This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow Alert me when this article is cited
Right arrow Alert me if a correction is posted
Services
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowReprints and Permissions
Right arrow Copyright Information
Right arrow Books from ASM Press
Right arrow MicrobeWorld
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Tamaru, Y.
Right arrow Articles by Doi, R. H.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Tamaru, Y.
Right arrow Articles by Doi, R. H.

 Previous Article  |  Next Article 

Journal of Bacteriology, October 2000, p. 5906-5910, Vol. 182, No. 20
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.

A Large Gene Cluster for the Clostridium cellulovorans Cellulosome

Yutaka Tamaru,1 Shuichi Karita,2 Atef Ibrahim,3 Helen Chan,1 and Roy H. Doi1,*

Section of Molecular and Cellular Biology, University of California, Davis, California 956161; Center for Molecular Biology and Genetics, Mie University, Tsu, Japan2; and Biotechnology and Genetic Engineering Institute, Menoufiya University, Sadat City, Egypt3

Received 6 March 2000/Accepted 14 July 2000

A large gene cluster for the Clostridium cellulovorans cellulosome has been cloned and sequenced upstream and downstream of the cbpA and exgS genes (C.-C. Liu and R. H. Doi, Gene 211:39-47, 1998). Gene walking revealed that the engL gene cluster (Y. Tamaru and R. H. Doi, J. Bacteriol. 182:244-247, 2000) was located downstream of the cbpA-exgS genes. Further DNA sequencing revealed that this cluster contains the genes for the scaffolding protein CbpA, the exoglucanase ExgS, several endoglucanases of family 9, the mannanase ManA, and the hydrophobic protein HbpA containing a surface layer homology domain and a hydrophobic (or cohesin) domain. The sequence of the clustered genes is cbpA-exgS-engH-engK-hbpA-engL-manA-engM-engN and is about 22 kb in length. The engN gene did not have a complete catalytic domain, indicating that engN is a truncated gene. This large gene cluster is flanked at the 5' end by a putative noncellulosomal operon consisting of nifV-orf1-sigX-regA and at the 3' end by noncellulosomal genes with homology to transposase (trp) and malate permease (mle). Since gene clusters for the cellulosome are also found in C. cellulolyticum and C. josui, they seem to be typical of mesophilic clostridia, indicating that the large gene clusters may arise from a common ancestor with some evolutionary modifications.


* Corresponding author. Mailing address: Section of Molecular and Cellular Biology, University of California, Davis, CA 95616. Phone: (530) 752-3191. Fax: (530) 752-3085. E-mail: rhdoi{at}ucdavis.edu.


Journal of Bacteriology, October 2000, p. 5906-5910, Vol. 182, No. 20
0021-9193/00/$04.00+0
Copyright © 2000, American Society for Microbiology. All rights reserved.



This article has been cited by other articles:

  • Matsuoka, S., Yukawa, H., Inui, M., Doi, R. H. (2007). Synergistic Interaction of Clostridium cellulovorans Cellulosomal Cellulases and HbpA. J. Bacteriol. 189: 7190-7194 [Abstract] [Full Text]  
  • Jun, H.-S., Qi, M., Gong, J., Egbosimba, E. E., Forsberg, C. W. (2007). Outer Membrane Proteins of Fibrobacter succinogenes with Potential Roles in Adhesion to Cellulose and in Cellulose Digestion. J. Bacteriol. 189: 6806-6815 [Abstract] [Full Text]  
  • Stevenson, D. M., Weimer, P. J. (2005). Expression of 17 Genes in Clostridium thermocellum ATCC 27405 during Fermentation of Cellulose or Cellobiose in Continuous Culture. Appl. Environ. Microbiol. 71: 4672-4678 [Abstract] [Full Text]  
  • Han, S. O., Yukawa, H., Inui, M., Doi, R. H. (2005). Molecular Cloning and Transcriptional and Expression Analysis of engO, Encoding a New Noncellulosomal Family 9 Enzyme, from Clostridium cellulovorans. J. Bacteriol. 187: 4884-4889 [Abstract] [Full Text]  
  • Koukiekolo, R., Cho, H.-Y., Kosugi, A., Inui, M., Yukawa, H., Doi, R. H. (2005). Degradation of Corn Fiber by Clostridium cellulovorans Cellulases and Hemicellulases and Contribution of Scaffolding Protein CbpA. Appl. Environ. Microbiol. 71: 3504-3511 [Abstract] [Full Text]  
  • Han, S. O., Yukawa, H., Inui, M., Doi, R. H. (2005). Effect of carbon source on the cellulosomal subpopulations of Clostridium cellulovorans. Microbiology 151: 1491-1497 [Abstract] [Full Text]  
  • Demain, A. L., Newcomb, M., Wu, J. H. D. (2005). Cellulase, Clostridia, and Ethanol. Microbiol. Mol. Biol. Rev. 69: 124-154 [Abstract] [Full Text]  
  • Han, S. O., Yukawa, H., Inui, M., Doi, R. H. (2004). Isolation and Expression of the xynB Gene and Its Product, XynB, a Consistent Component of the Clostridium cellulovorans Cellulosome. J. Bacteriol. 186: 8347-8355 [Abstract] [Full Text]  
  • Kosugi, A., Amano, Y., Murashima, K., Doi, R. H. (2004). Hydrophilic Domains of Scaffolding Protein CbpA Promote Glycosyl Hydrolase Activity and Localization of Cellulosomes to the Cell Surface of Clostridium cellulovorans. J. Bacteriol. 186: 6351-6359 [Abstract] [Full Text]  
  • Cho, H.-Y., Yukawa, H., Inui, M., Doi, R. H., Wong, S.-L. (2004). Production of Minicellulosomes from Clostridium cellulovorans in Bacillus subtilis WB800. Appl. Environ. Microbiol. 70: 5704-5707 [Abstract] [Full Text]  
  • Xu, Q., Barak, Y., Kenig, R., Shoham, Y., Bayer, E. A., Lamed, R. (2004). A Novel Acetivibrio cellulolyticus Anchoring Scaffoldin That Bears Divergent Cohesins. J. Bacteriol. 186: 5782-5789 [Abstract] [Full Text]  
  • Han, S. O., Cho, H.-Y., Yukawa, H., Inui, M., Doi, R. H. (2004). Regulation of Expression of Cellulosomes and Noncellulosomal (Hemi)Cellulolytic Enzymes in Clostridium cellulovorans during Growth on Different Carbon Sources. J. Bacteriol. 186: 4218-4227 [Abstract] [Full Text]  
  • Xu, Q., Bayer, E. A., Goldman, M., Kenig, R., Shoham, Y., Lamed, R. (2004). Architecture of the Bacteroides cellulosolvens Cellulosome: Description of a Cell Surface-Anchoring Scaffoldin and a Family 48 Cellulase. J. Bacteriol. 186: 968-977 [Abstract] [Full Text]  
  • Doi, R. H., Kosugi, A., Murashima, K., Tamaru, Y., Han, S. O. (2003). Cellulosomes from Mesophilic Bacteria. J. Bacteriol. 185: 5907-5914 [Full Text]  
  • Pages, S., Valette, O., Abdou, L., Belaich, A., Belaich, J.-P. (2003). A Rhamnogalacturonan Lyase in the Clostridium cellulolyticum Cellulosome. J. Bacteriol. 185: 4727-4733 [Abstract] [Full Text]  
  • Han, S. O., Yukawa, H., Inui, M., Doi, R. H. (2003). Transcription of Clostridium cellulovorans Cellulosomal Cellulase and Hemicellulase Genes. J. Bacteriol. 185: 2520-2527 [Abstract] [Full Text]  
  • Murashima, K., Kosugi, A., Doi, R. H. (2003). Synergistic Effects of Cellulosomal Xylanase and Cellulases from Clostridium cellulovorans on Plant Cell Wall Degradation. J. Bacteriol. 185: 1518-1524 [Abstract] [Full Text]  
  • Lopez-Contreras, A. M., Martens, A. A., Szijarto, N., Mooibroek, H., Claassen, P. A. M., van der Oost, J., de Vos, W. M. (2003). Production by Clostridium acetobutylicum ATCC 824 of CelG, a Cellulosomal Glycoside Hydrolase Belonging to Family 9. Appl. Environ. Microbiol. 69: 869-877 [Abstract] [Full Text]  
  • Murashima, K., Kosugi, A., Doi, R. H. (2002). Synergistic Effects on Crystalline Cellulose Degradation between Cellulosomal Cellulases from Clostridium cellulovorans. J. Bacteriol. 184: 5088-5095 [Abstract] [Full Text]  
  • Lynd, L. R., Weimer, P. J., van Zyl, W. H., Pretorius, I. S. (2002). Microbial Cellulose Utilization: Fundamentals and Biotechnology. Microbiol. Mol. Biol. Rev. 66: 506-577 [Abstract] [Full Text]  
  • Tamaru, Y., Ui, S., Murashima, K., Kosugi, A., Chan, H., Doi, R. H., Liu, B. (2002). Formation of Protoplasts from Cultured Tobacco Cells and Arabidopsis thaliana by the Action of Cellulosomes and Pectate Lyase from Clostridium cellulovorans. Appl. Environ. Microbiol. 68: 2614-2618 [Abstract] [Full Text]  
  • Murashima, K., Kosugi, A., Doi, R. H. (2002). Determination of Subunit Composition of Clostridium cellulovorans Cellulosomes That Degrade Plant Cell Walls. Appl. Environ. Microbiol. 68: 1610-1615 [Abstract] [Full Text]  
  • Kosugi, A., Murashima, K., Tamaru, Y., Doi, R. H. (2002). Cell-Surface-Anchoring Role of N-Terminal Surface Layer Homology Domains of Clostridium cellulovorans EngE. J. Bacteriol. 184: 884-888 [Abstract] [Full Text]  
  • Murashima, K., Chen, C.-L., Kosugi, A., Tamaru, Y., Doi, R. H., Wong, S.-L. (2002). Heterologous Production of Clostridium cellulovorans engB, Using Protease-Deficient Bacillus subtilis, and Preparation of Active Recombinant Cellulosomes. J. Bacteriol. 184: 76-81 [Abstract] [Full Text]  
  • Kosugi, A., Murashima, K., Doi, R. H. (2001). Characterization of Xylanolytic Enzymes in Clostridium cellulovorans: Expression of Xylanase Activity Dependent on Growth Substrates. J. Bacteriol. 183: 7037-7043 [Abstract] [Full Text]  
  • Nolling, J., Breton, G., Omelchenko, M. V., Makarova, K. S., Zeng, Q., Gibson, R., Lee, H. M., Dubois, J., Qiu, D., Hitti, J., GTC Sequencing Center Production, , Finishing, and Bioinformatics Teams, , Wolf, Y. I., Tatusov, R. L., Sabathe, F., Doucette-Stamm, L., Soucaille, P., Daly, M. J., Bennett, G. N., Koonin, E. V., Smith, D. R. (2001). Genome Sequence and Comparative Analysis of the Solvent-Producing Bacterium Clostridium acetobutylicum. J. Bacteriol. 183: 4823-4838 [Abstract] [Full Text]  
  • Podglajen, I., Breuil, J., Rohaut, A., Monsempes, C., Collatz, E. (2001). Multiple Mobile Promoter Regions for the Rare Carbapenem Resistance Gene of Bacteroides fragilis. J. Bacteriol. 183: 3531-3535 [Abstract] [Full Text]