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Journal of Bacteriology, December 2002, p. 6410-6416, Vol. 184, No. 23
0021-9193/02/$04.00+0 DOI: 10.1128/JB.184.23.6410-6416.2002
Copyright © 2002, American Society for Microbiology. All Rights Reserved.
Institute of Microbiology, University of Warsaw, 02-096 Warsaw, Poland,1 Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland 207422
Received 19 June 2002/ Accepted 2 September 2002
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and ß chains of neisserial LOS. |
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The data presented in Fig. 1 summarize the genetic potential and reported carbohydrate structures that have been identified in Neisseria gonorrhoeae (7, 9, 10, 15, 18, 34-36). The genes responsible for the addition of most of these sugars have been defined genetically; loss of gene function results in the truncation of an LOS structure. Biochemical characterization of several of these gene products has been performed by measuring the incorporation of sugars from various UDP-sugars into a variety of synthetic carbohydrates. LgtA possessed broad substrate specificity towards
and ß galactosides. Depending on the acceptor, this enzyme could mediate the transfer of GlcNAc from UDP-GlcNAc and GalNAc from UDP-GalNAc (3). However, this broad specificity was not seen in vivo (27). The biochemical properties of LgtB and LgtC have been examined similarly (21, 30, 31). Both enzyme possessed the predicted galactosyltransferase activities.
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FIG. 1. Possible LOS structures seen in N. gonorrhoeae. The data in the figure are a compilation of published LOS structures. The question marks indicate that the structures have been identified, but the gene responsible for the addition and the exact chemical composition of the sugar remain unknown. The labels above the structures indicate various monoclonal antibodies that have been used as markers for the presence of various components that terminate with the indicated sugars. The genes predicted to be responsible for the various sugar additions are indicated in italic.
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We purified functional LgtE from Escherichia coli strains containing recombinant plasmids expressing LgtE and then used this recombinant enzyme to demonstrate its ability to modify various neisserial LOSs that possessed defined structures.
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lgtA
lgtFG+ have been characterized previously in this laboratory (24, 28). Escherichia coli strain DH5
MCR was obtained from Life Technologies (Rockville, Md.). Strain ER2566 [F-
- fhuA2 (lon) ompT lacZ::T7 geneI gal sulA11
(mcrC-mrr)114::IS10 R(mcr-73::mini-Tn10)2 R(zgb-210::Tn10)1 (Tets) endA1 (Dcm)] was obtained from New England Biolabs, Beverly, Mass. Plasmid pET15b was obtained from Novagen (Madison, Wis.). Neisseria strains were grown in standard gonococcal medium (designated GCP if broth and GCK if agar) (Difco laboratories) plus growth supplements (33) and 0.042% sodium bicarbonate if in broth or in a 37°C CO2 incubator. E. coli strains were grown on LB plates (23). Ampicillin was used at 50 µg/ml, spectinomycin at 50 µg/ml, and 5-bromo-4-chloro-3-indolyl-ß-D-galactopyranoside (X-Gal) at 35 µg/ml when selection or colorimetric detection was applied.
N. gonorrhoeae strain F62
lgtA
lgtF
rfaKlgtG+ was constructed by PCR amplification of the rfaK region with primers RFAK147 and RFAK3780 and cloning this fragment in the SmaI and HindIII sites of pK18up (25), giving pRFAK. A 458-bp DraI fragment, located within the coding sequence of rfaK was deleted from this plasmid, giving pRFAK
2-1. This deletion was introduced into F62
lgtA
lgtFlgtG+, giving rise to F62
lgtA
lgtF
rfaKlgtG+. All constructs were verified by PCR amplification of the desired region.
Chemicals, reagents, and enzymes. Restriction enzymes and T4 DNA ligase were purchased from New England Biolabs (Beverly, Mass.). All chemicals used for this study were reagent grade or better and were purchased from Sigma Chemical Co. (St. Louis, Mo.) unless otherwise specified. Tris-Tricine gels (16.5%) and running buffer were obtained from Bio-Rad Laboratories (Richmond, Calif.). The monoclonal antibody 3G9 was graciously provided by Peter Rice, Boston University, Boston, Mass.
LOS purification and analysis. LOSs were purified from broth-grown cells with acetone-powdered organisms by the hot phenol-water method (32). LOS was extracted with hot phenol-water and concentrated by lyophilization. Extractions were continued until the purified LOS gave a minimal absorbance when measured at 200 nm.
SDS-PAGE analysis. Approximately 0.1 µg of LOS was subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) on a 16.5% Tris-Tricine gel (from Bio-Rad) in Tris-Tricine running buffer following the protocol suggested by the manufacturer. The gel was fixed overnight in 40% ethanol-5% acetic acid, and the LOS was visualized by silver staining (29).
Western blot and colony blot analysis. After SDS-PAGE, LOSs were electrotransferred onto Immobilon-P membrane (Millipore Corp.) in a Tris-Tricine-methanol buffer (10 mM Tris [pH 8.3], 10 mM Tricine, 0.01% SDS, 20% methanol) at a constant voltage of 100 V for 1 h following the protocol provided by Bio-Rad Corp. After air drying for 1 h, the membrane was processed by the procedure described below for colony blot analysis.
For colony blot analysis, overnight colonies were transferred to a nitrocellulose membrane (Schleicher and Schuell, Keene, N.H.), incubated in buffer (20 mM Tris, 150 mM NaCl, 2% milk powder) to block all nonspecific binding sites, and screened for reactivity to the appropriate monoclonal antibody. Bound monoclonal antibodies were detected by reacting the nitrocellulose filter with monoclonal antibody and visualizing the bound antibody by reacting the blot with horseradish peroxidase-labeled goat anti-mouse immunoglobulin G.
Transformation. Recombinant DNA transformation into E. coli was done according to standard protocols (23). Recombinant DNA transformation into N. gonorrhoeae was done by resuspending T1 cells to a density of approximately 108 cells/ml in GCP broth containing 1x Kellogg's solution, 0.042% NaHCO3, 10 mM MgCl2, and 1 µg of the DNA of interest. Cells were incubated for about 5 h with shaking at 37°C. Cells were plated onto GCK plates containing spectinomycin.
PCR. PCR was used to generate the DNA fragments employed in gene cloning experiments and for mutant N. gonorrhoeae strain verification. Primers were made by Bioserve Biotechnologies (Laurel, Md.). DNA amplifications were performed with a PCR supermix kit (Life Technologies, Grand Island, N.Y.) following the procedure provided by the company. Purified chromosome DNA or plasmid DNA was used as the template. For strain construction verification, DNA was isolated directly from colonies by the following procedure. A small colony was added to 5 µl of 0.5 M NaOH, the cell mixture was allowed to incubate at room temperature for 10 min, and the solution was neutralized with 5 µl of 1 M Tris-HCl, pH 7.5. After adding 90 µl of H2O, 3 µl of this solution was used for PCR amplifications.
Cloning of lgtE and purification of LgtE.
A fragment of chromosomal DNA encoding the lgtE gene was obtained by PCR amplification of F62 chromosomal DNA with primers LGTE1 (5'-TTCCAACATATGCAAAACCACGTTATCAGC-3'; the NdeI site that was used for cloning is underlined) and LGTE2 (5'-ATGCATGGATCCCGCGGGAATGACAGTGTGTCCA-3'; the BamHI site that was used for cloning is underlined). The PCR product was cleaved with NdeI and BamHI and ligated into the expression vector pET15b that had been cleaved with the same enzymes. The ligation mixture was used to transform E. coli DH5
MCR, and individual transformants were screened for the presence of the appropriate recombinant plasmid.
Plasmid pET15b-lgtE was transformed into E. coli strain ER2566, and a single colony was used to inoculate 25 ml of Luria broth containing ampicillin. Cells were incubated with moderate shaking at 37°C until the optical density at 600 nm reached a value of 0.6. Isopropylthiogalactopyranoside (IPTG) was added to a final concentration of 1 mM, and incubations were continued at 25°C for 10 h. The cells were collected by centrifugation and resuspended in 1 ml of binding buffer (Novagen). Lysozyme was added to a final concentration of 100 µg/ml, and the mixture was incubated on ice for 60 min. Samples were frozen at -70°C and thawed and sonicated three times, each for 15 s. The cell extract was clarified by centrifugation for 30 min at 15,000 rpm in a Sorvall SS34 rotor. While the majority of LgtE protein was present as an insoluble fraction, soluble proteins were purified on a nickel column according to the protocols of the manufacturers (Novagen), resulting in pure LgtE protein. The enzyme was dialyzed against Tris-HCl (pH 7.5)-20 mM NaCl-1 mM EDTA-50% glycerol and stored at -20°C.
Galactosyltransferase assays. The standard reaction volume for galactosyltransferase assays was 30 µl and contained 50 mM MES (morpholineethanesulfonic acid) buffer (pH 7.3), 10 mM MnCl2, 10 µg of purified LOS or 5 x 106 whole cells, and 1.5 µg of purified LgtE protein. When radioactive substrates were employed, 0.2 nmol of UDP-[3H]Gal (17.8 Ci/mmol), UDP-[3H]Glc (25 Ci/mmol), or UDP-[14C]GlcNAc (266 Ci/mmol)] was added; when nonradioactive substrates were employed, compounds were added to a final concentration of 1 mM. The reaction mixes were incubated for at least 2 h at 30°C. The reactions were terminated by the addition of 10 µl of 20% SDS and heating at 70°C for 3 min.
For the separation of unincorporated radioactive material from LOS, reaction mixes were loaded onto 3-ml Sephadex G-100 columns (made from a Pasteur pipette and equilibrated with water). The columns were washed with water, and fractions of three drops were collected (the first three fractions contained six drops). LOS eluted at fractions 5 to 12, while the radioactive LOS started at fractions 18 to 20. Samples of fractions 5 to 15 (10 µl) were spotted on filter paper (1 cm by 1 cm) and dried, and the radioactivity was assayed by liquid scintillation counting. The total volume of all fractions containing radioactive LOS was measured and used to calculate the total transfer of radioactive substrate into the acceptor LOS structures.
Galactosyltransferase activity was also determined by autoradiography. LOS samples were radiolabeled and purified as above and then run in parallel on the same SDS-Tricine gel as described above. Half of the gel was stained for visualization of the LOS with a standard silver-staining procedure, while the second half of the gel was soaked in sodium salicylate (1 M, pH 6.0) for 30 min. The gel was placed on 3MM Whatman paper, dried for 10 min on air, covered with Saran paper, and subjected to autoradiography.
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FIG. 2. SDS-PAGE of purified LgtE. E. coli strains were grown to mid-log phase, and LgtE expression was induced by the addition of IPTG. Recombinant proteins were purified on a nickel column. Lane 1, molecular size markers; lanes 2 and 3, purified enzyme (two consecutive fractions obtained after elution from the column). The sizes of the molecular mass markers are given in kilodaltons. A single protein of 35 kDa was present in the preparation.
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Biochemical properties of the enzyme.
Optimal conditions for assaying the galactosyltransferase activity of LgtE were determined, with UDP-[3H]galactose as the substrate and purified F62
lgtA
lgtE LOS as the acceptor. Strain F62
lgtA
lgtE expresses a single LOS molecule that possesses a single glucose on the
-chain and a phosphate as the ß-chain (28). The purified enzyme showed an absolute dependence on the presence of Mn2+. In the presence of Mg2+, less then 10% of the maximal activity was observed; in the presence of other divalent ions, minimal activity was observed (activity with no cation or 15 mM Mg2+, Ca2+, and Zn2+ was <1, 8, <1, and <1%, respectively, of that with Mn2+). The maximum activity was obtained at pH 7.5 (Fig. 3) and 30°C (data not presented).
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FIG. 3. Effect of pH on activity of recombinant LgtE. The activity was assayed with 1.5 µg of LOS purified from N. gonorrhoeae strain F62 lgtA lgtE as an acceptor under standard incubation conditions except for the variation in buffer pH.
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FIG. 4. Linearity over time of the reaction catalyzed by recombinant LgtE. Standard assay conditions were employed with 1.5 µg of LOS purified from N. gonorrhoeae strain FA62 lgtA lgtE.
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Acceptor specificity.
The genetic data indicate that the natural acceptor for LgtE should be the LOS structure present in strain F62
lgtA
lgtE and that the activity of this enzyme should be the addition of a galactose to the
-chain glucose. The LOS structure present in the wild-type strain F62 lacks a free
- or ß-chain glucose; hence, it should not be an acceptor for LgtE.
To test this prediction, we used the LOS isolated from several derivatives of N. gonorrhoeae strain F62 and from N. subflava 44. The data showed that LgtE could mediate the addition of radiolabeled Gal to LOS isolated from a variety of strains in addition to the one that possessed an LOS structure that was predicted to be the biosynthetic intermediate (LOS from strains F62, F62
lgtA
rfaK
lgtF, F62
lgtA
lgtG, and 44 showed 80, 70, 50, and 50%, respectively, of the strain F62
lgtA
lgtE LOS acceptor specificity). The efficiency of transfer of Gal residues to F62
lgtA
lgtE and F62 showed the same efficiency in the reactions containing decreased concentrations of acceptor LOS structures (Fig. 5).
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FIG. 5. Dependence of efficiency of transfer of donor UDP-Gal residue to different concentrations of LOS structures isolated from strains F62 lgtA lgtE and F62. The ability of the LgtE protein to transfer galactose to various concentrations of LOS was determined by incubating different concentrations of LOS in 30 µl of reaction buffer (50 mM MES buffer [pH 7.3], 10 mM MnCl2, and 1 mM UDP-galactose). The reaction mixes were incubated for 2 h at 30°C, and reactions were terminated by the addition of 10 µl of 20% SDS and heating at 70°C for 3 min. Triangles, LOS from F62; squares, LOS from F62 lgtA lgtE.
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As an alternative approach to demonstrating the addition of galactose to neisserial LOSs, we used unlabeled UDP-galactose as a substrate and various LOS acceptors as recipients. Strain F62
lgtA
lgtE expresses an LOS structure that is the natural acceptor for LgtE. The data presented in Fig. 6A (lanes 4 and 6) indicated that LgtE was able to modify the LOS expressed by F62
lgtA
lgtE. These data indicate that under the experimental conditions that we employed, LgtE appeared to mediate the addition of multiple galactose residues.
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FIG. 6. Transfer of galactose into neisserial LOS. The ability of the LgtE protein to transfer galactose to various LOS structures was determined by incubation in 30 µl of reaction buffer (50 mM MES buffer [pH 7.3], 10 mM MnCl2, 5 x 106 whole cells, and 1 mM UDP-galactose). The reaction mixes were incubated overnight at 30°C, and reactions were terminated by the addition of 10 µl of 20% SDS and heating at 70°C for 3 min. Then 10 µl of each reaction mix was analyzed on a 16.5% Tris-Tricine gel. (A) The lanes represent LOS isolated from: 1, F62 lgtA; 2, F62 lgtA lgtE; 3, F62 lgtA lgtE incubated with reagents minus LgtE; 4, F62 lgtA lgtE plus 1 µl of LgtE preparation; 5, F62 lgtA lgtE incubated with reagents minus LgtE; 6, F62 lgtA lgtE plus 7 µl of LgtE preparation. (B) The lanes represent LOS isolated from: 1, F62 rfaKA; 2, F62 rfaK incubated with reagents plus 7 µl of LgtE preparation; 3, F62 lgtA; and 4, F62 lgtA lgtE. (C) The lanes represent: 1, F62 lgtA; 2, N. subflava 44; 3, N. subflava 44 incubated with LgtE; and 4, F62 lgtA lgtE.
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lgtA
rfaK
lgtF LOS was able to serve as an acceptor for galactose from UDP-galactose. Since this strain's LOS is truncated and contains only two heptoses, it should not possess the acceptor structure for LgtE. In an effort to visualize this addition, whole cells were incubated with purified LgtE as described above. The data presented in Fig. 6B, lane 2, clearly show that incubation of whole cells with LgtE resulted in the appearance of a new LOS band. Since the mobility of this band was slower than that of LOS isolated from F62
lgtA, this suggests that this LOS has had three or more galactose moieties added to it. However, only a small percentage of the molecules were acted upon by LgtE. While the addition of galactose to this acceptor was unexpected, the addition of multiple galactose moieties is consistent with the data in Fig. 6A.
In order to determine if LgtE mediated the addition of galactose to both the
and ß chains of gonococcal LOS, we tested whether purified LgtE was able to modify LOS isolated from N. subflava strain 44. This strain makes two LOS structures, with the smaller LOS structure possessing a glucose on both the
and ß chains (28). LOS isolated from this strain fails to bind monoclonal antibody 3G9; reactivity with this monoclonal antibody requires that the
and ß chains consist of lactose (35). The data presented in Fig. 6C indicate that LgtE was able to modify the LOS expressed by N. subflava 44.
In order to determine if LgtE added galactose to both chains of the LOS expressed by N. subflava 44, we used our in vitro assay to modify LOS isolated from this strain and then tested the reaction product for its acquisition of reactivity with various monoclonal antibodies. The data presented in Fig. 7A indicate that while F62
lgtA
lgtE LOS could be modified by purified LgtE and that these reaction products now bound monoclonal antibody 2-1-L8, the resulting reactants failed to bind monoclonal antibody 3G9 (Fig. 7B). N. subflava 44 LOS, when modified in vitro, clearly acquired the ability to bind both monoclonal antibodies. From these data, we concluded that LgtE is able to mediate the addition of galactose to both the
and ß chain glucose moieties.
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FIG. 7. Reactivity of in vitro-modified LOS with various monoclonal antibodies. Cells were incubated with purified LgtE (1 or 7 µl) plus UDP-galactose in standard reaction buffer, and an aliquot was spotted onto a nitrocellulose filter. Reactivity to various monoclonal antibodies was determined with our colony-blotting procedure. (A) Samples exposed to monoclonal antibody 2-1-L8. (B) Samples exposed to monoclonal antibody 3G9.
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-chain has been identified (11). The biochemical functions of LgtABCD have been demonstrated and correspond to the functions inferred from analysis of mutations in these genes (3, 30, 31). While there is significant genetic evidence supporting the function of LgtE as the glycosyltransferase responsible for the addition of galactose ß-1,4 to glucose (6, 11, 14, 26), biochemical data supporting this assignment have been lacking. Furthermore, since the addition of galactose ß-1,4 to glucose can occur on both the
and ß chains, it is unclear if LgtE is responsible for both of these biosynthetic processes.
Erwin et al. (6) demonstrated that galactose was not added to either the
or ß chains in lgtE mutants. While their data clearly indicated that LgtE activity is required for galactose addition, the results could not rule out the possibility that the ß-chain addition of galactose was mediated by an additional unlinked enzyme whose activity required before the addition of the
-chain galactose could occur. As a first step in characterizing the lgtE gene product, we used a gene cloning strategy to isolate a functional LgtE protein. While we were readily able to isolate seemingly intact DNA fragments into a lac-regulated expression vector, most of the recombinant clones failed to express detectable levels of protein, even after induction with IPTG. Furthermore, expressing clones seemed to lose the ability to express the protein after prolonged incubation or storage. While we did not investigate the reason for this instability, we believe that it is probably related to the fact that the LgtE protein is able to modify LPS biosynthesis intermediates in E. coli and the accumulation of these modified intermediates is toxic.
Strain F62
lgtA
lgtE produces an LOS that contains a single glucose on the
-chain and a single phosphate as the ß-chain (28). As such, this strain produces an LOS with the predicted acceptor structure for LgtE. The data shown above and in Fig. 6 demonstrated that this LOS can serve as an acceptor for galactose from UDP-galactose. Surprisingly, many other LOS structures were also able to serve as acceptor molecules for LgtE. Furthermore, in our in vitro experiments, multiple LOS bands were obtained after incubation of F62
lgtA
lgtE LOS with purified LgtE and UDP-galactose. The SDS-PAGE profile of the elongation product suggests that two galactose residues are added to F62
lgtA
lgtE LOS.
The ability of LgtE to add galactose to a variety of LOS structures was unexpected. Most surprising perhaps was its ability to add sugars to LOS isolated from F62
lgtA
rfaK
lgtF. The oligosaccharide of this LOS consists of two heptose molecules, and elongation of this LOS by LgtE in vivo has not been reported. Furthermore, when galactose is added to the base oligosaccharide, the resulting band has an SDS-PAGE mobility consistent with the addition of three galactose residues. These data indicate that, depending on the nature of the starting LOS, two or three galactose residues were added.
By varying the amount of LgtE added to the reaction mixture, we could change the relative ratio of the elongation product; more enzyme increased the intensity of the higher-molecular-weight components (data not shown). Since the aberrant additions only occurred during in vitro reactions and were influenced by the amount of exogenous LgtE added, this suggests that, in vivo, the amount of enzyme expressed is quite small. Additional studies from our laboratory indicate that this hypothesis is correct (D. C. Stein, unpublished observations).
Wakarchuk and coworkers demonstrated that purified LgtE was unable to add galactose to synthetic ß-Glc acceptors (30). In light of our observation that LgtE is able to mediate addition to a variety of molecules that possess a lipid base, the failure observed by Wakarchuk et al. was most likely due to the inability of the synthetic intermediates to form a stable interaction with LgtE.
Certain LOS immunotypes of N. meningitidis possess LOSs with variations in the structure of the
-chain. The observation that an excess amount of LgtE in a reaction results in homopolymer additions suggests a mechanism that can explain how the L5 LOS immunotype might arise. If LgtF were overexpressed, it might result in the addition of a second glucose residue at the base of the
-chain. It is interesting that the LOS isolated from L5 strains possesses a significant amount of a truncated biosynthetic product on SDS-PAGE gels. This may reflect a limitation in the ability of LgtE to add galactose to the diglucosyl structure.
The ability of purified LgtE to modify LOS isolated from N. subflava 44 to reactivity with monoclonal antibody 3G9 clearly indicates that LgtE is able to mediate the addition of galactose to the ß-chain. Since LgtG-expressing strains that express LgtA (N. gonorrhoeae 15253 and F62lgtG+) do not add sugars to the ß-chain beyond the galactose, this indicates that LgtA possesses a structural requirement that biases its addition to the
-chain. It is possible that overexpression of LgtA could result in the elongation of both the
and ß chains, similar to what we have seen with LgtE. Since the level of expression of the various glycosyltransferases in the gonococcus is quite low (D. C. Stein, unpublished observations), this further suggests an additional mechanism of phenotypic modulation, where subtle changes in the growth rate of the organism would modulate the absolute level of the various proteins, and these results would be translated into small differences in LOS expression. It has been shown by several investigators that alteration in growth conditions affects LOS expression (8, 19, 20, 22), and we believe that this modulation is due to small changes in the levels of the various glycosyltransferases.
We thank Anne Corriveau for excellent technical assistance.
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3Gal and GalNAc ß1
3Gal linkages. Glycobiology 9:1061-1071.
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