Files in this Data Supplement:

• Supplemental file 1 - Supplemental file 1, Genesis data files.
  5 Zipped TXT files and 3 Zipped XML files, 494K.
• Supplemental file 2 - Table S1, gene annotation (flagged features).
  MS Excel file, 22K.
• Supplemental file 3 - Table S2A, expression ratios.
  Zipped MS Excel file, 1.8MB.
• Supplemental file 4 - Table S2B, mean expression ratios.
  Zipped MS Excel file, 670K.
• Supplemental file 5 - Table S2C, expression statistics.
  Zipped MS Excel file, 397K.
• Supplemental file 6 - Table S3, predicted orthologs.
  Zipped MS Excel file, 121K.
• Supplemental file 7 - Fig. S1, Growth and substrate usage after shifting to growth with different terminal electron acceptors.
  Zipped PDF file, 103K.
• Supplemental file 8 - Fig. S2, Genomic organization, transcriptional expression, and promoter region schematics of genes for nitrate, nitrite, and nitric oxide reductases.
  Zipped PDF file, 673K.
• Supplemental file 9 - Fig. S3, Expression and promoter region schematics of a multicopper oxidase gene and other genes up-regulated during growth on nitrate.
  Zipped PDF file, 114K.
• Supplemental file 10 - Fig. S4, Microarray expression profiles for genes up-regulated during growth on ferric citrate and Northern analysis of the succinate dehydrogenase large subunit.
  Zipped PDF file, 174K.
• Supplemental file 12 - Legends to Fig. S1 through S5.
  MS Word file, 51K.
• Supplemental file 11 - Fig. S5, gene expression profiles and Northern analysis of genes down-regulated during growth on ferric citrate, Northern analysis of genes for a ferritin-like protein and a putative ferric uptake regulator homolog, and promoter schematics.
  Zipped PDF file, 561K.