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Journal of Bacteriology, September 2004, p. 5826-5833, Vol. 186, No. 17
0021-9193/04/$08.00+0 DOI: 10.1128/JB.186.17.5826-5833.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Department of Soil, Water, and Environmental Science, University of Arizona, Tucson, Arizona,1 Institute for Microbiology, Martin Luther University, Halle,2 Department of Biology, Ruhr University, Bochum, Germany,4 Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma3
Received 4 February 2004/ Accepted 21 May 2004
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(cueO-lacZ) operon fusion more efficiently than copper alone. The reaction product of the 2,3-dihydroxybenzoic acid oxidation by CueO that can complex Cu(II) ions was determined by gas chromatography-mass spectroscopy and identified as 2-carboxymuconate. |
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The mechanism of protection from copper-mediated toxicity by CueO was postulated to be the oxidation of cuprous copper (12, 23). This hypothesis was recently strengthened by the demonstration that the related multicopper oxidases Fet3 and human ceruloplasmin are able to oxidize Cu(I) to Cu(II), maintaining the cuprous-cupric redox balance in aerobic organisms and preventing copper-mediated toxicity (33, 34).
CueO was responsible for the oxidation of cuprous copper and the potential Cu(II) reductant enterobactin. Enterobactin is the indigenous catecholate siderophore of E. coli secreted to sequester iron from the environment. Recently it was demonstrated that enterobactin is a substrate of CueO in vitro (16). Copper in combination with the catecholate siderophore is much more toxic than copper alone because enterobactin and other catecholates can act as a Cu(II) reductants (15, 18). We showed that CueO oxidized the siderophore enterobactin and its precursor 2,3-dihydroxybenzoic acid and thus protected E. coli cells against copper-induced killing. The product of 2,3-dihydroxybenzoic acid oxidation was able to bind copper. In addition, the global iron-dependent repressor Fur was identified as an important determinant of copper tolerance, since a fur mutant overproduced enterobactin. Reduction of Cu(II) by enterobactin facilitated Cu(I) uptake into cells. These results give insight into the complex mode of CueO-mediated protection from copper toxicity.
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TABLE 1. E. coli strains
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Red recombinase system as described previously (6).
CAS liquid assay and plates.
E. coli strains GR1 (
cueO- cat) and W3110 were grown overnight in Luria-Bertani medium with shaking at 37°C, diluted 1:500 into Tris-buffered minimal medium (19) supplemented with 0.2% glycerol and 0.3% Casamino Acids. Cultures were grown overnight, diluted 1:500 into fresh minimal medium without iron but with 0.3% deferrated Casamino Acids (25) and different concentrations of CuCl2 and grown for 16 h to an optical density at 600 nm of 1.0. The cell density was adjusted, spent medium was centrifuged at 12,000 rpm for 2 min, and cleared spent medium was stored at 4°C.
The chrome azurol S (CAS) assay solution was prepared as described by Payne (25). In short, 0.0219 g of hexadecyltrimethylammonium bromide was dissolved in 50 ml of water; 1.5 ml of 1 mM FeCl3 · 6H2O in 10 mM HCl was mixed with 7.5 ml of 2 mM CAS solution. This Fe-CAS solution and also piperazine buffer (4.307 g of piperazine dissolved in 30 ml of water with 6.75 ml of concentrated HCl to bring the pH to 6.5) was added to the hexadecyltrimethylammonium bromide solution, and the volume was brought up to 100 ml. CAS agar plates were prepared as described by Schwyn and Neilands (33); 0.5 ml of cleared spent culture medium was added to 0.5 ml of CAS assay solution and mixed, and 10 µl of shuttle solution (0.2 M 5-sulfosalicylic acid, stored in the dark) was added to facilitate transfer of iron from the CAS complex to enterobactin, and the sample was mixed. After 5 min, the absorbance at 655 nm was measured.
Enterobactin concentration determination.
The reaction between the CAS solution, Fe(III), and enterobactin proceeds as Fe(III)-CAS + enterobactin
Fe(III)-enterobactin + CAS. The decrease in absorbance at 655 nm can be used to calculate the concentration of enterobactin-bound iron with Fe(III)-CAS having a molar extinction coefficient of 105,000 M1 cm1. It is assumed that the Fe(III) and enterobactin form 1:1 complexes (14). Enterobactin concentrations were calculated from desferrioxamine units via a calibration curve.
Ferric enterobactin oxidation by CueO. Purified CueO was suspended at 1 µg/ml in 0.05 M morpholinepropanesulfonic acid (MOPS) buffer, pH 6.5, containing 0.5 mM CuCl2. Enterobactin was purified from culture supernatants of E. coli K-12 (17), complexed with iron, and chromatographically purified (33). Various concentrations of ferric enterobactin were added to reaction mixtures at 25°C, and the oxidation of ferric enterobactin was monitored by the change in absorption at 393 nm. The data were plotted and analyzed to determine Km with the enzyme kinetics algorithm of Grafit (version 4.013; Erithacus Ltd.). Visible spectra of the product were collected on a Beckman DU7 spectrophotometer.
Copper-enterobactin toxicity measurement. E. coli strains were grown overnight in LB medium with shaking at 37°C, diluted 1:400 into Tris-buffered minimal medium (19) with 0.2% glycerol and 0.3% Casamino Acids, grown overnight, and diluted 1:400 into fresh minimal medium without iron. Cultures were incubated for 16 h and centrifuged, and the spent medium was filter sterilized (20-µm pore size; Nalgene). Cells to be challenged were also subsequently grown in LB medium and regular minimal medium. Copper challenge was carried out as follows: 5 µl of stationary-phase culture was added to 1 ml of sterile spent medium containing 5 mM CuCl2, mixed, and incubated at room temperature for 15 min. The mixture was diluted 1:200 into LB medium, and 25 µl was plated onto LB agar plates.
Precipitate preparation, UV-visible spectrum, and EDX analysis. Purified CueO protein (5 µg) was added to a solution of 100 mM sodium acetate (pH 6.5), 500 µM CuCl2 and 2 mM 2,3-dihydroxybenzoic acid. The reaction was incubated at 50°C for 2 h. For UV-visible analysis, the reaction product was scanned on a Uvikon 922 (Kontron Instruments). For energy-dispersive X-ray (EDX) analysis, the colored oxidation product was harvested by centrifugation, and the resulting pellet was redissolved in water and recentrifuged to remove excess copper. The washed precipitate was subjected to analysis with an EM 912 OMEGA electron transmission microscope (Leo, Oberkochen, Germany) equipped with an EDX system (energy-dispersible X-ray analysis, LINK eXIII; Oxford Instruments, High Wycombe, United Kingdom) in the spot mode (100-nm spot size at 80 keV and 20 µA emission current). For analysis, a computer program considering the net counts and excitation probability, determined with the in-column filter, was used.
2,3-Dihydroxybenzoic acid oxidation by CueO. Purified CueO was incubated with 1 mM 2,3-dihydroxybenzoic acid in the presence of 0.5 mM CuCl2 and 100 mM Tris-HCl buffer, pH 8.0. The reaction was stopped after 1 min by rapid chilling and acidification with HCl to pH 2, and the reaction mixture was extracted twice with ethyl acetate. The combined organic phase was dried with sodium sulfate and filtered, and the solvent was removed by evaporation in a SpeedVac concentrator (Eppendorf). The sample was redissolved in 20 µl of methanol treated with 100 µl of ethereal diazomethane which was prepared from N-nitrosomethyl urea and transferred to an autosampler vial (Chromacol 05-CTV[A]116; Fisher Scientific, Schwerte, Germany). Excessive diazomethane and solvent were removed in a gentle stream of nitrogen, and the methylated compounds were taken up in 20 µl of chloroform.
An aliquot of 1 µl was applied to the gas chromatography-mass spectroscopy (GC-MS) system for mass fragment analysis of main signals. All spectra were recorded with a Finnigan Magnum ion-trap mass spectrometer connected to a Varian GC 3400 gas chromatograph (Varian, Walnut Creek, Calif.). Injections were made with a CTC A200S autoinjector. The following conditions were chosen for GC: splitless injector temperature 260°C, transfer line temperature 260°C, capillary column Zebron ZB-5 (Phenomenex, Aschaffenburg, Germany), film thickness 30 m by 0.25 mm by 0.25 µm, and helium as the carrier gas. The temperature program was constant for 1 min at 60°C and a linear increase was chosen (30°C per min) to 280°C. The mass spectrometer was operated in full scan mode (m/z 50 to 400) with chemical ionization and methanol as the reactant gas.
Miscellaneous.
Standard molecular genetic techniques were used (31). PCR was performed in the presence of Pwo or Taq DNA polymerase (Roche, Fermentas). CueO was purified as described previously (13). CueO was concentrated where applicable with Midi centrifuge filters (Nalgene). The protein concentration of purified CueO was determined at 280 nm (
CueO = 63063 M1 cm1). The ß-galactosidase activity in permeabilized cells was determined as published previously (11, 20).
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cueO::cat) nor GR417 (
entC::cat) (defective in enterobactin synthesis) was able to produce this colored compound (data not shown). The necessity for the presence of both CueO and EntC clearly indicated that colored-compound formation is strictly dependent on both the oxidase activity of CueO and the presence of enterobactin.
A similar finding was obtained with the enterobactin precursor 2,3-dihydroxybenzoic acid. 2,3-Dihydroxybenzoic acid and copper added to wild-type cultures resulted in enhanced production of a colored precipitate (Fig. 1). No colored precipitate was formed when 2,3-dihydroxybenzoic acid was added to E. coli strain GR1 (
cueO::cat) (Fig. 1).
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FIG. 1. Effect of 2,3-dihydroxybenzoic acid (DHB) on different E. coli strains. Colored precipitate formation in E. coli by CueO, CuCl2 and 2,3-dihydroxybenzoic acid in strains GR1 ( cueO::cat) and wild-type (Wt) W3110. Overnight cultures grown in Luria-Bertani medium were diluted 1:500 into minimal medium, and grown overnight, diluted 1:500 into fresh minimal medium with 500 µM CuCl2 added to all cultures, 2,3-dihydroxybenzoic acid was added where indicated, and growth at 37°C was continued for 16 h.
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cueO::cat) and wild-type W3110 was performed in the presence of different concentrations of CuCl2 under iron deprivation (Fig. 2). We clearly demonstrated that in the absence of copper and thus no expression of cueO, both wild-type strain W3110 and GR1 (
cueO::cat) produced enterobactin at very similar concentrations. In contrast, under copper stress, i.e., when cueO is expressed in the wild-type strain, strain GR1 (
cueO::cat) exhibited a significant increase in enterobactin compared to the wild-type W3110 (Fig. 2). This difference is probably due to the oxidation of enterobactin by CueO (16) in the presence of copper rather than decreased enterobactin biosynthesis in the cueO deletion strain GR1 (
cueO::cat), since enterobactin levels were very much the same in the wild-type strain and the cueO mutant when copper was not present.
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FIG. 2. Enterobactin production in E. coli strains in the presence of copper. Overnight cultures grown in Luria-Bertani medium were diluted 1:500 into minimal medium, grown overnight, and diluted 1:500 into fresh minimal medium, and after 2 h of growth at 37°C the cells were diluted 1:500 into fresh minimal medium with the indicated concentrations of CuCl2 and 50 µM FeCl3. The strains were W3110 (solid bars) and GR1 ( cueO::cat) (open bars). Cell growth was continued for 16 h at 37°C with shaking before the enterobactin content was determined as described in Materials and Methods.
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In order to validate this hypothesis, we investigated whether enterobactin oxidation by CueO reduces the toxicity of the interaction of enterobactin with copper. Therefore, E. coli strain W3110 was challenged with spent medium supplemented with copper from either a cueO deletion strain, which is rich in enterobactin, or from strain GR417 (
entC::cat), which is unable to produce enterobactin (Table 2). No cells survived with spent medium of strain GR1 (
cueO::cat) (Table 2). Conversely, spent medium of strain GR417 (
entC::cat), whichcontained no enterobactin at all, was not toxic for E. coli cells in the presence of copper. This indicated that copper alone was lethal only in combination with enterobactin under the conditions used. Moreover, addition of purified CueO protein to the survival assay with spent medium rich in enterobactin resulted in survival of challenged cells (Table 2). This again demonstrated that oxidation of enterobactin by CueO rescued E. coli cells from copper- and enterobactin-induced killing. Conversely, when CueO was heat inactivated (10 min of boiling) prior to copper challenge, E. coli cells did not survive (data not shown). Thus, protection against copper toxicity could only be accomplished when CueO oxidized enterobactin.
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TABLE 2. Enterobactin toxicity to E. coli in the presence of Cu and the protective activity of CueO
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FIG. 3. Oxidation of ferric enterobactin by purified CueO. The initial rates of ferric enterobactin (FeEnt) oxidation by CueO (1 µg/ml) were spectrophotometrically monitored at 393 nm; the data were analyzed and plotted with the enzyme kinetics algorithm of Grafit 4.013 (Erithacus Ltd., Middlesex, United Kingdom). The apparent Km of the plotted data for the enzymatic reaction was 1.5 µM.
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FIG. 4. Spectrum of CueO oxidation product. 2,3-Dihydroxybenzoic acid was oxidized by CueO, and the oxidation product was analyzed. For EDX analysis, the colored oxidation product was harvested by centrifugation, and the resulting pellet was redissolved in water and recentrifuged to remove excess copper. The washed precipitate was subjected to EDX analysis with an EM 912 Omega electron transmission microscope (Leo, Oberkochen, Germany) equipped with an EDX system (energy-dispersible X-ray analysis Link eXIII; Oxford Instruments, High Wycombe, United Kingdom) in the spot mode (100-nm spot size at 80 keV and 20 µA emission current).
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FIG. 5. Chemical ionization-MS spectrum of the 2,3-dihydroxybenzoate oxidation product catalyzed by CueO in the presence of 0.5 mM CuCl2. The m/z of 229 represents the protonized trimethylated reaction product 2-carboxymuconate, and the m/z of 197 represents a fragment after the loss of one molecule of methanol.
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(cueO-lacZ) operon fusion was also used to elucidate induction of cueO in this study. Compared to copper alone, elevated lacZ expression in E. coli
(cueO-lacZ) was observed when 2,3-dihydroxybenzoic acid or enterobactin in combination with copper was added (Fig. 6). This may be due to increased copper uptake as a result of Cu(II) reduction by enterobactin or 2,3-dihydroxybenzoic acid.
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FIG. 6. Induction of cueO in E. coli strain WOII260B (cueO-lacZ) under copper stress. Cells of E. coli strain WOII260B (cueO-lacZ) containing a cueO-lacZ operon fusion on the bacterial chromosome grown in LB medium were diluted 15-fold into fresh minimal medium and induced after 2 h of growth. Incubation was continued with shaking at 37°C for 2 h, and the ß-galactosidase activity was determined. Each experiment was performed in triplicate, and the average and standard deviation were calculated.
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(cueO-lacZ) was induced in the presence of low added copper concentrations (10 µM) by 2',2'-dipyridyl, a strong chelator of iron and copper [Martell's critical stability constants log K = 8.5 for Cu(II), log K = 16.3 for Fe(III)] (Fig. 6). There was also a slight increase in
(cueO-lacZ) induction in medium without added copper, possibly due to residual copper in the medium. This could indicate that copper bound to 2',2'-dipyridyl is able to enter the cell and might increase the cytoplasmic copper concentration. This all suggested that expression of cueO is directly dependent on copper and not indirectly on copper-generated oxidative stress. Deletion of fur leads to copper hypersensitivity. The Fur protein of E. coli is the global regulator for iron uptake systems, defense against oxidative stress, and iron storage (3). Thus, a strain deleted of fur is also derepressed for enterobactin biosynthesis. We demonstrated that deletion of the fur gene rendered E. coli hypersensitive to copper (Fig. 7). The presence of ascorbate at the initial setup of the experiment was essential for the copper-sensitive phenotype of the fur mutants, indicating that the production of the prooxidant Cu(I) is the first step in creating toxic oxygen intermediates.
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FIG. 7. Copper resistance of different E. coli strains. Growth in the presence of different CuCl2 concentrations is shown. Overnight cultures were diluted 1:400 into fresh LB broth and, after 2 h of growth, diluted into fresh LB broth with the indicated concentrations of CuCl2 and 1 mM ascorbate. Cell growth after 6 h of incubation at 37°C with shaking was monitored as the optical density at 600 nm and converted to dry weight. The E. coli strains used were W3110 ( ), GG199 ( fur::cat) ( ), and GG213 ( fur::cat entC) ( ). Experiments were performed at least in triplicate, and the average is shown.
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FIG. 8. Model of copper homeostasis in E. coli and the central role of CueO. Copper enters the bacterial cell by an unknown mechanism and exerts its toxicity by generating reactive oxygen species via copper-mediated redox cycling. Cytoplasmic detoxification of copper is accomplished by the P-type ATPase CopA, while periplasmic copper is effluxed by the CusCBA complex. The multicopper oxidase CueO probably converts Cu(I) to the less toxic Cu(II). Additionally, when copper is present, CueO oxidizes the catechol siderophore enterobactin, avoiding enterobactin-mediated reduction of Cu(II) to Cu(I). The resulting oxidation product of enterobactin, 2-carboxymuconate, sequesters copper and might constitute a copper sink after export to the outside.
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Given the relatively small increase in cueO expression in the presence of copper plus siderophore compared to that in the presence of copper alone, the effect of siderophore-mediated reduction and subsequent uptake of copper into the cytoplasm and, thus, increased copper concentration cannot be considered a major stress factor within the cytoplasm. Probably, the critical compartment for copper-siderophore toxicity is the periplasmic space, where CueO exerts its protective oxidase activity.
This situation is reminiscent of mammalian systems, in which ceruloplasmin, in addition to its ferrooxidase activity, is thought to oxidize catecholamines such as 6-hydroxydopamine and thereby prevent the formation of reactive oxygen species (9). For example, copper accelerated the autooxidation of 6-hydroxydopamine 61-fold (5). Copper neurotoxicity was also found to be dependent on dopamine-dependent copper uptake and may contribute to the death of dopaminergic neurons in Parkinson's disease. Interestingly, copper was implicated in the increased incidence of parkinsonism in subjects exposed to copper in mining operations in Chile (24). Since ceruloplasmin was also shown to have Cu(I) oxidase activity, it might have a bigger role in protection from neurodegenerative diseases than previously anticipated.
CueO might modify enterobactin so that it accumulates with sequestered copper in the periplasm and the extracellular medium. EDX analysis clearly demonstrated that the water-insoluble 2,3-dihydroxybenzoic acid oxidation product was able to bind copper. It was pointed out before that catechol-metal complexes are highly stable and that compounds containing catecholic nuclei can sequester metals from other complexes. This would also result in the prevention of redox cycling of those metals (4, 32).
In order to prevent an unfavorable constitutive oxidation of enterobactin by CueO, expression of cueO occurs only in the presence of copper. This control mechanism would ensure that the deleterious interaction between copper and enterobactin is avoided. CueO is regulated at the genetic and enzymatic levels by copper. CueO possesses a methionine-rich region that is involved in copper-dependent enzyme regulation. Recently, we showed that this region is essential for CueO-mediated siderophore oxidation (30).
E. coli strains deleted of fur were described as having a higher free iron concentration (3, 36). However, it was determined that such bacteria contain considerably less total iron, presumably by downregulating iron storage (1). Our results demonstrated that deletion of fur resulted in a severe copper-sensitive phenotype. Growth of a fur-deleted strain was almost completely inhibited at a CuCl2 concentration as low as 100 µM in the presence of ascorbate. The parental wild-type strain E. coli W3110 under the same growth conditions is only inhibited at much higher concentrations (12). About 5,000 copies of the Fur protein are usually present in an E. coli cell, but under redox stress this level is increased twofold (1). A fur mutant also produces an increased amount of enterobactin. That enterobactin with copper is toxic to cells is again supported by the ability of the
fur
entC double deletion strain, which is unable to synthesize enterobactin, to tolerate higher copper concentrations than the
fur single-deletion strain.
The fact that the interaction of copper and the natural iron chelator enterobactin is toxic indicates that CueO and enterobactin constitute a connecting link between copper and iron homeostasis in E. coli. These links between iron and copper homeostasis in E. coli provide a launching pad from which to tackle the physiological mechanisms of trace metal homeostasis in prokaryotes. It also might initiate studies of CueO-mediated protection from catecholate siderophore-enhanced copper toxicity as a model for copper damage to dopaminergic neurons.
We thank Jennifer Crispin and Raina Maier for desferric enterobactin and Thomas V. O'Halloran for strain WOII260B. Thanks are due Jim Imlay and Dietrich H. Nies for suggestions and Dieter Neumann (Leipniz-Institut für Pflanzenbiochmie, Halle, Germany) for EDX analysis. We also thank Barry Rosen and Nigel Brown for carefully reading the manuscript and for suggestions.
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fur mutants of Escherichia coli: protective role of superoxide dismutase. J. Bacteriol. 177:2305-2314.
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