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Journal of Bacteriology, December 2006, p. 8627-8637, Vol. 188, No. 24
0021-9193/06/$08.00+0 doi:10.1128/JB.00978-06
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Institut de Biotecnologia i Biomedicina and Departament de Bioquímica i Biologia Molecular, Universitat Autònoma de Barcelona, 08193 Bellaterra, Barcelona, Spain,1 Department of Microbiology and Immunology, The University of Texas Health Science Center at San Antonio, MC 7758, 7703 Floyd Curl Dr., San Antonio, Texas 78229-39002
Received 5 July 2006/ Accepted 26 September 2006
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M. genitalium and M. pneumoniae are morphologically and serologically related pathogens, sharing both chromosomal organization and sequence identity among their cytadhesin-related genes and proteins (6, 36). In fact, both mycoplasmas have been coisolated occasionally from nasopharyngeal throat swabs of patients with acute respiratory disease (4) and from synovial fluids from patients with arthritis (44, 45). It is thought that M. genitalium adheres to host cells through the P140 adhesin (23), which shows an extensive immunological cross-reactivity with the major M. pneumoniae cytadhesin P1 (25, 26). M. genitalium mutants possessing small amounts of P140 (designated class I mutants) or lacking the P140 protein (designated class II mutants) exhibit a cytadherence-negative phenotype, reinforcing the importance of P140 as a major adhesin (23). Interestingly, these cytadherence-negative mutants appear spontaneously at unexpectedly high rates, but the genetic basis underlying this phenomenon remains to be defined. Concerning gene organization, mg190 or mgpA (encoding a predicted 29-kDa protein), mg191 or mgpB (encoding the P140 protein), and mg192 or mgpC (encoding the P110 protein) are transcriptionally linked and comprise the MgPa operon (27). Some repetitive DNA elements (MgPa islands) containing sequences from the MgPa operon are distributed along the M. genitalium genome (9). Although these MgPa islands do not appear to directly express protein-coding sequences, it has been proposed that recombination between these repetitive DNA elements and the MgPa operon contributes to the antigenic variation of the MgPa proteins (15, 29).
Finally, as stated above, most of the information on cytadherence proteins is derived from studies based on unstable spontaneous mutants, leading to difficulties in their genetic characterization. Although transposons have been revealed as useful tools to isolate and study cytadherence-negative mutants, more precise and accurate data can be obtained from the analysis of mutants obtained by gene replacement. In this study, we have taken advantage of the possibility of deleting target genes by homologous recombination in M. genitalium (8) to obtain mg191 and mg192 deletion mutants. Since all nonadhering M. genitalium mutants isolated lacked both the P140 and P110 proteins (8, 23), we aimed to unravel the striking relationship between these two polypeptides and determine their roles in M. genitalium cytadherence. Here we show that deletion of either the mg191 or mg192 gene yields a noncytadherent phenotype with concomitant loss of the terminal organelle. In addition, detailed analysis of these mutants also reveals a reciprocal posttranslational stabilization between P140 and P110 and downstream events associated with several proteins that comprise the mycoplasma cytoskeleton. Moreover, mg192 and mg191 deletion mutants mimic the protein profiles of spontaneous class I and class II mutants, respectively. Supporting this observation, we have found that the nonadherent phenotype in class I and class II mutants is the consequence of large deletions affecting the mg192 gene and the mg191 and mg192 genes, respectively. These large deletions seem to be the product of recombination events involving DNA repetitive elements and the MgPa operon, and they could be the basis of a general phase variation mechanism switching the adhesion properties of M. genitalium on and off.
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DNA manipulations. (i) Molecular cloning.
General DNA manipulations were performed as described previously (39). Genomic DNA of the WT strain, isolated as previously described (31), was used as a template for PCRs. Primers used in this work are summarized in Table 1. A 1-kb PCR fragment encompassing the upstream region and the first
100 bp of the mg191 gene was obtained by using primers 5'BEKOP140 and 3'BEKOP140. These primers incorporate at their ends Acc65I and EcoRI restriction sites, respectively. Another 1-kb PCR fragment containing the last
100 bp of the mg191 gene and a downstream region was obtained by using primers 5'BDKOP140 and 3'BDKOP140. These primers contained at their ends BamHI and XbaI restriction sites, respectively. Both PCR fragments were cloned into EcoRV-digested pBE (31), excised with the corresponding restriction enzyme (Roche), and ligated together with a 2-kb fragment containing the tetM438 selectable marker (31) and an Acc65I/XbaI-digested pBSKII(+) (Invitrogen). The tetM438 selectable marker was released from plasmid pMTnTetM438 by digestion with EcoRI and BamHI, and this ligation mixture resulted in the creation of p
mg191. Alternatively, a 1-kb PCR fragment containing the upstream region and the first
100 bp of the mg192 gene was obtained by using primers 5'BEKOP110 and 3'BEKOP110. These primers incorporate at their ends the Acc65I and SalI sites, respectively. Otherwise, primer 5'BDKOP110, which includes a BamHI site, and primer 3'BDKOP110, which includes an XbaI site, were used to amplify a 1-kb PCR fragment that comprised the last
100 bp of the mg192 gene, followed by a downstream region. Finally, both PCR fragments digested as described above were ligated with the tetM438 marker released with SalI and BamHI and the Acc65I/XbaI-digested pBSKII(+), creating plasmid p
mg192.
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TABLE 1. Primers
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(ii) Southern blotting.
Genomic DNAs of p
mg191 or p
mg192 transformants were digested with HindIII and BglII, respectively, while genomic DNAs of class I and class II mutants were digested with several enzymes (HindIII, BglII, EcoRI, ScaI, Acc65I, and AvaI) and probed as previously described (31) with fragments S1, S2, and S3 (Fig. 1), which were amplified by PCR using primers 5'SP140 and 3'SP140 (S1), 5'SP140C-t and 3'P140 (S2), and 5'SP110 and 3'SP110 (S3).
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FIG. 1. Homologous recombination at the MgPa operon in M. genitalium. (A and D) Schematic representation of the two possible crossover events of the p mg191 and p mg192 deletion constructs with the MgPa operon. (B and E) mg191 and mg192 genes, respectively, disrupted by double-crossover recombination. (C) mg191 gene disrupted by single-crossover recombination through the downstream flanking region. Hatched boxes represent flanking regions of the mg191 (lines from right to left) and mg192 (lines from left to right) genes in suicide plasmids p mg191 and p mg192, respectively. Black, tetM438 selectable marker; white, mg191 and mg192 genes; lines inside genes, probes S1, S2, and S3. The sizes of fragments resulting from HindIII (H) and BglII (Bg) digestions of the WT and each recombinant mutant DNA are also indicated.
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Electroporation and transformation.
Transformation of M. genitalium strain WT with suicide plasmid p
mg191 or p
mg192 was performed by electroporation as previously described (31), using 30 µg of DNA. For transformation of class I and class II mutants, cells were grown to mid-log phase, centrifuged, and passed five times through a 25-gauge needle. Cells were then electroporated with 5 µg of plasmid pTnTetMG191, pTnTetMG192, or pTnTetMG191-192.
RNA manipulations. RNA was extracted from 20 ml of mid-log phase cultures by using the RNAaqueous kit (Ambion). For reverse transcription-PCR assay, mycoplasma RNAs treated with DNase I (Invitrogen) were reverse transcribed by using the SuperScript first-strand synthesis system (Invitrogen) kit and the 3'BDKOP140 primer. The resulting cDNAs were amplified using primers 5'mg192N-t and 3'BDKOP140, producing a final product that comprises 668 bp of the 5' end of the mg192 gene.
SDS-PAGE, immunoblotting, and matrix-assisted laser desorption ionization-time-of-flight MS analyses. Total mycoplasma cell proteins were prepared for sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electrophoresed on 8% polyacrylamide gels by standard procedures. Gels were stained with Coomassie blue or transferred electrophoretically to nitrocellulose membranes and probed with monoclonal anti-P140 antibody (1:1,000) or polyclonal rabbit antiserum against P110 (1:1,000) as previously described (39). The Coomassie blue-stained protein bands of interest were excised from the acrylamide gel, destained, and trypsin digested, and the eluted peptides were analyzed by matrix-assisted laser desorption ionization-time-of-flight mass spectrometry (MS) as previously described (30).
HA assays. Qualitative hemadsorption activity (HA) assays for mg191 and mg192 mutants and the different class I and class II transformants were performed as previously described (30).
Scanning electron microscopy. Cells were grown to mid-log phase, pelleted by centrifugation, and suspended in SP-4 medium. Cell suspensions were passed three times through a 25-gauge needle to break aggregates and passed through a 0.45-µm low-protein-binding filter before seeding individual wells of 24-well cell culture dishes containing poly-L-lysine-coated glass coverslips (Becton Dickinson). After 2 h of incubation at 37°C under 5% CO2, the medium was removed and the coverslips were washed three times with phosphate-buffered saline and fixed with 1% glutaraldehyde for 1 h. Samples were washed three times with phosphate-buffered saline and then dehydrated sequentially with 30, 50, 70, 90, and 100% ethanol for 10 min each. Immediately, samples were critical point dried (K850 critical point drier; Emitech Ashfort, United Kingdom) and sputter coated with 20 nm of gold. Samples were observed using a Hitachi S-570 (Tokyo, Japan) scanning electron microscope. Proportions of rounded and pleomorphic forms were estimated from digital image analysis of 700 individual cells for each mutant.
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mg191 and p
mg192 and transformation assay.
The M. genitalium mg191 and mg192 genes were deleted by homologous recombination. For this purpose, suicide plasmids p
mg191 and p
mg192 were engineered to contain the tetM438 selectable marker (31) enclosed by the flanking regions of the mg191 or mg192 gene, respectively (Fig. 1A and D). A double-crossover recombination event between plasmid p
mg191 and the mycoplasma genome resulted in the deletion from bases 105 to 4093 of the mg191 gene (92% of the coding sequence). Similarly, plasmid p
mg192 promotes the deletion of base 98 to 3029 of the mg192 gene (92.8% of the coding sequence). Deletions were designed to preserve approximately 100 bp from both ends of the target genes in order to minimize undesired effects in the transcriptional and translational status of the remaining flanking genes. Deleted sequences were replaced by the tetM438 selectable marker, which confers tetracycline resistance to transformed cells. When the M. genitalium WT strain was electroporated with plasmid p
mg191 or p
mg192, transformation efficiencies were 5.5 x 107 and 2.4 x 107 transformants per viable cell, respectively. These values represent a 20-fold increase with respect to those previously reported in studies aimed to knock out target genes from M. genitalium by homologous recombination (7, 8). This increment could be related to the use of the tetM438 selectable marker as we previously described (31) or could reflect an increased recombination frequency in the MgPa locus.
Genomic analyses of p
mg191 and p
mg191 transformants.
Six tetracycline-resistant colonies arising from transformation with p
mg191 and seven from transformation with p
mg192 were picked and propagated in SP-4 medium containing tetracycline. All p
mg192 transformants isolated and three p
mg191 transformants (clones 3, 4, and 6) did not adhere to the cell culture plastic surface and grew aggregated in cell suspension. In contrast, the remaining p
mg191 transformants (clones 1, 2, and 5) grew attached to cell culture flasks. To confirm the absence of the deleted sequences, genomic DNAs from the WT strain and from p
mg191 and p
mg192 transformants were isolated and subjected to Southern blot analyses. Because of the presence in the chromosome of DNA repetitive elements of the MgPa operon, specific probes containing unique sequences were designed to avoid cross-hybridization to multiple parts of the M. genitalium genome. Genomic DNAs from the WT strain and p
mg191 transformants were digested with HindIII and probed with a specific internal fragment of the mg192 gene (probe S3 [Fig. 1]). A single 3.9-kb band was detected for WT DNA, while a 5.6-kb band was detected for all p
mg191 transformants (Fig. 2A). The 5.6-kb band is compatible with either a double-crossover event or a single-crossover event through the 3' mg191 flanking region (Fig. 1B and C). Clones originating from a double-crossover event were detected by reprobing digested DNAs with a specific internal fragment of the mg191 gene (probe S1 [Fig. 1]). A predicted band of 5.6 kb was detected for the WT and clones 1, 2, and 5, indicating a nondisruptive single-crossover event. Otherwise, clones 3, 4, and 6 (designated mg191 mutants) failed to hybridize with probe S1, indicating the presence of the expected deletion in the mg191 gene (Fig. 2B).
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FIG. 2. Southern hybridization profiles of genomic DNAs from the M. genitalium WT strain and p mg191 and p mg192 transformants. A and B) HindIII digestions of genomic DNAs from the WT strain and p mg191 transformants hybridized with probes S3 and S1, respectively. (C and D) BglII digestions of DNAs from the WT strain and p mg192 transformants hybridized with probes S2 and S3, respectively. Probes S1, S2, and S3 are described in Fig. 1.
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mg192 transformants were digested with BglII and probed with a fragment from the 3'end of the mg191 gene (probe S2 [Fig. 1]). A single 3.8-kb band was detected for the WT, while a 4.7-kb band was detected for all p
mg192 transformants (Fig. 2C). The 4.7-kb band is compatible with either a double-crossover event (Fig. 1E) or a single-crossover event through the 5' mg192 flanking region. Finally, clones originating from a double-crossover event were detected by reprobing digested DNAs with a specific internal fragment of the mg192 gene (probe S3). A predicted 1.8-kb band was detected for the WT, while no hybridization was detected for p
mg192 transformants (designated mg192 mutants), indicating that all seven mutants had the expected deletion in the mg192 gene (Fig. 2D). Transcriptional analysis of the mg192 gene in mg191 mutants. Reverse transcription-PCR analysis of two individual mg191 mutants (clones 3 and 4) was performed to rule out transcriptional defects in the mg192 gene as a consequence of the deletion of the mg191 gene. An expected 668-bp product corresponding to an internal fragment of the mg192 gene was amplified, demonstrating the transcriptional integrity of the mg192 gene in mg191 mutants (data not shown).
Analyses of mg191 mutants and mg192 mutants.
Adherence of mg191 and mg192 mutants was qualitatively assessed by their ability to bind erythrocytes. As expected, both mutants exhibited an HA phenotype (Fig. 3A, panels 2 and 3). Transformants were also screened by SDS-PAGE for the absence of the P140 and P110 proteins, and, in accordance with their adhering phenotype on plastic, clones 1, 2, and 5 from p
mg191 transformants showed a WT protein profile (data not shown). Otherwise, the protein profiles from mg191 mutants were clearly different from the WT protein profile (Fig. 3B). As expected, the 140-kDa protein corresponding to the mg191 gene product was completely absent. Surprisingly, we found that the P110 protein was also absent but a new band of approximately 115 kDa was evident. The new band was excised from the gel and digested with trypsin, but MS analysis could not unequivocally assign this band to any M. genitalium protein. Further investigation will be needed to determine the exact nature of the 115-kDa band. The protein profile analysis of mg191 clones revealed other changes that could be clearly assigned. A high-molecular-mass band recently identified by MS as the product of the mg386 gene (30) was markedly reduced. Finally, although some variations in band intensities were observed in other proteins, a protein with an apparent molecular mass of 68 kDa was found to be consistently increased in all mg191 mutants examined (Fig. 3B). That protein was identified by MS as DnaK (MG305). When protein profiles of mg192 mutants were analyzed, the 110-kDa protein corresponding to the mg192 gene product was completely absent, as expected (Fig. 3B). Interestingly, although the 140-kDa protein band was present, its intensity was dramatically reduced. Finally, variations in the levels of the MG386 and DnaK proteins previously observed in the mg191 mutants were also found in the mg192 mutants.
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FIG. 3. (A) Qualitative HA assessment of the different mutants and the WT strain. Panels 1 to 3, WT strain, mg192 mutant (clone 1), and mg191 mutant (clone 3), respectively. Panels 4 to 7, class I mutant, class I mutant plus pTnTetMG192, class I mutant plus pTnTetMG191, and class I mutant plus pTnTetMG191-192, respectively. Panels 8 to 11, class II mutant, class II mutant plus pTnTetMG192, class II mutant plus pTnTetMG191, and class II mutant plus pTnTetMG191-192, respectively. Bar, 100 µm. (B) SDS-8% PAGE protein profiles of the WT strain (lane 1) and the mg192 (clone 1) and mg191 (clone 3) mutants (lanes 2 and 3, respectively). Arrows show the differences observed between WT and mutant strains. *, new 115-kDa band. (C) SDS-8% PAGE protein profiles of the WT strain (lane 1), class I mutant (lane 2), class I mutant plus pTnTetMG191 (lane 3), class I mutant plus pTnTetMG192 (lane 4), class I mutant plus pTnTetMG191-192 (lane 5), class II mutant (lane 6), class II mutant plus pTnTetMG191 (lane 7), class II mutant plus pTnTetMG192 (lane 8), and class II mutant plus pTnTetMG191-192 (lane 9).
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FIG. 4. Western blot analyses of the different mutants and the WT strain. Blots were probed with an anti-P140 monoclonal antibody (A and B) or anti-P110 polyclonal antibody (C and D). In panels A and C, lanes 1 and 2 correspond to class II and class I mutants, respectively. In panels B and D, lanes 1 and 2 correspond to class II and class I mutants transformed with pTnTetMG191-192, respectively. Lanes 3 and 4, class II and class I mutants transformed with pTnTetMG192, respectively; lanes 5 and 6, are class II and class I mutants transformed with pTnTetMG191, respectively; lanes 7 and 8, mg191 mutant clone 4 and mg192 mutant clone 5, respectively; lane 9, WT strain. The arrows in panel B indicate the P140 doublet, while those in panel D indicate the presence of low quantities of P110.
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FIG. 5. Scanning electron microscopy analyses of the WT strain (A) and mg191 (B) and mg192 (C) mutants. Thick arrows indicate the terminal organelle, thin arrows show long filaments, and arrowheads show buds. All pictures are shown at the same magnification. Bar, 1 µm.
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TABLE 2. Summary of phenotypes of the mg191 and mg192 mutants
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Genetic basis of class I and class II mutants.
We were unable to amplify by PCR either the mg192 gene from the class I mutant or the mg191 and mg192 genes from the class II mutant, even using alternative primers, suggesting the presence of deletions in these mutants. To map these possible deletions in both mutants, Southern blot analyses were performed using several restriction enzymes and probes S1 and S2 (Fig. 1). The Southern blots (data not shown) revealed the presence of a
4-kb deletion close to the AvaI site of the mg191 gene in the class I mutant and a
6-kb deletion close to the ScaI site at the 5' end of the mg192 gene in the class II mutant (Fig. 6A). On the basis of the restriction fragment analysis, specific PCR primers were designed to selectively amplify the deletion breakpoint for each mutant. Sequence analyses of the PCR fragments from the class I mutant revealed a deletion within the mg192 gene from base 226524 to 230986 of M. genitalium genome. In a similar way, a deletion from base 224176 to 230169 of M. genitalium genome was found, affecting both the mg191 and mg192 genes in the class II mutant. The breakpoint identified in the class II mutant introduces a premature stop codon in the P140-coding region, which is in agreement with the presence of the 85-kDa truncated polypeptide of P140 detected by Western blotting (Fig. 4A, lane 1). Detailed analysis of the regions around the sequenced breakpoints suggests that these deletions have been generated by a single-recombination event between sequences within the MgPa operon and MgPa island V, which is located immediately downstream of this operon. In particular, in the class I mutant the sequences involved in the rearrangement are boxes R5 and R5', while those in the class II mutant are boxes R3 and R3' (Fig. 6A). The permanent loss of the sequences between the two boxes implicated in each particular single-crossover event was further confirmed by the absence of signal hybridization in Southern blots of class I and class II mutant DNAs with probe S3 (Fig. 6B).
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FIG. 6. (A) Schematic representation of the DNA repetitive elements of the MgPa operon and MgPa island V located immediately downstream (bases 220000 to 234000 of the M. genitalium genome). A single-recombination event between the R5 and R5' boxes and the R3 and R3' boxes may generate class I and class II mutants, respectively. Base coordinates refer to accession number NC_000908 from the NCBI database. Boxes R1 to R6 refer to the DNA repetitive sequences of the MgPa operon, which are also found in the MgPa island (R1' to R6') located immediately downstream. CI, class I mutant; CII, class II mutant. (B) Southern hybridization profiles using probe S3 and genomic DNAs from the WT strain, class I mutant, and class II mutant.
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FIG. 7. Translocation of sequences from the MgPa operon to MgPa islands in the M. genitalium genome. (A) Schematic representation exemplifying how a double-recombination event between the R3-R3' and R5-R5' boxes translocates, in a reversible way, sequences from the MgPa operon (bases 220000 to 230000) to MgPa island VI (bases 310000 to 319000). Boxes R1 to R6 refer to the DNA repetitive sequences of the MgPa operon, which are also found in the MgPa island VI (R1' to R6') located 90 kb downstream. P1 and P2 indicate the position of the 3'P140XbaI and 5'mg260C-t primers, respectively. Base coordinates refer to accession number NC_000908 from the NCBI database. A number of additional double-recombination events are also possible but are not included in the drawing for clarity. (B) PCR amplification from M. genitalium WT and mg191 mutant DNAs, using primers P1 and P2. The 1.5-kb product results from a double-recombination event between R3 and downstream box R4, R5, or R6 of the MgPa operon and the corresponding boxes in the MgPa island VI. M, 1-kb plus DNA ladder marker.
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Protein profile analysis of these mutants reveal that P110 levels are drastically reduced in mg191 mutants, while low levels of P140 and a truncated form of this cytadhesin are detected in mg192 mutant strains. Similar results have been previously reported for M. pneumoniae, where stability of the B (P90) and C (P40) proteins, the counterparts of P110, depends on the presence of P1, the counterpart of P140 (47). However, the converse is not seen, because the B and C proteins seem to be required for the maintenance of P1 in the cytoskeletal fraction (18) but not for P1 stability (47). These functional differences between the B/C and P110 proteins could be a consequence of the different nature of the functional products of the orf6 (M. pneumoniae) and mg192 (M. genitalium) genes. While in M. pneumoniae the 130-kDa polypeptide encoded by the orf6 gene is posttranslationally cleaved to yield two independent proteins, B and C (19), M. genitalium does not undergo such posttranslational modification of its mg192 gene product. In addition, it seems that some but not all synthesis of B or C is dependent on coupling to the translation of P1 (47). In this sense, the dramatically reduced levels of P110 observed in mg191 mutants could be explained by a failure of P110 translation in these mutants. However, despite the likelihood of translational coupling of P110 to P140, our results clearly show that stability of P110 depends almost exclusively on the presence of P140. This is supported by the observation that reintroduction of pTnTetMG192 in the class II mutant does not restore P110 at WT levels. Taken together, our results indicate that the P140 and P110 proteins are reciprocally stabilized in M. genitalium, and they provide an explanation for the previous findings showing the instability of P140 in class I mutants (23).
In addition to the effects on the P140 and P110 proteins, an interesting finding of this work is the observation of increased or decreased levels of additional proteins in mg191 and mg192 mutants. Protein profiles of these mutants show decreased levels of the MG386 protein. MG386 is homologous to P200, a protein found in the Triton X-100 shell of M. pneumoniae (37) that shares common features with other cytadherence accessory proteins (34). Interestingly, we have recently described the involvement of the MG386 protein in M. genitalium gliding motility (30). These observations reinforce the close connection between gliding motility and adherence machineries in motile mycoplasmas (40).
Our results also show increased levels of MG305 (DnaK) protein when P140 or P110 is absent or much reduced. Interestingly, DnaK is a component of the mycoplasma cytoskeleton (37), and it has been described as a protein complexed to the P1 adhesin in M. pneumoniae (20). Up-regulation of DnaK has been also reported after heat shock (48), opening the possibility that loss of P140/P110 proteins and/or the lack of the attachment organelle could initiate a stress signal response in M. genitalium similar to that found after a heat shock. However, since DnaK is associated with the cytoskeleton and is a member of the actin superfamily proteins with potential polymerization activity, additional cytoskeleton-related roles for DnaK have been suggested (30, 37). Thus, we cannot exclude the possibility that DnaK is up-regulated as a consequence of possible cytoskeletal rearrangements after the loss of the terminal organelle. At the same time, the loss of the attachment organelle observed in the rounded and pleomorphic cells from the mg191 and mg192 mutant cells suggests the absolute requirement of both the P140 and P110 proteins for the proper development of such a structure. Studies performed with an M. pneumoniae mutant deficient in the B/C proteins reached similar conclusions (18), despite the fact that neither cell pleomorphism nor long filaments were described. Since duplication of the attachment organelle seems to precede cell division (24), it is reasonable to presume that the absence of the terminal organelle hampers cell division, generating these pleomorphic forms with multiple filaments (38).
In the present study we also aimed to determine the genetic basis of the spontaneous cytadherence-negative class II and class I mutants (23), since their phenotype and proteins profiles resemble those exhibited for the mg191 and mg192 mutants, respectively. From the similarities observed we hypothesized that the mg191 and mg192 genes could be affected in some way in these mutants. Nucleotide sequence analyses of the MgPa operons from the two individual spontaneous mutants revealed the presence of large deletions affecting the mg192 gene in class I mutants and affecting both the mg191 and mg192 genes in class II mutants. In addition, we succeeded in restoring the phenotypes and protein profiles of both mutants after reintroduction of WT copies of the mg192 or mg191-mg192 genes, suggesting the absence of additional changes in other cytadhesin-related genes. The sequence analyses also seem to indicate that these deletions originated from a single-crossover event between the mg191 or mg192 gene and sequences from the MgPa island located immediately downstream of the MgPa operon. The recombinative origin of these deletions provides a plausible explanation for the unexpectedly high rates of appearance of these spontaneous cytadherence-negative mutants. Similar mutation rates are also observed among the spontaneous cytadherence-negative mutants isolated in M. pneumoniae (17, 41) despite the fact that frameshifts but not large deletions have been identified. In addition, by PCR analysis we have also detected the presence of cells harboring these deletions in cultures of the WT strain (data not shown), evidencing the heterogeneity that can be found in a dynamic mycoplasma population.
MgPa islands are found interspersed along the M. genitalium genome, and they seem to contribute to antigenic variation of the major cytadhesin P140 and its operon-related protein P110 via recombination (29). Supporting this hypothesis, recent studies have shown that sequence variation in the mg191 gene occurs in vitro as well in vivo within a single M. genitalium strain (15). Restriction fragment length polymorphism analyses of clinical M. genitalium strains have also revealed DNA sequence divergences at the proximal region of the mg192 gene (28). However, in this study we demonstrate that, in addition to antigenic variation, the repetitive MgPa element located immediately downstream of the MgPa operon could generate irreversible deletions by a looping-out configuration mechanism when a single-crossover recombination event occurs between this repetitive MgPa element and homologous sequences of the mg191 or mg192 gene (Fig. 6). It seems unlikely for a microorganism with an optimized streamlined genome to keep genomic redundancies in a location that can be potentially adverse for the integrity of the MgPa operon. Thus, the recombination system described here, by which P140 and/or P110 is lost, could be assumed to be an irreversible mechanism of phase variation that could provide important advantages to the whole mycoplasma population (12, 46). For example, since the P140 and P110 proteins are considered the most immunological proteins of M. genitalium (2, 42), the lost of these cytadhesins could contribute both to evasion of the host defense mechanisms and to the infection perseverance of M. genitalium. Such permanent losses of genetic material are not uncommon in mycoplasmas. It is known, for example, that one of the consequences of the formation of chimeric vsp genes in Mycoplasma bovis is the irreversible lost of coding sequences (22). Alternatively, reversible phase variation in the Mycoplasma gallisepticum gapA gene (homologous to mg191) has been described, providing variable adhesive properties to this avian pathogen and promoting the consecutive colonization of either several hosts or various niches within a single host (49). In this study, we show translocation of MgPa sequences via recombination to a particular MgPa island. Based on these observations, we propose the existence of a reversible mechanism to switch on and off the expression of the M. genitalium P140 and P110 cytadhesins, based on a double-recombination event involving sequences from two different boxes of a given MgPa island and the corresponding homologues from the MgPa operon (Fig. 7A). Although it remains to be determined whether these phenomena take place in the course of natural infection, these rearrangements as seen from the population point of view could provide important advantages in tissue colonization and perseverance to this human pathogen.
Collectively, the results presented in this study support previous data and provide new insights into the relationships between the cytoskeleton and the P140 and P110 proteins, as well their roles in the M. genitalium cytadherence. Finally, we show experimental data demonstrating the high genome dynamism of this minimal microorganism.
We thank the staff of Servei de Microscòpia (UAB) for processing scanning electron microscopy samples.
Published ahead of print on 6 October 2006. ![]()
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