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J. Bacteriol. doi:10.1128/JB.01111-06
Copyright (c) 2006, American Society for Microbiology and/or the Listed Authors/Institutions. All Rights Reserved.

Abortive infection mechanisms and prophage sequences significantly influence the genetic make-up of emerging lytic lactococcal phages

Simon J. Labrie and Sylvain Moineau*

Département de biochimie et de microbiologie, Faculté des sciences et de génie, Groupe de recherche en écologie buccale, Faculté de médecine dentaire, Félix d'Hérelle Reference Center for Bacterial Viruses, Université Laval, Québec, Canada, G1K 7P4

* To whom correspondence should be addressed. Email: Sylvain.Moineau{at}bcm.ulaval.ca.


   Abstract

In this study, we demonstrate the remarkable genome plasticity of lytic lactococcal phages allowing them to rapidly adapt to the dynamic dairy environment. The lytic double-stranded DNA phage ul36 was used to sequentially infect a wild-type strain of Lactococcus lactis and two isogenic derivatives encoding two phage resistance mechanisms, namely AbiK and AbiT. Four phage mutants resistant to one or both Abi mechanisms were isolated. Comparative analysis of their complete genomes as well as morphological observations revealed that phage ul36 extensively evolved by large-scale homologous and non-homologous recombinations with the inducible prophage present in the host strain. One phage mutant has exchanged as much as 79% of its genome as compared to the core genome of ul36. Thus, natural phage defence mechanisms and prophage elements found in bacterial chromosomes are significantly contributing to the evolution of the lytic phage population.




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