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Journal of Bacteriology, April 2004, p. 2303-2308, Vol. 186, No. 8
0021-9193/04/$08.00+0 DOI: 10.1128/JB.186.8.2303-2308.2004
Copyright © 2004, American Society for Microbiology. All Rights Reserved.
Department of Microbiology, University of Texas Southwestern Medical Center, Dallas, Texas 75390
Received 9 October 2003/ Accepted 31 December 2003
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Whereas analogous receptors of ABC transport systems tend to be heterologous at the primary sequence level, they often possess similarities with respect to the manner in which their binding clefts are configured (6, 33, 40). In this regard, of the 19 amino acids that form the carbohydrate binding pocket of E. coli MglB (34), Tp38 has identity with 11, including Trp-145, which likely corresponds to the essential Trp-183 in E. coli MglB (3). Topologically, Tp38 is believed to be tethered via its lipid moieties to the outer leaflet of the cytoplasmic membrane in T. pallidum, giving rise to a periplasmic location consistent with it serving as a receptor (E. coli MglB is also periplasmic). By analogy with E. coli MglB, it is thus plausible that Tp38 functions as a carbohydrate receptor in T. pallidum, most likely for glucose. Notably, glucose is believed to be the principal, if not sole, carbon and energy source for T. pallidum (1, 2, 28, 30, 36). If so, Tp38 (and/or TpMglB-1, perhaps) may play a central role in T. pallidum virulence by comprising the uptake pathway(s) for the organism's requisite energy source. However, all predictions to date regarding the putative function of Tp38 or TpMglB-1 in T. pallidum have been based solely on theory. In the present study, we provide the first direct evidence that a recombinant version of Tp38 binds glucose in a manner consistent with the native molecule serving as a receptor for glucose transport in T. pallidum.
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The expression of Tp38 from pTp38 resulted in the production of insoluble protein in E. coli. To obtain soluble Tp38, we used a strategy whereby Tp38 was coexpressed in the presence of high amounts of the E. coli chaperonins GroES and GroEL. Plasmid pGroESL, which carries the genes encoding GroES and GroEL under the transcriptional control of the lac promoter (13), was kindly provided by Philip J. Thomas (Department of Physiology, UT Southwestern Medical Center). This plasmid was electroporated into the XL1-Blue strain of E. coli containing the pTp38 construct. Double transformants were selected on LB agar plates containing 100 µg of ampicillin per ml and 100 µg of chloramphenicol per ml. Test expression of these coresident plasmids was performed by incubating cultures at 30°C for 5 h after the addition of 0.6 mM IPTG (isopropyl-ß-D-thiogalactopyranoside) and then subjecting induced E. coli cells to sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (Fig. 1).
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FIG. 1. Expression of Tp38 in E. coli and purification of recombinant protein. Cell lysates were prepared from E. coli harboring pTp38 and pGroESL (encoding GroEL and GroES) either prior to (lane 1) or after (lane 2) induction with IPTG. Recombinant Tp38 was then purified from induced cultures by Ni-affinity column chromatography followed by gel filtration chromatography via FPLC (lane 3). Proteins were subjected to SDS-PAGE (12.5% resolving gel) and visualized by Coomassie blue staining. The positions of GroEL and Tp38 are noted, whereas low-molecular-weight GroES migrated out of this gel. Molecular mass markers (in kilodaltons) are indicated at the left.
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Culture conditions, protein purification, and mass spectrometry. An overnight culture of E. coli containing the coresident plasmids was diluted 1:50 in 1 liter of LB broth containing ampicillin and chloramphenicol (100 µg/ml [each]). The culture was incubated at 37°C on a rotary shaker at 250 rpm. When the culture reached the mid-logarithmic phase of growth (optical density at 600 nm of about 0.6), the culture was shifted to 30°C, IPTG was added to a final concentration of 0.6 mM, and the culture was incubated with shaking for an additional 5 h.
Unless otherwise stated, all protein purification steps were performed at 4°C. Cells were first harvested by centrifugation at 4,000 x g for 15 min and were suspended in 50 ml of 50 mM Tris-HCl buffer (pH 8.5) containing 500 U of DNase I and 20 mg of lysozyme (Sigma). After 1 h on ice, cells were further disrupted by sonication (Branson sonifier; Branson Ultrasonic Corp.) (output control = 7, duty cycle = 50%, and total time = 3 min), and the lysate was cleared by centrifugation at 15,000 x g for 20 min.
Soluble protein was purified from the lysate by standard Ni affinity column chromatography (Qiagen). The eluate was buffer exchanged by using a PD-10 column (Amersham Biosciences) and 50 mM sodium phosphate buffer (pH 7.4) plus 20 mM NaCl. The protein was further concentrated by using a centrifuge membrane filter device with a molecular exclusion of 30,000 Da (Millipore). The concentrate was then loaded onto a Superdex S-200 column that was preequilibrated with 50 mM sodium phosphate buffer (pH 7.4) plus 20 mM NaCl, using an Äkta fast-performance liquid chromatography (FPLC) system (Amersham Biosciences). Subsequent to elution of the protein from the column in the same buffer, the protein-containing fractions were analyzed by SDS-PAGE. At this stage, the protein was pure to apparent homogeneity (i.e., >95%). Fractions containing purified Tp38 were pooled and stored at 4°C for no more than 2 weeks prior to being used for biochemical studies. The molecular weight of the purified protein was estimated by size exclusion chromatography, using a calibration curve made with known protein standards (Bio-Rad). Mutant versions of Tp38 were purified in the same manner as wild-type Tp38.
Protein concentrations were determined from molar extinction coefficients at 280 nm (12); these values were 49,500 M-1 cm-1 (Tp38) and 38,120 M-1 cm-1 (W145F and W37F). The masses of recombinant or mutant Tp38 proteins were determined by electrospray ionization mass spectrometry (ESI-MS) (9).
Recombinant TroA was purified from E. coli as previously described (8). Recombinant Tp47 was isolated according to previously published methods (9).
Preparation of ligand-free Tp38. For release of any ligand that was potentially bound to recombinant Tp38 purified from E. coli, the protein was mildly denatured in 3 M guanidine-HCl (pH 7.4). Tp38 was then exhaustively dialyzed against 50 mM sodium phosphate buffer (pH 7.4) plus 20 mM NaCl (26). After dialysis and renaturation, residual insoluble protein was removed from the soluble refolded protein by centrifugation at 10,000 x g for 20 min. The resultant soluble protein was considered to be ligand-free Tp38. Note that the Kd for D-glucose binding to ligand-free Tp38 was 10-fold lower than that for binding to untreated Tp38 (not shown), suggesting that Tp38 purified from E. coli contained some endogenously bound ligand. Proper folding of the renatured protein was verified by circular dichroism (CD) (see below). Unless otherwise noted, all experiments were carried out by using this renatured protein.
CD measurements.
All CD spectra were collected on an Aviv 62DS spectropolarimeter (Aviv Inc.), using a 1-mm path-length quartz cuvette and averaging three repetitive scans between 260 and 190 nm. Typically, measurements were performed at 25°C for 1 µM protein in 10 mM sodium phosphate buffer plus 20 mM NaCl (pH 7.4). The mean residue ellipticity (
) was calculated from the following equation: [
] =
x M/10 x d x c, in which 107.7 was used for M (the mean amino acid residue weight), d was the cell path (in centimeters), and c was the concentration of the protein in milligrams per milliliter.
Intrinsic fluorescence spectroscopy.
Intrinsic fluorescence measurements, based on tryptophan microenvironments within proteins, were performed with Tp38 or mutant proteins in an LS50B spectrofluorometer (Perkin-Elmer). The tryptophan residues in Tp38 were excited at 295 nm (to avoid excitation of tyrosine or phenylalanine residues), and the emission spectra and fluorescence intensities, which were measured in relative fluorescence units, were obtained prior to and after the addition of ligands. Spectra were recorded by using the following parameters: excitation wavelength, 295 nm (slit width of 5 nm); scanning speed, 100 nm/min; emission slit width, 2.5 nm; and recording (emission) range, 310 to 400 nm. All measurements (averaging three repetitive scans) were typically performed at 25°C in a 1.0-ml volume quartz cuvette containing 1 µM protein, 10 mM sodium phosphate buffer (pH 7.4), and 20 mM NaCl. The effect of the ligands on the intrinsic fluorescence of Tp38 was measured by adding ligands at various concentrations. Care was taken to ensure that the volume of ligand added was not more than 1% of the total volume. The relative fluorescence change of Tp38,
F at 347.5 nm, upon ligand binding was defined as
F = F0 - FL, where F0 is the initial fluorescence of the sample and FL is the fluorescence of the sample at a given concentration of ligand. The resultant fluorescence changes (
F at 347.5 nm) were subsequently subjected to kinetic analyses according to the equilibrium equation described below.
Analysis of kinetic data.
Additions of either D-glucose or D-galactose specifically decreased the intensity of the fluorescence emission spectra when purified Tp38 was excited at 295 nm. For nonlinear regression analysis, the dependence of the change in fluorescence intensity (
F) at a ligand concentration ([L]) was fitted to the following equation (equation 1):
F =
Fmax x [L]/([L] + Kd), where [L] is the ligand (sugar) concentration,
Fmax is the maximal change in fluorescence intensity for a saturating [L], and Kd is the dissociation constant of the protein-ligand complex (derived from the concentration of ligand at which
F =
Fmax/2). Fits of data to the equation were performed with Prism 3.03 software (GraphPad Software). Whereas data are shown for representative experiments, all experiments were performed at least three times, using independently purified batches of protein.
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Inasmuch as the receptors of ABC transporters tend to bind their cognate ligands with high affinities, it was possible that recombinant Tp38 from E. coli might have contained endogenously bound ligand. The presence of such endogenously bound ligand is not unusual for ligand-binding proteins (21, 26, 27) and can give rise to aberrant behaviors in in vitro binding studies (26). Thus, to obtain Tp38 devoid of endogenous ligand, we first partially denatured Tp38 (verified by CD and fluorescence spectroscopy; not shown), followed by renaturation by dialysis. The conformational homogeneity of refolded, ligand-free Tp38 was initially assessed by size exclusion chromatography; like untreated Tp38, the refolded protein resolved as a single elution peak (consistent with conformational homogeneity) (not shown) that had a slightly lower molecular mass than the ovalbumin standard (44,000 Da). This observed mass and the mass determined by ESI-MS (42,205 Da) were both near the theoretical mass of Tp38 (42,208 Da), indicating that Tp38 behaved as a monomer in solution.
CD analyses.
CD was used to define the structural features of Tp38 in either its untreated or ligand-free form. The far UV CD spectra of untreated and ligand-free Tp38 were very similar, indicating that the proteins were correctly folded and that the partial denaturation process was reversible (Fig. 2). The two minima of the spectra, at about 205 and 216 nm, are typical of a fold with a majority of
-helical secondary structure. These observed
-helical determinations were also in agreement with PredictProtein secondary structure predictions indicating a 35% helical content for Tp38 (http://cubic.bioc.columbia.edu/predictprotein/).
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FIG. 2. CD spectra of various Tp38 preparations. Samples (1 µM) were scanned from 260 to 190 nm. Mean residue ellipticities are shown as a function of the wavelength. Inverted triangles, untreated Tp38; solid circles, ligand-free Tp38; open circles, W145F mutant Tp38.
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The intrinsic fluorescence emission of Tp38 exposed to L-glucose or L-galactose (negative controls) was changed only about 5% (Fig. 3). Changes in the intrinsic fluorescence of recombinant TroA, a periplasmic ABC metal-binding protein of T. pallidum (8, 19), or Tp47, a T. pallidum periplasmic penicillin-binding protein (9, 46), in the presence of D-glucose were below 2% (not shown). In comparison with all of these baseline (negative control) values, the intrinsic fluorescence of Tp38 changed markedly only in the presence of D-glucose or D-galactose (Fig. 3), denoting a specificity for one or both of these hexoses among the sugars tested. However, the relative reduction in fluorescence was significantly higher for D-glucose (37.6%) than for D-galactose (14.2%), suggesting that D-glucose is the preferred ligand for Tp38.
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FIG. 3. Percent change in intrinsic fluorescence of ligand-free Tp38 exposed to various sugars. Experiments were performed using 1 µM protein either in the absence or presence of each sugar (1 µM). Changes in intrinsic fluorescence in the range of 5% (dotted line) were considered negligible. D-Glu, D-glucose; D-Gal, D-galactose; D-Man, D-mannose; D-Fuc, D-fucose; D-Rib, D-ribose; L-Glu, L-glucose; L-Gal, L-galactose.
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FIG. 4. Changes in intrinsic fluorescence emission spectra of Tp38 exposed to various concentrations of D-glucose or D-galactose. Ligand-free Tp38 was incubated with 0.00, 0.01, 0.05, 0.1, 0.2, 0.3, 0.5, 1.0, 2.0, 2.5, or 3.0 µM (top line to bottom line, respectively) D-glucose (A) or D-galactose (B). Emission spectra were recorded from 310 to 400 nm. RFU, relative fluorescence units. The observed changes in intrinsic fluorescence ( F) were then plotted as a function of either D-glucose (C) or D-galactose (D) concentration. The solid lines in panels C and D reflect the best-fit curves, calculated by use of equation 1 (see Materials and Methods), that were used to derive the respective Kd values.
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Fluorescence titrations (Fig. 4A and 4B) were then used to determine the binding affinities (Kd values) for D-glucose and D-galactose binding to Tp38.
F versus the concentration of D-glucose or D-galactose was determined by use of equation 1, and the apparent Kd for each case was estimated from the respective curves (Fig. 4C and D). By this approach, the calculated Kd of D-glucose was 152.2 ± 20.73 nM (Fig. 4C), which compares favorably to the Kd value (117 nM) for E. coli MglB (26). These data are also consistent with the simple binding character of other bacterial ligand-binding proteins, and in addition, Scatchard analysis yielded a linear plot (not shown). In analogous experiments, the derived Kd of D-galactose was 251.2 ± 55.25 nM (Fig. 4D), which is almost twofold higher than the Kd of D-glucose. The lower Kd for D-glucose again was consistent with a possible predilection by Tp38 for D-glucose.
Trp-145 is implicated in the sugar-binding pocket of Tp38. Tp38 contains six Trp residues, at positions 37, 106, 145, 157, 262, and 280 (3). Members of our laboratory previously postulated (3) that Trp-145 is equivalent in importance to Trp-183, which contributes to the binding pocket of E. coli MglB and mediates the hydrophobic contact between the protein and D-glucose or D-galactose (6). To test this hypothesis, we performed site-directed mutagenesis to create a Tp38 mutant protein (W145F) wherein Trp-145 was replaced with Phe. For comparative purposes, one other mutant Tp38 protein was created wherein Phe was substituted for Trp-37 (W37F). In the presence of 1.0 µM D-glucose, the mutant protein W37F displayed a fluorescence change comparable to that of wild-type Tp38 (Fig. 5), indicating normal binding of D-glucose by the W37F protein. In contrast, the fluorescence emission spectrum of the W145F mutant protein was only 8.4% of that observed for wild-type Tp38 in the presence of D-glucose, denoting the failure of the W145F protein to bind D-glucose (Fig. 5). The failure of the W145F mutant protein to bind D-glucose was not attributable to changes in the protein's secondary structure, in that the CD spectra of the W145F mutant protein and wild-type Tp38 were identical (Fig. 2). The simplest explanations for these combined observations are that Trp-145 in wild-type Tp38 is an important residue for the binding of D-glucose and that Trp-145 likely resides in or very near the glucose-binding pocket.
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FIG. 5. Percent change in intrinsic fluorescence of wild-type Tp38 and mutant proteins W37F and W145F exposed to D-glucose (1 µM). The percent change in intrinsic fluorescence of wild-type Tp38 exposed to D-glucose was considered to be 100%; all other values were expressed as a proportion of this maximal value.
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Ligand-binding proteins of ABC import systems tend to be divergent at the primary sequence level (42). However, based on selected sequence homologies, they can been classified into nine clusters (35). The sugar-binding proteins belong to cluster 2 and bind their ligands with relatively high affinities (Kd values are in the nanomolar range) (4, 26), consistent with the observed binding affinity for D-glucose to Tp38 described herein. However, even the high-affinity binding proteins can display dual specificities with comparable binding affinities, such as has been noted for D-glucose and D-galactose binding to E. coli MglB (26). Whereas the dual binding specificity of enteric MglB for D-glucose and D-galactose may have metabolic importance for E. coli, we challenge the biological relevance of the same observation herein for Tp38. First, it is questionable whether T. pallidum would even encounter meaningful levels of D-galactose in human tissues or body fluids, inasmuch as D-galactose levels in human plasma are >1,000-fold lower than those of D-glucose (29). Second, in extensive in vitro studies of carbohydrate utilization by T. pallidum, which can metabolize sugars in vitro or undergo limited replication in a tissue culture model system (30), D-galactose was not utilized by treponemes in any discernible fashion (7, 28, 30, 36). In fact, all studies thus far have suggested that T. pallidum utilizes D-glucose as its principal, if not sole, carbon and energy source (1, 2, 28, 30, 36). It is thus plausible that the observed D-galactose binding to Tp38 is a reflection merely of the monosaccharide's close structural relatedness (as a C4 epimer) to D-glucose and is therefore not likely to be biologically relevant to T. pallidum's sustenance within its human host.
MglB of enteric bacteria also serves an important role in the signal transduction events of chemotaxis. Upon binding carbohydrate, MglB interacts specifically with the sensory transducer Trg, a methyl-accepting chemotaxis protein (MCP), to induce a chemotactic response (18, 24). By extrapolation, Tp38 (or TpMglB-1) may also interact with a T. pallidum homolog of Trg or another T. pallidum MCP, at least four of which have been predicted for T. pallidum (Tp0040, Tp0488, Tp0639, and Tp0640) (11, 14, 16). Indeed, the clinical manifestations of syphilis (23) as well as the invasive behavior of treponemes in tissue culture model systems (43) reflect the propensity of T. pallidum to migrate through the skin, hematogenously disseminate, and ultimately invade targeted tissues. Treponemal motility is believed to be essential to all of these events, and thus it is likely that chemotaxis is an important facet of syphilis pathogenesis (5). It is therefore not implausible that via glucose binding to Tp38 (or to TpMglB-1) and an interaction with a cognate MCP, treponemal chemotaxis may be driven by local glucose concentration gradients in tissues and body fluids (25, 37). Finally, T. pallidum appears to contain all elements of the functional apparatuses that are requisite for glucose-mediated chemotaxis, such as the environmentally responsive sensory transducer (cognate MCP for Tp38 or TpMglB-1), response regulators and accessory molecules for chemotaxis (e.g., Che proteins), and the flagellar motor and switch proteins (11, 14-17, 22; S. R. Greene, N. R. Young, J. G. Frye, and L. V. Stamm, Abstr. 96th Gen. Meet. Am. Soc. Microbiol. 1996, abstr. D-49, p. 250, 1996). The discernment of the glucose-binding function for Tp38 herein thus is a potentially important first step towards evaluating Tp38's putative interaction with a cognate MCP and elucidating sensory transduction modules that are relevant to T. pallidum virulence and syphilis pathogenesis.
This study was supported by NIH grant AI-16692 from the National Institute of Allergy and Infectious Diseases and by grant I-0940 from the Welch Foundation.
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