This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Armengaud, J.
Right arrow Articles by Wittich, R.-M.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Armengaud, J.
Right arrow Articles by Wittich, R.-M.

 Previous Article  |  Next Article 

Journal of Bacteriology, June 1999, p. 3452-3461, Vol. 181, No. 11
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.

A Functional 4-Hydroxysalicylate/Hydroxyquinol Degradative Pathway Gene Cluster Is Linked to the Initial Dibenzo-p-Dioxin Pathway Genes in Sphingomonas sp. Strain RW1

Jean Armengaud,* Kenneth N. Timmis, and Rolf-Michael Wittich

Division of Microbiology, GBF - National Research Centre for Biotechnology, D-38124 Braunschweig, Germany

Received 17 November 1998/Accepted 16 March 1999

The bacterium Sphingomonas sp. strain RW1 is able to use dibenzo-p-dioxin, dibenzofuran, and several hydroxylated derivatives as sole sources of carbon and energy. We have determined and analyzed the nucleic acid sequence of a 9,997-bp HindIII fragment downstream of cistrons dxnA1A2, which encode the dioxygenase component of the initial dioxygenase system of the corresponding catabolic pathways. This fragment contains 10 colinear open reading frames (ORFs), apparently organized in one compact operon. The enzymatic activities of some proteins encoded by these genes were analyzed in the strain RW1 and, after hyperexpression, in Escherichia coli. The first three ORFs of the locus, designated dxnC, ORF2, and fdx3, specify a protein with a low homology to bacterial siderophore receptors, a polypeptide representing no significant homology to known proteins, and a putative ferredoxin, respectively. dxnD encodes a 69-kDa phenol monooxygenase-like protein with activity for the turnover of 4-hydroxysalicylate, and dxnE codes for a 37-kDa protein whose sequence and activity are similar to those of known maleylacetate reductases. The following gene, dxnF, encodes a 33-kDa intradiol dioxygenase which efficiently cleaves hydroxyquinol, yielding maleylacetate, the ketoform of 3-hydroxy-cis,cis-muconate. The heteromeric protein encoded by dxnGH is a 3-oxoadipate succinyl coenzyme A (succinyl-CoA) transferase, whereas dxnI specifies a protein exhibiting marked homology to acetyl-CoA acetyltransferases (thiolases). The last ORF of the sequenced fragment codes for a putative transposase. DxnD, DxnF, DxnE, DxnGH, and DxnI (the activities of most of them have also been detected in strain RW1) thus form a complete 4-hydroxysalicylate/hydroxyquinol degradative pathway. A route for the mineralization of the growth substrates 3-hydroxydibenzofuran and 2-hydroxydibenzo-p-dioxin in Sphingomonas sp. strain RW1 thus suggests itself.


* Corresponding author. Present address: Institut de Biologie Structurale, IBS - LSMP, 41 avenue des Martyrs, F-38027 Grenoble Cedex 1, France. Phone: 33-4-76-88-30-37. Fax: 33-4-76-88-54-94. E-mail: jean.armengaud{at}ibs.fr.


Journal of Bacteriology, June 1999, p. 3452-3461, Vol. 181, No. 11
0021-9193/99/$04.00+0
Copyright © 1999, American Society for Microbiology. All rights reserved.



This article has been cited by other articles:

  • Perez-Pantoja, D., Donoso, R. A., Sanchez, M. A., Gonzalez, B. (2009). Genuine genetic redundancy in maleylacetate-reductase-encoding genes involved in degradation of haloaromatic compounds by Cupriavidus necator JMP134. Microbiology 155: 3641-3651 [Abstract] [Full Text]  
  • Moonen, M. J. H., Kamerbeek, N. M., Westphal, A. H., Boeren, S. A., Janssen, D. B., Fraaije, M. W., van Berkel, W. J. H. (2008). Elucidation of the 4-Hydroxyacetophenone Catabolic Pathway in Pseudomonas fluorescens ACB. J. Bacteriol. 190: 5190-5198 [Abstract] [Full Text]  
  • Moonen, M. J. H., Synowsky, S. A., van den Berg, W. A. M., Westphal, A. H., Heck, A. J. R., van den Heuvel, R. H. H., Fraaije, M. W., van Berkel, W. J. H. (2008). Hydroquinone Dioxygenase from Pseudomonas fluorescens ACB: a Novel Member of the Family of Nonheme-Iron(II)-Dependent Dioxygenases. J. Bacteriol. 190: 5199-5209 [Abstract] [Full Text]  
  • Hristova, K. R., Schmidt, R., Chakicherla, A. Y., Legler, T. C., Wu, J., Chain, P. S., Scow, K. M., Kane, S. R. (2007). Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol. Appl. Environ. Microbiol. 73: 7347-7357 [Abstract] [Full Text]  
  • van Hellemond, E. W., Janssen, D. B., Fraaije, M. W. (2007). Discovery of a Novel Styrene Monooxygenase Originating from the Metagenome. Appl. Environ. Microbiol. 73: 5832-5839 [Abstract] [Full Text]  
  • Seah, S. Y. K., Ke, J., Denis, G., Horsman, G. P., Fortin, P. D., Whiting, C. J., Eltis, L. D. (2007). Characterization of a C--C Bond Hydrolase from Sphingomonas wittichii RW1 with Novel Specificities towards Polychlorinated Biphenyl Metabolites. J. Bacteriol. 189: 4038-4045 [Abstract] [Full Text]  
  • Yoshida, M., Oikawa, T., Obata, H., Abe, K., Mihara, H., Esaki, N. (2007). Biochemical and Genetic Analysis of the {gamma}-Resorcylate (2,6-Dihydroxybenzoate) Catabolic Pathway in Rhizobium sp. Strain MTP-10005: Identification and Functional Analysis of Its Gene Cluster. J. Bacteriol. 189: 1573-1581 [Abstract] [Full Text]  
  • Huang, Y., Zhao, K.-X., Shen, X.-H., Chaudhry, M. T., Jiang, C.-Y., Liu, S.-J. (2006). Genetic Characterization of the Resorcinol Catabolic Pathway in Corynebacterium glutamicum. Appl. Environ. Microbiol. 72: 7238-7245 [Abstract] [Full Text]  
  • Nordin, K., Unell, M., Jansson, J. K. (2005). Novel 4-Chlorophenol Degradation Gene Cluster and Degradation Route via Hydroxyquinol in Arthrobacter chlorophenolicus A6. Appl. Environ. Microbiol. 71: 6538-6544 [Abstract] [Full Text]  
  • Ferraroni, M., Seifert, J., Travkin, V. M., Thiel, M., Kaschabek, S., Scozzafava, A., Golovleva, L., Schlomann, M., Briganti, F. (2005). Crystal Structure of the Hydroxyquinol 1,2-Dioxygenase from Nocardioides simplex 3E, a Key Enzyme Involved in Polychlorinated Aromatics Biodegradation. J. Biol. Chem. 280: 21144-21154 [Abstract] [Full Text]  
  • Yoshida, M., Fukuhara, N., Oikawa, T. (2004). Thermophilic, Reversible {gamma}-Resorcylate Decarboxylase from Rhizobium sp. Strain MTP-10005: Purification, Molecular Characterization, and Expression. J. Bacteriol. 186: 6855-6863 [Abstract] [Full Text]  
  • Muller, T. A., Byrde, S. M., Werlen, C., van der Meer, J. R., Kohler, H.-P. E. (2004). Genetic Analysis of Phenoxyalkanoic Acid Degradation in Sphingomonas herbicidovorans MH. Appl. Environ. Microbiol. 70: 6066-6075 [Abstract] [Full Text]  
  • Kitagawa, W., Kimura, N., Kamagata, Y. (2004). A Novel p-Nitrophenol Degradation Gene Cluster from a Gram-Positive Bacterium, Rhodococcus opacus SAO101. J. Bacteriol. 186: 4894-4902 [Abstract] [Full Text]  
  • Seibert, V., Thiel, M., Hinner, I.-S., Schlomann, M. (2004). Characterization of a gene cluster encoding the maleylacetate reductase from Ralstonia eutropha 335T, an enzyme recruited for growth with 4-fluorobenzoate. Microbiology 150: 463-472 [Abstract] [Full Text]  
  • Johnson, G. R., Jain, R. K., Spain, J. C. (2002). Origins of the 2,4-Dinitrotoluene Pathway. J. Bacteriol. 184: 4219-4232 [Abstract] [Full Text]  
  • Louie, T. M., Webster, C. M., Xun, L. (2002). Genetic and Biochemical Characterization of a 2,4,6-Trichlorophenol Degradation Pathway in Ralstonia eutropha JMP134. J. Bacteriol. 184: 3492-3500 [Abstract] [Full Text]  
  • Kaschabek, S. R., Kuhn, B., Muller, D., Schmidt, E., Reineke, W. (2002). Degradation of Aromatics and Chloroaromatics by Pseudomonas sp. Strain B13: Purification and Characterization of 3-Oxoadipate:Succinyl-Coenzyme A (CoA) Transferase and 3-Oxoadipyl-CoA Thiolase. J. Bacteriol. 184: 207-215 [Abstract] [Full Text]  
  • Gobel, M., Kassel-Cati, K., Schmidt, E., Reineke, W. (2002). Degradation of Aromatics and Chloroaromatics by Pseudomonas sp. Strain B13: Cloning, Characterization, and Analysis of Sequences Encoding 3-Oxoadipate:Succinyl-Coenzyme A (CoA) Transferase and 3-Oxoadipyl-CoA Thiolase. J. Bacteriol. 184: 216-223 [Abstract] [Full Text]  
  • Habe, H., Chung, J.-S., Lee, J.-H., Kasuga, K., Yoshida, T., Nojiri, H., Omori, T. (2001). Degradation of Chlorinated Dibenzofurans and Dibenzo-p-Dioxins by Two Types of Bacteria Having Angular Dioxygenases with Different Features. Appl. Environ. Microbiol. 67: 3610-3617 [Abstract] [Full Text]  
  • Potrawfke, T., Armengaud, J., Wittich, R.-M. (2001). Chlorocatechols Substituted at Positions 4 and 5 Are Substrates of the Broad-Spectrum Chlorocatechol 1,2-Dioxygenase of Pseudomonas chlororaphis RW71. J. Bacteriol. 183: 997-1011 [Abstract] [Full Text]  
  • Contzen, M., Stolz, A. (2000). Characterization of the Genes for Two Protocatechuate 3,4-Dioxygenases from the 4-Sulfocatechol-Degrading Bacterium Agrobacterium radiobacter Strain S2. J. Bacteriol. 182: 6123-6129 [Abstract] [Full Text]  
  • Armengaud, J., Gaillard, J., Timmis, K. N. (2000). A Second [2Fe-2S] Ferredoxin from Sphingomonas sp. Strain RW1 Can Function as an Electron Donor for the Dioxin Dioxygenase. J. Bacteriol. 182: 2238-2244 [Abstract] [Full Text]