wild-type background supports this idea. A cytoplasmic protein degradation pathway may be triggered by the Cpx regulon when envelope stress is induced and/or when the Cpx regulon is constitutively activated. Inner membrane transfer proteins such as TraA, TraB, TraD, and TraG might affect TraJ and TraM expression in a cpxA101* background by transducing the stress signal through the membrane and interacting with components of the Cpx regulon.
Preliminary microarray analysis revealed that several proteases, including RecA (25) and ClpP (28), were upregulated in the cpxA101* strain carrying pOX38-Km. The observation that filamentous growth, characteristic of cells experiencing induction of the SOS response, occurs in cpxA* mutants (38), coupled with our evidence of increased recA transcription in cpxA101* carrying pOX38-Km, prompted an examination of the potential involvement of RecA in destabilizing TraJ. Examination of TraJ expressed from F-derivative plasmid pOX38-Tc in a cpxA101* recA mutant background revealed that TraJ was not detectable, suggesting that the RecA proteolytic pathway was not involved in destabilizing TraJ. The stability of
prophages in TR189, as well as other varied cpx mutants (43), also suggests that the SOS pathway is not active in cpxA* mutants. Similarly, a cpxA101* clpP lonA strain carrying pOX38-Tc exhibited undetectable levels of TraJ, implying that the ClpP and LonA proteases were not involved in the reduction of TraJ expression in the cpxA101* mutant. Further work to examine the involvement of other E. coli cytoplasmic proteases in reducing F TraJ levels in the cpxA101* mutant is planned. Continued examination of the mechanisms involved in reducing F plasmid transfer in cpxA* mutants should provide insight into new physiological roles for the Cpx envelope stress response.
|
|
|---|
This article has been cited by other articles:
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Copyright © 2009 by the American Society for Microbiology. For an alternate route to Journals.ASM.org, visit: http://intl-journals.asm.org | More Info»