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Journal of Bacteriology, April 2009, p. 2163-2168, Vol. 191, No. 7
0021-9193/09/$08.00+0 doi:10.1128/JB.01489-08
Copyright © 2009, American Society for Microbiology. All Rights Reserved.

Howard Hughes Medical Institute and Department of Molecular Biology and Microbiology, Tufts University School of Medicine, 136 Harrison Avenue, Boston, Massachusetts 02111
Received 22 October 2008/ Accepted 12 January 2009
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S. pneumoniae has many virulence factors that contribute to its ability to cause disease. One of these is the 53-kDa pore-forming toxin pneumolysin (Ply). Ply has multiple independent activities (12, 23). Ply activates complement (21), stimulates host cell apoptosis (8), and acts as a cholesterol-dependent cytolysin (CDC) by binding to cholesterol in the host cell plasma membrane, oligomerizing, inserting into the eukaryotic membrane, and forming a pore 350 to 450 Å in diameter (2, 9). Virtually all clinical isolates express Ply, and strains in which ply has been deleted are attenuated in animal models of colonization and infection (19). A toxoid (nonlytic) version of Ply has been shown to constitute a protective antigen against subsequent S. pneumoniae challenge in mice (1, 20).
Ply functions extracellularly, yet unlike all other members of the CDC family, Ply has no N-terminal signal peptide (25). Early studies of Ply reported that it has a cytoplasmic localization in S. pneumoniae (13). This report, along with the observation that Ply is not found in culture supernatants until cells have undergone autolysis, suggests a cell lysis-dependent release of Ply. Autolysis is a well-studied stationary-phase phenomenon that occurs in vitro (16). LytA, a cell wall-bound murein hydrolase, is required for autolysis; two other minor lysins, LytC and CbpD, also contribute to this process (10). It is unclear whether autolysis is a laboratory artifact or not; however, strains deficient in LytA are attenuated in mouse models of infection, and this is suggestive of a role for autolysis in vivo (6). The release of Ply into the host milieu upon autolysis has been a working hypothesis in the field for the past 20 years, and as such, subsequent studies that have analyzed Ply's activity or presence have considered only a cytoplasmic or lysis-mediated extracellular location.
Recently, evidence contradicting this model has emerged. Certain strains have been reported to release Ply into the culture supernatant in early stationary phase, when autolysis of the culture has not yet occurred (4). Additionally, Ply has been reported to be released in the absence of LytA, indicating an autolysis-independent release of Ply (3).
In this report, we build on these studies to show lysis-independent export of Ply, specifically to the cell wall compartment. This cell wall localization is surprising, given that Ply lacks not only a signal peptide but also any of the known gram-positive cell wall anchor motifs. Additionally, we show that this cell wall-localized Ply has hemolytic activity, is accessible to protease, and is detergent releasable.
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TABLE 1. Strains used in this study
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Hemolytic assays. Hemolytic assays were performed as described in reference 3, with some modifications. Samples of culture supernatants (not TCA precipitated), cell wall, and protoplasts were pooled, and 100 µl of each fraction was serially twofold diluted in assay buffer (10 mM dithiothreitol [DTT] and 0.1% bovine serum albumin in PBS) in a 96-well U-bottom plate. Fifty microliters of triple-washed 2% sheep red blood cells was added to the dilutions and incubated for 1 h at 37°C. Plates were spun at 233 x g for 10 min, and hemolytic units were determined by eye. Hemolytic units are equal to the reciprocal of the highest dilution at which there was 100% lysis. Cell wall and protoplast hemolytic units were divided by 10 to normalize them to the same volume as the culture supernatant.
Western blotting analysis. Equal volumes of samples were boiled in sodium dodecyl sulfate (SDS) sample buffer (50 mM Tris-HCl, pH 6.8, 2% SDS, 0.5% bromophenol blue, 10% glycerol, 100 mM β-mercaptoethanol), cooled, and loaded onto an SDS-polyacrylamide gel electrophoresis (PAGE) gel and run for 25 min at 75 V and an additional 90 min at 125 V. Proteins were transferred to a nitrocellulose membrane at 25 V for 1 h. Membranes were cut and blocked with 5% skim milk in PBS for 1 h. Primary antibody to Ply (Statens Serum Institut) at 1:1,000, CodY (a gift of A.L. Sonenshein) at 1:10,000, or RrgB (14) at 1:2,500 diluted in milk was applied to membrane for 1 h at room temperature. Membranes were washed three times for 10 min each with PBS-0.1% Tween. Horseradish peroxidase-conjugated antibody (Roche) was applied to membrane at a 1:2,500 dilution in milk. Membranes were washed as described above and developed with the ECL-Plus horseradish peroxidase Western blotting detection kit (Amersham).
Proteinase K treatment. Cells were grown to an OD600 of 0.6, pelleted, washed once, and resuspended in PBS. Cells were treated with various concentrations (0.05, 0.1, and 0.2 µg/ml) of proteinase K for 1 min at room temperature. The cells were washed once with protease inhibitor cocktail (Roche) and were then fractionated into cell wall and protoplasts as described above. Ten microliters of each sample was run on an SDS-PAGE gel, and Western blotting was performed to detect Ply and CodY.
Released-protein assay. Cells were grown to an OD600 of 0.6, pelleted, and washed once in PBS. Cells were then treated with 500 µl of various compounds (0.1, 0.2, 0.5, and 1 M NaCl or MgCl2; 10 mM DTT; 0.1 M Na2CO3; 8 M urea; 0.1% or 0.05% SDS or H2O) for 15 min at room temperature. Cells were pelleted and supernatant proteins were concentrated with TCA as described above. Protein pellets were resuspended in 100 µl 50 mM Tris, pH 7.5. Cell pellets were resuspended with 100 µl 50 mM Tris, pH 7.5. Ten microliters of each sample was run on an SDS-PAGE gel, and Western blotting was performed to detect Ply and CodY.
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FIG. 1. Hemolytic assay of culture supernatant and cell wall and protoplast fractions of TIGR4 (serotype 4), D39 (serotype 2), TIGR4 ply, and D39 ply strains. The cell wall fraction has the most hemolytic activity of all fractions in both wt strains, whereas no hemolytic activity was detected in the ply mutant derivatives. The dotted line represents the limit of detection. Bars show the means of three biological replicates, and error bars indicate the standard errors of the means.
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FIG. 2. Western blot analysis of fractionated S. pneumoniae TIGR4, D39, TIGR4 ply, and D39 ply strains. Ply is found in the cell wall of both wt strains, whereas the cytoplasmic control protein CodY is found exclusively in the protoplast fraction. RrgB, a multimeric cell wall protein specific to TIGR4, is found primarily in the cell wall lane for the two TIGR4 strains. Ply is absent in the ply mutant strain. Sup, culture supernatant; CW, cell wall; Prt, protoplast.
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FIG. 3. Ply is surface exposed. Cells were treated with increasing amounts of proteinase K for 1 min at room temperature, treated with protease inhibitor, fractionated into cell wall and protoplast compartments, and Western blotted for Ply and CodY. Ply is hydrolyzed in the cell wall by proteinase K treatment without any cell lysis. CW, cell wall; Prt, protoplast.
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FIG. 4. Cell wall localization of Ply is a general phenomenon. Fractionation and Western blot analysis of seven representative serotype strains from a bank of clinical isolates. All isolates contain Ply in the cell wall fraction. Sup, culture supernatant; CW, cell wall; Prt, protoplast.
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FIG. 5. Ply is localized to the cell wall fraction throughout exponential phase and into stationary phase. Fractionation and Western blot analysis of cells collected and normalized to OD at various points throughout growth. Sup, culture supernatant; CW, cell wall; Prt, protoplast; o/n, overnight.
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FIG. 6. Ply release assays. Cells were treated with increasing concentrations (0 to 1 M) of either monovalent cation (NaCl) (A) or divalent cation (MgCl2) (B), 8 M urea, 10 mM DTT, or 0.1 M Na2CO3 (C), or 0.1% or 0.05% SDS (D) and then separated into released proteins (S) and attached proteins (P) and Western blotted. (A and B) High-salt washes do not remove Ply from the cell surface. (C) Urea cannot release Ply from the cell surface. Neither Na2CO3 nor DTT can release Ply from the cell surface. (D) SDS washes do remove Ply from the cell surface.
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FIG. 7. Ply localization in a lytA background. Fractionation and Western blot analysis of a lytA mutant strain. Ply is found in the cell wall fraction. Sup, culture supernatant; CW, cell wall; Prt, protoplast.
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Initially we detected hemolytic activity on washed S. pneumoniae cells, and since these cells were intact, we hypothesized that there might be a surface-exposed pool of Ply. To test this hypothesis, we performed two experiments: one was to test whole cells in an acapsular background to see if the hemolytic activity was lost in the absence of capsule, and the other was to fractionate the cells into cell wall and protoplast components and measure each fraction's hemolytic titer. The acapsular strain yielded the same surface hemolytic activity as its isogenic encapsulated strain, which indicated that the putative surface-exposed Ply was not located within or trapped beneath the capsule. When we performed hemolytic assays on cell wall and protoplast fractions, we discovered that the cell wall contained most of the cellular hemolytic activity, indicating a cell wall-localized pool of Ply.
Western blotting supported the notion that there is a cell wall-localized pool of Ply. Cytoplasmic contamination of the cell wall fraction was ruled out by probing the same blot with antibody to a cytoplasmic protein, CodY. CodY was found only in the protoplast lanes and never in the cell wall fraction, indicating that no cytoplasmic spillover occurred in the fractionation process. We confirmed Ply's cell surface localization by an independent assay for accessibility to extracellular proteolysis. Proteinase K treatment resulted in the rapid and complete digestion of cell wall-localized Ply while not affecting intracellular pools of Ply or CodY. Thus, we conclude that a pool of surface-accessible Ply is present within the cell wall compartment of S. pneumoniae.
Although the serotype designation of S. pneumoniae refers to the makeup of the capsule, different strains can be up to 10% different in genome content from each other. It is therefore important to determine whether or not any given phenotype is general or strain specific. We analyzed clinical isolates representing 16 additional serotypes for Ply subcellular localization. In all 16 additional isolates, we found Ply in the cell wall, indicating that cell wall-localized Ply is a general phenomenon.
In addition to lacking a secretion signal, Ply lacks all known cell wall anchoring motifs. We probed the chemical nature of the attachment of Ply to the cell wall by trying to release Ply with various compounds that should disrupt ionic interactions, thioester bonds, disulfide bonds, or hydrophobic interactions or that denature proteins. Of the types of attachments considered, only a hydrophobic interaction with a cell wall component was supported, since the detergent SDS could release Ply into the supernatant. Thus, we hypothesize that Ply is noncovalently linked to the cell wall. This hypothesis is supported by our observation that after cell wall digestion, Ply resolves at its expected molecular mass of 53 kDa. If Ply were covalently linked to another protein which was itself attached to the cell wall or to a large unit of cell wall produced by mutanolysin and lysozyme cleavage, we would expect Ply to run at a molecular mass higher than what its sequence predicts.
Although we have shown the stable attachment of Ply to the cell wall in vitro, Ply presumably must be released from the bacterial cell in order to function in vivo. The mechanism by which Ply is released from the cell wall in the host has yet to be determined. It is possible that there is a host-derived signal that serves as a trigger to release Ply or that host contact triggers Ply release. Alternatively, the cell wall composition of S. pneumoniae may be different in vivo such that Ply is not sequestered in the cell wall but is instead released from it.
Virulence studies with lytA mutant strains having the same attenuated virulence as ply mutant strains in animal models of infection have been interpreted as Ply release and autolysis being synonymous, adding support to the autolysin-dependent release of Ply model (19). However, in certain mouse strains that are highly susceptible to S. pneumoniae infection, the phenotypes of lytA and ply mutants can be separated (3). We show here that Ply localizes to the cell wall in vitro in a lytA mutant strain, challenging the model of autolysis-dependent release of Ply and supporting the model of autolysis-independent release of Ply. However, it is possible that lytA mutant strains fail to either properly express or localize Ply in vivo.
This study does not address the mechanism by which Ply is transported across the cytoplasmic membrane of S. pneumoniae. There are several examples of streptococcal proteins that are exported and localized to the cell wall yet do not contain a signal peptide or a cell wall anchor motif. Among them are enolase (5, 18) and streptococcal surface GAPDH (glyceraldehyde-3-phosphate dehydrogenase) (17). The mechanism for the export of these proteins is not known. Thus, Ply may fall into a potentially large class of signal peptide-lacking proteins that are exported across the cell membrane and attached to the cell wall through novel mechanisms.
We thank the Camilli laboratory for much critical feedback on this study.
Published ahead of print on 23 January 2009. ![]()
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