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Journal of Bacteriology, March 2004, p. 1793-1801, Vol. 186, No. 6
0021-9193/04/$08.00+0 DOI: 10.1128/JB.186.6.1793-1801.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Accessory Gene Regulator Control of Staphyloccoccal Enterotoxin D Gene Expression
Ching Wen Tseng,1 Shuping Zhang, and George C. Stewart1*
Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas 66506,1
Mississippi Veterinary Diagnostic Laboratory, Jackson, Mississippi 392162
Received 19 June 2003/
Accepted 5 December 2003

ABSTRACT
The quorum-sensing system of
Staphylococcus aureus, the accessory
gene regulator (Agr) system, is responsible for increased transcription
of certain exoprotein genes and decreased transcription of certain
cell wall-associated proteins during the postexponential phase
of growth. This regulation is important for virulence, as evidenced
by a reduction in virulence associated with a loss of the Agr
system. The enterotoxin D (
sed) determinant is upregulated by
the Agr system. To define the Agr-regulated
cis element(s) within
the
sed promoter region, we utilized promoters not regulated
by Agr to create hybrid promoters. Hybrid promoters were created
by using
sed sequences combined with the enterotoxin A (
sea)
promoter or the
S. aureus lac operon promoter sequences. The
results obtained indicated that the Agr control element of the
sed promoter resides within the -35 promoter element and at
the Pribnow box to the +1 site of the promoter. At these positions
of the
sed promoter, a directly repeated 6-bp sequence was found.
This repeat is important for overall promoter activity, and
maximal regulation of the promoter activity requires both repeat
elements. Furthermore, Agr control of
sed promoter activity
was found to be dependent upon the presence of a functional
Rot protein. Therefore, the postexponential increase in
sed transcription results from the Agr-mediated reduction in Rot
activity rather than as a direct effect of the Agr system.

INTRODUCTION
Staphylococcus aureus is a significant human pathogen which
causes a wide range of diseases, including cutaneous infections,
food poisoning, endocarditis, pneumonia, osteomyelitis, and
septic arthritis (
7,
23,
40). The virulence factors of this
organism include a variety of exoproteins and cell wall-associated
proteins (
1). The exotoxins include enterotoxins (A to E and
G to R); leukotoxin; exofoliative toxins; alpha-, beta-, gamma-,
and delta-hemolytic toxins; toxic shock syndrome toxin; coagulase;
and secreted enzymes, such as nuclease and proteases (
1,
4,
19,
26). Staphylococcal enterotoxins are superantigens and are
responsible for staphylococcal gastroenteritis. The symptoms
of staphylococcal gastroenteritis include emesis and abdominal
cramping (
4,
40).
Coordinated regulation of expression of the many virulence genes is a critical feature of the pathogenicity of S. aureus, and the regulatory networks might provide sites of possible therapeutic intervention in treating staphylococcus infections. To date, several global regulators have been reported to regulate the production of virulence-associated exoproteins and cell wall components (5, 6, 9, 10, 15, 19, 24, 32). Among these regulatory systems, the accessory gene regulator (Agr) system has been the best characterized. The Agr system is a quorum-sensing system and a two-component regulatory system which responds to an autoinducer peptide (18, 37). The agr operon produces two distinct transcripts, designated RNAII and RNAIII (19, 25). RNAII encodes AgrBDCA, which is the quorum-sensing system (19, 25). AgrA is the response regulator and, when phosphorylated, upregulates the expression of the P2 and P3 promoters to increase the production of RNAII and RNAIII (3). AgrC is the transmembrane histidine kinase responsible for sensing the level of autoinducer in the environment (21). AgrD encodes a polypeptide that appears to be processed and exported by AgrB (37). AgrD accumulates extracellularly as the peptide inducer (18). RNAIII encodes delta-hemolysin, but the RNAIII itself serves as the regulatory signal of the Agr system (17, 25). As the cell density increases in a growing culture, the intracellular level of RNAIII increases due to the activity of the Agr system. The increased RNAIII level leads to increased transcription of many exotoxin genes and reductions of transcription of certain cell wall protein determinants and their associated protein genes (19, 25, 36). Inactivation of the Agr system leads to a nonhemolytic and nonproteolytic phenotype, which is due to the failure of exoprotein induction (19).
The sarA locus encodes a transcriptional factor which upregulates the expression of RNAIII, thus influencing the expression of Agr-regulated genes (9). However, it has also been shown to regulate gene expression in an Agr-independent fashion (10).
The repressor of toxin (rot) locus was first identified through a transposon mutagenesis study (24). The inactivation of rot was able to partially restore the alpha-hemolysin- and protease-positive phenotypes in an agr null mutant (24). Rot is a member of the Sar family of transcriptional factors of S. aureus. Rot is a repressor of transcription of various genes, including those encoding certain toxins, but also has positive regulatory activity for 86 determinants (32). Its activity is regulated by the Agr system. Results of Northern blot analysis have shown that the transcription of Rot is not affected by the Agr system but that Rot activity is negatively regulated by the Agr system (24). The exact mechanism of Rot regulation by the Agr system is not known. An examination of Rot regulatory effects by microarray analysis has shown that Rot acts as a global regulator that affects several virulence factors, including geh, ssp protease, alpha-toxin, protein A, and clumping factor (32).
A number of staphylococcal enterotoxins that are distinguished by serological or amino acid sequence differences have been identified. They are designated staphylococcal enterotoxin A (SEA) through SER, excluding SEF, which was previously the designation of toxic shock syndrome toxin (4, 22, 26, 27, 29, 35, 40). The enterotoxin genes are carried on accessory genetic elements in S. aureus. The expression patterns for the different serotype enterotoxins have been found to vary. For, example, SEA is produced primarily during exponential growth, whereas SEB, SEC, and SED appear in culture media in the largest quantities during the transition from exponential growth to stationary-phase growth, a characteristic of their regulation by the Agr system (2, 8, 11, 22, 29, 35, 38). Loss of the Agr signal transduction system results in substantial reductions in enterotoxin protein and mRNA production. The reductions in mRNA levels were fourfold for SEB and two- to threefold for SEC (22, 29). The reduction in enterotoxin protein production was more dramatic. For example, SEC was reduced 16- to 32-fold and SED was reduced 5-fold, as evidenced by Western blot analysis (2, 29).
The sed determinant is encoded along with sej and ser on a large penicillinase plasmid in S. aureus, and its promoter has been characterized by Zhang and Stewart and others (2, 26, 39). A 59-bp promoter-containing fragment was fused to a reporter gene, cat, and was found to retain the promoter strength and Agr stimulatory effect seen with the entire intergenic sequence between sed and sej (39). In further analysis of the sed promoter, two 6-bp direct repeats were found to be contained within this minimum promoter fragment. In this report, we describe the role of these repeat sequences in the regulation of this promoter by the Agr system. Hybrid promoters were constructed by using the non-Agr-regulated sea and lactose operon promoters. The promoter elements were evaluated for regulation by Agr and Rot.

MATERIALS AND METHODS
Media and culture conditions.
Escherichia coli cultures were grown in L broth (1% NaCl, 1%
tryptone, 0.5% yeast extract) with shaking at 200 rpm or on
L agar (L broth with 1.5% agar) at 37°C overnight.
S. aureus cultures were grown in tryptic soy broth (TSB; Difco) with shaking
at 200 rpm or on tryptic soy agar (Difco) at 37°C overnight.
The bacterial strains used are listed in Table
1. All
S. aureus strains are 8325-4 derivatives. Antibiotic concentrations utilized
were ampicillin, 100 µg/ml; erythromycin, 400 µg/ml
for
E. coli and 20 µg/ml for
S. aureus; kanamycin, 25
µg/ml; and tetracycline, 20 µg/ml for
E. coli and
5 µg/ml for
S. aureus. Skim milk plates were prepared
according to the Difco formulation.
DNA manipulations and plasmids.
Promoter elements and the Rot expression fragment were cloned
by PCR. Site-directed mutagenesis was carried out with oligonucleotide
primers containing the desired mutations as described previously
(
39). PCR primer pairs are listed in Table
2. The plasmids used
are listed in Table
3. PCR-amplified promoter elements were
inserted into pMH109 (
16) following
SacI and
XbaI digestion.
Subsequently, the inserted DNA fragments were subjected to DNA
sequencing to confirm the identity of the inserted sequence.
The promoter cloning plasmid, pMH109, has a copy number of 10
in
S. aureus (
16), which is comparable to the copy numbers reported
for the large penicillinase-type plasmids similar to the
sed-bearing
pIB485 (
31). The Rot expression plasmid pDT34 utilizes a constitutive
mutant version of the
S. aureus lac operon promoter (
28) to
express Rot in an
agr- and
rot-independent fashion. This shuttle
plasmid utilizes the pE194 (
14) replicon and
ermC for selection
in
S. aureus and the pCR2.1 (Invitrogen) backbone for replication
and selection in
E. coli. The plasmid was constructed by subcloning
the
S. aureus lac promoter element from pZS2747 into pUC19 by
XbaI and
SacI digestion. The resultant plasmid, pUC
lac, was
digested with
PstI and
AflIII and ligated with the 2.3-kb
PstI-
and
AflIII-digested fragment from pE194 to produce pDT42. A
1.8-kb
SacI fragment from pDT42, bearing the pE194 replicon
and
ermC plus the
S. aureus lac promoter fragment, was inserted
into the
SacI site of pCR2.1 to create pDT33. Plasmids were
electroporated into RN4220 by the method of Schenk and Laddaga
(
33). To verify the inserted elements, plasmid DNA was isolated
from RN4220 and transformed into
E. coli strain DH5

. Plasmid
DNA was isolated with Wizard Plus Minipreps (Promega) and subjected
to DNA sequence analysis. The confirmed plasmids were then transduced
from RN4220 into strains with different genetic backgrounds
by the method of Rubin and Rosenblum (
30).
CAT assay.
Chloramphenicol acetyltransferase (CAT) assays were performed
by the spectrophotometric method of Shaw (
34). Bacterial cultures
were grown in TSB with appropriate antibiotic selection overnight
at 37°C. Ten milliliters of prewarmed TSB (37°C) was
inoculated with an overnight culture to an
A540 of 0.2. The
cultures were then incubated at 37°C with shaking until
the
A540 was 2.5. The CAT activity at this postexponential phase
of growth was substantially higher than that obtained with stationary-phase
cultures (
39), although the relative values (ratios of wild-type
to mutant promoters or of activities in different mutant host
backgrounds) were identical at the two growth phases. The growth
kinetics of the different mutant strains did not differ significantly
from that of the wild-type
S. aureus strain. Five milliliters
of each bacterial culture was collected, the cells were harvested
by centrifugation (5,000
x g, 10 min), and the cell pellets
were washed with Tris-EDTA buffer (50 mM Tris-HCl, 10 mM EDTA
[pH 8.0]). The cell pellets were resuspended in 1 ml of Tris-EDTA
buffer, and the cells were then lysed with 0.1-mm-diameter glass
beads twice for 1 min at 4°C with an eight-sample bead beater
(Biospec Products). Between cycles, the suspensions were cooled
on ice for 1 min. The lysed bacterial samples were centrifuged
(2,500
x g, 10 min) at 4°C, and the supernatant was saved
and stored at -70°C. Two to twenty-five microliters of cell
lysate was added to 37.5 µl of 0.4% 5,5'-dithiobis-2-nitrobenzoic
acid (DTNB; Sigma) in 100 mM Tris-HCl (pH 8.0) and 7.5 µl
of 5 mM acetyl coenzyme A (Amersham Pharamcia). Distilled water
was added to give a final volume of 250 µl. The reaction
mixtures were then incubated at 37°C for 10 min prior to
the addition of 5 pmol of chloramphenicol (in 10 µl of
50% ethanol). The changes in absorbance at 412 nm were measured
with a microplate reader (Molecular Devices), and the CAT values
were calculated as the change in absorbance per minute divided
by 13.6 (the molar extinction value for DTNB) and by the cell
dry weight. CAT values were expressed as nanomoles of chloramphenicol
acetylated per milligram (dry weight) of cells per minute.
Statistical analysis.
Each result was represented as the mean ± the standard deviation for at least three samples, and the three-sample experiment was repeated. Results were subjected to a pair-sampled two-tailed Student t test. Differences with P values less than 0.05 were considered to be significant.

RESULTS
Mutation analysis of the sed promoter.
Like many other staphylococcal exoprotein virulence genes, most
enterotoxin genes are positively regulated by the
agr system.
The mechanism by which the
agr system increases the transcription
of exoprotein genes is unknown. The minimal Agr-regulated
sed promoter, which retains the promoter strength and regulation
of extended sequences (
39), is presented in Fig.
1. To define
the regulation of the
sed promoter, we created various mutant
sed promoters by keying initially on the GC pairs in the promoter
sequence. The activities of these promoters were analyzed by
measuring the
cat expression levels in both wild-type and
agr mutant strains. Our results showed that base substitutions in
the spacer sequence between the -35 element and the Pribnow
box and in sequences distal to the transcription start point
had little effect on
agr regulation (Table
4). Because sequences
within this minimal promoter fragment are important for the
activity of the promoter (
39), base substitutions often had
pronounced negative effects on promoter activity, which made
it impossible to evaluate any
agr-associated effects.
Agr regulation of the sed promoter.
To circumvent the effects of base-pair changes on promoter strength,
a hybrid promoter approach was undertaken. Fusion of the
sed promoter with non-
agr-regulated staphylococcal gene promoters
sea (
8,
35) and
lac created a series of hybrid promoters. The
resulting promoter-containing plasmids were introduced into
S. aureus agr mutant and
agr+ hosts. The promoter activity for
each hybrid was analyzed by measuring the level of
cat expression
activity in each host's genetic background (Table
5). Replacement
of
sed sequences upstream of the Pribnow box with the corresponding
sequences from the staphylococcal
lac operon promoter (pZS2739)
generated a promoter that was stronger than the
sed wild-type
promoter (pZS2704) and that was not affected by the Agr system.
Replacement of the Pribnow box and distal sequences with
lac sequences (pZS2740) produced a largely inactive promoter, consistent
with the requirement for sequences downstream of the start site
of transcription for the expression of the
sed promoter (
39).
Although it was a poor promoter, it retained the Agr host expression
effect. Substitution of the downstream sequences with those
from the Agr-independent
sea promoter (pZS2888) resulted in
an active promoter which did not display differential expression
in the two Agr-type hosts. These results suggest that the upstream
sed sequences may make a weak contribution to the Agr effect,
and because the effect is weak, it is only observable with poor
promoters. Substitution of the spacer sequences separating the
-35 and Pribnow box elements with the
lac operon promoter spacer
sequence had no effect on Agr regulation of the
sed promoter.
This result indicates that the Agr system
cis element in the
sed promoter must lie within the -35 element and/or within the
sequences distal to the spacer sequence.
Hybrid promoters were created with the Agr-independent enterotoxin
A gene promoter. We found that the
sed +1-distal sequences could
be replaced by the corresponding bases from the
sea gene with
retention of promoter activity. Substitution of the sequences
upstream of the
sed Pribnow box by
sea sequences (pZS2887) or
substitution of sequences distal to the promoter spacer sequence
with
sea sequences (pZS2888) produced promoters with no statistically
significant Agr influence on promoter activity. This finding
suggests that both the upstream and the downstream sequences
are important in Agr control of this promoter's expression.
Hybrid promoters with the
sea -35 element were usually stronger
promoters than those with the
sed -35 sequences, consistent
with the conclusion that this element is weak in the
sed promoter
(
39).
The hybrid promoter in pZS2889 contains the lac sequence in the promoter spacer region and sea sequences distal to the start site of transcription but retains the sed -35 and Pribnow box sequences. This promoter exhibits statistically significant Agr stimulation of transcription. This result rules out contributions of the promoter spacer and transcription start site-distal sequences in the Agr control of the sed promoter. Thus, we concluded that the Agr cis-regulatory region of the sed promoter is located in both the -37 to -34 and the -12 to -1 regions.
Role of the directly repeated sequence in Agr control of the sed promoter.
Included in the sed promoter sequence is a directly repeated 6-bp sequence (ATGAAA; -37 to -32 and -9 to -5 [Fig. 1]). This repeated sequence comprises the -35 element of the promoter, and the downstream repeat overlaps the Pribnow box from -9 to -5. These repeat elements are located within the region required for Agr regulation. The sea promoter was selected as a backbone for the incorporation of the sed repeat sequences to determine their effect on Agr responsiveness.
A series of promoters containing one or both repeat elements and a set with an extended downstream element to cover the entire Pribnow box were constructed. The sequences of the promoter elements and their CAT values are given in Table 6. The sea promoter is not under the control of the Agr system, in agreement with the findings of Tremaine et al. (35). Incorporation of the sed upstream repeat resulted in a hybrid promoter which displayed a significant level of Agr enhancement of transcription (pZS2964). Incorporation of the downstream element (pZS2963) or both 6-bp elements (pZS2965) did not result in significant Agr regulatory effects. When the sed downstream sequence was extended by 3 bp to include the entire sed Pribnow box, an Agr effect was detected when the upstream element was present (pDT26) but not when the upstream element was absent (pDT27). The high Agr stimulation index value observed with pDT26 is due in part to the low promoter activity detected with this construct.
The converse set of promoter constructs were made to determine
whether loss of the repeat sequences is associated with loss
of Agr regulation of the
sed promoter. In this case, replacement
of the upstream element (pDT28) or both elements (pDT29) resulted
in loss of most of the Agr effect on transcription, although
the small residual differences were still found to be statistically
significant. In keeping with the results obtained with the
sea-based
promoters, replacement of only the downstream element (pDT30)
did not result in a loss of the Agr effect.
Full acquisition of Agr enhancement of transcription by the sea promoter required both the upstream and the extended downstream elements. Substantial loss of Agr regulation of the sed promoter occurred when the upstream element or a combination of upstream and downstream elements were replaced with sea sequences.
Rot regulation of sed promoter element.
Rot has recently been identified as a global regulator (32). To determine whether rot has a regulatory role in enterotoxin D gene expression, an agr rot mutant strain was constructed by transduction of the inactivated rot allele (provided by P. J. McNamara) into the agr deletion strain. The agr rot mutant genotype was confirmed by its protease- and urease-positive phenotypes and by genotyping by PCR (data not shown). To test whether Rot has a regulatory effect on sed expression, the activity of the minimum sed promoter element was examined in rot mutant and agr rot mutant genetic backgrounds. The sea, lac, and rot promoter elements fused with cat were also transduced into the rot mutant and agr rot mutant genotypic backgrounds for comparisons. The results of these comparisons are listed in Tables 7 and 8. The staphylococcal lac promoter element is not affected by Rot. Rot appears to inhibit the transcription of both the sea and the sed promoters. The effect on the activity of the sea promoter was surprising, because expression of this enterotoxin gene was thought to be unregulated.
The most important finding from this study is that the
sed promoter
does not exhibit any
agr regulatory effect in the
rot mutant
background. This finding indicates that the reported Agr regulation
of the
sed promoter is an indirect action mediated through the
Agr regulation of Rot activity. In agreement with the results
of Saïd-Salim et al. (
32),
rot promoter activity is not
transcriptionally regulated by Agr, (compare CAT values from
the
agr+ and
agr mutant host strains with pDT41). The hybrid
sed promoter bearing the
lac spacer sequence (
sed-
lac-
sed; pZS2859)
was also transduced into
rot mutant backgrounds, and the promoter
activities obtained were 143.8 ± 2.0, 85.8 ± 12.5,
160.5 ± 16.0, and 153.2 ± 6.7 nmol/mg (dry weight)
of cells/min for the wild-type,
agr mutant,
rot mutant, and
agr rot mutant strains, respectively, and these values are also
in agreement with the results for the
sed wild-type promoter.
The TG dinucleotide at position -14/-13 that was shown to be
required for expression from the
sed promoter with its weak
-35 element (
39) is retained in the
sed-lac-sed hybrid promoter
as a contribution from the
lac spacer sequence, although the
position is shifted to -16/-15 (Table
5).
Effect of Rot expression on promoter activities.
To examine whether Agr regulates Rot activity in a transcriptionally independent manner and to confirm that the sea, sed, and rot promoter elements are truly regulated by Rot, we tested whether the expression of rot from an Agr-independent promoter would influence the activity of the target promoters.
PCR was used to amplify the rot open reading frame, including its ribosome binding site, and this fragment was inserted into pCR2.1 (pDT32). To establish an unregulated constitutive and compatible expression system for rot with pMH109, the staphylococcal lac promoter (lacking its operator sequences) was employed and pE194 was used as the expression plasmid backbone. The rot expression plasmid (pDT34) and its negative control plasmid lacking the rot encoding sequence (pDT33) were transduced into the wild-type and agr rot mutant genotypic background strains. The strains were tested for protease and urease activities to confirm their Rot-negative phenotypes. The presence of the rot expression plasmid caused no phenotypic change in a wild-type background. In an agr rot mutant genetic background, the plasmid only partially rescued the urease phenotype (data not shown); however, it completely suppressed protease production (Fig. 2). This finding provides evidence that the Rot protein is produced in cells bearing pDT34. The sea, sed, and rot promoter-containing plasmids were then transduced into the rot expression plasmid-bearing strain and its negative control strains. The CAT values and fold differences are listed in Tables 9 and 10. The presence of the Rot expression plasmid reduced the activities of the sea and sed promoters relative to those in cells bearing the control vector. However, the activity of the rot promoter increased in the presence of pDT34, suggesting a positive transcriptional effect. No pDT34-associated changes were observed with the lac promoter. The experiments were repeated with a rot-negative host, in which all of the Rot protein would result from expression from pDT34. Again, the enterotoxin promoters showed reduced promoter activity and the rot promoter exhibited increased activity in the presence of pDT34. The repression of the sed promoter did not equal the twofold effect seen in wild-type cells. The effect of the pDT34-encoded Rot on the enterotoxin and rot promoters was not equivalent to the effect of the native copy of rot (see last row of Table 10), supporting the concept that the plasmid copy did not precisely mimic the wild-type condition. In agreement with this idea, the presence of pDT34 was insufficient to produce a Rot-positive (urease-negative) phenotype, so complementation by pDT34 is incomplete. Strains bearing the plasmids pDT33 and pDT34 were cultured in the presence of erythromycin to select for the presence of the plasmid. Given the potential effect of antibiotics on exoprotein gene transcription (13), the data obtained with pDT34 should be compared only to values for the control bearing pDT33, and these values should not be compared with values obtained from plasmid-free strains.
Effect of
B and SarA on sed promoter activity.
The stress response sigma factor (
B) is thought to be a regulator
of virulence gene expression in
S. aureus (
5,
15). Derivatives
of strain 8325-4 carry a small deletion in
rsbU and do not,
therefore, produce a functional
B (
12,
15). The effect of a
functional
B on the activity of the
sed promoter was investigated
by using an isogenic 8325-4 strain with the
rsbU deletion repaired
(GP269 [
12], SigB
+ in Tables
7 and
8). The
sed promoter activity
was reduced to 60% of the level obtained with the isogenic
rsbU-negative
strain parent strain. There was a corresponding reduction in
rot promoter activity in the
B-positive strain, and therefore
the reduction in
sed promoter activity likely results from a
Rot-independent mechanism. The effect of SarA on
sed promoter
activity was also examined (Tables
7 and
8). Strains lacking
the SarA protein exhibited only two-thirds of the promoter activity
of the isogenic SarA-producing strain. In the
agr deletion strain,
the loss of the SarA protein resulted in a 25% reduction in
sed promoter activity. Part of the effect of SarA on
sed transcription
appears to be through an
agr-independent mechanism. Interestingly,
although inactivation of
sarA or
agr individually did not significantly
affect the activity of the
rot promoter, the loss of both the
agr operon and
sarA resulted in a twofold reduction in
rot promoter
activity.

DISCUSSION
The Agr system results in the postexponential phase activation
of transcription of a variety of exoproteins and also reduces
the expression of a number of cell wall-associated proteins.
The kinetics of transcriptional activation and repression have
been reported to differ, suggesting that different mechanisms
may be involved in the two activities (
36). Activation of the
Agr system results in the elevated intracellular accumulation
of RNAIII. The mechanisms of transcription activation and attenuation
following RNAIII accumulation remain unknown. We have examined
the promoter sequence of the Agr-regulated enterotoxin D determinant
of
S. aureus. A small DNA fragment extending from the -35 promoter
element to +17 has been shown to retain all of the expression
and Agr regulation properties (
39). In searching for the Agr
cis element of this promoter, we found that the spacer sequence
between the -35 and Pribnow box elements of the promoter was
not involved in Agr regulation. Furthermore, sequences distal
to the +1 site were also not involved. Only the -35 element
and the Pribnow box region remained as candidates. Included
in these sequences was a directly repeated 6-bp sequence (ATGAAA).
The creation of hybrid promoters by use of the
sed promoter
and the Agr-unregulated
sea promoter allowed the evaluation
of the contribution of these repeats in the Agr regulation of
this enterotoxin gene.
Although the results of this study suggest that these repeats are important for the Agr system's effects on sed transcription, clear-cut results were not obtained. The reason for this lack of clear-cut results lies in the nature of the Agr system itself. The Agr-regulated exotoxin genes are all expressed from poorly to moderately expressed promoter elements. The Agr system may be a means of upregulating poorly transcribed virulence factors. Therefore, the effects mediated by Agr may be masked as promoter activity is increased. A problem with the enterotoxin D promoter fragment is that base changes or substitutions associated with the hybrid promoters often have dramatic effects on promoter strength. In those cases in which promoter activity was reduced, we usually obtained a larger Agr stimulatory index value. The repeat sequence does not also appear to be a common feature of Rot-regulated genes based on examination of promoter-region sequences of Rot-regulated genes.
Rot was identified by a transposon insertion which activated protease and alpha-toxin activity in an agr null mutant (24). Because of Rot's effects on these Agr-regulated exotoxins, we evaluated its activity on enterotoxin D expression. We found that all of the reported Agr effect on enterotoxin D gene transcription can be explained by the control of Rot activity by the Agr system. There is no postexponential stimulation of sed transcription in rot-negative strains of S. aureus. Transcription of the rot determinant has been shown to be independent of the Agr system; however, the activated Agr system downregulates the activity of Rot by an undefined mechanism (24, 32). One possibility is that Rot is an RNAIII-binding protein and that the activation of Agr and its associated intracellular accumulation of RNAIII may titrate Rot away from its gene targets, as originally proposed by McNamara et al. (24).
In the course of these studies, we also found suggestive evidence that Rot has a modest, but reproducible, effect on sea expression, a determinant which has been shown not to be influenced by Agr.

ACKNOWLEDGMENTS
We thank Peter McNamara for providing the PM466 and PM783 strains,
Markus Bischoff for providing strain GP269, and Mark Smeltzer
for providing strain UAMS-979. We thank David George for technical
assistance with the DNA sequencer.
This work was supported by Public Health Services grant AI45778 from the National Institutes of Health.

FOOTNOTES
* Corresponding author. Mailing address: Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, 1800 Denison Ave., Manhattan, KS 66506. Phone: (785) 532-4417. Fax: (785) 532-4039. E-mail:
stewart{at}vet.ksu.edu.

Contribution 03-409-J from the Kansas Agricultural Experiment Station. 

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Journal of Bacteriology, March 2004, p. 1793-1801, Vol. 186, No. 6
0021-9193/04/$08.00+0 DOI: 10.1128/JB.186.6.1793-1801.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
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