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J. Bacteriol. doi:10.1128/JB.00710-06
Copyright (c) 2006, American Society for Microbiology and/or the Listed Authors/Institutions. All Rights Reserved.

Pirin regulates pyruvate catabolism through interaction with the pyruvate dehydrogenase E1 subunit and modulating pyruvate dehydrogenase activity

Po-Chi Soo, Yu-Tze Horng, Meng-Jiun Lai, Jun-Rong Wei, Shang-Chen Hsieh, Yung-Lin Chang, Yu-Huan Tsai, and Hsin-Chih Lai*

Department of Clinical Laboratory Sciences and Medical Biotechnology, National Taiwan University College of Medicine, Taipei, Taiwan, R.O.C; Department of Laboratory Medicine, National Taiwan University Hospital and National Taiwan University College of Medicine, Taipei, Taiwan, R.O.C; Department of Laboratory Medicine and Biotechnology, College of Medicine, Tzu Chi University, Hualien, Taiwan

* To whom correspondence should be addressed. Email: hclai{at}ha.mc.ntu.edu.tw.


   Abstract

The protein Pirin, which is involved in a variety of biological processes, is conserved from prokaryotic micro-organisms, fungi, and plants to mammals. It acts as a transcriptional cofactor or an apoptosis-related protein in mammals, and involves seed germination and seedling development in plants. In prokaryotes, while Pirin is stress-induced in cyanobacteria and may act as a quercetinase in Escherichia coli, the functions of Pirin orthologs remain mostly uncharacterized. We show that the Serratia marcescens pirinSm gene encodes an ortholog of Pirin protein. Protein pull-down and bacterial two-hybrid assays followed by SDS-PAGE and electrospray ionization (ESI) MASS-MASS analyses showed the pyruvate dehydrogenase (PDH) E1 subunit as a component interacting with PirinSm. Functional analyses showed that both PDH E1 subunit activity and PDH enzyme complex activity are inhibited by PirinSm in S. marcescens CH-1. The S. marcescens CH-1 pirinSm gene was subsequently mutated by insertion-deletion homologous recombination. Accordingly, the PDH E1, PDH enzyme complex activities and cellular ATP concentration increased up to 250%, 140%, and 220%, respectively, in the S. marcescens CH-1 pirinSm mutant. Concomitantly, the cellular NADH/NAD+ ratio increased in the pirinSm mutant, indicating increased tricarboxylic acid (TCA) cycle activity. Our results show that PirinSm plays a regulatory role in the process of pyruvate catabolism to acetyl-CoA through interaction with the PDH E1 subunit and inhibiting PDH enzyme complex activity in S. marcescens CH-1, and suggest PirinSm is an important protein involved in determining the direction of pyruvate metabolism to go towards either the TCA cycle or the fermentation pathways.




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