Previous Article | Next Article 
Journal of Bacteriology, February 2008, p. 872-878, Vol. 190, No. 3
0021-9193/08/$08.00+0 doi:10.1128/JB.01505-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.
Identification of a Spermidine Excretion Protein Complex (MdtJI) in Escherichia coli
Kyohei Higashi,1
Hiroyuki Ishigure,1
Risa Demizu,1
Takeshi Uemura,1
Kunihiko Nishino,2
Akihito Yamaguchi,2
Keiko Kashiwagi,3 and
Kazuei Igarashi1*
Graduate School of Pharmaceutical Sciences, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba 260-8675,1
Department of Cell Membrane Biology, Institute of Scientific and Industrial Research, Osaka University, Ibaraki, Osaka 560-0047,2
Faculty of Pharmacy, Chiba Institute of Science, 15-8 Shiomi-cho, Choshi, Chiba 288-0025, Japan3
Received 19 September 2007/
Accepted 2 November 2007

ABSTRACT
A spermidine excretion protein in
Escherichia coli was looked
for among 33 putative drug exporters thus far identified. Cell
toxicity and inhibition of growth due to overaccumulation of
spermidine were examined in an
E. coli strain deficient in spermidine
acetyltransferase, an enzyme that metabolizes spermidine. Toxicity
and inhibition of cell growth by spermidine were recovered in
cells transformed with pUC
mdtJI or pMW
mdtJI, encoding MdtJ and
MdtI, which belong to the small multidrug resistance family
of drug exporters. Both
mdtJ and
mdtI are necessary for recovery
from the toxicity of overaccumulated spermidine. It was also
found that the level of
mdtJI mRNA was increased by spermidine.
The spermidine content in cells cultured in the presence of
2 mM spermidine was decreased, and excretion of spermidine from
cells was enhanced by MdtJI, indicating that the MdtJI complex
can catalyze excretion of spermidine from cells. It was found
that Tyr
4, Trp
5, Glu
15, Tyr
45, Tyr
61, and Glu
82 in MdtJ and
Glu
5, Glu
19, Asp
60, Trp
68, and Trp
81 in MdtI are involved in
the excretion activity of MdtJI.

INTRODUCTION
Polyamines (putrescine, spermidine, and spermine) are essential
for normal cell growth (
3,
11,
12), and their content in cells
is regulated by biosynthesis, degradation, uptake, and excretion
(
5,
9,
10,
26). With regard to transport, the properties of
three polyamine transport systems were characterized in
Escherichia coli (
15,
16,
40). They include spermidine-preferential and
putrescine-specific uptake systems, which belong to the family
of ATP binding cassette transporters, and a protein, PotE, involved
in the excretion of putrescine by a putrescine-ornithine antiporter
activity. Furthermore, it has been reported that cadaverine
and aminopropylcadaverine function as compensatory polyamines
for cell growth (
13), and CadB, a cadaverine-lysine antiporter,
is strongly involved in cell growth at acidic pH, like PotE
(
23,
33,
34,
41). Analogous to the
speF-potE operon (
18),
cadB is one component of the
cadBA operon, in which
cadA encodes
lysine decarboxylase (
22,
41) and is induced by acidic pH and
lysine (
23). The
cadBA and
speF-potE operons contribute to an
increase in the pH of the extracellular medium through excretion
of cadaverine and putrescine, the consumption of a proton, and
a supply of carbon dioxide during the decarboxylation reaction
(
33,
38), so the expression of these two operons is important
for cell growth at acidic pH.
Although PotE and CadB excrete putrescine and cadaverine at acidic pH, they function as uptake proteins for putrescine and cadaverine at neutral pH (16, 33). Thus, no polyamine excretion proteins that function at neutral pH have been identified to date. Overaccumulated spermidine is either metabolized by acetylation of spermidine, in a reaction catalyzed by spermidine acetyltransferase (6), or neutralized by the increase in L-glycerol 3-phosphate (27). In this study, we looked for spermidine excretion proteins among putative drug exporters comprising five families (the major facilitator family, the small multidrug resistance [SMR] family, the resistance-nodulation-cell division family, the ATP binding cassette family, and the multidrug and toxic compound extrusion family) (25) and found that the MdtJI complex in the SMR family can catalyze excretion of spermidine at neutral pH.

MATERIALS AND METHODS
Bacterial strains and culture conditions.
E. coli CAG2242 (
speG putE44 hsdR thi thr leu lacY1 tonA21),
a spermidine acetyltransferase-deficient mutant (
2), was kindly
supplied by E. W. Gerner (University of Arizona Health Science
Center). The cells were grown in Luria-Bertani (LB) medium (10
g of tryptone per liter, 5 g of yeast extract per liter, and
10 g of NaCl per liter). Where indicated, 2 or 12 mM spermidine
was added at the onset of cell growth. Cell growth was monitored
by measuring the
A540. Cell viability was determined by counting
colonies on 1.5% agar plates containing LB medium at 37°C.
Thus, the definition of viable cells was cells that were able
to grow on the agar plate. Ampicillin (100 µg/ml), tetracycline
(15 µg/ml), and/or chloramphenicol (30 µg/ml) was
added to the medium, if necessary.
E. coli CAG2242
mdtJ::Km
r or
mdtI::Km
r was constructed by means of P1 transduction, in
which
E. coli W3110
mdtJ::Km
r or
mdtI::Km
r was used as a donor.
E. coli W3110 strains were kindly supplied by H. Mori, Nara
Institute of Science and Technology (
1).
Plasmids and site-directed mutagenesis of mdtJI.
Plasmids encoding 33 putative drug transporters in pUC119 (Takara Shuzo) were prepared as described previously (25). These plasmids included the original promoters for the drug transporter genes. Since the functions of some proteins among the 33 putative drug transporters were identified, new genetic names (Geno Base [http://ecoli.naist.jp/GB6/search.jsp]) were also attached (Fig. 1). The plasmids pMWcusA, pMWmdtABC, pMWacrD, pMWmdtJI (ydgFE), pMWsugE, pMWmdtG (yceE), pMWydiM, pMWyieO, pMWybjYZ, pMWyddA, and pMWyojIH were prepared by inserting the corresponding genes in pUC119 into pMW119 (Nippon Gene), using the same restriction enzymes. For preparation of pMWacrAB, pMWemrE, and pMWmdfA, PCRs were performed using pUCacrAB, pUCemrE, and pUCmdfA as templates, with the following primers: acrAB (SphI), 5'-ATTTTGCATGCGTATGTACCATAGCACGACG-3'; acrAB (BamHI), 5'-ATTAGGATCCACTCCTTAATGTTCGTAGGT-3'; emrE (EcoRI), 5'-CAGAGAATTCCGATGAAACGGGTATTGAGG-3'; emrE (SphI), 5'-TATTGCATGCTTCTTACGCCATAATCTTGA-3'; mdfA (EcoRI), 5'-GTAAGAATCGCTTAACCGTGGTTTCAGCT-3'; and mdfA (HindIII), 5'-GAGAAAGCTTGATCGCACAAAGCAGTCAGG-3'. The PCR products thus obtained were digested with SphI and BamHI for acrAB, EcoRI and SphI for emrE, and EcoRI and HindIII for mdfA, and the fragments were inserted into the same restriction sites of pMW119.
For preparation of pUC
mdtJ (
ydgF) and pUC
mdtI (
ydgE), PCRs were
performed using pUC
mdtJI (
ydgFE) as the template, with the following
primers: P-J1, 5'-GGTTTCGCTGGATCCAGCGAAAATTAA-3'; P-J2, 5'-CAAAAAGACGTTAGCAACGAATTCCAGCAC-3';
P-I1, 5'-CAGGTACCCGGATCCCGCGTAAACCTGAAC-3'; and P-I2, 5'-AAAATAGAATTCAAACGCTGCCCGACAGCG-3'.
The PCR products thus obtained were digested with BamHI and
EcoRI, and the fragments were inserted into the same restriction
site of pUC119. Plasmids pUC
mdtJ (
ydgF) and pUC
mdtI (
ydgE) were
under the control of the
lacUV5 promoter instead of the original
promoter.
Plasmid YEp-HA3 with 170 bp of the 3'-untranslated region (3'-UTR) of the UGA4 gene (YEp-HA3-3'-UTR·UGA4) (39) was used for preparation of YEp-mdtJ-HA3. The BamHI site of the HA3 region of YEp-HA3-3'-UTR·UGA4 was deleted by site-directed mutagenesis, and then the mdtJ gene, containing the promoter region and the open reading frame lacking the termination codon, was inserted into the SalI and BamHI sites of the plasmid to fuse to the HA3 tag. pUCmdtJ-HA3 was prepared by inserting the 0.7-kb SalI-EcoRI fragment of YEp-MdtJ-HA3 into the same restriction site of pUC119. pCA24N-mdtI with an IPTG (isopropyl-β-D-thiogalactopyranoside)-inducible promoter, pT5/lac, and a His tag in the NH2 terminus of MdtI was kindly supplied by H. Mori, National BioResource Project (NIG, Japan) (20). Site-directed mutagenesis for the construction of mutated mdtJ (ydgF) and mdtI (ydgE) genes was performed using pUCmdtJI, encoding both MdtJ and MdtI in an operon, by overlap extension using PCR (8) or with a QuikChange site-directed mutagenesis kit (Stratagene) according to the manufacturer's protocol. The nucleotide sequences of the plasmids were confirmed with a CEQ8000 DNA genetic analysis system (Beckman Coulter).
Dot blot analysis.
Total RNA was prepared from E. coli CAG2242 transformed with pUCmdtJI (ydgFE) or pMWmdtJI (ydgFE) according to the method of Emory and Belasco (4). Dot blot analysis was performed using various amounts of total RNA and a 32P-labeled probe consisting of 400 bp of mdtI, which was labeled with [
-32P]dCTP by use of a BcaBEST labeling kit (Takara Shuzo) (30).
Western blot analysis.
Western blotting was performed by the method of Nielsen et al. (24), using 40 µg of cell lysate and ECL Western blotting reagents (GE Healthcare). Mouse monoclonal anti-hemagglutinin (anti-HA) antibody (clone HA-7) and rabbit anti-six-His antibody were purchased from Sigma and Bethyl Laboratories, respectively.
Measurement of polyamines.
Polyamine levels in E. coli were determined by high-performance liquid chromatography, as described previously (13), after homogenization and extraction of the polyamines with 5% trichloroacetic acid and centrifugation at 27,000 x g for 15 min at 4°C. The retention times for putrescine, spermidine, and spermine were 6.7, 13, and 25 min, respectively. Protein content in the precipitate was determined by the method of Lowry et al. (21).
Assay for spermidine excretion from cells.
E. coli CAG2242 cells transformed with either pUC119 or pUCmdtJI were cultured as described above and harvested at an A540 of 0.5. After cells were washed with buffer 1, containing 0.4% glucose, 62 mM potassium phosphate, pH 7.0, 1.7 mM sodium citrate, 7.6 mM (NH4)2SO4, and 0.41 mM MgSO4, [14C]spermidine was preloaded by the incubation of cells (0.2 mg protein/ml buffer 1) with 1 mM [14C]spermidine (37 MBq/mmol) for 90 min. After cells were washed with buffer 1, spermidine excretion from cells was measured by incubating cells (0.2 mg/ml buffer 1) at 37°C for the designated times. The cells were then removed by centrifugation at 17,000 x g for 5 min at 4°C, and the radioactivity of the supernatant (0.5 ml) was counted by a liquid scintillation counter. When excreted polyamines were analyzed by high-performance liquid chromatography, nonlabeled spermidine was used instead of [14C]spermidine.

RESULTS
Identification of spermidine excretion protein.
We previously reported that spermidine toxicity is increased
due to overaccumulation of spermidine when spermidine acetyltransferase
is deficient (
6). To look for a spermidine excretion protein(s),
cell viability was estimated using
E. coli CAG2242, which is
deficient in spermidine acetyltransferase (
2), after transformation
with a candidate gene potentially encoding a spermidine excretion
protein. First, recovery of cell viability, i.e., spermidine
excretion activity, was examined using cells transformed with
33 kinds of drug transporters (
25). As shown in Fig.
1A, the
viability of
E. coli CAG2242 cultured in the presence of 2 mM
spermidine was reduced to <0.1% compared with that of cells
cultured without spermidine. When the
mdtJI gene was transformed
into
E. coli CAG2242, cell viability during culture with 2 mM
spermidine increased >1,000-fold (Fig.
1A and B). Essentially
the same results were obtained when
E. coli CAG2242
mdtJ::Km
r or
mdtI::Km
r was used instead of
E. coli CAG2242 (data not shown).
When genes for the other 32 drug transporters were transformed,
the viability of
E. coli CAG2242 did not increase significantly
(Fig.
1B). It has been reported that
mdtJ and
mdtI are coexpressed
(
25). When either
mdtJ or
mdtI was transformed alone, the cell
viability of
E. coli CAG2242 did not increase significantly
(Fig.
1A), indicating that both the MdtJ and MdtI proteins are
required to rescue cell viability during culture with 2 mM spermidine.
Among 33 genes for drug transporters, the expression of 13 of these genes by the multicopy vector pUC119 significantly inhibited cell growth in the absence of spermidine. Thus, the effect of expression of these genes on cell viability was examined using the low-copy-number vector pMW119. However, there was no significant effect of these genes on viability of E. coli CAG2242 cultured with 2 mM spermidine (data not shown). We then tested whether growth of E. coli CAG2242 cultured with a higher concentration of spermidine (12 mM) was influenced by the expression of these genes inserted in the low-copy-number pMW119 vector. As shown in Fig. 2, growth of E. coli CAG2242 was significantly inhibited by 12 mM spermidine. Expression of the same 13 genes as those studied previously did not influence the growth of E. coli CAG2242 cultured with 12 mM spermidine, whereas cell growth was rescued by the expression of mdtJI. The degree of the rescue of cell growth was greater with pUCmdtJI than with pMWmdtJI. The results strongly suggest that mdtJI can enhance cell viability and growth through excretion of spermidine when spermidine overaccumulates in cells.
Excretion of spermidine by MdtJI.
It was then determined whether spermidine can be excreted from
E. coli CAG2242 by MdtJI. When the spermidine and putrescine
contents were measured in
E. coli CAG2242 cultured with or without
2 mM spermidine, overaccumulation of spermidine, but not putrescine,
was observed in cells cultured with spermidine (Table
1). When
mdtJI was transformed into
E. coli CAG2242, accumulation of
spermidine in
E. coli CAG2242 cultured with 2 mM spermidine
was greatly diminished in parallel with the recovery of cell
viability (Table
1 and Fig.
1). Next, excretion of [
14C]spermidine
by MdtJI was examined. As shown in Fig.
3A, excretion of accumulated
[
14C]spermidine was observed in cells transformed with pUC
mdtJI but not in cells carrying a vector. Excretion of spermidine
from cells was confirmed by measuring the level of polyamines
in the reaction mixture after removal of cells by centrifugation.
As shown in Fig.
3B, the level of spermidine in the reaction
mixture at 40 min increased significantly when pUC
mdtJI was
transformed into cells. These results indicate that MdtJI can
catalyze the excretion of spermidine.
Increase in the level of mdtJI mRNA by spermidine.
We examined whether the level of
mdtJI mRNA was increased by
spermidine. The level of
mdtJI mRNA was measured by dot blot
analysis. The level of
mdtJI mRNA expressed from host genes
was very low (Fig.
4). Expression of
mdtJI mRNA was clearly
observed only when pMW
mdtJI or pUC
mdtJI was transformed into
cells. As shown in Fig.
4A, the level of
mdtJI mRNA was increased
about 1.5- to 2.0-fold by 2 mM spermidine during culture from
12 h to 36 h when pUC
mdtJI was transformed into cells. When
cells were cultured in the presence of 12 mM spermidine, the
level of
mdtJI mRNA was greatly increased in cells transformed
with either pMW
mdtJI or pUC
mdtJI 2 h after the onset of cell
growth (Fig.
4B). However, when pMW
mdtJI was transformed into
cells, the level of
mdtJI mRNA decreased 4 h after the onset
of cell growth (Fig.
4B), in parallel with the slowdown of cell
growth (Fig.
2). The results indicate that the increase in the
level of
mdtJI mRNA by spermidine is important for the decrease
in spermidine toxicity.
Identification of functional amino acids in MdtJI.
We previously identified the functional amino acids which recognize
spermidine on the substrate binding protein PotD in the spermidine-preferential
uptake system (
17,
36). They were acidic amino acids (Glu and
Asp) and aromatic amino acids (Trp and Tyr). To determine the
functional amino acids in MdtJ and MdtI, Asp, Glu, Trp, and
Tyr were replaced by Asn, Gln, Leu, and Leu, respectively, and
the viability of cells carrying mutated pUC
mdtJI cultured with
2 mM spermidine was measured 48 h after the onset of cell growth.
As shown in Fig.
5A, mutation of Tyr
4, Trp
5, Glu
15, Tyr
45, Tyr
61,
and Glu
82 in MdtJ and Glu
5, Glu
19, Asp
60, Trp
68, and Trp
81 in
MdtI decreased cell viability >100-fold compared to that
of the wild-type MdtJI complex. The activity of spermidine excretion
also decreased in these mutants, judging from the increased
level of spermidine in cells (Table
2). The levels of the mutated
proteins were nearly equal to those of wild-type MdtJ and MdtI
(Fig.
5B). The results indicate that these amino acid residues
are important for the activity of spermidine excretion by MdtJI.
The results are in accordance with the idea that NH
2 and NH
groups of spermidine are recognized by Asp and Glu and that
propyl and butyl groups of spermidine are recognized by Trp
and Tyr in MdtJI proteins (
17,
36).
The MdtJI proteins belong to the SMR family. Proteins in the
SMR family (EmrE, MdtJI, and SugE) are thought to have four
transmembrane segments. It has also been reported that the structure
of EmrE is a parallel dimer (
35). If MdtJ and MdtI have parallel
topology, most of the functional amino acid residues would be
located in the cytoplasmic side (Fig.
5C), in a situation similar
to that of other putrescine and cadaverine excretion proteins,
such as PotE and CadB (
16,
34).

DISCUSSION
It is known that overaccumulation of spermidine and/or spermine
inhibits growth in both
E. coli (
6) and mammalian cells (
7).
Thus, the enzymes that metabolize spermidine and/or spermine—spermidine
acetyltransferase in
E. coli (
6) and spermidine/spermine
N1-acetyltransferase
in mammalian cells (
7)—are induced when spermidine and/or
spermine overaccumulates (
6,
7). Once spermidine and/or spermine
is acetylated, it cannot interact with RNA, and inhibition of
protein synthesis due to overaccumulation of spermidine and/or
spermine is relieved (
14). The second mechanism to decrease
polyamine toxicity is induction of
L-glycerol 3-phosphate, which
makes a complex with spermidine (
27). Accordingly, inhibition
of protein synthesis due to overaccumulation of spermidine is
relieved. This was observed when AcrD and AcrEF were overproduced
(Fig.
1).
The third mechanism to decrease polyamine toxicity is excretion of polyamines from cells. Since spermidine acetyltransferase does not exist in Saccharomyces cerevisiae, there are five excretion proteins (TPO1 to TPO5) in yeast (37). There were no previous reports identifying a spermidine excretion protein in E. coli. To find the spermidine excretion protein(s), a spermidine acetyltransferase-deficient mutant, CAG2242, was used. In this study, we have shown that the MdtJI protein complex can excrete spermidine. It is likely that the MdtJI protein complex is the major spermidine excretor in E. coli and contributes to relief from spermidine toxicity. In connection with this, it is noted that the level of mdtJI mRNA is increased in the presence of spermidine. This is most likely due to the enhancement of transcription of mdtJI mRNA by spermidine rather than to stabilization of its mRNA. Such an increase in mdtJI mRNA by spermidine strongly contributes to the relief of toxicity by overaccumulation of spermidine.
It has been reported that expression of MdtJI causes resistance to sodium dodecyl sulfate and deoxycholate (25). Therefore, this is the first report that the MdtJI complex excretes positively charged substances such as spermidine. In this respect, it is noted that EmrE and SugE, which also belong to the SMR family, can recognize positively charged substances such as tetraphenylphosphonium (TPP+) (28, 31, 32). The total number of functional amino acid residues (Asp, Glu, Trp, and Tyr) in MdtJI was similar to that in the EmrE homodimer (28, 31). However, as for acidic amino acid residues, five molecules were necessary for excretion of spermidine by MdtJI, although only two molecules were necessary for excretion of TPP+ by the EmrE homodimer. This may be due to a difference in the numbers of positive charges in spermidine and TPP+.

ACKNOWLEDGMENTS
We thank A. J. Michael for his kind help in preparing the manuscript.
Thanks are also due to E. W. Gerner and H. Mori for kindly supplying
E. coli CAG2242,
E. coli W3110
mdtJ::Km
r or
mdt::Km
r, and pCA24N-
mdtI plasmid.
This work was supported in part by a grant-in-aid for scientific research from the Ministry of Education, Science, Sports, and Culture, Japan.

FOOTNOTES
* Corresponding author. Mailing address: Graduate School of Pharmaceutical Sciences, Chiba University, 1-8-1 Inohana, Chuo-ku, Chiba 260-8675, Japan. Phone: 81-43-226-2871. Fax: 81-43-226-2873. E-mail:
iga16077{at}p.chiba-u.ac.jp 
Published ahead of print on 26 November 2007. 

REFERENCES
1 - Baba, T., T. Ara, M. Hasegawa, Y. Takai, Y. Okumura, M. Baba, K. A. Datsenko, M. Tomita, B. L. Wanner, and H. Mori. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2:2006.0008.
2 - Carper, S. W., D. G. Willis, K. A. Manning, and E. W. Gerner. 1991. Spermidine acetylation in response to a variety of stress in Escherichia coli. J. Biol. Chem. 266:12439-12441.[Abstract/Free Full Text]
3 - Cohen, S. S. 1998. A guide to the polyamines, p. 1-543. Oxford University, Oxford, United Kingdom.
4 - Emory, S. A., and J. G. Belasco. 1990. The ompA 5' untranslated RNA segment functions in Escherichia coli as a growth-rate-regulated mRNA stabilizer whose activity is unrelated to translational efficiency. J. Bacteriol. 172:4472-4481.[Abstract/Free Full Text]
5 - Fogel-Petrovic, M., S. Vujcic, P. J. Brown, M. K. Haddox, and C. W. Porter. 1996. Effect of polyamines, polyamine analogs, and inhibitors of protein synthesis on spermidine-spermine N1-acetyltransferase gene expression. Biochemistry 35:14436-14444.[CrossRef][Medline]
6 - Fukuchi, J., K. Kashiwagi, M. Yamagishi, A. Ishihama, and K. Igarashi. 1995. Decrease in cell viability due to the accumulation of spermidine in spermidine acetyltransferase-deficient mutant of Escherichia coli. J. Biol. Chem. 270:18831-18835.[Abstract/Free Full Text]
7 - He, Y., K. Kashiwagi, J. Fukuchi, K. Terao, A. Shirahata, and K. Igarashi. 1993. Correlation between the inhibition of cell growth by accumulated polyamines and the decrease of magnesium and ATP. Eur. J. Biochem. 217:89-96.[Medline]
8 - Ho, S. N., H. D. Hunt, R. M. Horton, J. K. Pullen, and L. R. Pease. 1989. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77:51-59.[CrossRef][Medline]
9 - Igarashi, K., K. Ito, and K. Kashiwagi. 2001. Polyamine uptake systems in Escherichia coli. Res. Microbiol. 152:271-278.[Medline]
10 - Igarashi, K., and K. Kashiwagi. 1999. Polyamine transport in bacteria and yeast. Biochem. J. 344:633-642.[CrossRef][Medline]
11 - Igarashi, K., and K. Kashiwagi. 2000. Polyamines: mysterious modulators of cellular functions. Biochem. Biophys. Res. Commun. 271:559-564.[CrossRef][Medline]
12 - Igarashi, K., and K. Kashiwagi. 2006. Polyamine modulon in Escherichia coli: genes involved in the stimulation of cell growth by polyamines. J. Biochem. (Tokyo) 139:11-16.[Abstract/Free Full Text]
13 - Igarashi, K., K. Kashiwagi, H. Hamasaki, A. Miura, T. Kakegawa, S. Hirose, and S. Matsuzaki. 1986. Formation of a compensatory polyamine by Escherichia coli polyamine-requiring mutants during growth in the absence of polyamines. J. Bacteriol. 166:128-134.[Abstract/Free Full Text]
14 - Kakegawa, T., Y. Guo, Y. Chiba, T. Miyazaki, M. Nakamura, S. Hirose, Z. N. Canellakis, and K. Igarashi. 1991. Effect of acetylpolyamines on in vitro protein synthesis and on the growth of a polyamine-requiring mutant of Escherichia coli. J. Biochem. (Tokyo) 109:627-631.[Abstract/Free Full Text]
15 - Kashiwagi, K., A. Innami, R. Zenda, H. Tomitori, and K. Igarashi. 2002. The ATPase activity and the functional domain of PotA, a component of the spermidine-preferential uptake system in Escherichia coli. J. Biol. Chem. 277:24212-24219.[Abstract/Free Full Text]
16 - Kashiwagi, K., A. Kuraishi, H. Tomitori, A. Igarashi, K. Nishimura, A. Shirahata, and K. Igarashi. 2000. Identification of the putrescine recognition site on polyamine transport protein PotE. J. Biol. Chem. 275:36007-36012.[Abstract/Free Full Text]
17 - Kashiwagi, K., R. Pistocchi, S. Shibuya, S. Sugiyama, K. Morikawa, and K. Igarashi. 1996. Spermidine-preferential uptake system in Escherichia coli. Identification of amino acids involved in polyamine binding in PotD protein. J. Biol. Chem. 271:12205-12208.[Abstract/Free Full Text]
18 - Kashiwagi, K., T. Suzuki, F. Suzuki, T. Furuchi, H. Kobayashi, and K. Igarashi. 1991. Coexistence of the genes for putrescine transport protein and ornithine decarboxylase at 16 min on Escherichia coli chromosome. J. Biol. Chem. 266:20922-20927.[Abstract/Free Full Text]
19 - Kellenberger, E. 1996. Structure and function at the subcellular level, p. 17-28. In F. C. Neidhardt et al. (ed.), Escherichia coli and Salmonella: cellular and molecular biology, vol. 1. ASM Press, Washington, DC.
20 - Kitagawa, M., T. Ara, M. Arifuzzaman, T. Ioka-Nakamichi, E. Inamoto, H. Toyonaga, and H. Mori. 2005. Complete set of ORF clones in Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research. DNA Res. 12:291-299.[Abstract/Free Full Text]
21 - Lowry, O. H., N. J. Rosebrough, A. L. Farr, and R. J. Randall. 1951. Protein measurement with the Folin phenol reagent. J. Biol. Chem. 193:265-275.[Free Full Text]
22 - Meng, S. Y., and G. N. Bennett. 1992. Nucleotide sequence of the Escherichia coli cad operon: a system for neutralization of low extracellular pH. J. Bacteriol. 174:2659-2669.[Abstract/Free Full Text]
23 - Neely, M. N., and E. R. Olson. 1996. Kinetics of expression of the Escherichia coli cad operon as a function of pH and lysine. J. Bacteriol. 178:5522-5528.[Abstract/Free Full Text]
24 - Nielsen, P. J., K. L. Manchester, H. Towbin, J. Gordon, and G. Thomas. 1982. The phosphorylation of ribosomal protein S6 in rat tissues following cycloheximide injection, in diabetes, and after denervation of diaphragm. A simple immunological determination of the extent of S6 phosphorylation on protein blots. J. Biol. Chem. 257:12316-12321.[Abstract/Free Full Text]
25 - Nishino, K., and A. Yamaguchi. 2001. Analysis of a complete library of putative drug transporter genes in Escherichia coli. J. Bacteriol. 183:5803-5812.[Abstract/Free Full Text]
26 - Pegg, A. E. 1988. Polyamine metabolism and its importance in neoplastic growth and a target for chemotherapy. Cancer Res. 48:759-774.[Abstract/Free Full Text]
27 - Raj, V. S., H. Tomitori, M. Yoshida, A. Apirakaramwong, K. Kashiwagi, K. Takio, A. Ishihama, and K. Igarashi. 2001. Properties of a revertant of Escherichia coli viable in the presence of spermidine accumulation: increase in L-glycerol 3-phosphate. J. Bacteriol. 183:4493-4498.[Abstract/Free Full Text]
28 - Rotem, D., S. Steiner-Mordoch, and S. Schuldiner. 2006. Identification of tyrosine residues critical for the function of an ion-coupled multidrug transporter. J. Biol. Chem. 281:18715-18722.[Abstract/Free Full Text]
29 - Rottenberg, H. 1979. The measurement of membrane potential and
pH in cells, organelles, and vesicles. Methods Enzymol. 55:547-569.[Medline] 30 - Sambrook, J., E. F. Fritsch, and T. Maniatis. 2001. Dot and slot hybridization of purified RNA, p. 7.46-7.50. In J. Sambrook and S. W. Russell (ed.), Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
31 - Sharoni, M., S. Steiner-Mordoch, and S. Schuldiner. 2005. Exploring the binding domain of EmrE, the smallest multidrug transporter. J. Biol. Chem. 280:32849-32855.[Abstract/Free Full Text]
32 - Sikora, C. W., and R. J. Turner. 2005. SMR proteins SugE and EmrE bind ligand with similar affinity and stoichiometry. Biochem. Biophys. Res. Commun. 335:105-111.[CrossRef][Medline]
33 - Soksawatmaekhin, W., A. Kuraishi, K. Sakata, K. Kashiwagi, and K. Igarashi. 2004. Excretion and uptake of cadaverine by CadB and its physiological functions in Escherichia coli. Mol. Microbiol. 51:1401-1412.[CrossRef][Medline]
34 - Soksawatmaekhin, W., T. Uemura, N. Fukiwake, K. Kashiwagi, and K. Igarashi. 2006. Identification of cadaverine recognition site on the cadaverine-lysine antiporter CadB. J. Biol. Chem. 281:29213-29220.[Abstract/Free Full Text]
35 - Soskine, M., S. Mark, N. Tayer, R. Mizrachi, and S. Schuldiner. 2006. On parallel and antiparallel topology of an homomeric multidrug transporter. J. Biol. Chem. 281:36205-36212.[Abstract/Free Full Text]
36 - Sugiyama, S., D. G. Vassylyev, M. Matsushima, K. Kashiwagi, K. Igarashi, and K. Morikawa. 1996. Crystal structure of PotD, the primary receptor of the polyamine transport system in Escherichia coli. J. Biol. Chem. 271:9519-9525.[Abstract/Free Full Text]
37 - Tachihara, K., T. Uemura, K. Kashiwagi, and K. Igarashi. 2005. Excretion of putrescine and spermidine by the protein encoded by YKL174c (TPO5) in Saccharomyces cerevisiae. J. Biol. Chem. 280:12637-12642.[Abstract/Free Full Text]
38 - Takayama, M., T. Ohyama, K. Igarashi, and H. Kobayashi. 1994. Escherichia coli cad operon functions as a supplier of carbon dioxide. Mol. Microbiol. 11:913-918.[Medline]
39 - Uemura, T., K. Tachihara, H. Tomitori, K. Kashiwagi, and K. Igarashi. 2005. Characteristics of the polyamine transporter TPO1 and regulation of its activity and cellular localization by phosphorylation. J. Biol. Chem. 280:9646-9652.[Abstract/Free Full Text]
40 - Vassylyev, D. G., H. Tomitori, K. Kashiwagi, K. Morikawa, and K. Igarashi. 1998. Crystal structure and mutational analysis of the Escherichia coli putrescine receptor. Structural basis for substrate specificity. J. Biol. Chem. 273:17604-17609.[Abstract/Free Full Text]
41 - Watson, N., D. S. Dunyak, E. L. Rosey, J. L. Slonczewski, and E. R. Olson. 1992. Identification of elements involved in transcriptional regulation of the Escherichia coli cad operon by external pH. J. Bacteriol. 174:530-540.[Abstract/Free Full Text]
Journal of Bacteriology, February 2008, p. 872-878, Vol. 190, No. 3
0021-9193/08/$08.00+0 doi:10.1128/JB.01505-07
Copyright © 2008, American Society for Microbiology. All Rights Reserved.
This article has been cited by other articles:
-
Uemura, T., Yerushalmi, H. F., Tsaprailis, G., Stringer, D. E., Pastorian, K. E., Hawel, L. III, Byus, C. V., Gerner, E. W.
(2008). Identification and Characterization of a Diamine Exporter in Colon Epithelial Cells. J. Biol. Chem.
283: 26428-26435
[Abstract]
[Full Text]