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Contents: June 2005, Volume 187, Issue 12        Guest Commentaries        Genetics and Molecular Biology        Genomics and Proteomics        Bacteriophages, Transposons, and Plasmids        Physiology and Metabolism        Gene Regulation        Signal Transduction        Microbial Cell Biology        Molecular Biology of Pathogens        Plant Microbiology        Enzymes and Proteins        Population Genetics and Evolution        Structural Biology

Table of Contents

[Index by Author]

To see an article, click its [Full Text], [Abstract] or [PDF] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

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Guest Commentaries:

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Form and Function in Metal-Dependent Transcriptional Regulation: Dawn of the Enlightenment Christopher Rensing J. Bacteriol. June 2005 187: 3909-3912; [Full Text] [PDF] [Reprints and Permissions]

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Genetics and Molecular Biology:

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Deletion of the datA Site Does Not Affect Once-per-Cell-Cycle Timing but Induces Rifampin-Resistant Replication Morigen, Felipe Molina, and Kirsten Skarstad J. Bacteriol. June 2005 187: 3913-3920; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Temperature-Dependent Conjugative Transfer of R27: Role of Chromosome- and Plasmid-Encoded Hha and H-NS Proteins Núria Forns, Rosa C. Baños, Carlos Balsalobre, Antonio Juárez, and Cristina Madrid J. Bacteriol. June 2005 187: 3950-3959; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Gene Conversion Tracts Associated with Crossovers in Rhizobium etli Gustavo Santoyo, Jaime M. Martínez-Salazar, César Rodríguez, and David Romero J. Bacteriol. June 2005 187: 4116-4126; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Identification of the 4406 Regulatory Region, a Developmental Promoter of Myxococcus xanthus, and a DNA Segment Responsible for Chromosomal Position-Dependent Inhibition of Gene Expression Jennifer Loconto, Poorna Viswanathan, Scott J. Nowak, Monica Gloudemans, and Lee Kroos J. Bacteriol. June 2005 187: 4149-4162; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Defense against Protein Carbonylation by DnaK/DnaJ and Proteases of the Heat Shock Regulon Åsa Fredriksson, Manuel Ballesteros, Sam Dukan, and Thomas Nyström J. Bacteriol. June 2005 187: 4207-4213; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Genomics and Proteomics:

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Tricksy Business: Transcriptome Analysis Reveals the Involvement of Thioredoxin A in Redox Homeostasis, Oxidative Stress, Sulfur Metabolism, and Cellular Differentiation in Bacillus subtilis Wiep Klaas Smits, Jean-Yves F. Dubois, Sierd Bron, Jan Maarten van Dijl, and Oscar P. Kuipers J. Bacteriol. June 2005 187: 3921-3930; [Abstract] [Full Text] [PDF] [Supplemental material] [Reprints and Permissions]

Expression Levels Influence Ribosomal Frameshifting at the Tandem Rare Arginine Codons AGG_AGG and AGA_AGA in Escherichia coli Olga L. Gurvich, Pavel V. Baranov, Raymond F. Gesteland, and John F. Atkins J. Bacteriol. June 2005 187: 4023-4032; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Catabolism of Benzoate and Phthalate in Rhodococcus sp. Strain RHA1: Redundancies and Convergence Marianna A. Patrauchan, Christine Florizone, Manisha Dosanjh, William W. Mohn, Julian Davies, and Lindsay D. Eltis J. Bacteriol. June 2005 187: 4050-4063; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Regulation of Transcription in a Reduced Bacterial Genome: Nutrient-Provisioning Genes of the Obligate Symbiont Buchnera aphidicola Nancy A. Moran, Helen E. Dunbar, and Jennifer L. Wilcox J. Bacteriol. June 2005 187: 4229-4237; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Integrative Genomic, Transcriptional, and Proteomic Diversity in Natural Isolates of the Human Pathogen Burkholderia pseudomallei Keli Ou, Catherine Ong, Shze Yung Koh, Fiona Rodrigues, Siew Hoon Sim, Daniel Wong, Chia Huey Ooi, Kim Chong Ng, Hiroyuki Jikuya, Chin Chin Yau, Sou Yen Soon, Djohan Kesuma, May Ann Lee, and Patrick Tan J. Bacteriol. June 2005 187: 4276-4285; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Bacteriophages, Transposons, and Plasmids:

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Complete Nucleotide Sequence of the LE1 Prophage from the Spirochete Leptospira biflexa and Characterization of Its Replication and Partition Functions Pascale Bourhy, Lionel Frangeul, Elisabeth Couvé, Philippe Glaser, Isabelle Saint Girons, and Mathieu Picardeau J. Bacteriol. June 2005 187: 3931-3940; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Genomic Sequence and Receptor for the Vibrio cholerae Phage KSF-1: Evolutionary Divergence among Filamentous Vibriophages Mediating Lateral Gene Transfer Shah M. Faruque, Iftekhar Bin Naser, Kazutaka Fujihara, Pornphan Diraphat, Nityananda Chowdhury, M. Kamruzzaman, Firdausi Qadri, Shinji Yamasaki, A. N. Ghosh, and John J. Mekalanos J. Bacteriol. June 2005 187: 4095-4103; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Structural Characterization and Assembly of the Distal Tail Structure of the Temperate Lactococcal Bacteriophage TP901-1 Christina S. Vegge, Lone Brøndsted, Horst Neve, Stephen Mc Grath, Douwe van Sinderen, and Finn K. Vogensen J. Bacteriol. June 2005 187: 4187-4197; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Physiology and Metabolism:

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Mutations in Cytochrome Assembly and Periplasmic Redox Pathways in Bordetella pertussis Robert E. Feissner, Caroline S. Beckett, Jennifer A. Loughman, and Robert G. Kranz J. Bacteriol. June 2005 187: 3941-3949; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Membrane-Associated Maturation of the Heterotetrameric Nitrate Reductase of Thermus thermophilus Olga Zafra, Felipe Cava, Francis Blasco, Axel Magalon, and Jose Berenguer J. Bacteriol. June 2005 187: 3990-3996; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

A VicRK Signal Transduction System in Streptococcus mutans Affects gtfBCD, gbpB, and ftf Expression, Biofilm Formation, and Genetic Competence Development M. Dilani Senadheera, Bernard Guggenheim, Grace A. Spatafora, Yi-Chen Cathy Huang, Jison Choi, David C. I. Hung, Jennifer S. Treglown, Steven D. Goodman, Richard P. Ellen, and Dennis G. Cvitkovitch J. Bacteriol. June 2005 187: 4064-4076; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Overproduction of CcmG and CcmFHRc Fully Suppresses the c-Type Cytochrome Biogenesis Defect of Rhodobacter capsulatus CcmI-Null Mutants Carsten Sanders, Meenal Deshmukh, Doniel Astor, Robert G. Kranz, and Fevzi Daldal J. Bacteriol. June 2005 187: 4245-4256; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Gene Regulation:

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Transcriptional Regulation of the Flavohemoglobin Gene for Aerobic Nitric Oxide Detoxification by the Second Nitric Oxide-Responsive Regulator of Pseudomonas aeruginosa Hiroyuki Arai, Michiko Hayashi, Azusa Kuroi, Masaharu Ishii, and Yasuo Igarashi J. Bacteriol. June 2005 187: 3960-3968; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Regulation of Bacteriocin Production in Streptococcus mutans by the Quorum-Sensing System Required for Development of Genetic Competence Jan R. van der Ploeg J. Bacteriol. June 2005 187: 3980-3989; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Sulfate-Dependent Repression of Genes That Function in Organosulfur Metabolism in Bacillus subtilis Requires Spx Kyle N. Erwin, Shunji Nakano, and Peter Zuber J. Bacteriol. June 2005 187: 4042-4049; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

A Region of Bacillus subtilis CodY Protein Required for Interaction with DNA Pascale Joseph, Manoja Ratnayake-Lecamwasam, and Abraham L. Sonenshein J. Bacteriol. June 2005 187: 4127-4139; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

The Transcription Termination Factor Rho Is Essential and Autoregulated in Caulobacter crescentus Valéria C. S. Italiani and Marilis V. Marques J. Bacteriol. June 2005 187: 4290-4294; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Signal Transduction:

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Pneumococcal HtrA Protease Mediates Inhibition of Competence by the CiaRH Two-Component Signaling System M. E. Sebert, K. P. Patel, M. Plotnick, and J. N. Weiser J. Bacteriol. June 2005 187: 3969-3979; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Microbial Cell Biology:

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Peculiar Properties of DsbA in Its Export across the Escherichia coli Cytoplasmic Membrane Nobuyuki Shimohata, Yoshinori Akiyama, and Koreaki Ito J. Bacteriol. June 2005 187: 3997-4004; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

The Haloferax volcanii FtsY Homolog Is Critical for Haloarchaeal Growth but Does Not Require the A Domain Alex Haddad, R. Wesley Rose, and Mechthild Pohlschröder J. Bacteriol. June 2005 187: 4015-4022; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

A Second Outer-Core Region in Klebsiella pneumoniae Lipopolysaccharide Miguel Regué, Luis Izquierdo, Sandra Fresno, Núria Piqué, Maria Michela Corsaro, Teresa Naldi, Cristina De Castro, Dietmar Waidelich, Susana Merino, and Juan M. Tomás J. Bacteriol. June 2005 187: 4198-4206; [Abstract] [Full Text] [PDF] [Supplemental material] [Reprints and Permissions]

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Molecular Biology of Pathogens:

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Characterization of the Small Untranslated RNA RyhB and Its Regulon in Vibrio cholerae Brigid M. Davis, Mariam Quinones, Jason Pratt, Yanpeng Ding, and Matthew K. Waldor J. Bacteriol. June 2005 187: 4005-4014; [Abstract] [Full Text] [PDF] [Supplemental material] [Reprints and Permissions]

ClpXP Protease Controls Expression of the Type III Protein Secretion System through Regulation of RpoS and GrlR Levels in Enterohemorrhagic Escherichia coli Sunao Iyoda and Haruo Watanabe J. Bacteriol. June 2005 187: 4086-4094; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Requirement of the mymA Operon for Appropriate Cell Wall Ultrastructure and Persistence of Mycobacterium tuberculosis in the Spleens of Guinea Pigs Amit Singh, Radhika Gupta, R. A. Vishwakarma, P. R. Narayanan, C. N. Paramasivan, V. D. Ramanathan, and Anil K. Tyagi J. Bacteriol. June 2005 187: 4173-4186; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Plant Microbiology:

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Analysis of Pseudomonas putida KT2440 Gene Expression in the Maize Rhizosphere: In Vitro Expression Technology Capture and Identification of Root-Activated Promoters María Isabel Ramos-González, María Jesús Campos, and Juan L. Ramos J. Bacteriol. June 2005 187: 4033-4041; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Pseudomonas syringae Type III Chaperones ShcO1, ShcS1, and ShcS2 Facilitate Translocation of Their Cognate Effectors and Can Substitute for Each Other in the Secretion of HopO1-1 Ming Guo, Scott T. Chancey, Fang Tian, Zhengxiang Ge, Yashitola Jamir, and James R. Alfano J. Bacteriol. June 2005 187: 4257-4269; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Enzymes and Proteins:

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Regulation and Function of Cytochrome c' in Rhodobacter sphaeroides 2.4.3 Peter S. Choi, Vladimir M. Grigoryants, Hector D. Abruña, Charles P. Scholes, and James P. Shapleigh J. Bacteriol. June 2005 187: 4077-4085; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Characterization of GlaKP, a UDP-Galacturonic Acid C4-Epimerase from Klebsiella pneumoniae with Extended Substrate Specificity Emilisa Frirdich and Chris Whitfield J. Bacteriol. June 2005 187: 4104-4115; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Two Thimet Oligopeptidase-Like Pz Peptidases Produced by a Collagen- Degrading Thermophile, Geobacillus collagenovorans MO-1 Ryoma Miyake, Yasushi Shigeri, Yoshiro Tatsu, Noboru Yumoto, Midori Umekawa, Yoshiyuki Tsujimoto, Hiroshi Matsui, and Kunihiko Watanabe J. Bacteriol. June 2005 187: 4140-4148; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Mutagenesis at Two Distinct Phosphate-Binding Sites Unravels Their Differential Roles in Regulation of Rubisco Activation and Catalysis Yehouda Marcus, Hagit Altman-Gueta, Aliza Finkler, and Michael Gurevitz J. Bacteriol. June 2005 187: 4222-4228; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

A Phosphohexomutase from the Archaeon Sulfolobus solfataricus Is Covalently Modified by Phosphorylation on Serine W. Keith Ray, Sabrina M. Keith, Andrea M. DeSantis, Jeremy P. Hunt, Timothy J. Larson, Richard F. Helm, and Peter J. Kennelly J. Bacteriol. June 2005 187: 4270-4275; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Biochemical Characterization of a Prokaryotic Phenylalanine Ammonia Lyase Longkuan Xiang and Bradley S. Moore J. Bacteriol. June 2005 187: 4286-4289; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Population Genetics and Evolution:

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Evolution of Transcription Regulatory Genes Is Linked to Niche Specialization in the Bacterial Pathogen Streptococcus pyogenes Debra E. Bessen, Anand Manoharan, Feng Luo, John E. Wertz, and D. Ashley Robinson J. Bacteriol. June 2005 187: 4163-4172; [Abstract] [Full Text] [PDF] [Supplemental material] [Reprints and Permissions]

Evolutionary Changes of the flhDC Flagellar Master Operon in Shigella Strains Akira Tominaga, Ruiting Lan, and Peter R. Reeves J. Bacteriol. June 2005 187: 4295-4302; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

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Structural Biology:

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Crystal Structure of the Staphylococcus aureus pI258 CadC Cd(II)/Pb(II)/Zn(II)-Responsive Repressor Jun Ye, Ashoka Kandegedara, Philip Martin, and Barry P. Rosen J. Bacteriol. June 2005 187: 4214-4221; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

Crystal Structure of the "PhoU-Like" Phosphate Uptake Regulator from Aquifex aeolicus Vaheh Oganesyan, Natalia Oganesyan, Paul D. Adams, Jaru Jancarik, Hisao A. Yokota, Rosalind Kim, and Sung-Hou Kim J. Bacteriol. June 2005 187: 4238-4244; [Abstract] [Full Text] [PDF] [Reprints and Permissions]

To see an article, click its [Full Text] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.