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Journal of Bacteriology, August 2005, p. 5560-5567, Vol. 187, No. 16
0021-9193/05/$08.00+0 doi:10.1128/JB.187.16.5560-5567.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Department of Plant Pathology, Cornell UniversityNew York State Agricultural Experiment Station, Geneva, New York,1 New York State Department of Health, Wadsworth Center, Empire State Plaza, Albany, New York2
Received 18 March 2005/ Accepted 25 May 2005
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FIG. 1. Scanning electron micrographs of tangential sections through grapevine and associated xylem vessels. (A) Water-conducting xylem vessels (several of which are noted within the white square) of a grapevine cross section serve as the habitat for X. fastidiosa cells. Bar, 200 µm. (B) View into a sectioned xylem vessel with X. fastidiosa cells attached to the vessel walls. Bar, 10 µm.
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Mutagenesis. The EZ::TN transposome system (7) was used to generate X. fastidiosa mutants. Electrocompetent cells were prepared according to published procedures (7). Xylella fastidiosa was cultured in modified PW liquid medium at 28°C on a rotary shaker (180 rpm) for 7 days. The cell culture was spread onto modified PW plates and incubated for 7 days at 28°C, at which time cells were gently washed off each plate with 2 to 3 ml of modified PW medium. The cells were centrifuged (5,000 x g) at 4°C for 5 min; washed in 10 ml of cold, sterile 10% glycerol; concentrated by centrifugation; and resuspended in 1 ml cold 10% glycerol. The suspension was centrifuged again and resuspended in 10% glycerol to a final concentration of approximately 109 cells ml1 and held on ice until electroporated with the EZ::TN transposome.
One microliter of EZ::TN <KAN-2> Tn5 transposome (20 ng of transposon DNA) was mixed with 40 µl electrocompetent cells. The mixture was placed in a 0.2-cm-gap electroporation chamber (Bio-Rad, Hercules, CA), and electroporation was conducted at 2,500 V, 200
, and 25 µF for 5 ms. Electroporated cells were transferred to 1 ml modified PW medium and incubated with agitation at 28°C for 24 h. Then 50 µl of the cell suspension was plated onto PW agar containing 50 mg liter1 kanamycin. For controls, electroporated cells were also plated onto PW medium without kanamycin, and the wild-type strain was plated onto PW agar with kanamycin. Fifteen individual colonies from the PW plates containing kanamycin were checked for Tn5 insertion by PCR. Each mutant of interest was examined by Southern analysis (23) to confirm a single Tn5 insertion; i.e., genomic DNA was cut with EcoRI, separated on a 1% agarose gel, and probed with a 0.6-kb fragment derived from the Tn5 sequence by using the DIG High Prime DNA labeling and detection starter kit I (Roche, Mannheim, Germany).
Screening for twitching mutants. Thirteen hundred individual X. fastidiosa colonies from the transposon mutagenesis were picked with sterile toothpicks and spotted in quadruplicate onto fresh PW agar plates that prior to spotting were air dried, uncovered, in a laminar-flow hood for at least 15 min. Following incubation at 28°C for 3 days, the edge morphology of the colonies was examined using a dissecting microscope. Colonies with a peripheral fringe were designated as having a wild-type twitching phenotype. Colonies lacking a peripheral fringe were designated as having a twitching defect. These mutants were screened a second time to verify the morphological trait. From 1,300 mutants, we identified 10 that lacked a peripheral fringe and several with a reduced fringe.
Screening for biofilm-modified mutants. Mutants were screened for biofilm formation (19) in PD2 medium (4) on polystyrene microtiter plates. Wild-type X. fastidiosa and liquid PD2 medium were used as positive and negative controls, respectively. Plates were incubated for 7 days at 28°C. The assay was repeated at least twice to confirm the biofilm phenotype for specific mutants. Quantification of biofilm was performed according to published protocols (19).
Growth rate analysis. Growth rates of wild-type and mutant X. fastidiosa were determined by transferring 5- to 7-day-old cells grown on PW agar into liquid PW medium. The initial optical density for each culture was adjusted to an absorbance of 0.05 at 600 nm. Three milliliters of each culture was added to a 13- by 100-mm glass tube and incubated at 28°C with continuous agitation at 175 rpm. Cell density was determined at regular intervals by measuring optical density at an A600.
Sequencing of mutants. EcoRI or HindIII was used to digest the genomic DNA of mutants. Fragments were ligated into pUC18 for sequencing. DNA fragments flanking the Tn5 insertion were sequenced, edited with DNASTAR (University of Wisconsin), and analyzed with BLAST against the genome sequence of X. fastidiosa Temecula (http://aeg.lbi.ic.unicamp.br/world/xfpd/).
Fabrication of microfluidic chambers. Polydimethylsiloxane (PDMS) (Sylgard 184; Dow Corning, Midland, MI) microfluidic chambers were created from silicon wafer masters on which negative photoresist (SU-8 50; MicroChem, Newton, MA) was patterned using standard lithographic methods (31). For preparation of the chambers, unpolymerized PDMS was poured over the SU-8 and cured at 60°C for 1 h. Spacers, as depicted in Fig. 2, were used to maintain the thickness control of the overall chamber dimensions and to create an air chamber above the microfluidic channels. Following curing, the PDMS device was released from the photoresist wafer master. Openings were bored through the PDMS at the patterned channel ends, which were later used to fit supply tubing. Prior to assembly of the chamber, the PDMS replica and a glass coverslip (no. 11/2, 22 by 40 mm; Corning) were exposed to an air plasma at 30 W for 2 min (3). To provide additional stability to the otherwise flexible PDMS chamber, the underside of the chamber was similarly plasma sealed to a 51- by 76-mm microscope slide previously bored with circular openings to be aligned over the inlet/outlet positions. Silicone rubber tubing (5.1-mm outside diameter, 2.1-mm inside diameter, 0.8-mm wall; Cole-Parmer, Vernon Hills, IL) was inserted into each opening of the PDMS replica and sealed with unpolymerized PDMS, cured, and reinforced with Torr Seal (Varian, Inc., Lexington, MA). The tubing was then connected to the barbed end of plastic luer connectors (Cole-Parmer) that were in turn connected to a waste reservoir or to a 5-ml gastight syringe (Hamilton Company, Reno, NV) controlled with a syringe pump (Pump 11 Pico Plus; Harvard Apparatus, Holliston, MA).
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FIG. 2. Fabrication process and mounting of the microfluidic chamber (100 µm deep, 100 µm wide, and 14 cm long). Si, silicon.
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1% of the area of chamber walls. Unbound cells were flushed from the chamber, after which the flow was decreased to the desired rate prior to image capture. Light microscopy. Temporal and spatial studies of bacterial attachment and migration via twitching were conducted in the microfluidic chambers mounted on an inverted microscope using 40x phase-contrast optics. Time-lapse images were recorded with a SPOT-RT digital camera (Diagnostic Instruments, Inc., Sterling Heights, MI) controlled by MetaMorph image software (Universal Imaging, Downington, PA). The migration displacement of X. fastidiosa cells exhibiting twitching motility was measured by mapping cell positions in Cartesian coordinates with respect to time, with the origin being the starting position of the cell. The frame-by-frame velocities of the twitching cells were measured by calculating the centroid position of the cell at each time interval. All experiments were conducted at room temperature (23 ± 2°C).
Electron microscopy. Specimens were prepared for scanning electron microscopy by chemical fixation in 1% aqueous osmium tetroxide at 4°C for 18 h, after which they were rinsed, dehydrated, critical-point dried, and sputter coated with gold. For transmission electron microscopy, cells were obtained from either the peripheral fringe of 2-day-old colonies or by scraping cells from the agar surface spread with cells 24 h earlier. Cells deposited on Formvar-coated grids were negatively stained with phosphotungstic acid. Pilus lengths were determined from digitized micrograph negatives by using the MetaMorph image analysis software.
Basipetal movement in plants. Grape plants (Vitis vinifera cv. Chardonnay) were needle inoculated (9) at the seventh internode from the shoot apex with cell suspensions of wild-type and mutant (1A2, 5A7, and 6E11) X. fastidiosa cells in a succinate-citrate-phosphate buffer, pH 7.0 (10). Plants were maintained on a cycle of 12 hours of light and 12 hours of darkness at 28°C in a greenhouse. After 11 weeks, vines were cut from the main trunk and surface sterilized, and 1-cm sections were aseptically excised at measured distances basipetally from the original point of inoculation. The 1-cm sections were crushed in sterile polycarbonate bags containing 100 µl of sterile distilled water. The triturate was spread onto PW agar (for wild-type X. fastidiosa) or PW agar containing kanamycin (for mutant X. fastidiosa). Following 6 days at 28°C, the plates were examined for the presence of X. fastidiosa. PCR was used to confirm the identities of the isolates. In addition, the twitching phenotype was confirmed microscopically. To determine an approximate maximum distance for basipetal transport due to cavitation of the grape sap column at the onset of the incubation period, 0.2-µm-diameter fluorescent beads (Molecular Probes, Inc., Eugene, OR) were similarly introduced into grape shoots, which were subsequently cross-sectioned and examined for the presence of the beads.
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FIG. 3. Twitching motility characteristics of wild-type X. fastidiosa. (A) Light micrograph of a colony with a peripheral fringe. (B) Sequential images (0 min, 7 h 18 min, and 14 h 20 min, left to right) depicting progressive migration of twitching cells (see movie 1A in the supplemental material; also see expanded versions and additional movies at http://www.nysaes.cornell.edu/pp/faculty/hoch/movies/). Bar, 20 µm. (C) Light micrograph depicting paths of three bacteria (circled) twitching against a flow of 20,000 µm min1 (see movie 2 in the supplemental material and the expanded versions and additional movies at the above-cited website). Bar, 10 µm. (D) Similar depiction as in panel C, but with no flow (see movie 3 in the supplemental material and the expanded versions and additional movies at the above-cited website). Bar, 10 µm. (E and F) Twitching speed and cumulative distance traveled by the red-circled cells in panels C and D, respectively. (G and H) Histograms depicting twitching speeds for cells under flow (20,000 µm min1) (G) and no-flow (H) conditions. Error bars represent standard errors of the mean (n = 17). (I and J) Twitching paths (starting at coordinates 0,0) measured in a 1-h period for cells under conditions of flow (20,000 µm min1) (I) and no flow (J). Bar, 20 µm.
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100 µm h1) than under rapid-flow conditions (
70 µm h1) (Fig. 3E and F), the total displacement (from point of origin to final cell position) by actively migrating cells was always greater under flow conditions (Fig. 3I and J). Cells migrating under rapid-flow conditions spent significantly more time (75%) traveling at speeds of
1.5 µm min1 (Fig. 3G), whereas cells under no-flow conditions spent only 40% of the time traveling at this rate (Fig. 3H). This can be attributed to the increase in resistance to movement at higher fluid flows.
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FIG. 4. Pili of wild-type and mutant X. fastidiosa. (A) Scanning electron micrograph of wild-type cells attached to the substratum at the pilus-bearing polar ends. Many pili degenerated into globular masses during specimen preparation. (B and C) Transmission electron micrographs of negatively stained (phosphotungstic acid) wild-type cells depicting an abundance of short pili (B), and fewer long type IV pili (C). (D and E) Negatively stained preparations of mutants 1A2 and 6E11 depicting only short pili and only longer (type IV) pili, respectively. Pilus lengths are noted in Fig. 8. Bars, 1 µm.
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FIG. 5. Xylella fastidiosa mutant characteristics. (A) Light micrograph of X. fastidiosa mutant 1A2 colony on agar medium with a well-demarcated fringeless periphery. (B) Sequential images (0 min and 20 h 19 min, respectively) depicting progressive expansion of the 1A2 colony (see movie 1B in the supplemental material; also see expanded versions and additional movies at http://www.nysaes.cornell.edu/pp/faculty/hoch/movies/). Bar, 20 µm.
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FIG. 6. Genomic organization of genes flanking Tn5 insertions in X. fastidiosa mutants 1A2, 5A7, and 6E11. nt, nucleotide.
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Biofilm formation. Since type IV pili have been implicated in biofilm development (18) and the ability of X. fastidiosa to cause disease, we sought to characterize biofilm formation in the wild type and mutants. Both mutants 1A2 and 5A7 had greater biofilm production than the wild-type strain (Fig. 7A and B). Mutant 6E11, which retained the peripheral-colony fringe and twitching motility phenotypes (see movie 5 at http://www.nysaes.cornell.edu/pp/faculty/hoch/movies/), was biofilm deficient (Fig. 7A and B). All three X. fastidiosa mutants (1A2, 5A7, and 6E11) grew at a rate similar to that of the wild type (Fig. 7C).
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FIG. 7. Biofilm production and growth curves of the X. fastidiosa wild type and mutants. (A) Biofilm formation by the X. fastidiosa wild type and mutants 1A2, 5A7, and 6E11 following 7-day growth at 28°C. Biofilms were stained with 0.1% crystal violet. (B) The crystal violet stain was subsequently removed from the tubes with dimethyl sulfoxide and quantified for optical density at 620 nm. OD, optical density. (C) Growth curves for the X. fastidiosa wild type and mutants 1A2, 5A7, and 6E11 in PW medium at 28°C.
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FIG. 8. Pilus measurement in X. fastidiosa. Histograms of pilus length distributions for the wild type (A) and mutants 1A2 (B) and 6E11 (C). Number of cells represented were 11 (A), 12 (B), and 14 (C).
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FIG. 9. Basipetal translocation of X. fastidiosa in planta. Maximum distances for wild-type and mutant X. fastidiosa cells were recovered from grapevine regions upstream of the inoculation sites (represented by 0 on the y axis; arrow of illustrated vine) after 11 weeks. The light-gray horizontal band is the zone representing the maximum distance that 0.2-µm fluorescent latex beads traveled passively. Error bars represent standard errors of the means.
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What induces X. fastidiosa to migrate upstream in a flowing medium? We hypothesize that twitching motility against a stream is related to the physical forces of flow. Accordingly, X. fastidiosa cells attach to the substratum via the short class of pili located predominately at one pole (Fig. 4A and B), and under flow conditions, the tethered cells tilt downstream, thus angling the attached pole toward the upstream direction. Since the majority of the type IV pili are extruded from a symmetrical region at this pole through PilQ-mediated and -gated pores, most will "reach" forward and anchor to the substratum in the upstream regions. Few of these type IV pili will extend to downstream regions. As the pili are retracted, the cells will move in an incremental step upstream. The direction of flow will keep the cells more or less slanted downstream; thus, cell movement will be oriented directly upstream. With repeated extension and retraction of additional pili, such twitching motility will culminate in long-distance upstream travel. Under no-flow conditions, we predict that the type IV pili will be extruded and attach in random directions from the attached position of the cell, resulting in nonoriented twitching motility. If the directional migration facilitated by type IV pili observed in X. fastidiosa cells is due to the physical forces of flow, then such directional movements would also occur with other type IV piliated, rod-shaped bacteria, such as P. aeruginosa and Vibrio cholerae (14, 20). In fact, recent observations in our laboratory with a nonflagellated strain of P. aeruginosa (26) indicate that they, too, migrate preferentially against the flow of growth medium in the microfluidic channels (unpublished data; see additional movies at http://www.nysaes.cornell.edu/pp/faculty/hoch/movies/).
In the microfluidic channel with mean flow velocities of 20,000 µm min1, X. fastidiosa cells migrated against the direction of flow at ca. 5 µm min1. While 20,000 µm min1 is the mean flow velocity for the microfluidic channel, the actual flow velocity 1 to 2 micrometers away from the channel wall in the zone affecting the attached bacteria, based on a Reynolds number of 0.03, is between 1,584 and 3,136 µm min1, which is equivalent to a shear force of about 82 fN. Pilus-induced tension in N. gonorrhoeae was previously shown to be about 110 pN (13), which greatly exceeds the shear force calculated above. If type IV pili are of comparable strengths in all bacteria, it would not be surprising to find that X. fastidiosa is able to migrate upstream against the flow rates used in this study. In the present system, 20,000 µm min1 represents a continuous mean flow velocity, and although this rate is within the range of flow for xylem sap in grapevines under high transpiration conditions (21), it would not be sustained through diurnal cycles where transpiration would fluctuate. Furthermore, the rate of long-distance migration of X. fastidiosa is unimpeded in our artificial microfluidic system, whereas in planta, xylem pit membranes and other xylem vessel obstacles would conceivably lower the rate of spread.
Under no-flow conditions in the microfluidic channels, X. fastidiosa cells exhibited twitching motilities of ca. 25 µm min1, but unlike under flow conditions, total twitching distance and displacement were limited, and the direction of travel was randomly oriented (Fig. 3D, F, and J). This twitching speed is comparable to that of other twitching bacteria, e.g., P. aeruginosa, under no-flow conditions, whose twitching speed has been observed to be ca. 30 µm min1 (26).
In this study, we demonstrated that X. fastidiosa cells possess two morphologically distinct classes of pili, shorter 0.4- to 1.0-µm pili and longer 1.0- to 5.8-µm pili (Fig. 4B and C and 8). We believe that the longer pili are equivalent to type IV pili based on their length, their polar position, and the fact that disruption of the pilB and pilQ genes in X. fastidiosa resulted in cells that bore only the short pili and did not twitch (Fig. 4E). The gene products PilB and PilQ have been well studied in a number of other bacterial species. PilB is known to function as a nucleotide binding protein supplying energy for pilin subunit translocation and assembly, whereas PilQ is a multimeric outer membrane protein that forms gated pores, through which the pilus is extruded (1, 28, 29). Mutants deficient in these proteins have smooth-colony edge phenotypes, do not twitch, and are generally devoid of type IV pili (1, 11, 12, 28). Genomic data indicate that the fimA gene ortholog in X. fastidiosa (5) and the fimA gene in E. coli (17) code for an essential type I pilus protein that functions in surface attachment and biofilm formation. The presence of both long and short pili on the wild-type X. fastidiosa strain, the occurrence of only long pili on the twitching, biofilm-deficient mutant (6E11), and the absence of long pili on the twitch-minus, biofilm-enhanced mutants (1A2 and 5A7) clearly indicate distinct functional roles for the two length classes of pili. Moreover, the correlation between enhanced biofilm formation in mutants with only short pili (1A2 and 5A7) and decreased biofilm formation in the mutant with no short pili (6E11) strongly suggests that short pili are important in surface attachment and biofilm development. Furthermore, disruption of the fimA gene in X. fastidiosa mutant 6E11 resulted in cells bearing only long pili (Fig. 4E). Mutant 6E11 is motile at a rate not significantly different than that for the wild-type strain (data not shown).
We inoculated grapevines with wild-type and mutant X. fastidiosa cells to confirm in vitro observations with pilus-mediated basipetal movement as it might occur in planta. Translocation of X. fastidiosa from inoculation sites has been documented mostly quantitatively for acropetal movement through destructive sampling and culturing techniques, as well as through histological examination (16, 22, 27). Quantitative data on basipetal, i.e., upstream, movement of this pathogen are not readily available. Initial translocation of X. fastidiosa artificially inoculated into grapevines by using the "needle technique" is complicated by the fact that embolism of the xylem water column usually accompanies the procedure and transports bacteria both basipetally and acropetally from the inoculation site. In the present study, fluorescent latex beads were used to obtain an estimate of the relative distance these beads were carried by the cavitated water column. This distance was assumed to be representative of the initial distance bacteria would have been transported following embolism and was used as the starting point in evaluating subsequent migration of bacteria. Only the bacteria which possess longer type IV pili (i.e., the wild type and the 6E11 mutant) were able to migrate substantial distances basipetally (Fig. 9). Calculations made from these distances after 11 weeks reveal that they migrated at estimated speeds of 3 to 5 µm min1, a rate within the 0.1- to 25-µm min1 range observed in vitro. Furthermore, mutant 6E11 exhibited migration distances greater than that of the wild type, which may be due to the absence of the shorter type I pili, thus suggesting their role in adhesion (5).
Our results present the first direct observation of twitching motility by a plant-pathogenic bacterium. This phenomenon may very well explain how X. fastidiosa and other nonflagellated gram-negative xylem-limited bacteria are able to spread within plants against the prevailing direction of xylem sap flow to previously noninvaded regions. These findings on twitching-mediated motility present a newly observed phenomenon for cell migration in fluid systems and should be applicable to future studies of the X. fastidiosa-grape system as well as in other bacterial-plant and bacterial-mammalian systems.
The research was supported, in part, by grants from the Nanobiotechnology Center (NBTC), an STC program of the National Science Foundation under agreement no. ECS-9876771, and from the USDA/CSREES administered through the University of California Pierce's Disease Research Grants Program. This work was also performed, in part, at the Cornell Nanofabrication Facility (a member of the National Nanofabrication Users Network) which is supported by the National Science Foundation under grant ECS-9731293, its users, Cornell University, and Industrial Affiliates.
Supplemental material for this article may be found at http://jb.asm.org/. ![]()
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