Complete Genome Sequence and Comparative Genome Analysis of Enteropathogenic Escherichia coli O127:H6 Strain E2348/69
J. Bacteriol. Iguchi et al.
191: 347
Supplemental material
Files in this Data Supplement:
- Supplemental file 1
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Fig. S1, strategy for genomic comparison of E2348/69 with eight E. coli strains.
Zipped PDF file, 738K.
- Supplemental file 2
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Fig. S2, circular map of pMAR2 and comparison with pMAR7.
Zipped PDF file, 334K.
- Supplemental file 3
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Fig. S3, phylogeny of EPEC strain E2348/69 among E. coli strains.
Zipped PDF file, 776K.
- Supplemental file 4
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Fig. S4, prophages and integrative elements in E2348/69.
Zipped PDF file, 832K.
- Supplemental file 5
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Fig. S5, dot-plot presentation of DNA sequence homologies between lambda-like prophages of E2348/69 and O157 Sakai.
Zipped PDF file, 802K.
- Supplemental file 6
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Fig. S6, genetic organization of the E2348/69 yeeO-yeeX locus.
Zipped PDF file, 228K.
- Supplemental file 7
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Fig. S7, comparison of type II secretion systems encoded on the E2348/69 genome and the eight sequenced E. coli genomes.
Zipped PDF file, 1MB.
- Supplemental file 8
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Table S1, general genome features of EPEC E2348/69.
Zipped PDF file, 34K.
- Supplemental file 9
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Table S2, list of prophages and integrative elements of E2348/69.
Zipped PDF file, 51K.
- Supplemental file 10
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Table S3, IS elements identified on the E2348/69 genome.
Zipped PDF file, 42K.
- Supplemental file 11
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Table S4, E2348/69-specific genes on the chromosome backbone.
Zipped PDF file, 54K.
- Supplemental file 12
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Table S5, E2348/69 genes or gene families found only in the B2 group and their conservation patterns among other B2 strains.
Zipped PDF file, 60K.
- Supplemental file 13
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Table S6, pseudogenes in EPEC E2348/69.
Zipped PDF file, 60K.
- Supplemental file 14
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Table S7, virulence-related genes identified in EPEC E2348/69 and homologues in O157 Sakai.
Zipped PDF file, 58K.
- Supplemental file 15
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Table S8, distribution of the 23 fimbrial biosynthesis operons identified in E2348/69, CFT073, and O157 Sakai among nine sequenced E. coli strains.
Zipped PDF file, 75K.
- Supplemental file 16
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Table S9, distribution of 12 iron uptake-related operons identified in E2348/69, CFT073, and O157 Sakai among nine sequenced E. coli strains.
Zipped PDF file, 62K.
- Supplemental file 17
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Table S10, two-component regulatory systems identified in E2348/69, CFT073 and O157 Sakai among nine sequenced strains.
Zipped PDF file, 51K.
