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Journal of Bacteriology, August 2006, p. 5888-5895, Vol. 188, No. 16
0021-9193/06/$08.00+0 doi:10.1128/JB.00559-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
School of Biology, Georgia Institute of Technology, Atlanta, Georgia 30332
Received 19 April 2006/ Accepted 12 May 2006
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-proteobacterium that is able to lyse a variety of other bacteria and grow on the nutrients released (7, 21). However, it is best known for its response to nutrient depletion in which growth halts and approximately 105 cells aggregate into fruiting bodies, where cells differentiate into metabolically quiescent spores (4). Predation and development reside on opposite ends of the M. xanthus life cycle, and there is little known about the connection between the two processes, yet they share some common mechanistic ground. There is evidence for both processes utilizing motility, intercellular communication, and of course, information about nutritional status (19). One striking commonality is that both predation and development have been observed to induce rippling motility behaviorthe organization of cells into moving groups that resemble the movement of waves rippling on water (20). The movement of M. xanthus cells on a solid surface is typically observed as a tangled collection of cells moving both individually and in streaming groups. Surface motility occurs through the use of two complementary gliding motility systems. Type IV pilus-based motility is thought to pull cells in a manner similar to the twitching motility of Pseudomonas aeruginosa (14), while a poorly understood slime extrusion mechanism is thought to be able to propel cells forward (8). Both systems require the chemotaxis-like frz pathway to modulate cell reversals and produce directed movement (17, 30). During rippling, cells are organized into nearly parallel lines of high cell density, with troughs of low cell density in between (24). Coordinated movement of cells perpendicular to the axis of the cell line creates the appearance of a traveling wave. However, when cells of neighboring parallel waves come into contact, cell reversals are induced such that the two waves reflect off each other (26). Thus, although cells aggregate into waves during rippling, there is no net cell displacement throughout the swarm, as each wave of cells oscillates between neighboring waves. Directed movement of cells can also be observed during fruiting body formation, but under these circumstances, cells tend to move in the direction of the stream, with net movement into aggregation centers producing the early fruiting body structure (27).
Although rippling has been observed during predation, predatory rippling is rarely mentioned in the literature and rippling has primarily been studied in pure cultures during starvation-induced development. Developmental rippling has been observed to occur spontaneously and sporadically in starving cultures of M. xanthus prior to and concurrent with fruiting body formation (6). Recent experimental and theoretical study of this process indicates that the rippling pattern can be produced through a minimal requirement of cell-cell contacts and an internal biochemical oscillation system (1, 9, 10, 26, 31). Developmental rippling has been proposed to rely on the levels of the starvation-induced C-signal, a 17-kDa form of the CsgA protein (12, 27). The C-signal is thought to be presented on the surface of one cell and to interact with an unidentified receptor on a neighboring cell to transmit the signal (27). The CsgA protein is induced by starving conditions, with CsgA levels rising throughout the developmental process and proposed to induce first rippling and then aggregation and sporulation, all as a function of CsgA concentration (6, 11).
The C-signal model, however, does not sufficiently explain why rippling behavior is observed during predation. Under predatory conditions, M. xanthus cells are digesting the available prey cells and growing on the nutrients released, yet they still demonstrate rippling behavior. It is unknown if predatory rippling behavior requires the starvation-induced C-signal or if it operates via an alternative mechanism. In this study, we demonstrate that rippling behavior is a general mechanism required for efficient predation and that developmental rippling only occurs under conditions which mimic predation, indicating that rippling is solely a predatory behavior in M. xanthus. We conclude that rippling behavior serves to maximize predation efficiency and nutrient scavenging.
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pilA::tet) was kindly provided by D. Zusman (28). Escherichia coli strain ß2155 was used as prey. ß2155 was used for quantitative predation assays, since it is a Kanr diaminopimelic acid (DAP) auxotroph and thus prey cell densities remain relatively constant in any media lacking DAP. For routine culturing, M. xanthus was grown in Casitone yeast extract (CYE) broth, which contains 10 mM morpholinepropanesulfonic acid (MOPS), pH 7.6, 10 g/liter Casitone, 5 g/liter yeast extract, and 8 mM MgSO4. E. coli was cultured in LB broth (23). Kanamycin was supplied when appropriate at 100 µg/ml and DAP at 100 µg/ml. CF agar was utilized for analysis of M. xanthus cells under low nutrient conditions. CF contains 10 mM MOPS, pH 7.6, 1 mM KH2PO4, 8 mM MgSO4, 0.02% (NH4)2SO4, 0.2% citrate, 0.2% pyruvate, and 150 mg/liter Casitone. MMC buffer was used for harvesting and washing of cells and consists of 10 mM MOPS, pH 7.6, 4 mM MgSO4, and 2 mM CaCl2. Saccharomyces cerevisiae strain PJ69-4A (provided by P. James) and Bacillus subtilis strain OI1085 (provided by G. Ordal) were cultured according to standard methods.
Predation assays.
Cultures of M. xanthus and E. coli were harvested at mid-log phase and washed three times in MMC buffer. For qualitative assays, 30% India ink was added to M. xanthus cells for visualization, and M. xanthus and E. coli cells were pipetted 1 mm apart in 2-µl aliquots containing
2 x 107 cells each. For quantitative analysis, cell suspensions were pipetted onto either CF or CYE media in 10-µl aliquots, with
107 M. xanthus cells plated first and allowed to dry, followed by the addition of
109 E. coli cells in 10 µl and incubation at 32°C. To measure the number of E. coli survivors, cells were harvested from plates at the time points indicated and resuspended in MMC buffer. The resuspension was then serially diluted and cells plated on appropriate media to determine the number of CFU. Addition of kanamycin to the media prevents the outgrowth of M. xanthus cells present in the suspension. Three samples were harvested and quantified at each time point. The same procedure was used for the analysis of components which induce rippling, with each substrate that was tested resuspended in both water and in melted agar to a final concentration of 1.5% immediately before plating. Substrates were tested at a concentration of 10 mg/ml. Prey were tested at densities of 108 cells/ml for B. subtilis, 1010 PFU/ml for P1 phage, and 107 cells/ml for S. cerevisiae. Each substrate was tested in the presence of at least three independent cultures.
Microscopy. Rippling behavior was observed using a Nikon SMZ10000 dissecting microscope and a Nikon Eclipse E400 phase-contrast microscope. Images were captured using QImaging camera and software.
Autolysis assays.
Mid-log-phase cultures of M. xanthus cultures were harvested, washed in MMC buffer, and concentrated to
108 cells/ml equivalent. Replicate 1-ml samples of each cell suspension were added to 12-well plates and incubated at 32°C. To quantify the number of intact cells, the suspension was aspirated, transferred to a 1.5-ml tube and sonicated at low power for 3 s to disperse large cell clumps. Direct cell counts were performed using a hemacytometer at the time points described in Results. Three independent cultures of each strain were examined, with three samples analyzed at each time point.
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2 x 107 M. xanthus cells mixed with India ink were pipetted adjacent to
2 x 107 E. coli cells on low-nutrient CF media. As M. xanthus cells colonize the agar surface, the swarm expands in a thin, nonuniform layer of individuals and groups that results in a rough, tangled appearance (Fig. 1A and B). Direct contact of M. xanthus cells with suitable prey bacteria, such as E. coli, results in penetration of the prey colony by M. xanthus cells and subsequent lysis and digestion of the prey. Tangled behavior continues in the leading edge of M. xanthus cells as they migrate through the prey colony, but within 16 to 24 h of the initial contact with prey bacteria, rippling behavior is induced in trailing cells, resulting in aggregations of cells into nearly parallel waves which form perpendicular to the direction of the M. xanthus swarm migration (Fig. 1C and D). Under these conditions, rippling pattern formation is localized solely to the initial area occupied by the prey colony and continues for several days. Areas of the M. xanthus swarm adjacent to the prey locale, but outside of the prey colony, do not display the rippling phenotype at any time (Fig. 1E and F). Note that even as the swarm moves beyond the prey colony, and the nutrients contained therein, cells display tangled rather than rippling behavior. Also, several fruiting body aggregates can be observed forming near the initial M. xanthus inoculum; however, rippling behavior is not observed associated with these fruiting bodies.
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FIG. 1. Predatory behavior of M. xanthus. M. xanthus strain DZ2 cells mixed with India Ink (left) and E. coli cells (right) were pipetted as colonies 1 mm apart on CF medium. The M. xanthus swarm expands from the initial spot in a tangled motility pattern. Lysis of E. coli prey cells occurs as M. xanthus cells make direct contact with the E. coli colony. Expansion of the swarm through the E. coli colony induces rippling motility behavior. Beyond the E. coli colony, the swarm resumes the tangled motility behavior. Pictures were taken at the following time points: 16 h (A and B), 40 h (C and D), and 64 h (E and F). The panels on the left were captured at a magnification of x20. The panels on the right were captured at a magnification of x200 and correspond to the regions marked with rectangles on the left.
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109 cells of ß2155 in the presence of
107 cells of M. xanthus strain DZ2 on CF media results in rapid lysis of prey, with 90% of the E. coli cells lysed in the first 24 h and the E. coli CFU dropping below detectable levels by 48 h (Fig. 2). By comparison, predation occurs much more slowly when the cells are incubated on ripple-inhibiting nutrient rich medium, with >90% of prey cell lysis not observed until 96 h. It should be noted that while viable E. coli cells are not detected after 48 h of incubation on CF in the presence of DZ2, rippling is still observed for at least 72 h beyond this point. This indicates that while live prey bacteria may induce rippling, complete lysis of the available prey bacteria does not correlate with the termination of rippling behavior.
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FIG. 2. Rippling behavior is essential for efficient predation. Replicate 10-µl aliquots containing 109 E. coli prey cells were pipetted onto dried 10 µl spots of 107 M. xanthus cells on either CF or CYE agar. At the times shown, E. coli cells were harvested and the number of E. coli survivors was measured as CFU. The lines represent E. coli only on CF ( ) and CYE ( ), E. coli in the presence of DZ2 on CF () and CYE ( ), and E. coli in the presence of DZ2 pilA mutant on CF ( ) and CYE ( ).
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pilA mutant (DZ4469), which is unable to move by the type IV pilus motility system (32) and also unable to ripple (data not shown), indicates that it is defective in predation at both nutrient levels tested. On CF there are
105 viable E. coli cells remaining after 48 h. After 96 h, E. coli survivors are not detected, indicating that lytic enzymes are still produced in this strain and that the E. coli cells are eventually lysed, but the rate is significantly slower than that of the parent strain. In the presence of high nutrient levels, E. coli lysis by the
pilA strain is indistinguishable from the basal rate of lysis of E. coli cells alone.
Rippling occurs in response to a variety of macromolecular substrates.
The observation of rippling continuing beyond the completion of prey lysis indicates that the substrate(s) which stimulate rippling may still be present. To determine what components of prey are capable of inducing rippling, we plated
107 M. xanthus cells in a 10-µl suspension adjacent to a 10-µl aliquot of the test substrate on CF plates and allowed them to dry. In this assay, heat-killed E. coli cells and the insoluble fraction from lysed E. coli cells are both capable of inducing rippling behavior (Table 1). The soluble E. coli fraction was unable to induce rippling. A previous study by Shimkets and Kaiser demonstrated that M. xanthus rippling behavior is inducible by peptidoglycan extracts from M. xanthus as well as several other proteobacteria and gram-positive bacteria (24). Our data confirms this result, but further testing indicates that several other substrates also serve to induce rippling. We found that in addition to E. coli, B. subtilis, S. cerevisiae and P1 phage are all capable of inducing rippling. While B. subtilis has a peptidoglycan structure similar to that of E. coli, P1 phage and the yeast S. cerevisiae are two biological entities that do not contain peptidoglycan.
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TABLE 1. Analysis of M. xanthus responses to prey cell componentsa
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Developmental rippling is strain dependent. Our analysis of rippling behavior during predation in M. xanthus strain DZ2 indicated that while rippling is readily induced by the presence of prey or prey components, it was not observed at all in our control samples lacking prey (Fig. 3). Other groups have reported that rippling will occur spontaneously on low-nutrient media in the absence of prey; in fact, this "developmental" rippling has been the focus of study on rippling behavior for a number of years (27). The apparent discrepancy may be due to the M. xanthus strain used, as DK1622 is most commonly used during experimental analysis of rippling behavior. The differences between the DK1622 and DZ2 have not been specifically characterized, but the DK1622 strain has undergone significant genetic modification, including the loss and subsequent restoration of both motility systems (2, 3, 29). The DZ2 strain has not been modified from the original isolate other than through culturing for strain propagation (D. Zusman, personal communication). Figure 3 shows that both DZ2 and DK1622 ripple when preying on E. coli, but only DK1622 was observed to ripple in pure culture. Rippling in DK1622 pure cultures is nonuniform, and the direction of wave propagation is unpredictable. The rippling pattern displayed during predation occurs uniformly and predictably for both strains, with the rippling pattern propagating out from the initial M. xanthus inoculum in concentric waves. However, there is still a consistent difference in the rippling pattern displayed by the two strains with DK1622 showing a shorter wavelength than DZ2. The basis for this difference is unknown.
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FIG. 3. Rippling differences observed in wild-type strains DK1622 and DZ2. M. xanthus cells from strains DK1622 and DZ2 were pipetted in the presence and absence of E. coli prey on CF agar and incubated at 32°C for 72 h. (A) DK1622 alone; (B) DZ2 alone; (C) DK1622 with E. coli; (D) DZ2 with E. coli. Although rippling is observed in both M. xanthus strains in the presence of prey E. coli cells, rippling was only observed in the pure cultures of strain DK1622.
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FIG. 4. Lytic differences observed in wild-type strains DK1622 and DZ2. Log-phase cultures of strains DK1622 ( ) and DZ2 () were harvested and washed in MMC buffer. One-milliliter cell suspensions containing 108 cells/ml were added to 12-well plates and incubated at 32°C. Cells were counted directly in a hemacytometer at the times indicated. Due to different levels of cell lysis, 108 cells were added to wells, and the viability was measured through direct cell counts at the times indicated.
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FIG. 5. Effect of dead cells on developmental rippling. Ten-microliter aliquots of M. xanthus cells were pipetted onto CF media as mixtures of live and dead (heat-killed) cells and photographed after 24 h of incubation at 32°C. (A) 10% dead cells; (B) 80% dead cells. Ten-microliter aliquots of live cells were also pipetted separate from but adjacent to the same quantity of dead cell material. (C) 10% dead cells; (D) 80% dead cells. The volume of the dead cell material in each of these aliquots was raised to 10 µl with water.
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-proteobacteria) require direct cell contact and entry into the periplasm of their prey for predation to occur (13), so it is possible that M. xanthus predation functions best when in direct contact with suitable prey. A recent study has shown that colliding rippling waves of M. xanthus cells reflect off each other, causing individual cells to reverse after contact such that any given wave of cells is trapped in an oscillation between neighboring waves. The result is that the entire swarm moves in a coordinated fashion that ensures multiple passages over a given area. The fact that oscillating behavior is induced when M. xanthus cells are located in the area of prey implies that rippling behavior is beneficial for predation. This is supported by the fact that genetic and physiological conditions which inhibit rippling also inhibit efficient predation. We propose a model in which the detection of macromolecules by M. xanthus stimulates the oscillatory behavior of moving cells as a method to ensure that all available growth substrate is consumed.
M. xanthus is a very slow moving bacterium confined to gliding along surfaces, and thus, it has been difficult to demonstrate chemotaxis by M. xanthus cells within a gradient of diffusible chemicals in a manner similar to that displayed by E. coli (5). However, directed movement of M. xanthus cells requires the che1 (frz) chemotaxis-like pathway, and cells carrying mutations in the frz pathway have been shown to exit E. coli prey microcolonies prior to complete lysis of prey (15, 16). This indicates that the Frz chemotaxis homologs are part of the molecular pathway necessary for M. xanthus to properly recognize and modulate cell movement in response to prey. Our observations of M. xanthus predatory behavior indicate that while M. xanthus cells do not appear to be specifically attracted to areas containing prey, cell movements are clearly altered in the presence of prey. It is possible that the ability of a given substance to induce rippling may be the best indication of its suitability as a chemoattractant for this species. Chemotactic movement allows E. coli cells to accumulate in locations supporting optimal growth. For a bacterium that is constrained, as M. xanthus is, to two-dimensional movement and adapted to the digestion of large molecules or prey cells, there is little advantage to a mass accumulation of cells when the growth substrate is nondiffusing. Cells which cannot make direct contact with the growth substrate may not gain any benefit. Thus, the induction of rippling may serve to trap some cells in a nutrient-rich environment while also serving to limit competition. Further examination of the process of rippling will be required to determine how it relates to typical chemotactic mechanisms.
Finally, we also demonstrate that the wild-type M. xanthus strain analyzed is critical for the interpretation of rippling behavior. Although DK1622 and DZ2 are both induced to ripple in the presence of prey, only DK1622 was observed to ripple in pure culture, a response that appears to be dependent on the elevated level of cell lysis detected in this cell line. Even in the presence of prey, rippling features such as wavelength are markedly different between the two strains. The observation of rippling behavior in the presence of nutrients released during predation challenges the idea that rippling behavior is stimulated purely by cell-cell transmission of the starvation-induced C signal. Also, the ability of dead cell material to stimulate rippling in developing colonies of DZ2 indicates that, while it is possible that C signaling is utilized to mediate the response to prey, it seems that both developmental and predatory rippling also require the presence of macromolecular growth substrates. Thus, a deeper understanding of rippling behavior and its requirements depends on a better understanding of the differences between the two M. xanthus wild-type strains and a careful dissection of the responses of this bacterium to the separate stimuli of starvation and predation.
This work was supported by Georgia Tech start up funds and grant AI059682 from the National Institutes of Health to J.R.K.
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