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Journal of Bacteriology, April 2006, p. 2427-2434, Vol. 188, No. 7
0021-9193/06/$08.00+0 doi:10.1128/JB.188.7.2427-2434.2006
Copyright © 2006, American Society for Microbiology. All Rights Reserved.
Brenda Allan,2 and
Christine M. Szymanski1*
Institute for Biological Sciences, National Research Council of Canada, 100 Sussex Dr., Ottawa, Ontario K1A 0R6, Canada,1 Vaccine and Infectious Disease Organization, 120 Veterinary Rd., Saskatoon, Saskatchewan S7N 5E3, Canada2
Received 15 November 2005/ Accepted 10 January 2006
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C. jejuni synthesizes a conserved heptasaccharide with the structure GalNAc-
1,4-GalNAc-
1,4-[Glcß1,3]-GalNAc-
1,4-GalNAc-
1,4-GalNAc-
1,3-Bac-ß1, where Bac is bacillosamine (2,4-diacetamido-2,4,6-trideoxyglucopyranose) (33). Similar to eukaryotes, the glycan is attached to multiple proteins via an N linkage to the Asn residue of the Asn-Xaa-Ser/Thr motif (29, 33), where Xaa can be any amino acid except proline (18). Unlike eukaryotes however, the precise function(s) of the glycan modification in C. jejuni is unknown, but loss of the heptasaccharide leads to changes in protein antigenicity, loss of type IV protein complex assembly and DNA uptake, reduction in adherence and invasion in vitro, and loss of colonization in mice and chickens in vivo (13, 20, 21, 25).
The genes involved in the synthesis and transfer of the heptasaccharide are found clustered together in the pgl (for protein glycosylation) locus (Fig. 1) and can be functionally transferred into Escherichia coli (29). The locus is conserved in gene content and organization throughout the Campylobacter genus (24), with the exception of wlaJ, which is present in approximately half of all C. jejuni strains. Recent analyses of the gene content from the genome-sequenced strains of Wolinella succinogenes and Desulfovibrio desulfuricans have identified genes with significant identity to those in the campylobacter pgl locus, including the gene encoding the oligosaccharide transferase, PglB, required for N-linked protein glycosylation. PglB, the homolog of the eukaryotic Stt3p, contains the WWDYG catalytic domain that is conserved in all three domains of life and is essential for N-linked protein glycosylation (29, 31). Thus, although it has not yet been confirmed structurally, it is likely these organisms also synthesize N-linked glycans.
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FIG. 1. Schematic of the pgl locus and proposed N-glycan pathway. (Top) C. jejuni NCTC 11168 gene cluster, cj1119c-cj1131c, examined in this study. Gray arrowheads indicate genes that do not appear to be involved in N-glycan biosynthesis. Note that galE (1) and wlaB (this work) have been renamed gne and pglK, respectively. (Bottom) N-glycan biosynthesis in C. jejuni proceeds through assembly of glycan on the lipid anchor, undecaprenyl pyrophosphate (6). The glycan is synthesized as a block before being added to proteins at select Asn-X-Ser/Thr motifs.
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In this study, we examine the biosynthesis of C. jejuni N-linked glycans in vivo using high-resolution magic angle spinning nuclear magnetic resonance (HR-MAS NMR) (23) and have applied this method to quantitate the glycosylation efficiency within the cells. To confirm the NMR findings, protein extracts from the C. jejuni glycosylation mutants were tested for their reactivity with the lectin soybean agglutinin (SBA), recognizing terminal GalNAc residues; specific glycoproteins were examined by mass spectrometry (MS). Furthermore, based on previous observations that disruption of the C. jejuni N-linked pathway results in loss of chicken colonization, we screened our mutants with the chicken model to validate our findings and determined the minimum glycan structure required for C. jejuni colonization of its natural commensal host.
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Construction and characterization of C. jejuni site-specific mutations. We have previously described the construction of the pglB (33), pglH (21), and gne (1) mutants, while pglA, pglD, pglE, and pglJ mutants were kindly provided by B. Wren (14). For construction of the kpsM::Cm mutant, a 2,420-bp fragment (kpsE-Cj1450) containing the kpsM gene was amplified using kpsM-F2 and kpsM-R2 (see Table 1 for primer sequences) and constructed as previously described (33); the Cm resistance cassette from pRY109 was inserted (32) into the unique BseRI restriction site of kpsM. For the pglF::Km mutant, a 5,151-bp fragment (prmA-pglE) was amplified using prmAF and 1121R. A Km cassette from pILL600 (12) was cloned into the unique XbaI restriction site of pglF. For the pglG::Km mutant, a 1,825-bp fragment (cheY-pglF) was amplified using pglG-F2 and pglG-R2, and the Km cassette was cloned into the unique NdeI site of pglG. For the pglI::Km mutant, a 3,026-bp fragment (pglJ-pglH) was amplified using 1127F and 1129R, and the Km cassette was cloned into the unique PflMI site of pglI. For the wlaB::Km mutant, a 4,408-bp fragment (pglH-wlaA) was amplified using wlaBgalE-F1 and wlaBgalE-R1, and the Km cassette was cloned into the unique AfeI site of wlaB. All the C. jejuni antibiotic-resistant transformants were characterized by PCR to confirm that the incoming plasmid DNA had integrated by a double-crossover event. The orientation of the Km cassettes in the glycan mutants was confirmed to be nonpolar by sequencing with the ckanB primer; microarray analyses also demonstrated that expression of the downstream genes was not affected by mutagenesis (results not shown). To clearly observe the N-linked glycan resonances by HR-MAS NMR, all Km-containing mutants were introduced into the kpsM::Cm background to eliminate resonances due to capsular polysaccharide (23). All double mutants were confirmed and characterized by NMR.
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TABLE 1. Primer sequences used for mutant construction and verification
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-1,3-GalNAc peak at 5.24 ppm often had a broad underlying peak for the pgl+/kpsM-negative spectra, the anomeric peaks at 5.14 to 5.04 ppm (i.e., five anomeric protons: b, c, d, e, and f of the N-glycan) (Fig. 2 inset) were integrated. For the pglI-negative/kpsM-negative mutant, the peak at
5.14 ppm was broad and of poor S/N; as a result, integration was based on resonances at 5.08 ppm and 5.04 ppm (i.e., four anomeric protons: c, d, e, and f of the N-glycan). For comparison of the pgl+/kpsM-negative and pglI-negative/kpsM-negative results, the pglI-negative integrals were normalized to five protons by scaling the integrals by 5/4. In addition to the use of the TSP external reference, the N-glycan integrals were referenced against two C. jejuni peaks at 8.28 ppm and 8.62 ppm, which are invariant cell-related resonances (the identity of these peaks has not been determined).
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FIG. 2. 1H HR-MAS NMR of C. jejuni NCTC 11168 double mutants. The anomeric region of each indicated mutant in a kpsM-negative background is shown, along with the proposed protein function in sequential biosynthetic order. (Inset) Structure of the N-linked heptasaccharide along with the anomeric 1H NMR spectrum of purified glycan from the wild type for comparison (33). This spectrum is similar to those observed for the wild type and kpsM-negative whole cells (23). Note that the Glc anomeric region is not shown for the mutants because this resonance is difficult to distinguish in whole-cell spectra.
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Purification and analysis of Peb3. The Peb3 glycoprotein was isolated from C. jejuni by cation exchange chromatography as described previously (33) with the following modifications. A 1-liter overnight culture was harvested and resuspended in 50 mM HEPES, pH 9.0, and disrupted using the EmulsiFlex (Avestin, Inc.). The lysate was applied to a HiPrep 16/10 SP FF column on an ÅKTA FPLC system (Amersham Biosciences). The column eluate was monitored for UV absorbance at 280 nm, and fractions were examined by SDS-PAGE using Mini Protean II slab gels (Bio-Rad Laboratories). Fractions containing Peb3 were combined, dialyzed, and freeze-dried before further purification using a Mono S HR 5/5 column as previously described (33). The intact mass analysis of Peb3 was determined by electrospray ionization mass spectrometry (ESI-MS) using a Q-TOF2 hybrid quadrupole time of flight mass spectrometer (Waters). The protein solutions were adjusted to 25% methanol-0.5% acetic acid prior to infusion at a flow rate of 1 µl/min. Mass spectra were acquired for approximately 1 min over the range m/z 600 to 2,000.
Analysis of eluted glycoproteins from SDS-PAGE by mass spectrometry.
Glycopeptide analysis was done as previously described (33). Briefly, overnight cultures were disrupted with the EmulsiFlex (Avestin). Glycoproteins were then enriched by affinity chromatography with SBA lectin agarose (Sigma). The appropriate fractions were pooled and separated by SDS-PAGE and stained with colloidal Coomassie blue. Glycoprotein bands were excised, destained, and in-gel digested with modified trypsin (Promega) according to standard protocols (33). The peptide extracts were then analyzed by nanoHPLC-electrospray tandem mass spectrometry (nanoLC-MS/MS) using the Q-TOF2 spectrometer. Approximately one-third of each extract was injected onto a 0.3- by 5-mm C18 Micro-Precolumn cartridge (Dionex/LC-Packings), which was then brought online with a 75-µm by 50-mm Picofrit nanocolumn (New Objective) packed with BioBasic C18 reversed-phase medium. The peptides were separated using a gradient supplied by a Waters CapLC pump (5 to 80% acetonitrile-0.2% formic acid in 50 min,
300-nl/min flow rate). The mass spectrometer was set to automatically acquire MS/MS spectra on double-, triple-, and quadruple-charged ions. Database searching was carried out in batch mode using Mascot Daemon (Matrix Science) against the NCBInr protein sequence database, as well as the C. jejuni NCTC 11168 genome sequence database. Glycopeptide MS/MS spectra were identified manually by the presence of the strong oxonium ions at m/z 204.1 and 407.2, corresponding to [HexNAc]+ and [HexNAc2]+, respectively.
Colonization of 1-day-old chicks. One-day-old chicks, in groups of 20, were challenged with C. jejuni wild-type and select mutants as described previously (4). Motility was measured for all strains in duplicate using 0.4% Mueller-Hinton agar plates to ensure that changes in colonization were not due to alterations in flagellar expression (4). Inocula for the challenge experiments were produced by harvesting cells grown for 18 h into cold 0.85% (wt/vol) NaCl, diluted to the indicated concentration in saline, and maintained on ice until used. Birds were maintained for 7 days after challenge and then euthanized by cervical dislocation according to the approved guidelines of the Canadian Council for Animal Care. Ceca were collected, and the contents were removed and weighed. To determine the level of colonization, serial dilutions of the cecal contents were made using normal saline and were plated on selective Karmali agar (Bacto). For statistical analysis of the data, which were not normally distributed, the levels of colonization were transformed by ranking. A one-way analysis of variance test for significance of differences among the groups was done. If there was a significant difference among the groups, the means of the ranked data were compared using Tukey's multiple-comparison test.
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-1,3-GalNAc resonance from the spectra. However, as several anomeric resonances from the capsular polysaccharide overlap with the N-glycan resonances in the HR-MAS NMR spectra from NCTC 11168, we constructed all 12 mutants (including pglB and gne) in a capsule minus (kpsM mutant) background to enable unambiguous interpretation. When examined by HR-MAS NMR, the majority of double pgl/kpsM C. jejuni mutants were missing N-glycan resonances (Fig. 2). These strains included pglB/kpsM and gne/kpsM, as was predicted from previous experiments; pglD/kpsM, pglE/kpsM, and pglF/kpsM (Bac biosynthesis mutants); pglA/kpsM, pglH/kpsM, and pglJkpsM (GalNAc transferase mutants); and pglK/kpsM (putative inner-membrane transport mutant). In contrast, the glycan produced by pglG/kpsM appeared to be identical to the wild type. This gene flanks the pgl locus (Fig. 1), but its function is currently unknown.
Interestingly, the Glc transferase mutant pglI/kpsM was still able to synthesize a glycan. The HR-MAS NMR spectra from this strain exhibited chemical shifts similar to those of the wild-type resonances (Fig. 2, inset) (23) but with altered stoichiometry, which integration has confirmed reflects a shift in the position of resonance c to overlap with resonance d. Integration of the N-glycan anomeric resonances relative to that of the external TSP standard allowed estimation of the relative amount of glycan expressed in the pgl+/kpsM-negative and pglI-negative/kpsM-negative C. jejuni mutants. Based upon triplicate analyses of each mutant, the amount of glycan present was found to be 2.33% ± 0.42% and 2.47% ± 0.31% (expressed as a percentage of the TSP resonance integral) for the pgl+/kpsM-negative and pglI-negative/kpsM-negative mutants, respectively. Comparison of the N-glycan integrals with two invariant C. jejuni resonances as internal standards also yielded similar results (not shown). The errors in our analyses in vivo were consistent with results reported for quantitative solution 1H NMR and with the difficulty in obtaining accurate measurements with dilute solutions or impure compounds (3). Thus, in vivo quantitative HR-MAS NMR demonstrates that deletion of Glc transferase activity encoded by pglI does not significantly alter glycan expression.
Lectin reactivity of the pgl mutants. The terminal GalNAc residue of the N-linked glycan binds to the SBA lectin (14). To corroborate the HR-MAS NMR results, proteins from whole-cell lysates of all the mutants were separated by SDS-PAGE, transferred to a polyvinylidene difluoride membrane, and probed with SBA (Fig. 3). Consistent with the HR-MAS NMR data, the pglG-negative and pglI-negative protein extracts reacted with SBA at a level similar to that of the wild type, indicating the proteins were glycosylated in these mutants. Similarly, the other pgl mutants showed very little reactivity with SBA, confirming that the glycosylation pathway had been disrupted. In contrast, the pglD mutant showed an intermediate level of reactivity with SBA.
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FIG. 3. C. jejuni NCTC 11168 whole-cell lysate reactivity with the SBA lectin. The masses (in kilodaltons) are indicated on the right.
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The mass spectra from the wild-type, pglK-negative, and pglG-negative strains are shown in Fig. 4. The reconstructed mass profiles derived from these spectra are provided in the insets. All the examined strains contained unmodified Peb3 (25,454 Da) and Peb4 (28,376 Da). However, glycosylated Peb3 (26,861 Da) was only observed in the mass profiles from the wild type and the pglG mutant and not from the pglB-, pglD-, pglE-, pglH-, and pglI-negative strain Peb3 fractions (data not shown).
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FIG. 4. ESI-MS analysis of combined Peb3-containing fractions from cation-exchange chromatography: wild-type C. jejuni NCTC 11168 (A), the pglK mutant (B), and pglG mutant (C). The reconstructed molecular mass profiles are presented in the insets. The protein peak at 26,861 Da is glycosylated Peb3.
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FIG. 5. NanoLC-MS/MS analysis of the tryptic glycopeptide (T327-388) from the secreted transglycolase (Cj0843c) isolated from wild-type C. jejuni NCTC 11168 (A) and the pglI mutant (B). Presented here are the product ion spectra of the doubly protonated wild-type glycopeptide ion at m/z 1325.6 (A) and the corresponding pglI-negative glycopeptide ion at m/z 1244.5 (B). The peptide sequence and the glycan composition are displayed in the insets. The major fragment ions observed in both spectra are either glycan oxonium ions (low m/z region) or are due to sequential loss of the oligosaccharide residues (upper m/z region). Only the glycopeptide containing the complete heptasaccharide structure was observed in the digest of wild-type transglycolase, and it was never detected in the corresponding pglI mutant digest. The reverse was true with respect to the glycopeptide lacking the hexose moiety.
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FIG. 6. Colonization of 1-day-old chicks by C. jejuni NCTC 11168 and indicated mutants. The bar represents the median level of colonization for each group. The sensitivity level of the assay is as low as 40 CFU of C. jejuni per gram of cecal material.
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pglI mutation causes loss of the glucose branch, confirming that this gene encodes the glucosyltransferase (8, 15). Interestingly, the oligosaccharide transferred in the pglI mutant contains the entire 6-mer, demonstrating that Glc plays no role in determining the length of the GalNAc backbone. HR-MAS NMR measurement of protein glycosylation efficiency demonstrated that rates of protein modification were not altered significantly in this mutant, and this was supported by observations of similar levels of chick colonization in vivo and protein reactivity with SBA. However, the observation that Peb3 was not modified in the pglI mutant suggests that there are minor differences which need further investigation. For example, we previously demonstrated that only 50% of Peb3 was glycosylated with a single heptasaccharide in the wild-type background, so N-linked modification of this protein may be inefficient (33). In addition, the SBA protein reactivity pattern in the pglI mutant differs slightly from the wild type, with one band missing in the same mass range (27 kDa) as glycosylated Peb3 (Fig. 3). In yeast and higher eukaryotes, loss of glucose results in reduced rates of glycan transfer to protein both in vitro and in vivo (2, 26, 27). Following transfer, removal of Glc is critical for protein quality control in the endoplasmic reticulum to mediate correct protein folding and glycan processing to the complex structures found in these organisms (19). Since there is no further processing of the N-linked glycan in C. jejuni, it is not surprising that the Glc is not essential in the bacterial pathway; recently, genome sequencing demonstrated that another Campylobacter species was missing the Glc transferase homolog in its pgl gene cluster (7, 24).
Loss of N-linked glycan detection by NMR, mass spectrometry, and SBA reactivity, in combination with loss of chick colonization, demonstrated for the first time that the putative ABC transporter, WlaB, is involved in N-linked protein glycosylation in C. jejuni. We propose to renaming WlaB as PglK to reflect these observations. Future studies will determine whether PglK indeed provides the energy to transfer the glycan across the inner membrane. It will also be interesting to establish whether recognition of the glycan block exists at this stage of the pathway, since reports have demonstrated that PglB has relaxed specificity and is capable of adding incomplete glycans, and even foreign O antigens, to protein when expressed in E. coli (6, 15). Our results describing protein modification with the complete N-linked heptasaccharide in its native host are in contrast to the results described by Linton et al., where incompletely assembled oligosaccharides were added to protein when the system was transferred into E. coli (15). Since inactivation of C. jejuni WlaB (PglK) in E. coli did not affect protein glycosylation, it is possible that a promiscuous E. coli enzyme (such as Wzx) (5, 17) is compensating and providing incomplete glycans to be added through the action of PglB. To support this argument, examples for cross talk between the E. coli system and the C. jejuni glycosylation machinery have already been demonstrated, i.e., E. coli WecA compensation for C. jejuni PglC (15) and HexNAc occasionally replacing Bac (29) in recombinant glycoproteins expressed in E. coli.
During the process of assembling preformed glycans for block transfer, interference at any stage of glycan synthesis will result in the loss of glycoconjugate formation. In this study, we demonstrate that disruption of the enzymes involved in biosynthesis, transport, and transfer of the hexasaccharide backbone was essential for N-glycan addition and for chick colonization, while removal of the Glc branch showed very little effect. Thus, the initial steps for N-linked protein glycosylation involving the synthesis, flipping, and addition of the preformed oligosaccharides en bloc to select motifs on the nascent protein have been evolutionarily conserved between bacteria and eukaryotes (16). Similarly, it was recently demonstrated that the process of protein O mannosylation is also conserved between bacteria and eukaryotes (28). Furthermore, we show that under the conditions examined, PglG plays no role in glycan biosynthesis, PglI is the glucosyltransferase, and the putative ABC transporter, WlaB (renamed PglK) is required for N-glycan formation. HR-MAS NMR is a nondestructive technique that for the first time allowed efficient tracking and quantitation of the N-linked protein glycosylation pathway in vivo. Further characterization of this pathway in the native host will not only provide details describing the coordinated reactions and regulation of the pathway in bacteria and higher organisms but will also provide a wealth of information on optimizing the system for efficient glycoengineering in foreign hosts such as E. coli.
Funding for this work has been provided to J.K., H.J., and C.M.S. through the National Research Council Genomics and Health Initiative and to B.A. through the Alberta Poultry Producers and the OMAF Food Safety Research Program.
Present address: Department of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario N1G 2W1, Canada. ![]()
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