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Journal of Bacteriology, November 2005, p. 7425-7433, Vol. 187, No. 21
0021-9193/05/$08.00+0 doi:10.1128/JB.187.21.7425-7433.2005
Copyright © 2005, American Society for Microbiology. All Rights Reserved.
Karita D. Ambrose,
and
Janet Yother*
Department of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama 35294
Received 1 June 2005/ Accepted 24 August 2005
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The enzymes uniquely required for capsule synthesis in S. pneumoniae are encoded within a single locus on the chromosome (3, 16, 17, 21, 35). The genes are organized in a cassette structure with type-specific genes needed to synthesize each capsule being flanked by genes that are common to all capsule types (3, 17, 21, 41, 42). CpsA, -B, -C, and -D, encoded by the upstream common genes, are highly conserved among serotypes and have been proposed to play a role in modulating capsule amounts and chain length (8, 37, 41-43). CpsE, the initiating glycosyltransferase, is encoded by the next gene in most S. pneumoniae capsule loci and has been designated a type-specific gene (21). However, it also is highly conserved among serotypes, with the majority of CpsE proteins sharing 70 to 98% amino acid identity (28, 32, 37, 41, 54), and should be reclassified as a common protein. Using high-stringency Southern blots, Morona et al. have demonstrated that cpsA and cpsB are highly conserved among capsule serotypes but that cpsE, along with cpsC and cpsD, can be grouped into two classes (41). This result suggests that the functions of the proteins encoded by cpsC, cpsD, and cpsE are interrelated. CpsC and CpsD together encode an autophosphorylating tyrosine kinase involved in controlling the amount or size of the capsule (9), while CpsE shares homology with glycosyltransferases, including WbaP from Salmonella enterica serovar Typhimurium (33), CpsE (formerly designated CpsD) from Streptococcus agalactiae (49), and GumD from Xanthomonas campestris (29). CpsE in S. pneumoniae capsule types 14 and 9v is a 455-amino-acid membrane-localized protein that initiates repeat unit formation by adding the first sugar to a lipid acceptor (35, 36, 45, 54). Based on its homology with WbaP, which initiates repeat unit formation in Salmonella enterica O-antigen synthesis (33, 44) and Escherichia coli group 1 capsule synthesis (18), CpsE is thought to catalyze the addition of a hexose-1-phosphate to an undecaprenyl phosphate lipid acceptor (21). Although Cps14E, Cps9vE, and Cps8E from S. pneumoniae have been shown to utilize UDP-Glc to synthesize a Glc-containing glycolipid, neither the lipid acceptor nor the precise activity of the enzyme has been demonstrated (35, 36, 45, 54).
To further characterize CpsE activity and the lipid acceptor, we used membranes isolated from the S. pneumoniae type 2 strain D39 and an E. coli recombinant expressing Cps2E. The type 2 capsular repeat unit is a branched hexasaccharide containing glucose, rhamnose, and glucuronic acid (Fig. 1) (30). Although the initiating sugar for the type 2 capsule repeat unit is not known, Kolkman et al. demonstrated that membranes from type 2 S. pneumoniae can incorporate [14C]Glc into a lipid product, suggesting that Glc is the first sugar added to the repeat unit (37). We demonstrate here that Cps2E catalyzes the reversible addition of Glc-1-phosphate from UDP-Glc to a polyprenyl phosphate acceptor.
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FIG. 1. The repeating structure of S. pneumoniae type 2 capsular polysaccharide (30). Glc, glucose; Rha, rhamnose; GlcUA, glucuronic acid.
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Bacterial strains, growth conditions, and membrane preparations. The S. pneumoniae strains listed in Table 1 were grown in Todd-Hewitt broth supplemented with 0.5% yeast extract or on blood agar plates (BAP) containing blood agar base no. 2 (Difco) and 3% defibrinated sheep blood (Colorado Serum Company). Membranes from S. pneumoniae cells were isolated as previously described (12), except that the final membrane preparations were washed and suspended in 100 mM Tris-acetate (pH 7.5) containing 10% glycerol.
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TABLE 1. Strains and plasmids used in this study
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Construction of cps2E mutants.
cps2E deletion mutants were generated in S. pneumoniae D39 by previously described techniques (23). Briefly, PCR fragments flanking cps2E were generated using type 2 S. pneumoniae strain D39 chromosomal DNA as a template and primer pairs cps2E-5/cps2T-1 and cps2D-3/cps2E-6, whose sequences and locations in the published type 2 capsule sequence are indicated in Table 2. The resulting two PCR products were cloned separately into pGEM-T Easy (Promega) and maintained in DH5
F'. The cps2E-5/cps2T-1 product was excised by digestion with SacII and SacI, while the cps2D-3/cps2E-6 product was excised by digestion with SpeI and SacII. Both excised products were ligated together into pJY4163 digested with SpeI and SacI. The resulting plasmid, designated pKA211, was used to transform competent D39 (22). Transformants were plated on blood agar plates without selection. Small colonies, indicative of loss of capsule production, were isolated and screened for the cps2E deletion using PCR amplification with primers cps2D-3 and cps2T-1. Deletion mutants yielded a 1,173-bp PCR product, in contrast to the 2,480-bp product of the parent D39. Mutants from two independent transformations were designated KA1521 and KA1522. Using indirect enzyme-linked immunosorbent assays performed as previously described (9), no capsule was detected in these strains.
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TABLE 2. Primers used in this study
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A 492-bp product encoding the C-terminal portion of Cps2E (amino acids 291 to 455) was amplified from D39 chromosomal DNA using primers cps2E-9 and cps2E-12. As above, the PCR product was cloned into pCRII-TOPO and excised with NdeI and XhoI. The excised product was cloned into pET20b in frame with the His6 tag of the vector, generating pMB091, which was maintained in E. coli BL21-AI.
Cps2E antiserum preparation and immunoblot analyses. Two liters of MB091 was grown to a cell density of 1 x 109 CFU/ml and induced with arabinose as described above. Bacteria were pelleted by centrifugation at 7,000 x g, suspended in 25 ml of pH 8.0 denaturing buffer (8 M urea, 100 mM NaH2PO4, and 10 mM Tris), and mixed at room temperature for 1 h. Insoluble cell debris was pelleted by centrifugation at 10,000 x g for 10 min, and the supernatant was mixed with 4 ml of a 50% Ni-nitrilotriacetic acid (QIAGEN) slurry for 1 h at room temperature. The lysate resin was allowed to settle in a column and washed twice with 4 ml of denaturing buffer (pH 6.3). Proteins bound to the resin were eluted by washing 4 times with 0.5 ml of denaturing buffer (pH 5.9). The eluted samples were separated on a sodium dodecyl sulfate-10% polyacrylamide gel and visualized by Coomassie staining. The protein band corresponding to the size of the C-terminal portion of Cps2E (26 kDa) was excised. The polyacrylamide gel fragment was placed in 2 ml of PBS, and the protein was extracted by grinding the gel with a mortar and pestle. The acrylamide fragments were removed by centrifugation, and the resulting protein (1 mg) was used for antiserum production in rabbits by Gemini Research (Odenville, AL).
To detect Cps2E in S. pneumoniae and E. coli, membranes prepared as described above and containing 5 to 15 µg of total protein were separated on a sodium dodecyl sulfate-10% polyacrylamide gel. Immunoblots were performed as previously described (62), except that membranes were blocked for 1 h at room temperature in 5% nonfat dried milk, 1% bovine serum albumin, and 0.05% Tween 20 in PBS. The primary antibody was a 1:5,000 dilution of the rabbit polyclonal antiserum directed against the C-terminal portion of Cps2E, prepared as described above, that had been absorbed against the cps2E deletion strain KA1522.
Chromatography. Silica gel G plates were chromatographed in butanol-ethanol-water (5:3:2) or butanol-acetic acid-water (50:12:24) followed by autoradiography. Samples spotted on paper were chromatographed in ethanol-1 M ammonium acetate (pH 5.5) (65:35). Paper chromatograms were cut into 1-cm strips, and the amount of radioactivity in the strips was determined by liquid scintillation counting.
Glycosyltransferase assays. Cps2E activity was determined as previously described for Cps14E (35). Briefly, membranes (amounts indicated in relevant figure legends) were incubated at 10°C in 100-µl reaction mixtures containing 5 mM Tris-acetate (pH 7.5), 10 mM MgCl2, and UDP-[14C]Glc or UDP-[3H]Glc (label and amount indicated in figure legends). For assays containing exogenous lipids, 10 µl of 1% NP-40 was added to 100-µl aliquots of the lipid (5 mg/ml), which were then dried under a stream of nitrogen. The dried lipids were suspended in 100 µl of H2O, and dilutions were made in 0.1% NP-40. Ten microliters of the concentrated or diluted lipids was added to the reaction mixtures. All reactions were stopped by the addition of 1 ml chloroform-methanol (2:1) and vortexed briefly, and the phases were allowed to separate. The upper phase was removed and the organic phase was extracted three times with 200 µl pure solvent upper phase (PSUP; 1.5 ml chloroform, 25 ml methanol, 23.5 ml H2O, and 0.183 g KCl). The organic phase was dried, and the amount of radioactivity was determined by liquid scintillation counting. For analysis by TLC, the lipid-containing products were dried under a stream of nitrogen and then solublized in 20 µl chloroform-methanol (1:1).
Assay for Cps2E-catalyzed formation of UDP-Glc. Labeled glycolipid was synthesized as described above for the glycosyltransferase assay using either 1 µM UDP-[3H]Glc or UDP-[14C]Glc. For reactions containing UDP-[3H]Glc, the glycolipids were labeled in 200-µl reaction mixtures containing D39 membranes (80 µg of total protein) and 20 µg of C60-P for 10 min at 10°C. The labeled glycolipids were extracted as described for the glycosyltransferase assay. The organic phase containing the labeled glycolipids was dried under a stream of nitrogen and suspended in 100 µl of chloroform-methanol (1:1). Ten microliters of 1% NP-40 was added to the lipid extract, and the sample was dried again under a stream of nitrogen. The labeled glycolipids were suspended in 100 µl H2O. Ten microliters of the 3H-labeled glycolipid was incubated in 100-µl reaction mixtures containing 5 mM Tris-acetate (pH 7.5), 10 mM MgCl2, 100 µM UMP, and membranes from D39 or KA1522 for 30 min at 10°C. Reactions were stopped by the addition of 1 ml of chloroform-methanol (2:1), and the phases were allowed to separate. The upper aqueous phase was removed and saved. The lower organic phase was extracted twice with 200 µl PSUP, and the aqueous phases were combined with the initial aqueous phase. The combined aqueous phases were extracted once with 200 µl chloroform, and the organic phase was combined with the initial organic phase. The aqueous and organic phases were dried, and the amount of radioactivity present in both phases was determined by liquid scintillation counting.
For glycolipids labeled with 14C, reactions were stopped by being placed on ice, and the membranes were sedimented by centrifugation at 100,000 x g for 30 min. The membranes were washed with 5 ml of wash buffer (100 mM Tris-acetate [pH 7.5], 10% glycerol) to remove unincorporated UDP [14C]Glc and suspended in 100 µl of wash buffer. Ten microliters of the labeled membranes was incubated in 100-µl reaction mixtures containing 5 mM Tris-acetate (pH 7.5), 10 mM MgCl2, and 100 µM UMP or 100 µM TMP for 30 min at 10°C. Reactions were spotted on paper and chromatographed for 16 h in 95% ethanol-1 M ammonium acetate (pH 5.5) (65:35).
Alkaline hydrolysis, acid hydrolysis, and phospholipase D digestion of glycolipid products. Alkaline hydrolysis of lipid products synthesized as described above was carried out at 35°C for 20 min in 0.4 ml of 80% methanol containing 0.1 N NaOH. The mixture was neutralized with ammonium hydroxide, and the methanol was removed with a stream of nitrogen. Samples were analyzed by TLC. Acid hydrolysis was carried out in 20 mM HCl at 70°C for 20 min. The hydrolysates were neutralized with acetic acid, dried under a stream of nitrogen, and analyzed by TLC. Phospholipase D digestions were conducted in 100-µl reaction mixtures containing 10 mM CaCl2, 100 mM Tris-acetate (pH 8), and 5 U of phospholipase D from Streptomyces chromofuscus. Reaction mixtures were incubated at 30°C for 30 min and analyzed by paper chromatography in butanol-acetic acid-water (44:16:40). A reaction mixture that contained no acid, alkali, or phospholipase D was incubated under the same conditions as the treated samples and used as a negative control.
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cps2E), indicating that these products were not dependent on Cps2E activity. The migration of these products is consistent with the formation of mono- and diglycosyldiacylglycerol, two of the major lipids of S. pneumoniae membranes (11). Only a single product, which comigrated with the major Cps2E-dependent lipid product from S. pneumoniae, was observed with E. coli RC123 membranes (Fig. 2B). No products were observed with the E. coli vector control strain (RC124).
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FIG. 2. Separation of lipid products synthesized using S. pneumoniae and E. coli membranes containing Cps2E. (A) Membranes (300 µg of total protein) from type 2 S. pneumoniae strain D39 or its cps2E derivative KA1522 were incubated in 300-µl reaction mixtures containing 10 mM MgCl2, 5 mM Tris-acetate (pH 7.5), and 1 µM UDP-[14C]Glc (257 mCi/mmol) for 20 min at 10°C. Reactions were stopped by the addition of 1 ml chloroform-methanol (2:1), and lipids were extracted as described in Materials and Methods. Samples were applied as spots to a silica plate and chromatographed for 5 h in butanol-ethanol-water (5:3:2). Bands were visualized by autoradiography. [14C]Glc was run as a standard. (B) Membranes (40 µg of total protein) from E. coli strains RC123 (Cps2E+) and RC124 (vector control) were incubated in 100-µl reaction mixtures and processed as described for panel A.
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FIG. 3. Acid and alkaline hydrolysis of S. pneumoniae lipid products. Lipids (approximately 5,000 cpm) synthesized using D39 membranes as described in the legend to Fig. 2 were hydrolyzed in mild acid (Acid) or alkali (Alk) as described in Materials and Methods. The entire hydrolysate and an untreated sample (UT) were applied as spots to a silica plate, chromatographed, and visualized by autoradiography. [14C]Glc and [14C]Glc-1-phosphate were run as standards.
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cps2E) or the E. coli vector control strain RC124, indicating the increases in 3H incorporation observed with Cps2E-containing membranes from S. pneumoniae and E. coli were due to Cps2E activity (data not shown).
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FIG. 4. Addition of exogenous polyprenyl phosphates stimulates Cps2E activity. (A) Membranes (40 µg of total protein) from strain D39 or KA1522 ( cps2E) were incubated in 100-µl reaction mixtures containing 10 mM MgCl2, 5 mM Tris-acetate (pH 7.5), and 1 µM UDP-[3H]Glc. For reaction mixtures containing NP-40 and the indicated exogenous lipids, D39 membranes were incubated with 0.005 to 0.01% NP-40 prior to the addition of either 10 µl of 0.1% NP-40 or the indicated lipid (2 mg/ml) dissolved in 0.1% NP-40. The reaction mixtures were incubated for 10 min at 10°C and processed as described in Materials and Methods. Lipids were extracted, and the amount of radioactivity in the organic phase was determined by liquid scintillation counting. The data are the mean of duplicate samples ± the standard error. All samples except PE were significantly different from D39 (P < 0.005 for C60-P; P < 0.05 for all others). All samples were significantly different from NP-40 (P < 0.001 for C60-P; P < 0.01 for all others). (B) Membranes (40 µg of total protein) from E. coli strain RC123 or RC124 (vector control) were incubated for 10 min at 10°C in reaction mixtures processed as described for panel A. C60-P and Dol-P were significantly different from RC123 (P < 0.01 and < 0.05, respectively). All samples except PE were significantly different from NP-40 (P = 0.005 for C60-P; P 0.05 for all others). Results were compared using Student's t test. Dol-P, dolichyl phosphate (C85-105-P).
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FIG. 5. Separation of glycolipid products by TLC. Labeled lipids were synthesized using (A) D39 membranes or (B) E. coli RC123 membranes in the presence or absence of exogenous lipids as described in the legend to Fig. 4, except the nucleotide sugar was 1 µM UDP-[14C]Glc. Lipids were isolated as described in the legend to Fig. 1, applied as spots on a silica plate, and chromatographed for 6 h in butanol-acetic acid-water (50:12:25). Bands were visualized by autoradiography.
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TABLE 3. Inhibitors of Cps2E activitya
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FIG. 6. UMP is a competitive inhibitor of UDP-Glc. (A) Membranes from RC123 were incubated in 100-µl reaction mixtures containing 10 mM MgCl2, 50 mM Tris-acetate, 1 to 21 µM UDP-[14C]Glc, 10 µg of C60-P, and either no UMP (), 5 µM UMP ( ), or 10 µM UMP ( ) for 10 min at 10°C. Reactions were stopped and processed as described for glycosyltransferase assays in Materials and Methods. The amount of radioactivity in the organic phase was determined by liquid scintillation counting. (B) Plot of the reciprocal data from panel A.
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cps2E) membranes. In the presence of D39 membranes, a portion of the 3H was shifted from the organic phase to the aqueous phase. This shift was dependent on the amount of membranes added (Fig. 7A) and was linear with time for 30min (data not shown). Only 0.7% of the 3H was shifted to the aqueous phase when the labeled glycolipid was added to KA1522 membranes, indicating that Cps2E was required for the reaction. Similar results were obtained when labeled glycolipid was added to Cps2E-containing E. coli membranes (data not shown).
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FIG. 7. UMP stimulates synthesis of UDP-Glc from polyprenyl-P-P-Glc by Cps2E-containing membranes. (A) [3H]Glc-labeled glycolipids were synthesized and extracted as described in Materials and Methods. Ten microliters of the labeled glycolipid was added to reaction mixtures containing 10 mM MgCl2, 5 mM Tris-acetate (pH 7.5), 100 µM UMP, and either increasing concentrations of D39 membranes or 40 µg of KA1522 membranes for 30 min at 10°C. Reactions were processed as described in Materials and Methods, and the amounts of radioactivity present in the organic and aqueous phases were determined by liquid scintillation counting. The amount of radioactivity present in the aqueous phase of reactions that contained no membranes was subtracted as background. Data are the mean of duplicate samples ± standard errors. (B) Endogenous lipid acceptor was labeled with [14C]Glc as described in the legend to Fig. 2. The membranes were sedimented by centrifugation and washed to remove unincorporated UDP-[14C]Glc. The membranes were then incubated as described above with 100 µM UMP (), 100 µM TMP ( ), or no nucleotide ( ) for 30 min at 10°C. The reaction mixtures were applied as spots on paper and chromatographed overnight in ethanol-1 M ammonium acetate (pH 5.5) (65:35). The chromatogram was cut into 1-cm strips, and the amount of radioactivity was determined. The migration of a UDP-Glc standard visualized under UV is indicated on the graph.
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3) bond catalyzed by the type 2 polymerase. |
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FIG. 8. The biosynthetic repeat unit of S. pneumoniae type 2 capsular polysaccharide. The repeat unit is shown attached to the lipid anchor.
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Like the undecaprenyl pyrophosphate-linked repeat units of the Salmonella enterica serovar Newington (14) and Salmonella enterica serovar Anatum (59) O antigens, the xanthan repeat units from X. campestris (29), and dolichyl monophosphate Glc involved in protein glycosylation in rat liver cells (7), the polyprenyl pyrophosphate Glc synthesized by Cps2E was sensitive to treatment with mild alkali. This is in contrast to what has been reported for the undecaprenyl pyrophosphate-linked repeat units of enterobacterial common antigen (48), mannosyl monophosphoryl undecaprenol (39), and peptidoglycan (27). Alkaline hydrolysis has commonly been used to separate glycerophosphate lipids, which are saponified in mild alkali, from polyprenyl-based glycolipids, which are in general thought to be resistant to alkaline hydrolysis (24). Since some polyprenyl phosphate-linked sugars are sensitive to the same alkaline hydrolysis conditions used in saponification, care should be taken in using this method for purification or identification of polyprenyl phosphate-linked glycolipids. Wright proposed that the different susceptibilities of polyprenyl-linked sugars are due to both the isomeric arrangement of the sugar and its anomeric configuration (59). If the hydroxyl group on carbon 2 of the sugar is cis to the hydroxyl on the adjoining phosphate, then the linkage is susceptible to alkaline hydroysis, while the trans arrangement is less susceptible. Since Cps2E catalyzes the transfer of Glc-1-P, the anomeric configuration of UDP-Glc is retained during the transfer, making the hydroxyl groups cis and thus susceptible to alkaline hydrolysis.
The level of undecaprenyl phosphate in the membranes of bacteria is estimated to be extremely low (40). Based on the Vmax determined in our kinetic studies of Cps2E, S. pneumoniae and E. coli contain approximately 500 to 1,000 molecules of the polyprenyl phosphate acceptor per bacterium. The use of undecaprenyl phosphate as the lipid acceptor for polysaccharide synthesis has been confirmed through mass spectral or nuclear magnetic resonance analysis for only a few polymers. These include S. enterica serovar Newington O antigens (60), enterobacterial common antigen (48), and colanic acid (34) in gram-negative bacteria; peptidoglycan in gram-negative (51) and gram-positive bacteria (26, 27); and teichoic acid in Bacillus licheniformis (55). Many of the capsules of E. coli are also thought to use undecaprenyl phosphate as an acceptor for repeat unit formation, due to the homology of the initiating glycosyltransferase WbaP with the initiating glycosyltransferase involved in O-antigen synthesis (56).
Since the synthesis of several different polysaccharides in bacteria, including essential polymers like peptidoglycan, draws from a limited pool of lipid acceptor, it may be important for cell viability that the lipid acceptor not be sequestered into the repeat units of any one polysaccharide. Yuasa et al. demonstrated that mutations in S. enterica LT2 that impaired synthesis of the side chain of the O-antigen repeat unit and resulted in the accumulation of incomplete repeat units were toxic to the bacterium, likely due to sequestration of undecaprenyl phosphate in O-antigen repeat units at the expense of peptidogycan synthesis (63). Similar toxic effects were observed when certain genes involved in the synthesis of succinoglycan from Sinorhizobium meliloti were mutated (19, 46) as well as when the E. coli enterobacterial common antigen flippase gene, wzxE, was mutated (47). The toxic effect of these mutations was also attributed to the buildup of polyprenyl pyrophosphate-linked intermediates. In peptidoglycan synthesis, the formation of lipid I by MraY is reversible and the lipid accumulates to approximately 700 copies per cell, even in E. coli strains that contain mutations inhibiting the subsequent steps in peptidoglycan synthesis (40, 53). This result suggests that the maximum level at which lipid I can accumulate in the bacterium is limited. The reversibility of the addition of the first sugar to the lipid acceptor in capsule synthesis, as well as the synthesis of all polysaccharides that utilize undecaprenyl phosphate as an acceptor, may be one way in which the cell ensures a constant pool of lipid acceptor. Factors that influence the direction of this reaction may thus be important in determining the ratio of cellular polysaccharides under different environmental conditions.
Present address: Department of Microbiology, University of Pennsylvania, Philadelphia, PA 19104-6076. ![]()
Present address: Wyeth, Pearl River, NY 10965. ![]()
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34. J. Bacteriol. 105:927-936.
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