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Journal of Bacteriology, December 2008, p. 7918-7924, Vol. 190, No. 24
0021-9193/08/$08.00+0 doi:10.1128/JB.00911-08
Copyright © 2008, American Society for Microbiology. All Rights Reserved.
The Mycobacterium avium Complex gtfTB Gene Encodes a Glucosyltransferase Required for the Biosynthesis of Serovar 8-Specific Glycopeptidolipid
Yuji Miyamoto,1*
Tetsu Mukai,1
Yumi Maeda,1
Masanori Kai,1
Takashi Naka,2
Ikuya Yano,2 and
Masahiko Makino1
Department of Microbiology, Leprosy Research Center, National Institute of Infectious Diseases, 4-2-1 Aobacho, Higashimurayama, Tokyo 189-0002, Japan,1
Japan BCG Central Laboratory, 3-1-5 Matsuyama, Kiyose, Tokyo 204-0022, Japan2
Received 2 July 2008/
Accepted 29 September 2008

ABSTRACT
Mycobacterium avium complex (MAC) is one of the most common
opportunistic pathogens widely distributed in the natural environment.
The 28 serovars of MAC are defined by variable oligosaccharide
portions of glycopeptidolipids (GPLs) that are abundant on the
surface of the cell envelope. These GPLs are also known to contribute
to the virulence of MAC. Serovar 8 is one of the dominant serovars
isolated from AIDS patients, but the biosynthesis of serovar
8-specific GPL remains unknown. To clarify this, we compared
gene clusters involved in the biosynthesis of several serovar-specific
GPLs and identified the genomic region predicted to be responsible
for GPL biosynthesis in a serovar 8 strain. Sequencing of this
region revealed the presence of four open reading frames, three
unnamed genes and
gtfTB, the function of which has not been
elucidated. The simultaneous expression of
gtfTB and two downstream
genes in a recombinant
Mycobacterium smegmatis strain genetically
modified to produce serovar 1-specific GPL resulted in the appearance
of 4,6-
O-(1-carboxyethylidene)-3-
O-methyl-glucose, which is
unique to serovar 8-specific GPL, suggesting that these three
genes participate in its biosynthesis. Furthermore, functional
analyses of
gtfTB indicated that it encodes a glucosyltransferase
that transfers a glucose residue via 1

3 linkage to a rhamnose
residue of serovar 1-specific GPL, which is critical to the
formation of the oligosaccharide portion of serovar 8-specific
GPL. Our findings might provide a clue to understanding the
biosynthetic regulation that modulates the biological functions
of GPLs in MAC.

INTRODUCTION
Mycobacteria are pathogens that cause diseases such as tuberculosis
and leprosy. In addition, nontuberculous mycobacteria, which
are widely distributed in the natural environment, cause opportunistic
pulmonary infections resembling tuberculosis. These mycobacteria
are distinguished by a multilayered cell envelope consisting
of peptidoglycan, mycolyl arabinogalactan, and surface glycolipids
(
9,
13). The surface glycolipids are abundant and structurally
different, and they may act as a barrier to immune responses
(
9,
13). Glycopeptidolipids (GPLs) are major glycolipid components
present on the surface of several species of nontuberculous
mycobacteria (
40). All of these GPLs have a conserved core structure
that is composed of a fatty acyl tetrapeptide glycosylated with
6-deoxytalose (6-d-Tal) and
O-methyl-rhamnose (O-Me-Rha) and
are termed non-serovar-specific GPLs (nsGPLs) (
2,
4,
14). On
the other hand, the GPLs of
Mycobacterium avium complex (MAC),
nontuberculous mycobacteria consisting principally of two species,
M.
avium and
M.
intracellulare, have various haptenic oligosaccharides
linked to the 6-d-Tal residue of nsGPLs, resulting in serovar-specific
GPLs (ssGPLs) (
2,
4,
40). The oligosaccharide portions of ssGPLs
define MAC serovars that are classified into 28 types. The serovar
1-specific GPL, with Rha linked to the 6-d-Tal residue, is the
basic oligosaccharide unit of all ssGPLs (
11). The Rha residue
of serovar 1-specific GPL is further extended by various glycosylation
steps, such as rhamnosylation, fucosylation, and glucosylation
(
11). These glycosylation steps generate structural diversity
in GPLs of MAC (
11). However, because of their complexity, most
of the biosynthetic pathways for ssGPLs have not been fully
determined. We recently showed that the biosynthesis of nsGPLs
was regulated by a combination of glycosyltransferases (
31).
Therefore, each glycosyltransferase might mediate a specific
step in the biosynthesis of ssGPLs.
In terms of biological activity, it has been reported that the properties of ssGPLs are notably different from each other and that some of the properties play a role in affecting host responses to MAC infections (3, 5, 21, 27, 37, 38). Moreover, epidemiological studies have shown that serovars 1, 4, and 8 are distributed predominantly in North America and are also frequently isolated from AIDS patients (24, 39, 41). However, in contrast to other ssGPLs, the serovar 8-specific GPL is reported to be able to induce altered immune responses (3, 21). The biosynthetic pathway for serovar 8-specific GPL, particularly its oligosaccharide portion that includes a unique 4,6-O-(1-carboxyethylidene)-3-O-methyl-glucose (Glc) residue (7, 8) that may determine the specificity of serovar 8, remains unknown (Table 1). In this study, we investigated the genomic region assumed to be associated with the biosynthesis of GPL in MAC serovar 8 strain and identified the genes involved in the glycosylation pathway leading to the formation of serovar 8-specific GPL.

MATERIALS AND METHODS
Bacterial strains, culture conditions, and DNA manipulation.
Table
2 shows the bacterial strains and vectors used in this
study. MAC strains were grown in Middlebrook 7H9 broth (Difco)
with 0.05% Tween 80 supplemented with 10% Middlebrook ADC enrichment
(BBL). Recombinant
M. smegmatis strains used for GPL production
were cultured in Luria-Bertani broth with 0.2% Tween 80. Isolation
of DNA and transformation of
M. smegmatis strains were performed
as previously described (
32). The genomic regions of MAC strains
were amplified by a two-step PCR using TaKaRa
LA Taq with GC
buffer and the following program: denaturation at 98°C for
20 s and annealing-extension at 68°C for an appropriate
time depending on the length of the targeted region.
Escherichia coli strain DH5

was used for routine manipulation and propagation
of plasmid DNA. When necessary, antibiotics were added as follows:
kanamycin, 50 µg/ml for
E. coli and 25 µg/ml for
M. smegmatis; and hygromycin B, 150 µg/ml for
E. coli and 75 µg/ml for
M. smegmatis. Oligonucleotide primers
used in this study are listed in Table
3.
Construction of expression vectors.
The
rtfA gene was amplified from genomic DNA of
M.
avium strain
JATA51-01 using primers RTFA-S and RTFA-A. The PCR products
were digested with each restriction enzyme and cloned into the
BamHI-PstI site of pMV261 to obtain pMV-rtfA. To use the site-specific
integrating mycobacterial vector more conveniently, we constructed
pYM301a containing an AflII site in pYM301. The region encompassing
gtfTB, ORF3, and ORF4 was amplified from genomic DNA of MAC
serovar 8 strain ATCC 35771 using primers GTFTB-S and ORF4-A.
In addition,
gtfTB was amplified using primers GTFTB-S and GTFTB-A.
The PCR products were digested with each restriction enzyme
and cloned into the PstI-EcoRI site of pYM301a to obtain pYM-gtfTB-orf3-orf4
and pYM-gtfTB (Table
2).
Isolation and purification of GPLs.
Harvested bacterial cells were allowed to stand in CHCl3-CH3OH (2:1, vol/vol) for several hours at room temperature. After water was added, total-lipid extracts were obtained from the organic phase and evaporated to dryness. Total-lipid extracts were subjected to mild alkaline hydrolysis as previously described (32, 33) to obtain crude GPL extracts. For analytical thin-layer chromatography (TLC), crude GPLs obtained from the same wet weight of harvested bacterial cells were spotted on Silica Gel 60 plates (Merck) using CHCl3-CH3OH-H2O (30:8:1, vol/vol/vol) as the solvent and were visualized by spraying the plates with 10% H2SO4 and charring. Purified GPLs were prepared from crude GPLs by preparative TLC on the same plates, and each GPL was extracted from the corresponding band. Perdeuteriomethylation was carried out as previously described (6, 12, 17).
GC-MS and MALDI-TOF MS analysis.
Crude and purified GPLs were hydrolyzed in 2 M trifluoroacetic acid (2 h, 120°C), and the released sugars were reduced with NaBD4 and then acetylated with pyridine-acetic anhydride (1:1, vol/vol) at room temperature overnight. The resulting alditol acetates were separated and analyzed by gas chromatography-mass spectrometry (GC-MS) with a TRACE DSQ (Thermo Electron) equipped with an SP-2380 column (Supelco) using helium gas. The following program was used: temperature increased from 52 to 172°C at a rate of 40°C/min and then increased from 172 to 250°C at a rate of 3°C/min. To determine the total mass of the purified GPLs, matrix-assisted laser desorption ionization—time of flight (MALDI-TOF) mass spectra (in the positive mode) were obtained with a QSTAR XL (Applied Biosystems) using a pulse laser with emission at 337 nm. Samples mixed with 2,5-dihydroxybenzoic acid as the matrix were analyzed in the reflectron mode with an accelerating voltage of 20 kV and with operation in positive ion mode.
Nucleotide sequence accession number.
The 4.6-kb genomic region amplified from MAC serovar 8 strain ATCC 35771 using primers GTFB-U4 and DRRC-A has been deposited in the DDBJ nucleotide sequence database under accession number AB437139.

RESULTS
Isolation and sequencing of the 4.6-kb genomic region responsible for GPL biosynthesis in MAC serovar 8.
Lacking information on the genes responsible for biosynthesis
of serovar 8-specific GPL, we compared and analyzed the genomic
regions likely to be responsible for GPL biosynthesis in several
MAC serovars (
16,
28). Most of these regions have high homology
to each other, while the segment between the
gtfB and
drrC genes
was found to vary in the strains. Therefore, we assumed that
this segment contains genes involved in the formation of the
unique Glc residue in serovar 8-specific GPL. To clone the
gtfB-
drrC region by using PCR, we designed various primers containing
sequences derived from other MAC strains. By examining combinations
of several pairs of primers, a 4.6-kb fragment was amplified
from genomic DNA of a MAC serovar 8 strain when primers GTFB-U4
and DRRC-A were used (Fig.
1). Sequencing of this 4.6-kb fragment
revealed four complete open reading frames (Fig.
1). The deduced
amino acid sequences encoded by ORF1, ORF2, ORF3, and ORF4 were
found to be identical to the amino acid sequences of four functionally
undefined proteins from
M.
avium strain 104, MAV_3253, MAV_3255,
MAV_3256, and MAV_3257, respectively (GenBank accession no.
NC_008595.1).
M.
avium strain A5 also possessed a genomic region
harboring ORF2, ORF3, and ORF4 (GenBank accession no. AY130970.1).
These four open reading frames are predicted to encode the following
proteins: ORF1, a putative glycosyltransferase similar to GtfD,
which has been identified as a fucosyltransferase involved in
the biosynthesis of serovar 2-specific GPL (73% identity) (
30);
ORF2, a putative glycosyltransferase, designated GtfTB, showing
high homology to Rv1516c of
M. tuberculosis (61% identity) (
28);
ORF3, a putative polysaccharide pyruvyltransferase similar to
MSMEG_4736 and MSMEG_4737 of
M. smegmatis (61 and 58% identity,
respectively) (GenBank accession no. NC_008596.1); and ORF4,
a putative
O-methyltransferase similar to MSMEG_4739 of
M. smegmatis (55% identity) (GenBank accession no. NC_008596.1).
Identification of the genes required for synthesis of the sugar residue unique to serovar 8-specific GPL.
Based on the deduced functions of the genes in the 4.6-kb fragment,
we focused on
gtfTB (ORF2), ORF3, and ORF4 and characterized
them by performing expression analyses. Because the serovar
8-specific GPL has a structure in which the Rha residue of serovar
1-specific GPL is further glycosylated (Table
1), it was necessary
to prepare a strain producing serovar 1-specific GPL that could
be the substrate for the enzymes participating in the biosynthesis
of serovar 8-specific GPL. For this, as previously demonstrated,
we created a recombinant
M. smegmatis strain, designated MS-S1,
by introducing the plasmid vector pMV-rtfA having the
M.
avium rtfA gene, which converts nsGPLs to serovar 1-specific GPL (
30).
We then introduced the integrative expression vector pYM-gtfTB
possessing
gtfTB into MS-S1 and assessed GPL profiles by performing
a TLC analysis (Fig.
2). By comparison with the profile of MS-S1/pYM301a
(vector control) (Fig.
2, lane A), two new spots, designated
spots GPL-SG-U and -D, were observed in MS-S1/pYM-gtfTB (Fig.
2, lane B), indicating that serovar 1-specific GPL was converted
to structurally different compounds by expression of
gtfTB.
Moreover, when the expression vector pYM-gtfTB-orf3-orf4 containing
gtfTB, ORF3, and ORF4 was introduced into MS-S1, another new
spot, designated GPL-S8, appeared (Fig.
2, lane C), implying
that the structure of GPL-SG-U and -D was further modified by
the products of ORF3 and ORF4. To confirm that these compounds
contain the sugar residues associated with serovar 8-specific
GPL, we performed a GC-MS analysis of the monosaccharides released
from crude GPL extracts of each recombinant strain and the MAC
serovar 8 strain (Fig.
3). The results showed that there was
an excess of Glc, together with Rha, 6-d-Tal, 3,4-di-
O-methyl-Rha,
and 2,3,4-tri-
O-methyl-Rha, in the profile of MS-S1/pYM-gtfTB
compared with other profiles, as well as minor Glc peaks presumably
derived from traces of trehalose-containing glycolipids (Fig.
3B). This indicates that the
gtfTB gene mediates the transfer
of a Glc residue to serovar 1-specific GPL. In contrast, the
profile of MS-S1/pYM-gtfTB-orf3-orf4 revealed the presence of
4,6-
O-(1-carboxyethylidene)-3-
O-methyl-Glc, which was also detected
in the MAC serovar 8 strain (Fig.
3C and D), demonstrating that
the three genes are associated with the formation of the unique
sugar residue of serovar 8-specific GPL.
Functional characterization of gtfTB.
Expression analysis showed that serovar 1-specific GPL was converted
to new compounds containing Glc when the
gtfTB gene was expressed
(Fig.
2, lane B, and Fig.
3B). Although these results suggested
that the product of
gtfTB participates in the formation of a
Glc residue, it is not clear whether
gtfTB encodes the glycosyltransferase
that transfers Glc via 1

3 linkage to the Rha residue of serovar
1-specific GPL, whose linkage was previously detected in serovar
8-specific GPL (
7,
8). To elucidate the function of
gtfTB, we
determined the linkage of sugar moieties of GPL-SG-U and -D,
which were produced by recombinant strain MS-S1/pYM-gtfTB (Fig.
2, lane B). After extraction of the products from the corresponding
bands on the TLC plate, purified GPL-SG-U and -D were subjected
to perdeuteriomethylation followed by GC-MS. The differences
in the TLC profiles of GPL-SG-U and -D might have been due to
the presence or absence of fatty acid methylation, which is
often observed in
M. smegmatis GPLs (
23,
31), whereas the GC-MS
profiles and fragmentation ions for GPL-SG-U and -D were identical,
demonstrating that GPL-SG-U and -D had the same sugar moieties
and linkages. Therefore, the profiles of GPL-SG-U shown here
are representative of GPL-SG-U and -D. The GC-MS profile of
GPL-SG-U contained four peaks corresponding to 6-d-Tal, Rha,
Glc, and 2,3,4-tri-
O-methyl-Rha (data not shown). The characteristic
spectra for Glc, Rha, and 6-d-Tal are shown in Fig.
4. The spectrum
of Glc had fragment ions at
m/z 121, 167, and 168, which represent
the presence of deuteriomethyl groups at positions C-2, C-3,
and C-4 (Fig.
4A). In contrast, fragment ions at
m/z 121, 134,
193, and 240 were detected for Rha, indicating that a deuteriomethyl
group was introduced at positions C-2 and C-4 of Rha, in which
position C-3 was acetylated (Fig.
4B). In addition, detection
of fragment ions at
m/z 134, 181, and 193 (Fig.
4C) revealed
that there was deuteriomethylation at positions C-3 and C-4
in 6-d-Tal. These results demonstrated that position C-1 of
Glc is linked to position C-3 of Rha but not to position C-2
of 6-d-Tal, because it has been determined previously that position
C-1 of Rha is linked to position C-2 of 6-d-Tal in the oligosaccharide
of serovar 1-specific GPL (
17). Accordingly, the oligosaccharide
structures of GPL-SG-U and -D were determined to have Glc-(1

3)-Rha-(1

2)-6-d-Tal
at D-
allo-Thr, demonstrating that
gtfTB encodes the glucosyltransferase
that transfers a Glc residue via 1

3 linkage to the Rha residue
of serovar 1-specific GPL.
Structural assignment of GPL-S8 synthesized by expression of gtfTB, ORF3, and ORF4.
GC-MS of the crude GPL extract from MS-S1/pYM-gtfTB-orf3-orf4
revealed the presence of 4,6-
O-(1-carboxyethylidene)-3-
O-methyl-Glc
(Fig.
3C). To confirm that this structural component was derived
from GPL-S8, we performed GC-MS and MALDI-TOF MS analyses of
purified GPL-S8. The results showed that GPL-S8 contained a
4,6-
O-(1-carboxyethylidene)-3-
O-methyl-Glc residue and two main
pseudomolecular ions (
m/z 1,565.9 and 1,579.8 [M + Na]
+) (data
not shown). Consequently, as shown in Fig.
5, these results
were consistent with the proposed structure for GPL-S8-1 and
-2 containing 4,6-
O-(1-carboxyethylidene)-3-
O-methyl-Glc, with
differences in pseudomolecular ions due to fatty acid methylation.

DISCUSSION
Structural diversity of the ssGPLs, notably in their sugar residues,
defines 28 serovars of MAC. Although these ssGPLs are known
to contribute to the virulence of MAC, the mechanisms of their
biosynthetic regulation are largely unknown. In this study,
we clarified the biosynthetic pathway for serovar 8-specific
GPL, specifically the glycosylation step in which a Glc residue
is transferred to the Rha residue of serovar 1-specific GPL.
To isolate the genomic region associated with the biosynthesis of serovar 8-specific GPL, we compared the GPL biosynthetic gene clusters in several MAC strains and found significant differences in the gtfB-drrC region. The segment flanking the 3' end of the gtfB-drrC region includes several genes responsible for the serovar 1-specific GPL whose structure is found in all ssGPLs. On the other hand, it is experimentally clarified that the gtfB-drrC regions of serovar 2-, 7-, and 16-specific GPL-producing strains contain the genes involved in the formation of the specific sugar residues that are transferred to the Rha residue of serovar 1-specific GPL (18, 19, 30). Thus, this region could play an important role in generating the structural diversity of ssGPLs. As shown in this study, the specific functions for formation of sugar moieties of serovar 8-specific GPL were due to the genes present in the gtfB-drrC region, suggesting that focusing on this region might provide clues for elucidating the characteristics of other ssGPLs whose biosynthesis is still not known.
It has been reported previously that the gtfTB gene in M. avium strains 104 and A5 was not likely to be associated with GPL biosynthesis because its ancestral homologue, Rv1516c (61% identity with the GtfTB gene), was the gene of M. tuberculosis, which produces no GPLs (28). Thus, it was interesting that gtfTB encodes a glycosyltransferase that does participate in GPL biosynthesis in which a Glc residue is transferred to serovar 1-specific GPL, yielding the serovar 8-specific GPL. M. avium strains 104 and A5 synthesize serovar 1-specific GPL as a final product and intermediate, respectively, while it has been recognized that neither of these strains produces serovar 8-specific GPL in spite of the presence of gtfTB in the GPL biosynthetic gene cluster (28). These observations raised the possibility that the transcription of gtfTB is inefficient in both strains due to the upstream sequences. Actually, in M. avium strain 104, a transposase sequence was observed upstream of gtfTB, indicating that this strain might be deficient in glucosylation, and consequently a serovar 1-specific GPL-producing strain is obtained (28). On the other hand, it has been shown that the biosynthetic gene cluster for serovar 7-specific GPL in M. intracellulare strain ATCC 35847 contains a putative glycosyltransferase gene which encodes amino acid sequences that are similar to the amino acid sequences encoded by gtfTB (59% identity) (18). Structural analysis of sugar moieties in serovar 7-specific GPL indicated that this GtfTB homologue may serve as a glycosyltransferase during formation of the terminal amidohexose residue that structurally resembles Glc (18).
The deduced amino acid sequences encoded by ORF3 and ORF4 showed that these genes putatively encode polysaccharide pyruvyltransferase and O-methyltransferase, respectively. Expression of ORF3 and ORF4 together with gtfTB led to structural alterations in which Glc was modified with both 4,6-O-(1-carboxyethylidene) and 3-O-methyl groups. Based on these observations, it is strongly suggested that ORF3 is associated with the formation of the 4,6-O-(1-carboxyethylidene) group that is synonymous with the cyclic pyruvate ketal and that ORF4 is associated with the 3-O-methylation of the Glc residue (Fig. 5). In mycobacteria, homologues of ORF3 and ORF4 were found only in M. smegmatis, as MSMEG_4736 (for ORF3), MSMEG_4737 (for ORF3), and MSMEG_4739 (for ORF4). M. smegmatis also produces glycolipids containing 4,6-O-(1-carboxyethylidene)-3-O-methyl-Glc as a sugar moiety (25, 34), which suggests that both homologues participate in the synthesis of these glycolipids. Sugar residues with a 4,6-O-(1-carboxyethylidene) group substitution have been found in carbohydrates such as extracellular polysaccharide and N-linked glycan, which are produced by some bacteria and yeasts (1, 15, 20, 22, 26). It has been shown that an increase in 4,6-O-(1-carboxyethylidene)-containing sugar residues leads to enhanced viscosity of extracellular polysaccharide from Xanthomonas sp., which alters the cell surface properties related to cellular attachment and protection from environmental stress (10). Accordingly, in terms of the properties of serovar 8-specific GPL, the presence of the 4,6-O-(1-carboxyethylidene) group might influence the pathogenicity of MAC serovar 8.
With regard to the antibody reactivity, it is unclear whether serovar 8-specific antibodies react with GPL-S8 because there are minor structural differences in the methylated positions of fatty acids and the terminal Rha residue linked to the tetrapeptide between GPL-S8 and serovar 8-specific GPL of MAC. Evaluation of the antibody response to GPL-S8 using serovar 8-specific antibodies would facilitate understanding the immunoreactivity mediated by ssGPLs.
In this study, we proved that gtfTB and adjacent genes in the GPL biosynthetic gene cluster in MAC serovar 8 strain are responsible for the formation of a unique glucose residue in serovar 8-specific GPL (Fig. 5). In particular, gtfTB encodes the glucosyltransferase that plays a critical role in the pathway leading from serovar 1-specific GPL to serovar 8-specific GPL. Through further study, including generation of gtfTB knockout mutants of MAC serovar 8 strains, results relevant to the biosynthesis of serovar 8-specific GPL might help clarify the biological function of ssGPLs and their role in the host-pathogen relationships of MAC.

ACKNOWLEDGMENTS
This study was supported in part by a Grant-in-Aid for Young
Scientists (B) from the Ministry of Education, Culture, Science
and Technology of Japan and Research on Emerging and Re-Emerging
Infectious Diseases from the Ministry of Health, Labor and Welfare
of Japan.

FOOTNOTES
* Corresponding author. Mailing address: Department of Microbiology, Leprosy Research Center, National Institute of Infectious Diseases, 4-2-1 Aobacho, Higashimurayama, Tokyo 189-0002, Japan. Phone: 81-42-391-8211. Fax: 81-42-394-9092. E-mail:
yujim{at}nih.go.jp 
Published ahead of print on 10 October 2008. 

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Journal of Bacteriology, December 2008, p. 7918-7924, Vol. 190, No. 24
0021-9193/08/$08.00+0 doi:10.1128/JB.00911-08
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