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Journal of Bacteriology, February 2003, p. 1001-1009, Vol. 185, No. 3
0021-9193/03/$08.00+0 DOI: 10.1128/JB.185.3.1001-1009.2003
Copyright © 2003, American Society for Microbiology. All Rights Reserved.
Department of Molecular Microbiology and Biotechnology, George S. Wise Faculty of Life Science, Tel Aviv University, Tel Aviv 69978, Israel
Received 1 July 2002/ Accepted 21 October 2002
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Recently, the genes encoding the biosynthetic pathway of apoemulsan were sequenced and localized to a single gene cluster, the wee cluster, consisting of 20 open reading frames (25). Three genes of this cluster, wza, wzb, and wzc, were predicted from sequence homology to be involved in the assembly of emulsan on the cell surface (25). Multimers of the E. coli Wza homologue have been proposed to form an outer membrane pore through which the capsular antigen is translocated (8). Wzc homologues, members of the MPA1 family, were shown to autophosphorylate protein tyrosine kinases localized to the inner membrane (14, 20, 27, 38). These proteins contain an ATP-binding motif, which is necessary for tyrosine phosphorylation (6, 23, 26, 41). Wzb homologues were demonstrated to be protein tyrosine phosphatases (3, 15, 38, 39), capable of dephosphorylating Wzc (38, 39).
In this work we show that Wzb and Wzc of RAG-1 constitute a protein tyrosine phosphatase and an autophosphorylating protein tyrosine kinase, respectively. Based on the analysis of wzb and wzc mutations, we propose a model for the involvement of Wzb and Wzc in emulsan biosynthesis.
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TABLE 1. Bacterial strains and plasmids used in this study
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General DNA manipulations. A DNA High Pure plasmid isolation kit (Roche) was used for small-scale plasmid isolations. The High Pure PCR product purification kit (Roche) was used for the purification of PCR products and DNA from agarose gel. All restriction enzymes (Fermentas), T7 DNA polymerase (Takara), and alkaline phosphatase and T4 DNA ligase (Roche) were used as recommended by the manufacturers. Transformation of E. coli and A. lwoffii strains was performed as described previously (33). Southern hybridization was performed using the DIG-High prime DNA labeling kit (Roche). Sequencing was performed using an ABI 377 DNA sequencing apparatus (Perkin-Elmer).
Construction of pDLG1, the wzc expression plasmid. One PCR was performed to amplify the promoter region of the bla gene of pWH1274 using primers WHP1 and WHP2, and one was performed to amplify the wzc gene of RAG-1 using primers WHC1 and WHC2. The sequences of the primers are listed in Table 2. The fragment containing the bla promoter region was cut with ClaI and NcoI, and the fragment containing wzc was cut with BspHI and PstI. Both fragments together were ligated into a ClaI/PstI-linearized pWH1274 plasmid. In the resulting pDLG1 plasmid, wzc is under the control of the bla promoter.
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TABLE 2. Primers used in this study
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Constructing chromosomal deletions and point mutations. Two plasmids were constructed to create internal deletions of both wzb and wzc. The sequences of the primers are listed in Table 2. Plasmid pJPdel-wzb was constructed by PCR amplification of two fragments using primers DLB1 and DLB2 (the region upstream of wzb) and primers DLB3 and DLB4 (the region downstream of wzb). The first fragment was cut with EcoRI and NotI, and the second fragment was cut with BamHI and NotI, and both were ligated into an EcoRI/BamHI-linearized pJP5603 plasmid. The resulting plasmid contained the sequence coding for the first 11 amino acids and the last 19 amino acids of Wzb lacking the internal portion of the gene. Plasmid pJPdel-wzc was constructed by PCR amplification of two fragments using primers DLC1 and DLC2 (the region upstream of wzc) and primers DLC3 and DLC4 (the region downstream of wzc). The first fragment was cut with XbaI and NotI, and the second fragment was cut with EcoRI and NotI; both were ligated into an XbaI/EcoRI-linearized pJP5603 plasmid. The resulting plasmid contained the sequence coding for the first 4 amino acids and the last 6 amino acids of wzc lacking the internal portion of the gene.
Defined point mutations in wzc were constructed using overlap-extension PCR as described previously (18). Two fragments were amplified using primers FPY1 and FPY2 (the region upstream of the tyrosine cluster) and primers FPY3 and DLC4 (the region downstream of the tyrosine cluster). Another amplification was done using primers FPY1 and DLC4 and both PCR fragments as template. In the resulting fragment, five tyrosine codons at the C terminus of wzc were converted to phenylalanine codons. This fragment was cut with XbaI and EcoRI and ligated into an XbaI/EcoRI-linearized pJP5603 plasmid, which resulted in plasmid pJPdel-5Y.
These plasmids were used to transform RAG-1. Kanamycin-resistant transformants were isolated and subsequently screened for the subsequent loss of kanamycin resistance after growth without selectable marker. Defined in-frame deletions and point mutations were confirmed using appropriate PCRs, Southern analysis, and DNA sequencing (data not shown).
Purification of Wzb and Wzc. E. coli BL21(pET14b-wzb) cells were grown in Luria-Bertani medium containing ampicillin at 37°C to an optical density at 600 nm (OD600) of 0.5 to 0.6. Induction was started by adding 0.4 mM IPTG (isopropyl-ß-D-thiogalactopyranoside) followed by incubation for 3 h. His-tagged Wzb was purified according to the "pET System Manual" of Novagen. The protein was eluted with 250 mM imidazole, dialysed 12 h against TBS (150 mM NaCl, 20 mM Tris [pH 7.5]), and stored in 50% (vol/vol) glycerol at -20°C.
Wzc expression by E. coli BL21(pET14b-wzc) was done as described for CelG of C. cellulolyticum (10). His-tagged Wzc was purified similarly to Wzb except that 0.1% (vol/vol) Triton X-100 was added to the lysate after sonication and elution was done with 500 mM imidazole. Wzc was purified freshly before every experiment.
Western immunoblotting. Bacterial cell lysates from overnight A. lwoffii cells grown on ethanol-minimal salts medium were separated on sodium dodecyl sulfate (SDS)-10% polyacrylamide gels (22) prior to transfer onto nitrocellulose (37). The nitrocellulose filters were incubated with either antiphosphotyrosine antibodies (PT-66; Sigma) at a dilution of 1:2,000 or polyclonal mouse anti-Wzc of A. lwoffii RAG-1 antiserum (1:200). Mouse anti-Wzc antiserum was obtained following immunization of BALB/c female mice with purified His-tagged Wzc. The filter was then incubated with peroxidase-conjugated rabbit anti-mouse immunoglobulin G antibodies (Jackson Immunoresearch) and reacted with ECL reagent (Amersham). Low-range prestained SDS-polyacrylamide gel electrophoresis (PAGE) standards (Bio-Rad) were used as molecular weight markers.
In vitro phosphorylation assay of Wzc.
Monitoring autophosphorylation of Wzc using [
-32P]ATP was performed as described previously (20). Aliquots were taken at different time points and used for analysis by SDS-PAGE. The gel was dried using a model 583 gel dryer (Bio-Rad), and a film was exposed to the dried gel for the appropriate time and developed.
Phosphoamino acid analysis.
Purified Wzc was labeled in vitro with [
-32P]ATP or [
-32P]ATP as described above. Labeled Wzc was hydrolyzed and analyzed by ascending thin-layer chromatography (TLC) (TLC cellulose; Merck Inc.) as described previously (9, 20). Phosphoserine, phosphothreonine, and phosphotyrosine (Sigma) were used as markers and visualized as described previously (9).
Phosphatase activity of Wzb. Acid phosphatase activity was monitored at 30°C by using the continuous method based on the cleavage of p-nitrophenyl phosphate (PNPP) previously described (38).
Dephosphorylation of Wzc was monitored by Western hybridization. Wzc was incubated with and without Wzb as described (38). Aliquots were taken at the appropriate time and analyzed by Western hybridization using antiphosphotyrosine antibodies.
Standard assay for emulsan activity. Cell-free emulsifying activity was determined by the standard assay as described previously (31). One unit of emulsan activity per ml was defined as that amount which increases turbidity by 100 Klett units.
Galactosamine content. Galactosamine content was determined using indole after deamination with nitrous acid (1). Cell-associated galactosamine was determined on a concentrated cell suspension. The cells were washed once in cold distilled water and resuspended (OD600 = 10).
Separation of polysaccharides on SDS-polyacrylamide gel. Samples of the supernatant and the resuspended cells (OD600 = 10) of each strain were prepared as described previously (21) and separated by SDS-6% PAGE (22). Polysaccharides were stained with Alcian blue (Sigma) as described previously (21). Broad-range prestained SDS-PAGE standards (Bio-Rad) were used as molecular weight markers.
Composition of high-molecular-mass polymer from LN503 and A. lwoffii RAG-1. Emulsan and the high-molecular-mass polysaccharide produced by LN503 were isolated, purified, and deproteinized as described previously (43). Following acid hydrolysis the hydrolysates were analyzed by TLC (43).
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FIG. 1. Presence of phosphorylated Wzc in various A. lwoffii RAG-1 mutants. Lysates of the RAG-1 mutants were immunoblotted using antiphosphotyrosine antibodies (PT66) as described in Materials and Methods. Lane 1, wild-type RAG-1; lane 2, LN201; lane 3, LN401.
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-32P]ATP. At various times, samples were removed and subjected to SDS-PAGE, and the gel was subjected to autoradiography. It can be seen from the autoradiogram presented in Fig. 2 that the extent of Wzc phosphorylation increased with time over a period of 4 h. In order to identify which amino acid was phosphorylated, 32P-labeled Wzc was subjected to acid hydrolysis, and the hydrolysate was analyzed by TLC as described in Materials and Methods. Autoradiography of the chromatogram revealed the presence of a single phosphoamino acid, phosphotyrosine (Fig. 3). This experiment was repeated with [
-32P]ATP as a phosphate donor to ensure that the presence of phosphotyrosine was due to kinase activity. In this case no phosphotyrosine or any other phosphoamino acids were detected (data not shown). The results indicate that Wzc is an autophosphorylating protein tyrosine kinase. |
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FIG. 2. Autophosphorylation of Wzc. Purified His-tagged Wzc was incubated with [ -32P]ATP as a phosphate donor as described in Materials and Methods. The reaction was stopped at 0, 15, 30, 45, 60, 90, 120, and 240 min by adding sample buffer. An autoradiograph of these samples run on an SDS-polyacrylamide gel was developed.
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FIG. 3. Phosphoamino acid analysis of Wzc. Purified His-tagged Wzc was used in a protein kinase assay with [ -32P]ATP as a phosphate donor. The protein was hydrolyzed and subsequently run on a TLC cellulose plate as described in Materials and Methods.
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FIG. 4. In vitro dephosphorylation of Wzc by Wzb. Purified His-tagged Wzc was incubated at 30°C with purified Wzb as described in Materials and Methods. The reaction was stopped at 0, 30, and 60 min and 12 h, and aliquots were analyzed by Western immunoblotting using antiphosphotyrosine antibodies (PT66). As a control Wzc was incubated without Wzb. The following lanes were incubated with Wzb for the indicated times: lane 1, 0 min; lane 2, 30 min; lane 3, 60 min; lane 4, 12 h. The following lanes were incubated without Wzb for the indicated times: lane 5, 0 min; lane 6, 30 min; lane 7, 60 min; lane 8, 12 h.
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FIG. 5. Presence of the (phosphorylated) Wzc protein in defined A. lwoffii RAG-1 mutants. Lysates of the RAG-1 mutants were immunoblotted using antiphosphotyrosine antibodies (A) and anti-Wzc (B) as described in Materials and Methods. Lane 1, wild-type RAG-1; lane 2, LN501; lane 3, LN502; lane 4, LN503; lane 5, LN504.
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Emulsifying activity and polymer production in mutants of A. lwoffii RAG-1. The Tlu morphology of deletion mutants LN501 and LN502 suggested that these mutants were defective in emulsan production. As shown in Fig. 6 these two strains along with LN503 and LN504, which make nonphosphorylating Wzc, were all defective in emulsifying activity. The emulsifying activity of these mutants was between 15% (22 U/ml) and 25% (33 U/ml) of the wild-type activity (210 U/ml).
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FIG. 6. Emulsifying activities and galactosamine content of defined mutants of A. lwoffii RAG-1 compared to the wild type. Relative emulsifying activity and relative galactosamine content were determined as described in Materials and Methods. The emulsifying activity of RAG-1 is 210 U/ml, the cell-associated galactosamine content of RAG-1 is 106 µg/OD600, and the galactosamine content in the supernatant of RAG-1 is 1,170 µg/ml. Relative emulsifying activity (white bars), relative cell-associated galactosamine content (dark-grey bars), and relative galactosamine content in the supernatant (light-grey bars). The results are the averages ± standard deviations (error bars) of at least three different experiments.
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The high galactosamine content in the broth of mutants LN503 and LN504 was also consistent with the finding that a high-molecular-mass polysaccharide was present in these mutants which was not present in any of the other strains examined (Fig. 7).
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FIG. 7. Size distribution of the polysaccharides in the supernatant of defined mutants of A. lwoffii RAG-1 compared to the wild type. Samples of the supernatant were run on an SDS-polyacrylamide gel and stained with Alcian blue as described in Materials and Methods. Lane M, broad-range protein marker. Lane 1, wild-type RAG-1; lane 2, LN501; lane 3, LN502; lane 4, LN503; lane 5, LN504.
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A tyrosine cluster at the C terminus of MPA1 family proteins has been suggested to be the site of phosphorylation (23, 41). Our results are consistent with this suggestion, since mutants lacking the five tyrosine residues were no longer phosphorylated. Recently, it was proposed that a tyrosine residue upstream of the C-terminal tyrosine cluster is involved in a cooperative two-step mechanism in which one molecule of Wzc, phosphorylated at the upstream tyrosine, is transferred to the tyrosine cluster at the C terminus of a second Wzc molecule (13). This suggestion was based on the finding that mutants lacking the tyrosine cluster still accumulated small amounts of phosphorylated Wzc. If this upstream tyrosine residue conserved in Wzc of RAG-1 (Y575) was phosphorylated, it should have been detected in the Wzc mutants lacking the C-terminal tyrosine cluster. However, this mutant showed no cross-reaction with antiphosphotyrosine antibodies. It is, however, possible that a more sensitive mode of detection such as labeling with [
-32P]ATP would have detected this phosphotyrosine. Experiments to reveal the function of the C-terminal tyrosine cluster and its relation to the upstream tyrosine residue are currently in progress.
Mutants LN503 and LN504 showed only low levels of cell-bound galactosamine yet produced abnormally high levels of a high-molecular-mass galactosamine-containing extracellular polysaccharide. It is likely that this polymer accounts for the highly viscous morphology in colonies of these mutants. Mutants of E. coli defective in phosphorylation of Wzc also showed low levels of cell bound K30 antigen (41). Mucoid colonial morphology was reported in a mutant of Streptococcus pneumoniae lacking a phosphorylation site in CpsD required for biosynthesis of the capsular polysaccharide in this strain (23). This mutant still produced parental levels of capsule. No data were presented in either of the two cases regarding extracellular polysaccharides in the cell-free broth. In contrast to findings reported here, production of high-molecular-mass exopolysaccharide succinoglycan was severely reduced in mutants of Sinorhizobium meliloti defective in phosphorylation of ExoP (26), perhaps implying a different mode of polymer synthesis, assembly, and export than in the gram-negative RAG-1.
Hypothetical model for involvement of phosphorylation in emulsan biosynthesis. Fig. 8 is a cartoon describing our prediction of how Wzb and Wzc might regulate emulsan biosynthesis. The proteins appearing in this cartoon are suggestions only. There is nothing to preclude the possibility of other proteins such as transglycosylases also being part of the complex.
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FIG. 8. Cartoon suggesting the role of Wzc phosphorylation in emulsan biosynthesis. (1) Phosphorylation of Wzc prevents polymerization and translocation of emulsan. (2) Wzb dephosphorylates Wzc. Dephosphorylated Wzc allows polymerization and translocation of emulsan. (3) Wzc autophosphorylates. Release of emulsan and the beginning of another round of emulsan polymerization and translocation. This determines the size of the polysaccharide. On the basis of sequence homology, Wzx is considered to catalyze the translocation of the membrane-bound repeat unit through the inner membrane, Wzy has been implicated in polymerization of the repeat unit on the periplasmic side of the cytoplasmic membrane, and Wza has been proposed to form an outer membrane pore through which the capsular antigen is translocated (25). , monomer of emulsan.
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In this model the nonphosphorylated state of Wzc permits the complex to initiate polymerization and transport of the biopolymer to the outside of the cell (Fig. 8). Previous studies have demonstrated that polymer synthesis accompanies polymer release (32). The subsequent phosphorylation of Wzc is thought to bring about the cessation of polymerization and transport, thereby establishing the size of extracellular emulsan (Fig. 8). The putative involvement of Wzc in regulating emulsan polymerization explains the resemblance of Wzc in E. coli with Wzz, which is the chain length regulator of Wzy dependent O-antigens (7).
The model presented here predicts a role for phosphorylation and dephosphorylation of Wzc in regulating polymerization, translocation, and release of the emulsan polymer. Two factorsthe activity of Wzb as well as the availability of ATP, the substrate for autophosphorylation of Wzcmight be expected to regulate the system in a transient fashion. In this regard, only very small quantities of emulsan are produced when the cells are grown in rich medium (11). The production of many other exopolysaccharides, such as colanic acid (12), has also been found to be reduced in rich medium. Currently little is known about other factors, either environmental or intracellular, which could affect levels of Wzc phosphorylation. Finally, the ability to manipulate both the size and therefore the viscosity of biopolymers by altering the phosphorylation-dephosphorylation system logically may offer a unique approach to the production of highly viscous useful biopolymers in the future.
This work was supported in part by a grant from the USAID CDR Project (grant 94-A14-043).
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