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Journal of Bacteriology, April 2009, p. 2851-2863, Vol. 191, No. 8
0021-9193/09/$08.00+0 doi:10.1128/JB.01406-08
Copyright © 2009, American Society for Microbiology. All Rights Reserved.

Poh-Choo Pang,2
Gavin J. Horsburgh,1
Silvia Viches,3
Markus Wilhelms,3
Juan M. Tomás,3
Anne Dell,2 and
Jonathan G. Shaw1*
Unit of Infection and Immunity, School of Medicine and Biomedical Sciences, University of Sheffield, Sheffield S10 2RX, United Kingdom,1 Division of Molecular Biosciences, Faculty of Natural Sciences, Imperial College London, London SW7 2AY, United Kingdom,2 Departamento Microbiología, Facultad Biología, Universidad Barcelona, Diagonal 645, 08071 Barcelona, Spain3
Received 7 October 2008/ Accepted 2 February 2009
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Previously, we showed that transposon mutations in the flm locus of A. caviae greatly reduced adherence of this organism to the human epithelial cell line HEp-2. In addition, mutation of this locus caused losses of motility, flagella, and the LPS O-antigen (12). In A. caviae Sch3N the flmA and flmB genes were clustered together in a locus with neuA, flmD, and neuB. All of these genes appeared to encode proteins associated with polysaccharide biosynthesis. Only flmA and flmB were found in the other Aeromonas strains investigated, such as Aeromonas hydrophila AH-3 (12). However, recently, the flmD, neuB, and neuA genes have been reported to be present in A. hydrophila AH-3 (4). Mutation of the A. hydrophila AH-3 flmA, flmB, flmD, neuA, and neuB genes affected only motility and flagellar expression and did not cause any alteration in the LPS (4, 12). This suggested that the flm gene products in A. caviae have two roles, a role in the biosynthesis of the LPS O-antigen and a role in flagellar assembly.
The orthologues of the flm genes were originally reported to be involved in flagellar assembly in Caulobacter crescentus, possibly through glycosylation of the flagellin or other flagellar proteins (23). Moreover, as observed for A. hydrophila AH-3, mutation of the C. crescentus flm genes did not result in any LPS defects. More recently, there have been a number of reports describing related loci in several bacterial pathogens that have associated the orthologous gene products with glycosylation of proteins important in pathogenesis, such as flagella, pili, and adhesins (33). There are similar genetic localizations and arrangements of these glycosylation genes in several bacterial species, such as Campylobacter jejuni, Helicobacter pylori, and C. crescentus (16, 33). A number of the related glycosylation gene products have been shown to play a role in the biosynthesis of a nine-carbon sugar related to sialic acid (Neu5Ac) called pseudaminic acid (Pse5Ac7Ac) that is present on the flagellins of C. jejuni and H. pylori (11, 37, 43). Our laboratory and other laboratories have also shown that both the polar flagellins of A. caviae are glycosylated with Pse5Ac7Ac. It has been suggested that the flm gene cluster plays a role in this process (10, 33, 34).
In this study, we describe a genetic island in A. caviae that contains the genes required for biosynthesis of the sugar Pse5Ac7Ac, which has been shown to be present both in the LPS O-antigen and on the polar flagellins.
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TABLE 1. Bacterial strains and plasmids used in this study
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Motility assay. Freshly grown bacterial colonies were transferred with a sterile toothpick into the center of plates containing motility agar (1% tryptone, 0.5% NaCl, 0.3% agar). The plates were incubated face up at 37°C for 14 to 24 h, and motility was assessed by examining the migration of bacteria through the agar from the center toward the periphery of the plate.
LPS extraction and PAGE analysis. LPS was purified and detected as described previously (12).
General DNA methods. DNA restriction endonucleases, T4 DNA ligase, E. coli DNA polymerase (Klenow fragment), and alkaline phosphatase were used as recommended by the suppliers.
Nucleotide sequencing and sequence analysis. Double-stranded DNA sequencing was performed by using the Sanger dideoxy chain termination method with an ABI Prism dye terminator cycle sequencing kit (Perkin-Elmer). DNA fragments were ligated into pUC19 and sequenced using an ABI Prism 377 DNA sequencer (Perkin-Elmer Corporation). The M13 universal primers were employed to sequence the ends of the DNA inserts. Following the first sequencing reaction and whenever required, primers were designed until the inserts' sequences were complete. Primers used for DNA sequencing were purchased from Eurofins. For chromosomal walking to extend the sequence into flanking regions, direct genomic sequencing was used. Custom 24-mer primers were designed for a known nucleotide sequence and were used with sheared A. caviae genomic DNA in a 99-cycle polymerase reaction using the BigDye Terminator mixture according to the manufacturer's instructions (PE-Applied Biosystems). The DNA sequence was translated in all six frames and analyzed as previously described (34).
Construction of defined insertion mutants.
Mutants were created by insertion of the Tn5-derived kanamycin resistance cartridge (nptII) from pUC4-KIXX (Pharmacia). This cartridge contains an outward-reading promoter that drives the transcription of downstream genes when it is inserted in the correct orientation. For each mutant the 1.4-kb SmaI-digested kanamycin resistance cartridge was inserted into a convenient restriction site in the middle of the gene. If a convenient site was not present, a site was created by spliced overlap extension PCR. Constructs containing the mutated genes were ligated into the suicide vector pKNG101 (17) and transferred into Aeromonas by conjugation. Conjugal transfer of the recombinant plasmids from E. coli S17-1
pir to A. caviae Sch3N was performed using a filter mating technique. Bacterial conjugation was allowed to proceed for 6 to 8 h at 37°C on sterile nitrocellulose filters (pore size, 0.45 µm) placed on an LB agar plate. Serial dilutions of the mating mixture were then plated on LB agar supplemented with nalidixic acid and kanamycin; the latter antibiotic was added in order to select for recombination. Colonies that were kanamycin resistant (Kmr) and streptomycin sensitive for pKNG101 derivatives (derivatives not likely to have retained the vector) were purified and probed for the kanamycin cartridge and the absence of any plasmid sequences by Southern hybridization. This demonstrated that a double recombination event and allelic exchange occurred.
Construction of lacZ transcriptional fusions. The mobilizable broad-host-range lacZ promoter probe plasmid pKAGb-2(–) was used in this study (K. Agnoli and M. Thomas, unpublished); this vector is a derivative of pTZ110 (41) that encodes chloramphenicol resistance. The promoter regions of both the A. caviae flaA and flaB genes were amplified by PCR, and the resulting fragments were directionally ligated separately into pKAGb-2(–), yielding plasmids pMJW400 and pMJW500, respectively. These plasmids were introduced separately by conjugation into wild-type strain Sch3N, the neuB mutant SMT166, and the lsg mutant SMT18. The activities of the flaA and flaB promoters were determined as a function of β-galactosidase activity. A. caviae cultures were grown in triplicate to an optical density at 600 nm of 0.5 to 0.8 and were then chilled on ice for 15 min. Duplicate assays were performed at 30°C using 200 µl of cells for each culture in a 1-ml (total volume) mixture following permeabilization of the cells with chloroform-SDS (28). The values are expressed in Miller units (MU) below.
Use of RT-PCR to study gene expression in the flm locus. To determine which of the flm genes were cotranscribed, reverse transcriptase PCR (RT-PCR) was used. Total RNA was isolated with TRIzol (Invitrogen) used according to the manufacturer's instructions from strain Sch3N grown overnight in BHIB. RNA was dissolved in pyrocarbonic acid diethyl ester-treated water and then treated with 20 U of RNase-free DNase for 30 min at 37°C. The DNase reaction was stopped by extracting the RNA with an equal volume of acid phenol (pH 4.3), followed by ethanol precipitation. The RNA concentration was determined spectrophotometrically. cDNA synthesis was carried out using an Access RT-PCR kit (Promega) with 1 to 3 µg of total RNA according to the manufacturer's instructions. The RNA was heat denatured for 10 min at 75°C and then at 48°C for 45 min to allow first-strand cDNA synthesis by avian myeloblastosis virus RT. The RNA-cDNA duplex and avian myeloblastosis virus RT were denatured at 96°C for 2 min. Second-strand synthesis and subsequent DNA amplification were carried out for 45 cycles with denaturation at 96°C for 45 s, primer annealing at 50°C for 45 s and primer extension at 72°C for 75 s. A final extension step consisting of one cycle at 72°C for 10 min was carried out. Table 2 shows the primers used, the regions amplified, and the expected DNA fragment sizes.
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TABLE 2. Primers used for RT-PCR
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Flagellin purification for MS. Polar flagellins were purified from strains grown in 1 liter of BHIB that were harvested by centrifugation, washed in 10 mM potassium phosphate buffer (pH 7.2), and harvested again. Each bacterial pellet was resuspended in 100 ml of 10 mM potassium phosphate buffer (pH 7.2), and the suspension was passed through an 18-gauge needle 20 times to remove the flagella. Bacteria were removed by two further rounds of centrifugation (10,000 x g), and the supernatant was decanted and subjected to ultracentrifugation for 1 h at 100,000 x g. The resulting flagellum pellet was resuspended in 1% SDS. Purified flagellins were run on 10% precast gels (Invitrogen) and stained using Novex colloidal blue reagent (Invitrogen), and the desired proteins were excised, lyophilized, and digested with trypsin (EC 3.4.21.4; Promega) overnight. Peptides were extracted from gel pieces and purified using a C-8 microtrap peptide cartridge (Presearch) in preparation for analysis by mass spectrometry (MS).
LPS purification and derivatization for MS. LPS were purified from strains grown in 1 liter of BHIB that were harvested by centrifugation, washed in 10 mM potassium phosphate buffer (pH 7.2), and harvested again. LPS was obtained after treatment with hot phenol, followed by incubation with DNase and then with proteinase K as described previously (12). The LPS was extracted with hot phenol once more before it was freeze-dried. For polysaccharide analysis, the core plus O-antigen was released from lipid A by mild hydrolysis of the LPS (1% acetic acid, 100°C, 2 h) and reduced (10 mg/ml NaBH4 in 2 M NH3, room temperature, 2 h). Reduced samples were loaded directly onto a Dowex H+ column [50W-X8 (H); 50 to 100 mesh; pretreated sequentially with 4 M HCl, water, and 5% acetic acid], and excess borates were removed by repeated addition (four times) of 10% acetic acid in methanol. Methylation using the sodium hydroxide procedure was performed, and the reaction products were purified using Sep-Pak C18 cartridges (Waters Corporation, Massachusetts) (8).
MALDI MS analysis. Matrix-assisted laser desorption ionization (MALDI) MS was performed using a PerSeptive Biosystems Voyager DE STR mass spectrometer (Foster City, CA) in the reflectron mode with delayed extraction. Methylated samples were dissolved in methanol, and 1-µl aliquots were loaded onto a metal plate with 1 µl of the matrix 2,5-dihydrobenzoic acid. Sequazyme peptide mass standards were used as external calibrants (Applied Biosystems, California).
Electrospray ionization MS analysis. Samples were dissolved in 30% acetonitrile-0.1% trifluoroacetic acid and sequenced by tandem MS (MS-MS) using a hybrid quadrupole orthogonal acceleration time of flight mass spectrometer (Micromass, United Kingdom). MS and MS-MS spectra were collected in the positive ion mode. The collision energies typically were 50 to 90 eV. Data were acquired and processed using Masslynx software (Micromass, United Kingdom). The instrument was precalibrated using a 1-pmol/µl solution of [Glu1]-fibrinopeptide B in acetonitrile-5% aqueous acetic acid (1:3, vol/vol).
Nucleotide sequence accession number. The nucleotide sequence of the genes described here has been deposited in the GenBank database under accession number AF126256.
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Sequence analysis extending upstream from the partial A. caviae flmA gene identified the rest of this gene in addition to two other ORFs, whereas downstream three further ORFs were revealed (Fig. 1A). Proteins homologous to the putative products of the ORFs were identified using the blastx program of the NCBI (Table 3). All of the ORFs with the exception of the last ORF were transcribed in the same direction. The predicted amino acid sequence encoded by the first ORF (tnp) showed homology to the sequences of enzymes belonging to the transposase 11 family. Downstream of tnp was a second ORF, which encoded a deduced amino acid sequence that had very high levels of identity to a series of RmlB proteins (Table 3). These proteins are dTDP-D-glucose-4,6-dehydratase enzymes that convert dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose, one of the steps in rhamnose biosynthesis (31). Following rmlB was the complete ORF representing flmA; this ORF encoded a protein which belongs to Pseudomonas aeruginosa WbpM subfamily 2 (3) and whose homologies we have described previously (12). The FlmA orthologue in H. pylori, FlaA1, was shown to have C6 dehydratase/C4 reductase activity specific for UDP-GlcNAc (7). In C. jejuni FlmA is called PseB and is involved in the Pse5Ac7Ac biosynthetic pathway converting UDP-GlcNAc to UDP-4-keto-4,6-dideoxy-β-L-AltNAc (25, 27, 40). Downstream of flmA were four ORFs that we have previously described, flmB, neuA, flmD, and neuB, and the deduced amino acid sequences encoded by these ORFs contained conserved domains of a pyridoxal-dependent aminotransferase for FlmB, a CMP-sugar synthetase for NeuA, and a sugar synthetase for NeuB. Closer analysis of the A. caviae FlmD protein showed that it belongs to a subfamily of these proteins that were larger than other proteins in the family, containing 505 amino acids rather than the 350 amino acids more typically seen. This indicated that the A. caviae protein has two domains, the characteristic glycosyltransferase domain that is present in the smaller proteins in the family and an RimL-like acetyltransferase domain that is found in another Flm protein, FlmH. It therefore appears that the A. caviae FlmD protein is a chimera of FlmD and FlmH, equivalent to the C. jejuni PseG and PseH proteins (Table 3 and see below).
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FIG. 1. Genetic organization of the A. caviae Sch3N (A), A. hydrophila AH-3 (B), and A. hydrophila ATCC 7966T (C) flm loci. Predicted ORFs were named after their homologues in other bacterial species and are indicated by open arrows, which indicate the direction of transcription. The same pattern in arrows indicates orthologous genes in the clusters. The ORF labeled "hypo" is a gene encoding a hypothetical protein. ORFs of interest in A. hydrophila ATCC 7966T are indicated by their gene locus numbers. Open triangles indicate the sites of insertion of the antibiotic resistance cassette, and the corresponding mutant designations are indicated above the triangles. The thin arrows indicate transcriptional units as determined by RT-PCR.
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TABLE 3. Properties of the putative ORFs of A. caviae Sch3N
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In a separate study we isolated the flm locus from A. hydrophila AH-3 through complementation of A. caviae mutants (4). The genetic organization of this locus is shown in Fig. 1B. Moreover, the genome sequence of A. hydrophila ATCC 7966T became available during this study (42), and the genetic organization of the flm locus of this strain is shown in Fig. 1C. The striking feature of comparisons of the flm loci of the three strains is the difference in the location within the chromosomes. In AH-3 the flm locus is downstream of the polar flagellin gene cluster (polar flagella region 2), whereas in ATCC 7966T it is downstream of the acyl coenzyme A synthetase genes luxC and luxE (Fig. 1C). In both A. hydrophila strains the flmA and flmB genes are located away from the other genes isolated in A. caviae (4, 42). Furthermore, the average G+C contents of both of the A. hydrophila loci are around 60%, which is typical for Aeromonas species.
Transcript mapping by RT-PCR. Complementation analysis of the polar transposon insertions in our previous study, along with the transcriptional direction of the genes and the small gaps between the end of one ORF and the start of the next ORF, suggested that the genes formed part of a polycistronic operon. Therefore, RT-PCR was employed to test whether each gene was cotranscribed with its immediate partner downstream. Primer pairs that overlapped different genes in the locus were designed for the 3' end of the upstream gene and near the 5' end of the downstream gene (Table 2). This was done in order to amplify the intergenic region between the two genes that would be expressed if the two genes were cotranscribed. RT-PCR products of the expected sizes were detected (data not shown) for every gene pair with the exception of neuA-flmD and neuB-lsg. This suggests that there are three transcripts in the locus, the first containing rmlB, flmA, flmB, and neuA, the second containing flmD and neuB, and the third containing lsg and lst (Fig. 1A).
Creation of insertional mutations in the A. caviae flm locus genes. To determine the roles of the identified genes in either motility or LPS biosynthesis or both, mutants were constructed for each gene, including the genes previously mutated by insertion of the polar transposon mini-Tn5Cm (12). A kanamycin resistance cassette was inserted in the same transcriptional orientation with respect to the target gene; the presence of an outward-reading promoter on the cassette ensures expression of downstream genes, thereby reducing any polar effects. However, such insertions may alter the regulation of the downstream genes. The construction of all mutants was verified by Southern hybridization of chromosomal DNA with the kanamycin cassette and vector probes (data not shown). The kanamycin cassette position and strain designations are shown in Fig. 1A.
The motility of the A. caviae mutant strains was assessed by examining static growth in BHIB and in semisolid motility plates. In liquid all mutant strains with the exception of the lsg mutant and the lst mutant grew at the bottom of the culture tube as a "loose" pellet and not as a turbid suspension like that seen for wild-type strain Sch3N (data not shown). This finding was supported by the inability of mutant cells (except for the lsg mutant and lst mutant cells) to swim in semisolid motility agar (Fig. 2A) and by the results of immunoblotting of the mutant whole-cell protein preparations for the polar flagellin proteins. In contrast to the parental strain, the lsg mutant, and the lst mutant preparations, the polar flagellins were not detected in the other mutant preparations, an observation suggesting that there was a loss of polar flagellin protein expression and thus that flagellum filaments were not present (Fig. 2B).
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FIG. 2. Analysis of motility, polar flagellin, and LPS for A. caviae Sch3N and isogenic mutants. (A) Motility as assessed by determining a strain's ability to swim in 0.3% semisolid motility agar. WT, wild type. (B) (Upper panel) Polar flagellin immunoblot of whole-cell proteins of A. caviae Sch3N (WT) and flm locus isogenic mutants. (Lower panel) Polar flagellin immunoblot of whole-cell proteins of flm locus isogenic mutants complemented with individual copies of the wild-type genes in pBBR1MCS (Table 1). The genes in which the knockout occurs are indicated above the lanes. Proteins were obtained from bacteria grown at 37°C in BHIB and were analyzed by SDS-PAGE (12%). They were transferred onto nitrocellulose membranes and immunoblotted with anti-polar flagellin antibodies (1:500). (C) Analysis of LPS isolated from A. caviae Sch3N (WT) and the flm locus isogenic mutants. (Upper panel) The genes in which the knockout occurs are indicated above the lanes. (Lower panel) flm locus isogenic mutants complemented with individual copies of the wild-type genes in pBBR1MCS (Table 1). LPS was extracted from bacteria grown at 37°C in BHIB, analyzed by SDS-PAGE (12%), and silver stained. The positions of LPS bands A and B are indicated on the left.
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Sequence analysis suggested that the A. caviae FlmD protein was in fact a chimeric protein equivalent to both FlmD and FlmH from A. hydrophila AH-3. To test this hypothesis, plasmid pACYC-FLA2, which contains the A. hydrophila AH-3 neuA-like, flmD, neuB-like genes (4), was introduced into the A. caviae flmD mutant. However, motility or the O-antigen LPS band was not restored by this complementing plasmid. But when the pLA-FLA2 cosmid (40 kb) carrying the A. hydrophila AH-3 neuA-like, flmD, and neuB-like genes in addition to flmH (4) was introduced into the flmD mutant, motility and the O-antigen band of the A. caviae LPS were fully restored (data not shown). The results of this complementation analysis support the bioinformatic data concerning the dual role of the A. caviae FlmD protein (i.e., that it has both FlmD activity and FlmH activity).
As the mutations in the A. caviae flm locus affect two structures associated with aeromonad pathogenicity, we determined the LD50s of two of the mutants in a mouse model. The LD50 of wild-type strain Sch3N in mice is 106.8 cells, whereas the LD50s of the flmD and neuA mutants were >108.0 cells, which is an increase of at least 1 log unit.
Complementation and characterization of the A. caviae neuA, neuB, and flmA genes. The A. caviae Sch3N neuA and neuB genes in pDI54 (12) were unable to complement their E. coli counterparts in E. coli mutant strains EV5 (neuA) and EV24 (neuB) (45). However, three neuB genes, termed neuB1 (Cj1141), neuB2 (Cj1327), and neuB3 (Cj1317), were shown to be present in the genome of C. jejuni NCTC 11168 (24). All three genes have previously been shown to encode Neu5Ac synthetase activity (24). In C. jejuni mutation of neuB1 resulted in loss of Neu5Ac from the lipooliogosaccharide of C. jejuni, whereas mutation of neuB2 was cryptic in strain NCTC 11168 but resulted in a reduction in the flagellin mass in strain G1 and mutation of neuB3 caused the cells to become aflagellate and nonmotile. NeuB3 has been shown to be involved in the biosynthesis of Pse5Ac7Ac, a nine-carbon sugar related to Neu5Ac (43), and has been designated PseI (25). Each of the C. jejuni neuB genes was cloned separately into the broad-host-range mobilizable vector pBBR1MCS (22) in an orientation that allowed expression from the lac promoter, and the constructs were then introduced into the A. caviae neuB mutant by conjugation. The vectors expressing neuB1 (pBRSMT800) and neuB2 (pBRSMT700) in trans were unable to complement the A. caviae neuB mutant, whereas when the plasmid expressing neuB3 (pBRSMT600) was introduced in trans into the A. caviae neuB mutant, the O-antigen band of the A. caviae LPS was produced (Fig. 3). On motility plates the wild-type strain had an average motility zone with a diameter of 16 ± 0.7 mm, which was significantly different (P = <0.01) from the diameters of the average motility zones of the neuB mutant SMT166 (2.1 ± 0.5 mm), SMT166 expressing C. jejuni neuB1 (1.9 ± 0.2 mm), and SMT166 expressing C. jejuni neuB2 (2.0 ± 0.3 mm). The SMT166 neuB mutant expressing C. jejuni neuB3 had a motility zone with a diameter of 12.8 ± 0.8 mm, which was significantly different (P = <0.01) from the results for the wild-type strain, the original mutant, and the complemented mutants, suggesting that there was only partial complementation for motility.
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FIG. 3. Analysis of motility and LPS isolated from the A. caviae neuB mutant SMT166 and derivative strains complemented with C. jejuni paralogues. (A) Motility as assessed by swimming in 0.3% semisolid motility agar for A. caviae Sch3N (WT), SMT166 (neuB mutant), and SMT166 containing pBBR1MCS expressing the C. jejuni paralogue neuB1, neuB2, or neuB3. (B) Analysis of LPS isolated from A. caviae Sch3N (WT), SMT166 (neuB mutant), and SMT166 containing pBBR1MCS expressing the C. jejuni paralogue neuB1, neuB2, or neuB3. LPS was extracted from bacteria grown at 37°C in BHIB, analyzed by SDS-PAGE (12%), and silver stained. The positions of LPS bands A and B are indicated on the left.
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-D-xylo-4-hexulose; the former compound is the substrate for the C. jejuni FlmB homologue PseC (39). To test whether the H. pylori FlaA1 protein could functionally complement the A. caviae FlmA protein, the flaA1 gene was amplified by PCR, sequenced, and cloned into the broad-host-range mobilizable vector pBBR1MCS in an orientation that allowed expression from the lac promoter. The resulting construct, pBRSMT1200, was then introduced into the A. caviae flmA mutant by conjugation; expression of flaA1 in trans rescued both flagellin expression and LPS O-antigen (Fig. 4). However, on motility plates the wild-type strain had a motility zone with an average diameter of 15.8 ± 0.8 mm, which was significantly different (P = <0.01) from the results for both the flmA mutant strain SMT137 (2.0 ± 0.3 mm) and the complemented mutant strain (13.6 ± 0.9 mm), again suggesting that in the complemented strain motility was partially rescued.
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FIG. 4. Analysis of motility and LPS isolated from the A. caviae flmA mutant SMT137 and derivative strains complemented with the H. pylori orthologue flaA1. (A) Analysis of LPS isolated from A. caviae Sch3N (WT), SMT137 (flmA mutant), and SMT137 containing pBBR1MCS expressing the H. pylori orthologue flaA1 (H.p. flaA1). LPS was extracted from bacteria grown at 37°C in BHIB, analyzed by SDS-PAGE (12%), and silver stained. The lower and upper LPS bands are bands A and B, respectively. (B) Motility as assessed by swimming in 0.3% semisolid motility agar for A. caviae Sch3N (WT), SMT137 (flmA mutant), and SMT137 containing pBBR1MCS expressing the H. pylori orthologue flaA1.
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FIG. 5. β-Galactosidase activities of the flaA-lacZ and flaB-lacZ fusion plasmids in Sch3N, the nonmotile neuB mutant SMT166, and the motile lsg mutant SMT18. β-Galactosidase activity was assayed for A. caviae Sch3N (WT), SMT166 (neuB mutant), and SMT18 (lsg mutant) and the derivative strains containing only the vector or the flaA-lacZ and flaB-lacZ fusion plasmids, as indicated below the bars. The activity was assayed using bacteria grown at 37°C in BHIB. Assays were carried out in triplicate, and the values are the means ± standard deviations.
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TABLE 4. Assignment of glycopeptides obtained from electrospray MS-MS analysis of the A. caviae FlaA flagellin subunit
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TABLE 5. Assignment of glycopeptides obtained from electrospray-MS-MS analysis of A. caviae FlaB flagellin subunit
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FIG. 6. MALDI MS analysis of permethylated LPS derived from A. caviae. Lipid A was released prior to derivatization and analysis of the core and O-antigen polysaccharide component. (A) Wild-type strain-derived core and O-antigen polysaccharide. Examples of signals corresponding to O-antigen repeat units differing by a Pse5Ac7Ac residue are labeled "Pse5Ac7Ac." (B) flmD mutant-derived core oligosaccharide. Signals corresponding to the O-antigen repeat and Pse5Ac7Ac were not observed.
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Two possible routes for bacterial protein glycosylation have been suggested. The first route utilizes and shares part of the LPS biosynthesis pathway, an example of which is pilus glycosylation in P. aeruginosa (5, 38). The second possible glycosylation route is distinct from the LPS pathway and is dedicated to only glycosylation, as seen for flagellin glycosylation in C. jejuni. In this and our previous studies we have shown that different strains in the same genus use two disparate pathways for flagellin glycosylation. For example, A. caviae Sch3N utilizes a shared LPS-glycosylation route, and A. hydrophila AH-3 uses a dedicated glycosylation system in which mutation affects flagellin expression but does not alter the strain's LPS (4, 12).
The dual functions of the A. caviae flm locus proteins encoded by flmA, flmB, neuA, flmD, and neuB suggested that they are involved in sugar biogenesis and that the sugars that they make are placed both on the flagella and in the LPS (Fig. 7); this was subsequently proved by MS, which demonstrated that mass increments both in flagellins and in the LPS O-antigen were consistent with Pse5Ac7Ac. Sugars for the LPS are linked to each other by glycosyltransferases, suggesting a role for Lst; these sugars are then transported across the cytoplasmic membrane by the Wzx-like flippase Lsg. However, similar Wzx-like proteins have also been shown to be involved in pilin glycosylation in Neisseria and P. aeruginosa (5) but do not appear to be involved in flagellin glycosylation. Although Aeromonas strains express type IV pili, it is not known whether they are glycosylated (19). Bacterial surface sugars need to be transported across the cytoplasmic membrane; this usually occurs by two main systems, based on the proteins Wzx-Wzy and Wzm-Wzt. Mutation of lsg affects only LPS biosynthesis, suggesting that flagellin glycosylation is Wzx independent. Therefore, flagellin glycosylation may be Wzm-Wzt dependent. However, our data support the more favored idea that glycosylation of the flagellar proteins occurs in the cytoplasm and the glycosylated flagellins are then exported to the cell surface for filament assembly and are not glycosylated once they are on the surface.
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FIG. 7. Hypothetical pathway for flagellin glycosylation and LPS modification in A. caviae Sch3N. The biosynthetic pathway to Pse5Ac7Ac is based on the predicted functions of the A. caviae proteins compared with those elucidated for C. jejuni and H. pylori proteins (25, 39). The activated form of Pse5Ac7Ac, CMP-Pse5Ac7Ac, is then either transferred onto the flagellin by an unknown mechanism or is predicted to be transferred onto a sugar-antigen carrier lipid (ACL) by Lst to create an LPS O-antigen unit, and this O-antigen unit is subsequently transported across the cytoplasmic membrane by Lsg.
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Based on enzymology, mutational analysis, and metabolomic studies, a pathway for the production of Pse5Ac7Ac has been proposed for C. jejuni (13, 25). Investigations of C. jejuni 81-176 have shown that the proteins essential for the production of Pse5Ac7Ac are PseB, PseC, PseF, PseG, PseH, and PseI, homologues of which are encoded by genes present in the A. caviae Sch3N flm locus. This suggests that this strain of A. caviae has acquired the minimum gene cluster required for the biosynthesis of Pse5Ac7Ac.
Activation of Pse5Ac7Ac through addition of CMP by the PseF homologue NeuA would result in CMP-Pse5Ac7Ac; this compound is probably the substrate of the A. caviae sialyltransferase-like protein Lst for addition of Pse5Ac7Ac to the LPS O-antigen (Fig. 7). As mutation of lst affects only LPS production and not flagella or motility, addition of Pse5Ac7Ac to the flagellin most likely involves another protein. One possible candidate is the Maf family of proteins (motility-associated factors), as the genes for these proteins are linked to, or found within, the flagellin and glycosylation loci of a number of bacteria, including H. pylori (HP0114), C. jejuni (Cj1318), A. hydrophila AH-3, and A. hydrophila ATCC 7966T (4, 18, 37, 42). Mutation of these genes results in a phenotype like that observed for the flm locus mutants, with the loss of motility and flagella (18, 36). Furthermore, a maf (Cj1318) orthologue has been found in A. caviae Sch3N directly downstream of the polar flagellin locus (J. G. Shaw, unpublished).
Mutation of genes in the flm locus in this study and our previous study has resulted in the absence of or a reduction in the amount of the flagellin subunit on whole-cell Western blots (4, 12). Here we showed that the expression from the putative flaA and flaB gene promoters transcriptionally fused to lacZ was reduced only for the flaB promoter in a neuB mutant background compared to the wild-type strain or the motile lsg mutant strain. The expression from the flaA promoter, although 10-fold lower, appeared to be the same in all the strain backgrounds tested. The small reduction in transcription of the flaB gene does not explain the large reduction in or absence of flagella on Western blots. However, this is similar to the situation in C. crescentus, where transcriptional and translational fusions to the fljK flagellin subunit gene were expressed at levels close to wild-type levels in flmA, flmD, and flmH mutant backgrounds (2). In H. pylori similar mutations greatly reduced the amount of detectable flagellin protein on Western blots (16, 37), but the flagellin genes were transcribed, as judged by RT-PCR (37). In A. hydrophila AH-3 mutations of flm locus genes stop the development of a functional flagellum filament and reduce the amount of flagellin present by around 50% (4). It therefore appears at this stage that in A. caviae Sch3N the flm genes are not part of the flagellar regulatory hierarchy, but at present the full regulatory hierarchy for the Aeromonas polar flagellum is not known. Furthermore, the pseB gene in Campylobacter has been shown to be coordinately regulated with flagellum genes (11).
Part of this work was supported by grants from the Wellcome Trust, the Bardhan Research and Education Trust, and Plan Nacional de I+D and by FIS grants from REIPI (Ministerio de Educación, Cienca y Deporte and Ministerio de Sanidad, Spain) and from the Generalitat de Catalunya. M.W. is a predoctoral fellow from the Ministerio de Educación, Cienca y Deporte. The Imperial College laboratory is supported by funding from the Biotechnology and Biological Sciences Research Council (grants B19088 and SF19107).
Published ahead of print on 13 February 2009. ![]()
Present address: Cancer Institute, The Paul O'Gorman Building, University College London, Gower Street, London WC1E 6BT, United Kingdom. ![]()
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