Searching journal content for articles similar to Haake et al. 186 (9): 2818.

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  1. Cover image
    Research Article: Rpn (YhgA-Like) Proteins of Escherichia coli K-12 and Their Contribution to RecA-Independent Horizontal Transfer
    • Anthony W. Kingston,
    • Christine Ponkratz,
    • and Elisabeth A. Raleigh
    J. Bacteriol. April 2017; 199:7 17 e00787-16; Accepted manuscript posted online 17 January 2017 doi:10.1128/JB.00787-16
    ...sites for DNA polymerase, which can enable DNA joining by primer-template switching. KEYWORDS DNA damage conjugation evolutionary biology gene function genomic instability horizontal gene transfer illegitimate recombination protein function protein motif...
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  2. Cover image
    Research Article: Inactivation of Transcriptional Regulators during Within-Household Evolution of Escherichia coli
    • Dagmara I. Kisiela,
    • Matthew Radey,
    • Sandip Paul,
    • Stephen Porter,
    • Kseniya Polukhina,
    • Veronika Tchesnokova,
    • Sofiya Shevchenko,
    • Diana Chan,
    • Maliha Aziz,
    • Timothy J. Johnson,
    • Lance B. Price,
    • James R. Johnson,
    • and Evgeni V. Sokurenko
    J. Bacteriol. July 2017; 199:13 18 e00036-17; Accepted manuscript posted online 24 April 2017 doi:10.1128/JB.00036-17
    ...-term natural evolution. KEYWORDS E. coli adaptive mutation clonal evolution sepsis transcriptional regulator urinary tract infection INTRODUCTION In bacteria, adaptive diversification, the fundamental phenomenon underlying evolution, is driven by gene transfer or mutation. Studies involving the experimental...
  3. Cover image
    Research Article: The History of Bordetella pertussis Genome Evolution Includes Structural Rearrangement
    • Michael R. Weigand,
    • Yanhui Peng,
    • Vladimir Loparev,
    • Dhwani Batra,
    • Katherine E. Bowden,
    • Mark Burroughs,
    • Pamela K. Cassiday,
    • Jamie K. Davis,
    • Taccara Johnson,
    • Phalasy Juieng,
    • Kristen Knipe,
    • Marsenia H. Mathis,
    • Andrea M. Pruitt,
    • Lori Rowe,
    • Mili Sheth,
    • M. Lucia Tondella,
    • and Margaret M. Williams
    J. Bacteriol. April 2017; 199:8 15 e00806-16; Accepted manuscript posted online 6 February 2017 doi:10.1128/JB.00806-16
    ...). Briefly, genomic DNA libraries were prepared for PacBio sequencing using SMRTbell template prep kit 1.0 Bordetella pertussis Genome Structure Evolution Journal of Bacteriology April 2017 Volume 199 Issue 8 e00806-16 .asm.org 11 and polymerase binding kit P4, while Illumina libraries were prepared using...
  4. Cover image
    Articles: Chimeric Coupling Proteins Mediate Transfer of Heterologous Type IV Effectors through the Escherichia coli pKM101-Encoded Conjugation Machine
    • Neal Whitaker,
    • Trista M. Berry,
    • Nathan Rosenthal,
    • Jay E. Gordon,
    • Christian Gonzalez-Rivera,
    • Kathy B. Sheehan,
    • Hilary K. Truchan,
    • Lauren VieBrock,
    • Irene L. G. Newton,
    • Jason A. Carlyon,
    • and Peter J. Christie
    J. Bacteriol. October 2016 ; 198:19 18 2701-2718; Accepted manuscript posted online 18 July 2016 doi:10.1128/JB.00378-16
    ...ABSTRACT Bacterial type IV secretion systems (T4SSs) are composed of two major subfamilies, conjugation machines dedicated to DNA transfer and effector translocators for protein transfer. We show here that the Escherichia coli pKM101-encoded conjugation system, coupled with chimeric substrate receptors...
  5. Cover image
    Stand-alone EAL domain proteins form a distinct subclass of EAL proteins involved in regulation of cell motility and biofilm formation in enterobacteria
    • Youssef El Mouali,
    • Hyunhee Kim,
    • Irfan Ahmad,
    • Annelie Brauner,
    • Ying Liu,
    • Mikael Skurnik,
    • Michael Y. Galperin,
    • and Ute Römling
    J. Bacteriol. JB.00179-17; Accepted manuscript posted online 26 June 2017 doi:10.1128/JB.00179-17
    ...1324 in S. Typhimurium in upregulation of rdar biofilm formation also indicates 443 that these EAL-only proteins can readily acquire biological significance, when horizontally 444 transferred. Indeed, several of the EAL-only proteins of E. coli are found on plasmids (Fig. S4). An 445 additional group...
  6. Cover image
    Research Article: Transposase-Mediated Excision, Conjugative Transfer, and Diversity of ICE6013 Elements in Staphylococcus aureus
    • Emily A. Sansevere,
    • Xiao Luo,
    • Joo Youn Park,
    • Sunghyun Yoon,
    • Keun Seok Seo,
    • and D. Ashley Robinson
    J. Bacteriol. April 2017; 199:8 14 e00629-16; Accepted manuscript posted online 30 January 2017 doi:10.1128/JB.00629-16
    ...as well as Tn insertions at sites 1.4 kb to 50 kb upstream or downstream of the integration site were used as donors. No evidence for mobilization of chromosomal DNA was obtained (Table 1). Using the mock wild-type strain as a donor, ICE6013 was tested for its ability to transfer to a variety of S. aureus...
  7. Cover image
    Corrected Genome Annotations Reveal Gene Loss and Antibiotic Resistance as Drivers in the Fitness Evolution of Salmonella Typhimurium.
    • Sandip Paul,
    • Evgeni V. Sokurenko,
    • and Sujay Chattopadhyay
    J. Bacteriol. JB.00545-16; Accepted manuscript posted online 12 September 2016 doi:10.1128/JB.00545-16
    ...exclusively limited to gene loss and transfer of prophage DNA. Only non-phage chromosomal genes acquired after the emergence of the serovar are linked to the genomic islands harboring multi-drug resistance factors. Since the fitness factors could lead to increased virulence, this poses an important research...
  8. Cover image
    Polyvalent proteins: A pervasive theme in the inter-genomic biological conflicts of bacteriophages and conjugative elements
    • Lakshminarayan M. Iyer,
    • A. Maxwell Burroughs,
    • Swadha Anand,
    • Robson F. de Souza,
    • and L. Aravind
    J. Bacteriol. JB.00245-17; Accepted manuscript posted online 30 May 2017 doi:10.1128/JB.00245-17
    ...be grouped into five broad 89 categories: 1) DNA-processing and transfer proteins: these are primarily seen in conjugative transposons 90 and plasmids and are intimately involved in the mechanics of conjugation. The key protein here is a 91 relaxase with a catalytic domain of the rolling...
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  9. Cover image
    Articles: Agrobacterium tumefaciens ExoR Controls Acid Response Genes and Impacts Exopolysaccharide Synthesis, Horizontal Gene Transfer, and Virulence Gene Expression
    • Brynn C. Heckel,
    • Amelia D. Tomlinson,
    • Elise R. Morton,
    • Jeong-Hyeon Choi,
    • and Clay Fuqua
    J. Bacteriol. September 2014 ; 196:18 3221-3233; Accepted manuscript posted online 30 June 2014 doi:10.1128/JB.01751-14
    ...Agrobacterium tumefaciens ExoR Controls Acid Response Genes and Impacts Exopolysaccharide Synthesis, Horizontal Gene Transfer, and Virulence Gene Expression [] Brynn C Heckel Heckel, Brynn C Amelia Heckel, B.C Morton Elise Morton JeongHyeon Choi AmeliaD Tomlinson BrynnC Heckel Heckel, B Fuqua Clay...
  10. Cover image
    Meeting Reviews: Laboratory Evolution of Microbial Interactions in Bacterial Biofilms
    • Marivic Martin,
    • Theresa Hölscher,
    • Anna Dragoš,
    • Vaughn S. Cooper,
    • and Ákos T. Kovács
    J. Bacteriol. October 2016 ; 198:19 8 2564-2571; Accepted manuscript posted online 4 April 2016 doi:10.1128/JB.01018-15
    ...communities. It is unclear how social interactions shape biofilm evolution and how evolution in structured environments shift the balance between competition and mutualism. Long-term serial transfer experiments provide a key approach to fill this gap. Experimental evolution allows studying adaptation under...
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    July 2017, volume 199, issue 14
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